Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001057

Physical Location & Seq

Genomic Coordinates Forward (+)

26703966 .. 26705360

Gene Structure 1395 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G70810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 498 bp

ATGGAGGAACTTGTAGGGCTTCTGAGAATCCGAGTGAAGAGAGGGATCAATCTTGCTCAGCGAGACACTCTAAGCAGCGACCCTTTTGTTGTCATAACCATGGGATCACAGAAGCTGAAGACTCGTGTTGTGGAAAATAACTGCAACCCTGAGTGGAACGAGGAATTAACCCTTGCGTTAAGACATCCCGATGAACCTGTGAATCTGATAGTGTATGATAAAGATACATTCACATCGCACGACAAGATGGGAGATGCAAAGATAGATATTAAACCATTTCTGGAGGTTCACAAAATGGGTTTGCAAGAACTTCCAGATGGAACAGAGATCAAGAGAGTTGTGCCCAACAGAGAAAACTGTTTGGCTGAAGCGAGCAGTATCGTCTCCAATAATGGCAAAATCGTTCAGAACATGATTCTTCTGTTGAGGAATGTCGAATGCGGTGAGGTCGAGATTCAGCTTGAATGGATTGATATTCCAGGTTCTAGAGGGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005543 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0006810 GO:0006886 GO:0007275 GO:0008047 GO:0008104 GO:0008150 GO:0008289 GO:0009314 GO:0009416 GO:0009555 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009637 GO:0009638 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0010646 GO:0010647 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0023051 GO:0023056 GO:0030234 GO:0030695 GO:0032501 GO:0032502 GO:0033036 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0048046 GO:0048229 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0071944 GO:0098772 GO:1901419 GO:1901421 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

165

Amino Acids

18.66

Weight (kDa)

5.15

Isoelectric Point (pI)

39.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	6 - 93	8.5e-23	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001057)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70810 AT5G37740 AT5G37740
fragaria_vesca	FvH4_1g27320 FvH4_1g28670 FvH4_1g28680 FvH4_1g28690 FvH4_2g18820
malus_domestica	MD09G1278700.v1.1 MD09G1278800.v1.1 MD09G1278900.v1.1 MD09G1279000.v1.1 MD17G1260900.v1.1
prunus_persica	Prupe.3G162700_v2.0.a1 Prupe.3G162800_v2.0.a1 Prupe.3G162900_v2.0.a1 Prupe.3G162900_v2.0.a1
pyrus_communis	pycom09g17860 pycom09g17870 pycom09g17880 pycom09g17890 pycom17g26160
rosa_chinensis	RchiOBHm_Chr3g0492961 RchiOBHm_Chr3g0492971 RchiOBHm_Chr3g0492991
rosa_laevigata	RLG00000022734 RLG00000022736 RLG00000022737 RLG00000022739 RLG00000022740 RLG00000022741
rosa_multiflora	Rmu_co8406109.1_g000001 Rmu_sc0000395.1_g000015 Rmu_sc0000395.1_g000023 Rmu_sc0000395.1_g000029 Rmu_sc0008956.1_g000004 Rmu_sc0016690.1_g000001
rosa_roxburghii	Rroxscaffold_6G00391990 Rroxscaffold_6G00392000 Rroxscaffold_6G00392010
rosa_rugosa	Rorug03G0256700 Rorug03G0257800 Rorug03G0258000 Rorug03G0258400 Rorug03G0258500 Rorug03G0258500
rosa_samantha	Rh3AG306200 Rh3AG307300 Rh3AG307500 Rh3BG342700 Rh3BG342800 Rh3BG342900 Rh3CG340000 Rh3CG340200 Rh3DG342000 Rh3DG342200 Rh3DG342400
rosa_wichuraiana	Rw3G027020 Rw3G027030 Rw3G027040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	441
AclWI	GGATC	2 cut(s)	53, 112
AcuI	CTGAAG	2 cut(s)	137, 387
AgsI	TTSAA	1 cut(s)	464
AjnI	CCWGG	1 cut(s)	478
AluBI	AGCT	2 cut(s)	115, 460
AluI	AGCT	2 cut(s)	115, 460
Alw26I	GTCTC	2 cut(s)	57, 388
AlwI	GGATC	2 cut(s)	53, 112
AlwNI	CAGNNNCTG	1 cut(s)	115
ApeKI	GCWGC	1 cut(s)	75
AsuHPI	GGTGA	1 cut(s)	455
BaeGI	GKGCMC	1 cut(s)	345
BauI	CACGAG	1 cut(s)	123
BbsI	GAAGAC	1 cut(s)	125
BbvI	GCAGC	1 cut(s)	87
BccI	CCATC	2 cut(s)	241, 311
BciT130I	CCWGG	1 cut(s)	480
BcoDI	GTCTC	2 cut(s)	57, 388
BfaI	CTAG	1 cut(s)	486
BisI	GCNGC	1 cut(s)	76
BlpI	GCTNAGC	1 cut(s)	57
BlsI	GCNGC	1 cut(s)	77
Bme1390I	CCNGG	1 cut(s)	480
BmrFI	CCNGG	1 cut(s)	480
BmsI	GCATC	1 cut(s)	244
BpiI	GAAGAC	1 cut(s)	125
BpmI	CTGGAG	1 cut(s)	302
Bpu1102I	GCTNAGC	1 cut(s)	57
BsaJI	CCNNGG	1 cut(s)	99
BseBI	CCWGG	1 cut(s)	480
BseDI	CCNNGG	1 cut(s)	99
BseGI	GGATG	1 cut(s)	184
BseMII	CTCAG	3 cut(s)	14, 71, 141
BseSI	GKGCMC	1 cut(s)	345
BseXI	GCAGC	1 cut(s)	87
BsmAI	GTCTC	2 cut(s)	57, 388
BsmBI	CGTCTC	1 cut(s)	388
BsmI	GAATGC	1 cut(s)	443
Bsp1286I	GDGCHC	1 cut(s)	345
Bsp143I	GATC	3 cut(s)	45, 104, 327
Bsp1720I	GCTNAGC	1 cut(s)	57
Bsp19I	CCATGG	1 cut(s)	99
BspACI	CCGC	1 cut(s)	441
BspCNI	CTCAG	3 cut(s)	15, 70, 142
BspPI	GGATC	2 cut(s)	53, 112
BssECI	CCNNGG	1 cut(s)	99
BssMI	GATC	3 cut(s)	45, 104, 327
BssSI	CACGAG	1 cut(s)	123
BssT1I	CCWWGG	1 cut(s)	99
Bst2BI	CACGAG	1 cut(s)	123
Bst2UI	CCWGG	1 cut(s)	480
Bst4CI	ACNGT	1 cut(s)	359
Bst6I	CTCTTC	1 cut(s)	32
BstC8I	GCNNGC	1 cut(s)	373
BstDEI	CTNAG	4 cut(s)	23, 57, 71, 150
BstDSI	CCRYGG	1 cut(s)	99
BstF5I	GGATG	1 cut(s)	184
BstKTI	GATC	3 cut(s)	48, 107, 330
BstMAI	GTCTC	2 cut(s)	57, 388
BstMBI	GATC	3 cut(s)	45, 104, 327
BstNI	CCWGG	1 cut(s)	480
BstSCI	CCNGG	1 cut(s)	478
BstSLI	GKGCMC	1 cut(s)	345
BstV1I	GCAGC	1 cut(s)	87
BstV2I	GAAGAC	1 cut(s)	125
BtgI	CCRYGG	1 cut(s)	99
BtgZI	GCGATG	1 cut(s)	219
BtsCI	GGATG	1 cut(s)	184
Cac8I	GCNNGC	1 cut(s)	373
CaiI	CAGNNNCTG	1 cut(s)	115
CviAII	CATG	2 cut(s)	100, 412
CviJI	RGCY	5 cut(s)	19, 115, 365, 460, 493
CviKI_1	RGCY	5 cut(s)	19, 115, 365, 460, 493
DdeI	CTNAG	4 cut(s)	23, 57, 71, 150
DpnI	GATC	3 cut(s)	47, 106, 329
DpnII	GATC	3 cut(s)	45, 104, 327
Eam1104I	CTCTTC	1 cut(s)	32
EarI	CTCTTC	1 cut(s)	32
Eco130I	CCWWGG	1 cut(s)	99
Eco57I	CTGAAG	2 cut(s)	137, 387
EcoRII	CCWGG	1 cut(s)	478
EcoT14I	CCWWGG	1 cut(s)	99
ErhI	CCWWGG	1 cut(s)	99
Esp3I	CGTCTC	1 cut(s)	388
FaeI	CATG	2 cut(s)	103, 415
FaiI	YATR	4 cut(s)	95, 101, 216, 413
FatI	CATG	2 cut(s)	99, 411
Fnu4HI	GCNGC	1 cut(s)	76
FokI	GGATG	1 cut(s)	171
Fsp4HI	GCNGC	1 cut(s)	76
FspBI	CTAG	1 cut(s)	486
GluI	GCNGC	1 cut(s)	76
GsuI	CTGGAG	1 cut(s)	302
Hin1II	CATG	2 cut(s)	103, 415
HinfI	GANTC	5 cut(s)	27, 121, 202, 415, 454
HphI	GGTGA	1 cut(s)	455
Hpy166II	GTNNAC	1 cut(s)	289
Hpy188I	TCNGA	4 cut(s)	24, 32, 207, 408
Hpy188III	TCNNGA	6 cut(s)	188, 281, 314, 331, 451, 486
Hpy8I	GTNNAC	1 cut(s)	289
HpyCH4III	ACNGT	1 cut(s)	359
HpyCH4V	TGCA	3 cut(s)	144, 257, 304
HpyF3I	CTNAG	4 cut(s)	23, 57, 71, 150
Hsp92II	CATG	2 cut(s)	103, 415
Kzo9I	GATC	3 cut(s)	45, 104, 327
LpnPI	CCDG	6 cut(s)	162, 210, 266, 327, 465, 492
Lsp1109I	GCAGC	1 cut(s)	87
LweI	GCATC	1 cut(s)	244
MaeI	CTAG	1 cut(s)	486
MalI	GATC	3 cut(s)	47, 106, 329
MboI	GATC	3 cut(s)	45, 104, 327
MboII	GAAGA	3 cut(s)	49, 130, 410
MhlI	GDGCHC	1 cut(s)	345
MluCI	AATT	1 cut(s)	164
MlyI	GAGTC	1 cut(s)	115
MnlI	CCTC	6 cut(s)	35, 154, 277, 420, 439, 482
MseI	TTAA	3 cut(s)	167, 179, 270
MslI	CAYNNNNRTG	2 cut(s)	98, 189
MspR9I	CCNGG	1 cut(s)	480
Mva1269I	GAATGC	1 cut(s)	443
MvaI	CCWGG	1 cut(s)	480
NcoI	CCATGG	1 cut(s)	99
NdeII	GATC	3 cut(s)	45, 104, 327
NlaIII	CATG	2 cut(s)	103, 415
PctI	GAATGC	1 cut(s)	443
PfeI	GAWTC	4 cut(s)	27, 202, 415, 454
PkrI	GCNGC	1 cut(s)	77
PleI	GAGTC	1 cut(s)	115
PpsI	GAGTC	1 cut(s)	115
Psp6I	CCWGG	1 cut(s)	478
PspGI	CCWGG	1 cut(s)	478
PstNI	CAGNNNCTG	1 cut(s)	115
RseI	CAYNNNNRTG	2 cut(s)	98, 189
SaqAI	TTAA	3 cut(s)	167, 179, 270
SatI	GCNGC	1 cut(s)	76
Sau3AI	GATC	3 cut(s)	45, 104, 327
SchI	GAGTC	1 cut(s)	115
ScrFI	CCNGG	1 cut(s)	480
SduI	GDGCHC	1 cut(s)	345
SetI	ASST	6 cut(s)	117, 199, 288, 450, 462, 484
SfaNI	GCATC	1 cut(s)	244
SmiMI	CAYNNNNRTG	2 cut(s)	98, 189
Sse9I	AATT	1 cut(s)	164
SsiI	CCGC	1 cut(s)	441
SspMI	CTAG	1 cut(s)	486
StyD4I	CCNGG	1 cut(s)	478
StyI	CCWWGG	1 cut(s)	99
TaaI	ACNGT	1 cut(s)	359
TaqI	TCGA	2 cut(s)	435, 450
TasI	AATT	1 cut(s)	164
TfiI	GAWTC	4 cut(s)	27, 202, 415, 454
Tru1I	TTAA	3 cut(s)	167, 179, 270
Tru9I	TTAA	3 cut(s)	167, 179, 270
TseI	GCWGC	1 cut(s)	75
TspDTI	ATGAA	1 cut(s)	207
XbaI	TCTAGA	1 cut(s)	485
XspI	CTAG	1 cut(s)	486

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.