Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003081

Physical Location & Seq

Genomic Coordinates Forward (+)

27372197 .. 27376730

Gene Structure 4534 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G72710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGGAGCCGCGAGTCGGAAACAAGTTTCGGCTCGGAAGGAAGATCGGCGGTGGATCATTCGGAGAGATCTATCTTGGTACCAATATCCAGACGAATGAAGAAGTGGCTATTAAACTTGAAAATGTGAAAACTAAGCATCCTCAGTTGCTGTATGAATCAAAGTTGTACAAAGTATTACAAGGAGGAACTGGCGTTCCAAACGTTAAATGGTATGGTGTTGAAGGGGACTATAATGTCCTCGTGATAGACTTGTTGGGGCCTAGCCTTGAAGATCTATTCAATTTCTGTAGTAGGAAACTCTCACTAAAGACTGTACTAATGCTTGCAGATCAAATGATCAATCGCATTGAGTTTGTACATCAGAAGTCATTTCTACATCGGGACATCAAGCCTGACAACTTTCTGATGGGTCTTGGAAGGCGTGCAAATCAGGTATACGTCATCGACTTTGGTCTGGCAAAGAAGTACAGAGACTCAAATCATCAGCATATTCCATATAGGGAAAACAAAAACTTGACTGGAACTGCTAGATACGCTAGCATGAACACTCACCTTGGCATTGAACAAAGTCGTAGAGATGATTTGGAGTCACTTGGATTCGTTCTCATGTACTTCTTAAAAGGAAGTCTTCCTTGGCAAGGACTGAAAGCTGGCAATAAGAAGCAAAAGTATGAGAAAATCAGTGAAAAGAAAGTATCGACATCTATTGAGGCTTTATGCCGAGGTTATCCATCTGAATTTGCATCTTATTTCCATTATTGCCGTTCTCTGAGATTTGACGACAAGCCAGACTATGCCTACCTGAAACGGCTTTTCCGCGACCTGTTTATTCGTGAAGGCTTCCAGTTTGATTATGTATTTGATTGGACGATCTTGAAGTATCAGCAATCACAGATTTCTACTCCTCCTCCTCGTCATCATGGTCCTGTAGTTGGGCCAAGCTCTGCCCTCCCCCCTGCCATTACCAGTGCTGAGAGGCCATCAGGTGGCGACGAAGCTAGACCTTCTGGCTGGTCATCAGGAATCCCTAGACGAAATTCTGGACAAATTTTTAACTCAGGAAGCTTAGCTAAACAAAAAGCACCAGTTTCAAGTGATCCTGCAATATCTAAAGATGTAGTGTTATCAAGCTCTAGCTTTCTCCGCGCAACTGGGTCATCAAGACGTGCTGCTGTATCCAGTAGTCGCGAAGCTGCAGTTCTGGGAACTGATTCTGAGCCATCAAACCCTCAAATCGTTGAAGCTGGATCAGGCTCCAATTCAAAGATCCCTGTTAGTCGAAACTCACCTATCGTCTCATCTGAGATCAACAAGCTATCATCACCTTCAAGGGCGACTACTTCAGTCATGAAGAACTATGAGGCTAATCTTAAAGGGATCGAGAGTCTGCATTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008360 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022603 GO:0022604 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04011 ko04392 map04011 map04392

Pfam Domains

Protein Families

Pkinase

Protein Analysis

465

Amino Acids

51.88

Weight (kDa)

9.59

Isoelectric Point (pI)

47.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	10 - 225	1.5e-25	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	10 - 232	8.4e-16	Protein tyrosine and serine/threonine kinase
Pkinase_fungal	PF17667	110 - 205	2.6e-08	Fungal protein kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003081)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72710
fragaria_vesca	FvH4_6g34010 FvH4_6g34010 FvH4_6g34010
malus_domestica	MD09G1190100.v1.1 MD17G1173000.v1.1
prunus_persica	Prupe.3G046000_v2.0.a1 Prupe.3G046000_v2.0.a1
pyrus_communis	pycom09g10660 pycom17g17150
rosa_chinensis	RchiOBHm_Chr2g0143801 RchiOBHm_Chr2g0143831 RchiOBHm_Chr2g0143921 RchiOBHm_Chr2g0143961 RchiOBHm_Chr2g0144121 RchiOBHm_Chr2g0144141 RchiOBHm_Chr2g0144191 RchiOBHm_Chr2g0144221 RchiOBHm_Chr2g0144271
rosa_laevigata	RLG00000020070
rosa_multiflora	Rmu_sc0002354.1_g000001 Rmu_sc0012360.1_g000001
rosa_roxburghii	Rroxscaffold_2G00101420
rosa_rugosa	Rorug02G0385600 Rorug02G0385700
rosa_samantha	Rh2AG438100 Rh2BG446500 Rh2BG448300 Rh2CG424700 Rh2DG455900 Rh2DG456800 Rh2DG457800
rosa_wichuraiana	Rw2G033290 Rw2G033320 Rw2G035780 Rw2G035830 Rw2G036150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	233
Acc65I	GGTACC	1 cut(s)	77
AccB1I	GGYRCC	1 cut(s)	77
AccB7I	CCANNNNNTGG	1 cut(s)	986
AccI	GTMKAC	1 cut(s)	435
AccII	CGCG	4 cut(s)	10, 819, 1146, 1188
AciI	CCGC	4 cut(s)	8, 48, 817, 1144
AclI	AACGTT	1 cut(s)	201
AclWI	GGATC	5 cut(s)	61, 1091, 1255, 1261, 1385
AcsI	RAATTY	3 cut(s)	737, 1036, 1047
AcuI	CTGAAG	1 cut(s)	1326
AfaI	GTAC	6 cut(s)	79, 167, 315, 357, 467, 611
AfiI	CCNNNNNNNGG	4 cut(s)	14, 638, 932, 986
AjiI	CACGTC	1 cut(s)	1166
AjuI	GAANNNNNNNTTGG	2 cut(s)	616, 648
AloI	GAACNNNNNNTCC	4 cut(s)	177, 178, 209, 210
Alw26I	GTCTC	2 cut(s)	465, 1300
AlwI	GGATC	5 cut(s)	61, 1091, 1255, 1261, 1385
AlwNI	CAGNNNCTG	1 cut(s)	148
AoxI	GGCC	3 cut(s)	257, 935, 977
ApeKI	GCWGC	2 cut(s)	1169, 1193
ApoI	RAATTY	3 cut(s)	737, 1036, 1047
Asp700I	GAANNNNTTC	1 cut(s)	1210
Asp718I	GGTACC	1 cut(s)	77
AspLEI	GCGC	1 cut(s)	1148
AspS9I	GGNCC	3 cut(s)	257, 923, 935
AsuHPI	GGTGA	3 cut(s)	542, 1278, 1314
AsuNHI	GCTAGC	1 cut(s)	536
AvaII	GGWCC	1 cut(s)	923
BanI	GGYRCC	1 cut(s)	77
BauI	CACGAG	1 cut(s)	239
BbsI	GAAGAC	1 cut(s)	620
BbvI	GCAGC	2 cut(s)	1156, 1180
BccI	CCATC	4 cut(s)	400, 739, 988, 1228
BceAI	ACGGC	2 cut(s)	747, 824
BciVI	GTATCC	1 cut(s)	1186
BclI	TGATCA	1 cut(s)	336
BcoDI	GTCTC	2 cut(s)	465, 1300
BfaI	CTAG	6 cut(s)	261, 528, 537, 999, 1029, 1134
BfmI	CTRYAG	3 cut(s)	286, 927, 1194
BfuI	GTATCC	1 cut(s)	1186
BglII	AGATCT	2 cut(s)	66, 271
BisI	GCNGC	3 cut(s)	8, 1170, 1194
BlpI	GCTNAGC	1 cut(s)	1066
BlsI	GCNGC	3 cut(s)	9, 1171, 1195
Bme18I	GGWCC	1 cut(s)	923
BmgBI	CACGTC	1 cut(s)	1166
BmgT120I	GGNCC	3 cut(s)	257, 923, 935
BmiI	GGNNCC	4 cut(s)	6, 79, 258, 1255
BmrI	ACTGGG	1 cut(s)	1161
BmsI	GCATC	2 cut(s)	145, 752
BmtI	GCTAGC	1 cut(s)	540
BmuI	ACTGGG	1 cut(s)	1161
BoxI	GACNNNNGTC	1 cut(s)	450
BpiI	GAAGAC	1 cut(s)	620
Bpu1102I	GCTNAGC	1 cut(s)	1066
BsaJI	CCNNGG	3 cut(s)	553, 632, 721
BsaXI	ACNNNNNCTCC	2 cut(s)	892, 922
Bsc4I	CCNNNNNNNGG	4 cut(s)	14, 638, 932, 986
Bse1I	ACTGG	7 cut(s)	193, 523, 844, 966, 1085, 1156, 1179
BseDI	CCNNGG	3 cut(s)	553, 632, 721
BseGI	GGATG	1 cut(s)	136
BseLI	CCNNNNNNNGG	4 cut(s)	14, 638, 932, 986
BseMII	CTCAG	6 cut(s)	155, 761, 963, 1071, 1206, 1293
BseNI	ACTGG	7 cut(s)	193, 523, 844, 966, 1085, 1156, 1179
BseRI	GAGGAG	3 cut(s)	894, 897, 900
BseXI	GCAGC	2 cut(s)	1156, 1180
Bsh1236I	CGCG	4 cut(s)	10, 819, 1146, 1188
BshFI	GGCC	3 cut(s)	259, 937, 979
BshNI	GGYRCC	1 cut(s)	77
BslFI	GGGAC	2 cut(s)	239, 395
BslI	CCNNNNNNNGG	4 cut(s)	14, 638, 932, 986
BsmAI	GTCTC	2 cut(s)	465, 1300
BsmBI	CGTCTC	1 cut(s)	1300
BsmFI	GGGAC	2 cut(s)	239, 395
BsnI	GGCC	3 cut(s)	259, 937, 979
Bsp1407I	TGTACA	2 cut(s)	165, 355
Bsp1720I	GCTNAGC	1 cut(s)	1066
Bsp68I	TCGCGA	1 cut(s)	1188
BspACI	CCGC	4 cut(s)	8, 48, 817, 1144
BspANI	GGCC	3 cut(s)	259, 937, 979
BspCNI	CTCAG	6 cut(s)	154, 762, 964, 1070, 1207, 1294
BspFNI	CGCG	4 cut(s)	10, 819, 1146, 1188
BspHI	TCATGA	1 cut(s)	1347
BspLI	GGNNCC	4 cut(s)	6, 79, 258, 1255
BspMAI	CTGCAG	1 cut(s)	1198
BspOI	GCTAGC	1 cut(s)	540
BspPI	GGATC	5 cut(s)	61, 1091, 1255, 1261, 1385
BspT107I	GGYRCC	1 cut(s)	77
BsrGI	TGTACA	2 cut(s)	165, 355
BsrI	ACTGG	7 cut(s)	193, 523, 844, 966, 1085, 1156, 1179
BssECI	CCNNGG	3 cut(s)	553, 632, 721
BssNAI	GTATAC	1 cut(s)	436
BssSI	CACGAG	1 cut(s)	239
BssT1I	CCWWGG	2 cut(s)	553, 632
Bst1107I	GTATAC	1 cut(s)	436
Bst2BI	CACGAG	1 cut(s)	239
Bst4CI	ACNGT	1 cut(s)	313
BstAUI	TGTACA	2 cut(s)	165, 355
BstC8I	GCNNGC	4 cut(s)	324, 423, 538, 652
BstDEI	CTNAG	8 cut(s)	132, 141, 770, 972, 1057, 1066, 1215, 1302
BstENI	CCTNNNNNAGG	1 cut(s)	636
BstF5I	GGATG	1 cut(s)	136
BstFNI	CGCG	4 cut(s)	10, 819, 1146, 1188
BstHHI	GCGC	1 cut(s)	1148
BstMAI	GTCTC	2 cut(s)	465, 1300
BstMWI	GCNNNNNNNGC	2 cut(s)	533, 1143
BstPAI	GACNNNNGTC	1 cut(s)	450
BstSFI	CTRYAG	3 cut(s)	286, 927, 1194
BstUI	CGCG	4 cut(s)	10, 819, 1146, 1188
BstV1I	GCAGC	2 cut(s)	1156, 1180
BstV2I	GAAGAC	1 cut(s)	620
BstX2I	RGATCY	3 cut(s)	66, 271, 1266
BstYI	RGATCY	3 cut(s)	66, 271, 1266
BstZ17I	GTATAC	1 cut(s)	436
BsuI	GTATCC	1 cut(s)	1186
BsuRI	GGCC	3 cut(s)	259, 937, 979
BtrI	CACGTC	1 cut(s)	1166
BtsCI	GGATG	1 cut(s)	136
BtsIMutI	CAGTG	2 cut(s)	688, 973
BtuMI	TCGCGA	1 cut(s)	1188
Cac8I	GCNNGC	4 cut(s)	324, 423, 538, 652
CaiI	CAGNNNCTG	1 cut(s)	148
CciI	TCATGA	1 cut(s)	1347
CfoI	GCGC	1 cut(s)	1148
Cfr13I	GGNCC	3 cut(s)	257, 923, 935
Csp6I	GTAC	6 cut(s)	78, 166, 314, 356, 466, 610
CviAII	CATG	4 cut(s)	541, 607, 920, 1348
CviQI	GTAC	6 cut(s)	78, 166, 314, 356, 466, 610
DdeI	CTNAG	8 cut(s)	132, 141, 770, 972, 1057, 1066, 1215, 1302
DrdI	GACNNNNNNGTC	1 cut(s)	233
DseDI	GACNNNNNNGTC	1 cut(s)	233
Eco130I	CCWWGG	2 cut(s)	553, 632
Eco47I	GGWCC	1 cut(s)	923
Eco57I	CTGAAG	1 cut(s)	1326
EcoNI	CCTNNNNNAGG	1 cut(s)	636
EcoO109I	RGGNCCY	1 cut(s)	257
EcoT14I	CCWWGG	2 cut(s)	553, 632
ErhI	CCWWGG	2 cut(s)	553, 632
Esp3I	CGTCTC	1 cut(s)	1300
FaeI	CATG	4 cut(s)	544, 610, 923, 1351
FalI	AAGNNNNNCTT	4 cut(s)	612, 644, 616, 648
FaqI	GGGAC	2 cut(s)	239, 395
FatI	CATG	4 cut(s)	540, 606, 919, 1347
FbaI	TGATCA	1 cut(s)	336
FblI	GTMKAC	1 cut(s)	435
Fnu4HI	GCNGC	3 cut(s)	8, 1170, 1194
FokI	GGATG	1 cut(s)	123
Fsp4HI	GCNGC	3 cut(s)	8, 1170, 1194
FspBI	CTAG	6 cut(s)	261, 528, 537, 999, 1029, 1134
GlaI	GCGC	1 cut(s)	1147
GluI	GCNGC	3 cut(s)	8, 1170, 1194
HaeIII	GGCC	3 cut(s)	259, 937, 979
HhaI	GCGC	1 cut(s)	1148
Hin1II	CATG	4 cut(s)	544, 610, 923, 1351
Hin6I	GCGC	1 cut(s)	1146
HinP1I	GCGC	1 cut(s)	1146
HindIII	AAGCTT	1 cut(s)	1063
HinfI	GANTC	8 cut(s)	12, 155, 473, 587, 597, 1023, 1211, 1384
HphI	GGTGA	3 cut(s)	542, 1278, 1314
Hpy166II	GTNNAC	1 cut(s)	436
Hpy188I	TCNGA	9 cut(s)	17, 35, 62, 363, 405, 736, 771, 1216, 1303
Hpy8I	GTNNAC	1 cut(s)	436
Hpy99I	CGWCG	1 cut(s)	995
HpyAV	CCTTC	6 cut(s)	30, 215, 411, 830, 1014, 1335
HpyCH4III	ACNGT	1 cut(s)	313
HpyCH4IV	ACGT	3 cut(s)	201, 438, 1165
HpyCH4V	TGCA	6 cut(s)	326, 425, 743, 1103, 1196, 1390
HpyF10VI	GCNNNNNNNGC	2 cut(s)	533, 1143
HpyF3I	CTNAG	8 cut(s)	132, 141, 770, 972, 1057, 1066, 1215, 1302
HpySE526I	ACGT	3 cut(s)	201, 438, 1165
Hsp92II	CATG	4 cut(s)	544, 610, 923, 1351
HspAI	GCGC	1 cut(s)	1146
KpnI	GGTACC	1 cut(s)	81
Ksp22I	TGATCA	1 cut(s)	336
LmnI	GCTCC	2 cut(s)	4, 1259
Lsp1109I	GCAGC	2 cut(s)	1156, 1180
LweI	GCATC	2 cut(s)	145, 752
MaeI	CTAG	6 cut(s)	261, 528, 537, 999, 1029, 1134
MaeII	ACGT	3 cut(s)	201, 438, 1165
MaeIII	GTNAC	1 cut(s)	588
MboII	GAAGA	5 cut(s)	52, 110, 281, 620, 1363
MflI	RGATCY	3 cut(s)	66, 271, 1266
MluCI	AATT	5 cut(s)	280, 737, 1036, 1047, 1258
MlyI	GAGTC	4 cut(s)	21, 467, 596, 1393
MroXI	GAANNNNTTC	1 cut(s)	1210
MseI	TTAA	5 cut(s)	111, 204, 617, 1053, 1371
MvnI	CGCG	4 cut(s)	10, 819, 1146, 1188
MwoI	GCNNNNNNNGC	2 cut(s)	533, 1143
NheI	GCTAGC	1 cut(s)	536
NlaIII	CATG	4 cut(s)	544, 610, 923, 1351
NlaIV	GGNNCC	4 cut(s)	6, 79, 258, 1255
NmeAIII	GCCGAG	1 cut(s)	746
NmuCI	GTSAC	1 cut(s)	588
NruI	TCGCGA	1 cut(s)	1188
PagI	TCATGA	1 cut(s)	1347
PdmI	GAANNNNTTC	1 cut(s)	1210
PfeI	GAWTC	4 cut(s)	155, 597, 1023, 1211
PflMI	CCANNNNNTGG	1 cut(s)	986
PkrI	GCNGC	3 cut(s)	9, 1171, 1195
PleI	GAGTC	4 cut(s)	20, 467, 595, 1392
PpsI	GAGTC	4 cut(s)	20, 467, 595, 1392
PshAI	GACNNNNGTC	1 cut(s)	450
Psp1406I	AACGTT	1 cut(s)	201
PspN4I	GGNNCC	4 cut(s)	6, 79, 258, 1255
PspPI	GGNCC	3 cut(s)	257, 923, 935
PstI	CTGCAG	1 cut(s)	1198
PstNI	CAGNNNCTG	1 cut(s)	148
PsuI	RGATCY	3 cut(s)	66, 271, 1266
RruI	TCGCGA	1 cut(s)	1188
RsaI	GTAC	6 cut(s)	79, 167, 315, 357, 467, 611
RsaNI	GTAC	6 cut(s)	78, 166, 314, 356, 466, 610
SaqAI	TTAA	5 cut(s)	111, 204, 617, 1053, 1371
SatI	GCNGC	3 cut(s)	8, 1170, 1194
Sau96I	GGNCC	3 cut(s)	257, 923, 935
SchI	GAGTC	4 cut(s)	21, 467, 596, 1393
SfaNI	GCATC	2 cut(s)	145, 752
SfcI	CTRYAG	3 cut(s)	286, 927, 1194
SinI	GGWCC	1 cut(s)	923
Sse9I	AATT	5 cut(s)	280, 737, 1036, 1047, 1258
SsiI	CCGC	4 cut(s)	8, 48, 817, 1144
SspMI	CTAG	6 cut(s)	261, 528, 537, 999, 1029, 1134
StyI	CCWWGG	2 cut(s)	553, 632
TaaI	ACNGT	1 cut(s)	313
TaiI	ACGT	3 cut(s)	204, 441, 1168
TaqI	TCGA	4 cut(s)	444, 698, 1279, 1380
TasI	AATT	5 cut(s)	280, 737, 1036, 1047, 1258
TatI	WGTACW	5 cut(s)	165, 313, 355, 465, 609
TauI	GCSGC	1 cut(s)	10
TfiI	GAWTC	4 cut(s)	155, 597, 1023, 1211
Tru1I	TTAA	5 cut(s)	111, 204, 617, 1053, 1371
Tru9I	TTAA	5 cut(s)	111, 204, 617, 1053, 1371
TscAI	CASTG	2 cut(s)	688, 973
TseFI	GTSAC	1 cut(s)	588
TseI	GCWGC	2 cut(s)	1169, 1193
Tsp45I	GTSAC	1 cut(s)	588
TspDTI	ATGAA	4 cut(s)	111, 168, 557, 1364
TspRI	CASTG	2 cut(s)	688, 973
Van91I	CCANNNNNTGG	1 cut(s)	986
VpaK11BI	GGWCC	1 cut(s)	923
XagI	CCTNNNNNAGG	1 cut(s)	636
XapI	RAATTY	3 cut(s)	737, 1036, 1047
XcmI	CCANNNNNNNNNTGG	1 cut(s)	204
XmiI	GTMKAC	1 cut(s)	435
XmnI	GAANNNNTTC	1 cut(s)	1210
XspI	CTAG	6 cut(s)	261, 528, 537, 999, 1029, 1134

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.