Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001057

Physical Location & Seq

Genomic Coordinates Forward (+)

24720919 .. 24723479

Gene Structure 2561 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0258400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1113 bp

ATGGCGCCTCTCTCCTTTCTTTGCTTTCTGGCCACTATCGTTCTCTGCACTCCTTATGCTTCTGCAGCTGCTACTCTACACCTTGATGGGGAACTACCAAATGGACACTTCGAAGAATCACCCAGTTCCTCAAACCTAAAGAAAACAGTCATCGTCGGGAAACACTCACTCCCAAAGTGGGAAATCGACGGCCTGGTCGAGTACATCGCAGGTGGGCCTCAGCCAGGTGGCTTCTACTTTCCGGTGGCGCGTGGCGTCCACGCCGTGAGGCTCGGCAACGAGGCCTCCATTTCTCAGAACGTCAATGTCAACCCGGGTTCGGTCTACTCTCTCACTTTTGGCACCACAAGAACTTGTGCTCAAGACGAGGTGCTCAAGGTCTCGGTGCCGGGCCAGTCTGCAGAGCTTTCCATACAGACTCTGTTCAGCAGCGATGGGGGTGACACTTATGCATGGGCCTTTAAGGCAACTTCCAAGGTTGTTAGGGTTACGTTCCACAACCCTGGGATTCAAGAGGACCCCGCTTGCGGTCCTCTCTTGGATGCTATTGCAATCAAGGAGATCGTACTTCCTCAGAAGTATATAAGAGGTAATTTAGTCAAAAATGGTGGCTTTGAAAACGGTCCTCATGTATTCAAGAATTTCTCAACCGGAGTCCTCCTCCCTCCAAAGTTACTGGACCAAATCTCACCGCTGCCTGGATGGATCATCGAATCCCTAAAGCCTGTGAAGTACATTGACAGGAAGCACTTCTCAGTTCCAGTCGGATTCGCAGCAATTGAATTGGTTGCAGGAAGGGAGAGTGCCATTGCTCAAATTATTAGAACAATCCCAAACAAATCCTACAACCTTACCTTCACCATTGGGGATGCAAAGAACGGTTGTCATGGATCAATGATGGTTGAAGCCTTCGCTGGTAATGAAACCCTAAAAGTTCCTTATGTGTCTCAAGGCAAGGGTGGATATAGAACTGCAAGCTTCAAGTTCCAAGCAGTTTCCCCAAGAACTAGAATAACATTTTACAGTGCATACTATCACACAAAGCTTCATGATTTTGGTCATATGTGTGGCCCTGTCCTAGACAATGTCATTGTCTTTCCAACTAGATACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002682 GO:0002684 GO:0002831 GO:0002833 GO:0003674 GO:0005096 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006950 GO:0006970 GO:0008047 GO:0008150 GO:0008289 GO:0009611 GO:0009628 GO:0009651 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0010646 GO:0010647 GO:0016020 GO:0023051 GO:0023056 GO:0030234 GO:0030695 GO:0031347 GO:0031349 GO:0032101 GO:0032103 GO:0043085 GO:0043087 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043547 GO:0043900 GO:0043902 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0045088 GO:0045089 GO:0047484 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051336 GO:0051345 GO:0060589 GO:0065007 GO:0065009 GO:0071944 GO:0080134 GO:0098772 GO:1900424 GO:1900426 GO:1901000 GO:1901002 GO:1901419 GO:1901421 GO:1902477 GO:1902479 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

ko00220 ko00250 ko00260 ko00630 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 ko01210 ko01230 map00220 map00250 map00260 map00630 map00710 map01100 map01110 map01120 map01130 map01200 map01210 map01230

Pfam Domains

Protein Families

Protein Analysis

370

Amino Acids

40.11

Weight (kDa)

8.75

Isoelectric Point (pI)

33.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF642	PF04862	31 - 186	1.9e-63	Protein of unknown function (DUF642)
DUF642	PF04862	199 - 365	4e-15	Protein of unknown function (DUF642)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001057)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70810 AT5G37740 AT5G37740
fragaria_vesca	FvH4_1g27320 FvH4_1g28670 FvH4_1g28680 FvH4_1g28690 FvH4_2g18820
malus_domestica	MD09G1278700.v1.1 MD09G1278800.v1.1 MD09G1278900.v1.1 MD09G1279000.v1.1 MD17G1260900.v1.1
prunus_persica	Prupe.3G162700_v2.0.a1 Prupe.3G162800_v2.0.a1 Prupe.3G162900_v2.0.a1 Prupe.3G162900_v2.0.a1
pyrus_communis	pycom09g17860 pycom09g17870 pycom09g17880 pycom09g17890 pycom17g26160
rosa_chinensis	RchiOBHm_Chr3g0492961 RchiOBHm_Chr3g0492971 RchiOBHm_Chr3g0492991
rosa_laevigata	RLG00000022734 RLG00000022736 RLG00000022737 RLG00000022739 RLG00000022740 RLG00000022741
rosa_multiflora	Rmu_co8406109.1_g000001 Rmu_sc0000395.1_g000015 Rmu_sc0000395.1_g000023 Rmu_sc0000395.1_g000029 Rmu_sc0008956.1_g000004 Rmu_sc0016690.1_g000001
rosa_roxburghii	Rroxscaffold_6G00391990 Rroxscaffold_6G00392000 Rroxscaffold_6G00392010
rosa_rugosa	Rorug03G0256700 Rorug03G0257800 Rorug03G0258000 Rorug03G0258400 Rorug03G0258500 Rorug03G0258500
rosa_samantha	Rh3AG306200 Rh3AG307300 Rh3AG307500 Rh3BG342700 Rh3BG342800 Rh3BG342900 Rh3CG340000 Rh3CG340200 Rh3DG342000 Rh3DG342200 Rh3DG342400
rosa_wichuraiana	Rw3G027020 Rw3G027030 Rw3G027040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	200
AasI	GACNNNNNNGTC	1 cut(s)	194
Acc36I	ACCTGC	1 cut(s)	200
AccB1I	GGYRCC	3 cut(s)	4, 341, 385
AccI	GTMKAC	1 cut(s)	324
AccII	CGCG	1 cut(s)	250
AciI	CCGC	3 cut(s)	522, 528, 692
AclWI	GGATC	2 cut(s)	713, 898
AcoI	YGGCCR	1 cut(s)	30
AcsI	RAATTY	1 cut(s)	640
AcyI	GRCGYC	2 cut(s)	5, 255
AdeI	CACNNNGTG	1 cut(s)	265
AfaI	GTAC	3 cut(s)	203, 567, 734
AfiI	CCNNNNNNNGG	6 cut(s)	88, 178, 224, 319, 527, 698
AgsI	TTSAA	6 cut(s)	512, 617, 637, 782, 905, 982
AjnI	CCWGG	4 cut(s)	192, 223, 502, 697
AluBI	AGCT	4 cut(s)	68, 406, 978, 1045
AluI	AGCT	4 cut(s)	68, 406, 978, 1045
Alw21I	GWGCWC	2 cut(s)	361, 375
Alw26I	GTCTC	2 cut(s)	385, 951
AlwI	GGATC	2 cut(s)	713, 898
AlwNI	CAGNNNCTG	1 cut(s)	421
Ama87I	CYCGRG	1 cut(s)	313
AoxI	GGCC	7 cut(s)	30, 190, 215, 282, 391, 456, 1069
ApeKI	GCWGC	5 cut(s)	65, 68, 429, 694, 773
ApoI	RAATTY	1 cut(s)	640
Asp700I	GAANNNNTTC	1 cut(s)	749
AspLEI	GCGC	2 cut(s)	7, 250
AspS9I	GGNCC	8 cut(s)	215, 391, 456, 517, 530, 623, 679, 1070
AsuC2I	CCSGG	3 cut(s)	314, 315, 390
AsuHPI	GGTGA	4 cut(s)	111, 452, 681, 850
AsuII	TTCGAA	1 cut(s)	111
AvaI	CYCGRG	1 cut(s)	313
AvaII	GGWCC	4 cut(s)	517, 530, 623, 679
BalI	TGGCCA	1 cut(s)	32
BanI	GGYRCC	3 cut(s)	4, 341, 385
Bbv12I	GWGCWC	2 cut(s)	361, 375
BbvCI	CCTCAGC	1 cut(s)	219
BbvI	GCAGC	5 cut(s)	55, 77, 441, 681, 785
BccI	CCATC	4 cut(s)	80, 428, 696, 892
BceAI	ACGGC	2 cut(s)	205, 248
BciT130I	CCWGG	4 cut(s)	194, 225, 504, 699
BcnI	CCSGG	3 cut(s)	314, 315, 390
BcoDI	GTCTC	2 cut(s)	385, 951
BfaI	CTAG	3 cut(s)	1008, 1079, 1104
BfmI	CTRYAG	2 cut(s)	63, 399
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	1 cut(s)	200
BglI	GCCNNNNNGGC	1 cut(s)	464
BisI	GCNGC	5 cut(s)	66, 69, 430, 695, 774
BlsI	GCNGC	5 cut(s)	67, 70, 431, 696, 775
Bme1390I	CCNGG	7 cut(s)	194, 225, 314, 315, 390, 504, 699
Bme18I	GGWCC	4 cut(s)	517, 530, 623, 679
BmeT110I	CYCGRG	1 cut(s)	313
BmgT120I	GGNCC	8 cut(s)	215, 391, 456, 517, 530, 623, 679, 1070
BmiI	GGNNCC	4 cut(s)	6, 343, 387, 519
BmrFI	CCNGG	7 cut(s)	194, 225, 314, 315, 390, 504, 699
BmrI	ACTGGG	1 cut(s)	117
BmsI	GCATC	2 cut(s)	532, 859
BmuI	ACTGGG	1 cut(s)	117
BplI	GAGNNNNNCTC	2 cut(s)	645, 677
Bpu10I	CCTNAGC	1 cut(s)	219
Bpu14I	TTCGAA	1 cut(s)	111
BpuEI	CTTGAG	3 cut(s)	345, 359, 933
BpuMI	CCSGG	3 cut(s)	314, 315, 390
BsaHI	GRCGYC	2 cut(s)	5, 255
BsaI	GGTCTC	1 cut(s)	385
BsaJI	CCNNGG	4 cut(s)	313, 474, 502, 503
BsaWI	WCCGGW	2 cut(s)	241, 650
BsaXI	ACNNNNNCTCC	4 cut(s)	153, 183, 269, 299
Bsc4I	CCNNNNNNNGG	6 cut(s)	88, 178, 224, 319, 527, 698
Bse1I	ACTGG	4 cut(s)	123, 394, 681, 761
Bse3DI	GCAATG	1 cut(s)	807
BseBI	CCWGG	4 cut(s)	194, 225, 504, 699
BseDI	CCNNGG	4 cut(s)	313, 474, 502, 503
BseGI	GGATG	3 cut(s)	547, 707, 874
BseLI	CCNNNNNNNGG	6 cut(s)	88, 178, 224, 319, 527, 698
BseMI	GCAATG	1 cut(s)	807
BseMII	CTCAG	4 cut(s)	233, 308, 587, 768
BseNI	ACTGG	4 cut(s)	123, 394, 681, 761
BseRI	GAGGAG	1 cut(s)	650
BseXI	GCAGC	5 cut(s)	55, 77, 441, 681, 785
BsgI	GTGCAG	1 cut(s)	31
Bsh1236I	CGCG	1 cut(s)	250
BshFI	GGCC	7 cut(s)	32, 192, 217, 284, 393, 458, 1071
BshNI	GGYRCC	3 cut(s)	4, 341, 385
BsiHKAI	GWGCWC	2 cut(s)	361, 375
BsiHKCI	CYCGRG	1 cut(s)	313
BsiSI	CCGG	4 cut(s)	242, 314, 389, 651
BslI	CCNNNNNNNGG	6 cut(s)	88, 178, 224, 319, 527, 698
BsmAI	GTCTC	2 cut(s)	385, 951
BsnI	GGCC	7 cut(s)	32, 192, 217, 284, 393, 458, 1071
Bso31I	GGTCTC	1 cut(s)	385
BsoBI	CYCGRG	1 cut(s)	313
Bsp119I	TTCGAA	1 cut(s)	111
Bsp1286I	GDGCHC	2 cut(s)	361, 375
Bsp143I	GATC	3 cut(s)	561, 705, 890
BspACI	CCGC	3 cut(s)	522, 528, 692
BspANI	GGCC	7 cut(s)	32, 192, 217, 284, 393, 458, 1071
BspCNI	CTCAG	4 cut(s)	232, 307, 586, 767
BspFNI	CGCG	1 cut(s)	250
BspHI	TCATGA	1 cut(s)	1048
BspLI	GGNNCC	4 cut(s)	6, 343, 387, 519
BspMAI	CTGCAG	2 cut(s)	67, 403
BspMI	ACCTGC	1 cut(s)	200
BspPI	GGATC	2 cut(s)	713, 898
BspT104I	TTCGAA	1 cut(s)	111
BspT107I	GGYRCC	3 cut(s)	4, 341, 385
BspTNI	GGTCTC	1 cut(s)	385
BsrDI	GCAATG	1 cut(s)	807
BsrI	ACTGG	4 cut(s)	123, 394, 681, 761
BssECI	CCNNGG	4 cut(s)	313, 474, 502, 503
BssMI	GATC	3 cut(s)	561, 705, 890
BssNI	GRCGYC	2 cut(s)	5, 255
BssT1I	CCWWGG	1 cut(s)	474
Bst2UI	CCWGG	4 cut(s)	194, 225, 504, 699
Bst4CI	ACNGT	4 cut(s)	148, 623, 881, 1025
BstACI	GRCGYC	2 cut(s)	5, 255
BstBI	TTCGAA	1 cut(s)	111
BstC8I	GCNNGC	2 cut(s)	526, 976
BstDEI	CTNAG	4 cut(s)	219, 294, 573, 754
BstENI	CCTNNNNNAGG	1 cut(s)	222
BstF5I	GGATG	3 cut(s)	547, 707, 874
BstFNI	CGCG	1 cut(s)	250
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	2 cut(s)	7, 250
BstKTI	GATC	3 cut(s)	564, 708, 893
BstMAI	GTCTC	2 cut(s)	385, 951
BstMBI	GATC	3 cut(s)	561, 705, 890
BstMWI	GCNNNNNNNGC	2 cut(s)	65, 464
BstNI	CCWGG	4 cut(s)	194, 225, 504, 699
BstSCI	CCNGG	7 cut(s)	192, 223, 312, 313, 388, 502, 697
BstSFI	CTRYAG	2 cut(s)	63, 399
BstUI	CGCG	1 cut(s)	250
BstV1I	GCAGC	5 cut(s)	55, 77, 441, 681, 785
BstXI	CCANNNNNNTGG	1 cut(s)	503
BsuRI	GGCC	7 cut(s)	32, 192, 217, 284, 393, 458, 1071
BtgZI	GCGATG	2 cut(s)	190, 447
BtsCI	GGATG	3 cut(s)	547, 707, 874
BtsIMutI	CAGTG	1 cut(s)	1030
BveI	ACCTGC	1 cut(s)	200
Cac8I	GCNNGC	2 cut(s)	526, 976
CaiI	CAGNNNCTG	1 cut(s)	421
CciI	TCATGA	1 cut(s)	1048
CfoI	GCGC	2 cut(s)	7, 250
Cfr13I	GGNCC	8 cut(s)	215, 391, 456, 517, 530, 623, 679, 1070
Cfr9I	CCCGGG	1 cut(s)	313
CseI	GACGC	1 cut(s)	244
Csp6I	GTAC	3 cut(s)	202, 566, 733
CspCI	CAANNNNNGTGG	2 cut(s)	589, 624
CviAII	CATG	4 cut(s)	453, 629, 887, 1049
CviQI	GTAC	3 cut(s)	202, 566, 733
DdeI	CTNAG	4 cut(s)	219, 294, 573, 754
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	3 cut(s)	563, 707, 892
DpnII	GATC	3 cut(s)	561, 705, 890
DraIII	CACNNNGTG	1 cut(s)	265
DrdI	GACNNNNNNGTC	1 cut(s)	194
DseDI	GACNNNNNNGTC	1 cut(s)	194
EaeI	YGGCCR	1 cut(s)	30
Eco130I	CCWWGG	1 cut(s)	474
Eco147I	AGGCCT	1 cut(s)	284
Eco31I	GGTCTC	1 cut(s)	385
Eco47I	GGWCC	4 cut(s)	517, 530, 623, 679
Eco88I	CYCGRG	1 cut(s)	313
EcoNI	CCTNNNNNAGG	1 cut(s)	222
EcoO109I	RGGNCCY	1 cut(s)	517
EcoRII	CCWGG	4 cut(s)	192, 223, 502, 697
EcoT14I	CCWWGG	1 cut(s)	474
EcoT22I	ATGCAT	1 cut(s)	454
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	1 cut(s)	474
FaeI	CATG	4 cut(s)	456, 632, 890, 1052
FatI	CATG	4 cut(s)	452, 628, 886, 1048
FauI	CCCGC	1 cut(s)	529
FauNDI	CATATG	1 cut(s)	1062
FblI	GTMKAC	1 cut(s)	324
Fnu4HI	GCNGC	5 cut(s)	66, 69, 430, 695, 774
FokI	GGATG	3 cut(s)	554, 714, 881
Fsp4HI	GCNGC	5 cut(s)	66, 69, 430, 695, 774
FspBI	CTAG	3 cut(s)	1008, 1079, 1104
GlaI	GCGC	2 cut(s)	6, 249
GluI	GCNGC	5 cut(s)	66, 69, 430, 695, 774
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	7 cut(s)	32, 192, 217, 284, 393, 458, 1071
HapII	CCGG	4 cut(s)	242, 314, 389, 651
HgaI	GACGC	1 cut(s)	244
HhaI	GCGC	2 cut(s)	7, 250
Hin1I	GRCGYC	2 cut(s)	5, 255
Hin1II	CATG	4 cut(s)	456, 632, 890, 1052
Hin6I	GCGC	2 cut(s)	5, 248
HinP1I	GCGC	2 cut(s)	5, 248
HincII	GTYRAC	1 cut(s)	310
HindII	GTYRAC	1 cut(s)	310
HindIII	AAGCTT	2 cut(s)	976, 1043
HinfI	GANTC	6 cut(s)	116, 418, 508, 654, 713, 768
HpaII	CCGG	4 cut(s)	242, 314, 389, 651
HphI	GGTGA	4 cut(s)	111, 452, 681, 850
Hpy166II	GTNNAC	3 cut(s)	259, 310, 325
Hpy188I	TCNGA	3 cut(s)	297, 576, 767
Hpy188III	TCNNGA	5 cut(s)	157, 362, 512, 637, 1049
Hpy8I	GTNNAC	3 cut(s)	259, 310, 325
Hpy99I	CGWCG	2 cut(s)	158, 191
HpyAV	CCTTC	3 cut(s)	789, 865, 919
HpyCH4III	ACNGT	4 cut(s)	148, 623, 881, 1025
HpyCH4IV	ACGT	2 cut(s)	300, 491
HpyCH4V	TGCA	9 cut(s)	48, 65, 401, 452, 551, 791, 872, 974, 1028
HpyF10VI	GCNNNNNNNGC	2 cut(s)	65, 464
HpyF3I	CTNAG	4 cut(s)	219, 294, 573, 754
HpySE526I	ACGT	2 cut(s)	300, 491
Hsp92I	GRCGYC	2 cut(s)	5, 255
Hsp92II	CATG	4 cut(s)	456, 632, 890, 1052
HspAI	GCGC	2 cut(s)	5, 248
KasI	GGCGCC	1 cut(s)	4
Kzo9I	GATC	3 cut(s)	561, 705, 890
Lsp1109I	GCAGC	5 cut(s)	55, 77, 441, 681, 785
LweI	GCATC	2 cut(s)	532, 859
MaeI	CTAG	3 cut(s)	1008, 1079, 1104
MaeII	ACGT	2 cut(s)	300, 491
MaeIII	GTNAC	3 cut(s)	440, 487, 672
MalI	GATC	3 cut(s)	563, 707, 892
MboI	GATC	3 cut(s)	561, 705, 890
MboII	GAAGA	1 cut(s)	125
MfeI	CAATTG	1 cut(s)	777
MhlI	GDGCHC	2 cut(s)	361, 375
MlsI	TGGCCA	1 cut(s)	32
MluCI	AATT	5 cut(s)	592, 640, 777, 782, 816
MluNI	TGGCCA	1 cut(s)	32
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	412, 663
MmeI	TCCRAC	1 cut(s)	745
Mox20I	TGGCCA	1 cut(s)	32
Mph1103I	ATGCAT	1 cut(s)	454
MroXI	GAANNNNTTC	1 cut(s)	749
MscI	TGGCCA	1 cut(s)	32
MseI	TTAA	1 cut(s)	462
MslI	CAYNNNNRTG	2 cut(s)	84, 1065
Msp20I	TGGCCA	1 cut(s)	32
MspA1I	CMGCKG	2 cut(s)	68, 694
MspI	CCGG	4 cut(s)	242, 314, 389, 651
MspR9I	CCNGG	7 cut(s)	194, 225, 314, 315, 390, 504, 699
MunI	CAATTG	1 cut(s)	777
MvaI	CCWGG	4 cut(s)	194, 225, 504, 699
MvnI	CGCG	1 cut(s)	250
MwoI	GCNNNNNNNGC	2 cut(s)	65, 464
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	3 cut(s)	314, 315, 390
NdeI	CATATG	1 cut(s)	1062
NdeII	GATC	3 cut(s)	561, 705, 890
NlaIII	CATG	4 cut(s)	456, 632, 890, 1052
NlaIV	GGNNCC	4 cut(s)	6, 343, 387, 519
NmeAIII	GCCGAG	1 cut(s)	252
NmuCI	GTSAC	1 cut(s)	440
NsiI	ATGCAT	1 cut(s)	454
NspV	TTCGAA	1 cut(s)	111
PagI	TCATGA	1 cut(s)	1048
PaqCI	CACCTGC	1 cut(s)	200
PasI	CCCWGGG	1 cut(s)	503
PceI	AGGCCT	1 cut(s)	284
PcsI	WCGNNNNNNNCGW	1 cut(s)	195
PdmI	GAANNNNTTC	1 cut(s)	749
PfeI	GAWTC	4 cut(s)	116, 508, 713, 768
PflFI	GACNNNGTC	1 cut(s)	1085
PkrI	GCNGC	5 cut(s)	67, 70, 431, 696, 775
PleI	GAGTC	2 cut(s)	412, 662
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	2 cut(s)	412, 662
PpuMI	RGGWCCY	1 cut(s)	517
Psp5II	RGGWCCY	1 cut(s)	517
Psp6I	CCWGG	4 cut(s)	192, 223, 502, 697
PspGI	CCWGG	4 cut(s)	192, 223, 502, 697
PspN4I	GGNNCC	4 cut(s)	6, 343, 387, 519
PspPI	GGNCC	8 cut(s)	215, 391, 456, 517, 530, 623, 679, 1070
PspPPI	RGGWCCY	1 cut(s)	517
PstI	CTGCAG	2 cut(s)	67, 403
PstNI	CAGNNNCTG	1 cut(s)	421
PsyI	GACNNNGTC	1 cut(s)	1085
PvuII	CAGCTG	1 cut(s)	68
RsaI	GTAC	3 cut(s)	203, 567, 734
RsaNI	GTAC	3 cut(s)	202, 566, 733
RseI	CAYNNNNRTG	2 cut(s)	84, 1065
SaqAI	TTAA	1 cut(s)	462
SatI	GCNGC	5 cut(s)	66, 69, 430, 695, 774
Sau3AI	GATC	3 cut(s)	561, 705, 890
Sau96I	GGNCC	8 cut(s)	215, 391, 456, 517, 530, 623, 679, 1070
SchI	GAGTC	2 cut(s)	412, 663
ScrFI	CCNGG	7 cut(s)	194, 225, 314, 315, 390, 504, 699
SduI	GDGCHC	2 cut(s)	361, 375
SfaNI	GCATC	2 cut(s)	532, 859
SfcI	CTRYAG	2 cut(s)	63, 399
SfoI	GGCGCC	1 cut(s)	6
SfuI	TTCGAA	1 cut(s)	111
SinI	GGWCC	4 cut(s)	517, 530, 623, 679
SmaI	CCCGGG	1 cut(s)	315
SmiMI	CAYNNNNRTG	2 cut(s)	84, 1065
SmlI	CTYRAG	3 cut(s)	360, 374, 948
SmoI	CTYRAG	3 cut(s)	360, 374, 948
Sse9I	AATT	5 cut(s)	592, 640, 777, 782, 816
SseBI	AGGCCT	1 cut(s)	284
SsiI	CCGC	3 cut(s)	522, 528, 692
SspDI	GGCGCC	1 cut(s)	4
SspMI	CTAG	3 cut(s)	1008, 1079, 1104
StuI	AGGCCT	1 cut(s)	284
StyD4I	CCNGG	7 cut(s)	192, 223, 312, 313, 388, 502, 697
StyI	CCWWGG	1 cut(s)	474
TaaI	ACNGT	4 cut(s)	148, 623, 881, 1025
TaiI	ACGT	2 cut(s)	303, 494
TaqI	TCGA	4 cut(s)	111, 186, 198, 711
TaqII	GACCGA	1 cut(s)	310
TasI	AATT	5 cut(s)	592, 640, 777, 782, 816
TatI	WGTACW	2 cut(s)	201, 732
TfiI	GAWTC	4 cut(s)	116, 508, 713, 768
Tru1I	TTAA	1 cut(s)	462
Tru9I	TTAA	1 cut(s)	462
TscAI	CASTG	1 cut(s)	1030
TseFI	GTSAC	1 cut(s)	440
TseI	GCWGC	5 cut(s)	65, 68, 429, 694, 773
Tsp45I	GTSAC	1 cut(s)	440
TspDTI	ATGAA	2 cut(s)	936, 1037
TspMI	CCCGGG	1 cut(s)	313
TspRI	CASTG	1 cut(s)	1030
Tth111I	GACNNNGTC	1 cut(s)	1085
VpaK11BI	GGWCC	4 cut(s)	517, 530, 623, 679
XagI	CCTNNNNNAGG	1 cut(s)	222
XapI	RAATTY	1 cut(s)	640
XmaI	CCCGGG	1 cut(s)	313
XmiI	GTMKAC	1 cut(s)	324
XmnI	GAANNNNTTC	1 cut(s)	749
XspI	CTAG	3 cut(s)	1008, 1079, 1104
Zsp2I	ATGCAT	1 cut(s)	454

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.