MD17G1173000.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
17856043 .. 17867149
11107 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1173000.v1.1.491

Sequence Viewer

Length: 1434 bp
ATGGCGATGGAGCCGCGGGTCGGCGGCAGGTTTCGACTTGGCCGGAAGATCGGTAGCGGATCTTTCGGAGAGATCTACCTAGGTACTAATATTCAGACAAATGAGGAGGTTGCGATTAAGCTTGAAAATGTCAAAACGAAGCATCCACAATTGTTGTATGAATCAAAGCTGTATAAAATACTACAGGGAGGAACTGGAGTTCCAAACGTGAGATGGTATGGCACTGAAGGAGACTATAATGTTCTTGTGATGGATTTACTGGGACCTAGTCTTGAAGATTTGTTCAACTTTTGCAGTAGGAAATTATCTCTTAAGACTGTTCTCATGCTTGCAGATCAAATGATCAATCGAGTGGAGTTTGTTCATTCCAAGTCCTTTCTACACCGTGATATTAAACCAGACAATTTCCTAATGGGTTTGGGTCGACGAGCAAATCAGATTTACATCATTGACTTCGGTCTCGCTAAGAAGTATAGAGACACTTCGACTCATCAGCACATTCCTTATAGAGAAAATAAGAATTTGACTGGTACTGCAAGATATGCAAGCATGAATACTCACCTTGGCATTGAACAAAGCCGCAGGGATGATTTAGAATCACTTGGATATGTGCTCATGTACTTTCTAAGAGGAAGTCTTCCTTGGCAGGGATTGAAAGCAGGAACAAAAAAGCAAAAGTATGAGAAGATCAGTGAAAAGAAAGTGTCAACTTCGATTGAGGCATTATGCCGTGGGTATCCCACAGAGTTTGCGTCGTACTTCCATTACTGTAGGTCTCTGCGATTTGATGATAAACCAGATTATGCTTATCTGAAGAGACTCTTTCGTGATCTTTTTATTCGGGAAGGTTTTCAGTTTGATTATGTATTTGATTGGACTATCTTGAAATATCAGCAGTCACAGATTGCCACACCTCCTACTCGACCTCTTGGTCCTAATGCTGGACCGAGCTCTGGCTTGCCTCCCACTGTTGCAAATGCTGAAAGACAATCTGGTGGTGAGGAAGGTAGACCAACTGGTTGGTCGTCATCAGATCCCTCTCGTAGGAGAAACTCTGGACCACTTGTAAATTCTGGAAACCTGTCCAGACAAAAAAGTCCTGCTGCAAATGATCCATCTCTTTCTAAAGACGCAATGTTATCAAGTTCTAATTTCATGCGGTCAAGTGGATCATCGAGGAGGGCTGCAGTCTCTAGCAGTCGGGATGCTGTGTTTGCTAGCAGTGAAACTGATCCCTCTCGCCTTCAAACCACAGAAATAAGTCCCGGAACACTAGGTAAAATTTCTGGTGGCCAAAGAAGTTCACCGGTTGTGCCTTCAGATAGCAACCGTACATCTTCAGGAAGAAATATTTCAAACACAAAGAACTTAGAGTCCACTCTCAAGGGTATTGAGAGCCTGCATTTTAATAATGATGATAGAGTACAGTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

478

Amino Acids

53.46

Weight (kDa)

9.63

Isoelectric Point (pI)

51.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 12 - 229 4.7e-27 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 12 - 267 3.8e-16 Protein tyrosine and serine/threonine kinase
Pkinase_fungal PF17667 111 - 208 1.5e-08 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 930, 1095
Acc36I ACCTGC 1 cut(s) 18
AccI GTMKAC 2 cut(s) 424, 1009
AccII CGCG 1 cut(s) 16
AciI CCGC 6 cut(s) 14, 16, 24, 57, 580, 1159
AclWI GGATC 5 cut(s) 67, 1028, 1106, 1177, 1226
AcoI YGGCCR 2 cut(s) 40, 1291
AcsI RAATTY 3 cut(s) 520, 1069, 1281
AcuI CTGAAG 4 cut(s) 246, 833, 1302, 1323
AfaI GTAC 6 cut(s) 85, 532, 620, 758, 1333, 1425
AfiI CCNNNNNNNGG 5 cut(s) 20, 647, 941, 953, 1044
AflII CTTAAG 1 cut(s) 311
AgeI ACCGGT 1 cut(s) 1306
AgsI TTSAA 8 cut(s) 125, 275, 286, 572, 655, 886, 1247, 1356
AjuI GAANNNNNNNTTGG 2 cut(s) 625, 657
AloI GAACNNNNNNTCC 6 cut(s) 183, 184, 215, 216, 1358, 1390
AluBI AGCT 3 cut(s) 121, 169, 951
AluI AGCT 3 cut(s) 121, 169, 951
Alw21I GWGCWC 2 cut(s) 615, 953
Alw26I GTCTC 6 cut(s) 225, 464, 471, 780, 811, 1195
AlwI GGATC 5 cut(s) 67, 1028, 1106, 1177, 1226
AoxI GGCC 2 cut(s) 40, 1291
ApeKI GCWGC 2 cut(s) 1103, 1184
ApoI RAATTY 3 cut(s) 520, 1069, 1281
AsiGI ACCGGT 1 cut(s) 1306
Asp700I GAANNNNTTC 2 cut(s) 849, 1351
AspA2I CCTAGG 1 cut(s) 79
AspS9I GGNCC 4 cut(s) 263, 932, 944, 1058
AsuC2I CCSGG 1 cut(s) 1266
AsuHPI GGTGA 3 cut(s) 551, 1010, 1296
AsuNHI GCTAGC 1 cut(s) 1217
AvaII GGWCC 4 cut(s) 263, 932, 944, 1058
AvrII CCTAGG 1 cut(s) 79
BalI TGGCCA 1 cut(s) 1293
BanII GRGCYC 1 cut(s) 953
BbsI GAAGAC 1 cut(s) 629
Bbv12I GWGCWC 2 cut(s) 615, 953
BbvI GCAGC 2 cut(s) 1090, 1171
BccI CCATC 3 cut(s) 207, 244, 1123
BceAI ACGGC 1 cut(s) 714
BciVI GTATCC 1 cut(s) 747
BclI TGATCA 1 cut(s) 342
BcnI CCSGG 1 cut(s) 1266
BcoDI GTCTC 6 cut(s) 225, 464, 471, 780, 811, 1195
BfaI CTAG 5 cut(s) 80, 267, 1194, 1218, 1274
BfmI CTRYAG 3 cut(s) 182, 769, 1185
BfrI CTTAAG 1 cut(s) 311
BfuAI ACCTGC 1 cut(s) 18
BfuI GTATCC 1 cut(s) 747
BglII AGATCT 1 cut(s) 72
BisI GCNGC 5 cut(s) 14, 25, 580, 1104, 1185
BlnI CCTAGG 1 cut(s) 79
BlsI GCNGC 5 cut(s) 15, 26, 581, 1105, 1186
Bme1390I CCNGG 1 cut(s) 1266
Bme18I GGWCC 4 cut(s) 263, 932, 944, 1058
BmgT120I GGNCC 4 cut(s) 263, 932, 944, 1058
BmiI GGNNCC 2 cut(s) 12, 264
BmrFI CCNGG 1 cut(s) 1266
BmrI ACTGGG 1 cut(s) 269
BmsI GCATC 2 cut(s) 151, 1195
BmtI GCTAGC 1 cut(s) 1221
BmuI ACTGGG 1 cut(s) 269
BoxI GACNNNNGTC 1 cut(s) 456
BpiI GAAGAC 1 cut(s) 629
BpmI CTGGAG 1 cut(s) 216
BpuEI CTTGAG 1 cut(s) 1367
BpuMI CCSGG 1 cut(s) 1266
BsaBI GATNNNNATC 1 cut(s) 443
BsaI GGTCTC 2 cut(s) 464, 780
BsaJI CCNNGG 5 cut(s) 14, 79, 562, 641, 730
BsaWI WCCGGW 1 cut(s) 1306
Bsc4I CCNNNNNNNGG 5 cut(s) 20, 647, 941, 953, 1044
Bse118I RCCGGY 1 cut(s) 1306
Bse1I ACTGG 4 cut(s) 199, 264, 532, 1021
Bse3DI GCAATG 1 cut(s) 1140
Bse8I GATNNNNATC 1 cut(s) 443
BseDI CCNNGG 5 cut(s) 14, 79, 562, 641, 730
BseGI GGATG 3 cut(s) 142, 592, 1210
BseJI GATNNNNATC 1 cut(s) 443
BseLI CCNNNNNNNGG 5 cut(s) 20, 647, 941, 953, 1044
BseMI GCAATG 1 cut(s) 1140
BseNI ACTGG 4 cut(s) 199, 264, 532, 1021
BseRI GAGGAG 2 cut(s) 119, 1192
BseXI GCAGC 2 cut(s) 1090, 1171
Bsh1236I CGCG 1 cut(s) 16
BshFI GGCC 2 cut(s) 42, 1293
BshTI ACCGGT 1 cut(s) 1306
BsiHKAI GWGCWC 2 cut(s) 615, 953
BsiSI CCGG 3 cut(s) 43, 1266, 1307
BslFI GGGAC 2 cut(s) 276, 1248
BslI CCNNNNNNNGG 5 cut(s) 20, 647, 941, 953, 1044
BsmAI GTCTC 6 cut(s) 225, 464, 471, 780, 811, 1195
BsmFI GGGAC 2 cut(s) 276, 1248
BsnI GGCC 2 cut(s) 42, 1293
Bso31I GGTCTC 2 cut(s) 464, 780
Bsp1286I GDGCHC 2 cut(s) 615, 953
BspACI CCGC 6 cut(s) 14, 16, 24, 57, 580, 1159
BspANI GGCC 2 cut(s) 42, 1293
BspFNI CGCG 1 cut(s) 16
BspLI GGNNCC 2 cut(s) 12, 264
BspMAI CTGCAG 1 cut(s) 1189
BspMI ACCTGC 1 cut(s) 18
BspOI GCTAGC 1 cut(s) 1221
BspPI GGATC 5 cut(s) 67, 1028, 1106, 1177, 1226
BspTI CTTAAG 1 cut(s) 311
BspTNI GGTCTC 2 cut(s) 464, 780
BsrDI GCAATG 1 cut(s) 1140
BsrFI RCCGGY 1 cut(s) 1306
BsrI ACTGG 4 cut(s) 199, 264, 532, 1021
BssAI RCCGGY 1 cut(s) 1306
BssECI CCNNGG 5 cut(s) 14, 79, 562, 641, 730
BssT1I CCWWGG 3 cut(s) 79, 562, 641
Bst4CI ACNGT 6 cut(s) 319, 386, 770, 970, 1331, 1428
Bst6I CTCTTC 1 cut(s) 809
BstAFI CTTAAG 1 cut(s) 311
BstAPI GCANNNNNTGC 1 cut(s) 542
BstC8I GCNNGC 5 cut(s) 330, 547, 959, 1219, 1400
BstDEI CTNAG 3 cut(s) 465, 626, 1369
BstDSI CCRYGG 2 cut(s) 14, 730
BstENI CCTNNNNNAGG 1 cut(s) 1042
BstF5I GGATG 3 cut(s) 142, 592, 1210
BstFNI CGCG 1 cut(s) 16
BstMAI GTCTC 6 cut(s) 225, 464, 471, 780, 811, 1195
BstMWI GCNNNNNNNGC 2 cut(s) 542, 1214
BstPAI GACNNNNGTC 1 cut(s) 456
BstSCI CCNGG 1 cut(s) 1264
BstSFI CTRYAG 3 cut(s) 182, 769, 1185
BstUI CGCG 1 cut(s) 16
BstV1I GCAGC 2 cut(s) 1090, 1171
BstV2I GAAGAC 1 cut(s) 629
BstX2I RGATCY 3 cut(s) 59, 72, 1033
BstXI CCANNNNNNTGG 1 cut(s) 1020
BstYI RGATCY 3 cut(s) 59, 72, 1033
BsuI GTATCC 1 cut(s) 747
BsuRI GGCC 2 cut(s) 42, 1293
BtgI CCRYGG 2 cut(s) 14, 730
BtgZI GCGATG 1 cut(s) 20
BtsCI GGATG 3 cut(s) 142, 592, 1210
BtsI GCAGTG 1 cut(s) 1228
BtsIMutI CAGTG 4 cut(s) 222, 697, 966, 1228
BveI ACCTGC 1 cut(s) 18
Cac8I GCNNGC 5 cut(s) 330, 547, 959, 1219, 1400
Cfr10I RCCGGY 1 cut(s) 1306
Cfr13I GGNCC 4 cut(s) 263, 932, 944, 1058
Cfr42I CCGCGG 1 cut(s) 17
CseI GACGC 2 cut(s) 741, 1139
Csp6I GTAC 6 cut(s) 84, 531, 619, 757, 1332, 1424
CspAI ACCGGT 1 cut(s) 1306
CspCI CAANNNNNGTGG 4 cut(s) 135, 170, 730, 765
CviAII CATG 4 cut(s) 325, 550, 616, 1156
CviQI GTAC 6 cut(s) 84, 531, 619, 757, 1332, 1424
DdeI CTNAG 3 cut(s) 465, 626, 1369
DrdI GACNNNNNNGTC 2 cut(s) 930, 1095
DseDI GACNNNNNNGTC 2 cut(s) 930, 1095
EaeI YGGCCR 2 cut(s) 40, 1291
Eam1104I CTCTTC 1 cut(s) 809
EarI CTCTTC 1 cut(s) 809
Ecl136II GAGCTC 1 cut(s) 951
Eco130I CCWWGG 3 cut(s) 79, 562, 641
Eco24I GRGCYC 1 cut(s) 953
Eco31I GGTCTC 2 cut(s) 464, 780
Eco47I GGWCC 4 cut(s) 263, 932, 944, 1058
Eco53kI GAGCTC 1 cut(s) 951
Eco57I CTGAAG 4 cut(s) 246, 833, 1302, 1323
EcoICRI GAGCTC 1 cut(s) 951
EcoNI CCTNNNNNAGG 1 cut(s) 1042
EcoO109I RGGNCCY 1 cut(s) 263
EcoT14I CCWWGG 3 cut(s) 79, 562, 641
EcoT38I GRGCYC 1 cut(s) 953
ErhI CCWWGG 3 cut(s) 79, 562, 641
FaeI CATG 4 cut(s) 328, 553, 619, 1159
FalI AAGNNNNNCTT 4 cut(s) 625, 657, 806, 838
FaqI GGGAC 2 cut(s) 276, 1248
FatI CATG 4 cut(s) 324, 549, 615, 1155
FauI CCCGC 1 cut(s) 9
FbaI TGATCA 1 cut(s) 342
FblI GTMKAC 2 cut(s) 424, 1009
Fnu4HI GCNGC 5 cut(s) 14, 25, 580, 1104, 1185
FokI GGATG 3 cut(s) 129, 599, 1217
FriOI GRGCYC 1 cut(s) 953
Fsp4HI GCNGC 5 cut(s) 14, 25, 580, 1104, 1185
FspBI CTAG 5 cut(s) 80, 267, 1194, 1218, 1274
GluI GCNGC 5 cut(s) 14, 25, 580, 1104, 1185
GsuI CTGGAG 1 cut(s) 216
HaeIII GGCC 2 cut(s) 42, 1293
HapII CCGG 3 cut(s) 43, 1266, 1307
HgaI GACGC 2 cut(s) 741, 1139
Hin1II CATG 4 cut(s) 328, 553, 619, 1159
HincII GTYRAC 2 cut(s) 425, 708
HindII GTYRAC 2 cut(s) 425, 708
HindIII AAGCTT 1 cut(s) 119
HinfI GANTC 5 cut(s) 161, 487, 596, 819, 1373
HpaII CCGG 3 cut(s) 43, 1266, 1307
HphI GGTGA 3 cut(s) 551, 1010, 1296
Hpy166II GTNNAC 5 cut(s) 425, 708, 1010, 1304, 1377
Hpy188I TCNGA 6 cut(s) 68, 96, 438, 813, 1033, 1321
Hpy188III TCNNGA 9 cut(s) 272, 827, 842, 883, 1056, 1074, 1086, 1202, 1341
Hpy8I GTNNAC 5 cut(s) 425, 708, 1010, 1304, 1377
Hpy99I CGWCG 2 cut(s) 429, 757
HpyAV CCTTC 5 cut(s) 221, 839, 998, 1253, 1326
HpyCH4III ACNGT 6 cut(s) 319, 386, 770, 970, 1331, 1428
HpyCH4IV ACGT 1 cut(s) 207
HpyCH4V TGCA 8 cut(s) 294, 332, 536, 545, 974, 1106, 1187, 1402
HpyF10VI GCNNNNNNNGC 2 cut(s) 542, 1214
HpyF3I CTNAG 3 cut(s) 465, 626, 1369
HpySE526I ACGT 1 cut(s) 207
Hsp92II CATG 4 cut(s) 328, 553, 619, 1159
Ksp22I TGATCA 1 cut(s) 342
KspI CCGCGG 1 cut(s) 17
LmnI GCTCC 1 cut(s) 10
Lsp1109I GCAGC 2 cut(s) 1090, 1171
LweI GCATC 2 cut(s) 151, 1195
MaeI CTAG 5 cut(s) 80, 267, 1194, 1218, 1274
MaeII ACGT 1 cut(s) 207
MaeIII GTNAC 1 cut(s) 897
MboII GAAGA 7 cut(s) 58, 287, 629, 697, 826, 1329, 1356
MfeI CAATTG 1 cut(s) 149
MflI RGATCY 3 cut(s) 59, 72, 1033
MhlI GDGCHC 2 cut(s) 615, 953
MlsI TGGCCA 1 cut(s) 1293
MluCI AATT 7 cut(s) 149, 302, 403, 520, 1069, 1150, 1281
MluNI TGGCCA 1 cut(s) 1293
MlyI GAGTC 3 cut(s) 481, 813, 1382
Mox20I TGGCCA 1 cut(s) 1293
MroXI GAANNNNTTC 2 cut(s) 849, 1351
MscI TGGCCA 1 cut(s) 1293
MseI TTAA 5 cut(s) 117, 312, 393, 1407, 1432
Msp20I TGGCCA 1 cut(s) 1293
MspA1I CMGCKG 1 cut(s) 16
MspCI CTTAAG 1 cut(s) 311
MspI CCGG 3 cut(s) 43, 1266, 1307
MspR9I CCNGG 1 cut(s) 1266
MunI CAATTG 1 cut(s) 149
MvnI CGCG 1 cut(s) 16
MwoI GCNNNNNNNGC 2 cut(s) 542, 1214
NciI CCSGG 1 cut(s) 1266
NheI GCTAGC 1 cut(s) 1217
NlaIII CATG 4 cut(s) 328, 553, 619, 1159
NlaIV GGNNCC 2 cut(s) 12, 264
NmuCI GTSAC 1 cut(s) 897
PdmI GAANNNNTTC 2 cut(s) 849, 1351
PfeI GAWTC 2 cut(s) 161, 596
PflFI GACNNNGTC 1 cut(s) 267
PfoI TCCNGGA 1 cut(s) 1264
PinAI ACCGGT 1 cut(s) 1306
PkrI GCNGC 5 cut(s) 15, 26, 581, 1105, 1186
PleI GAGTC 3 cut(s) 481, 813, 1381
PpsI GAGTC 3 cut(s) 481, 813, 1381
PpuMI RGGWCCY 1 cut(s) 263
PshAI GACNNNNGTC 1 cut(s) 456
Psp124BI GAGCTC 1 cut(s) 953
Psp5II RGGWCCY 1 cut(s) 263
PspN4I GGNNCC 2 cut(s) 12, 264
PspPI GGNCC 4 cut(s) 263, 932, 944, 1058
PspPPI RGGWCCY 1 cut(s) 263
PstI CTGCAG 1 cut(s) 1189
PsuI RGATCY 3 cut(s) 59, 72, 1033
PsyI GACNNNGTC 1 cut(s) 267
RsaI GTAC 6 cut(s) 85, 532, 620, 758, 1333, 1425
RsaNI GTAC 6 cut(s) 84, 531, 619, 757, 1332, 1424
SacI GAGCTC 1 cut(s) 953
SacII CCGCGG 1 cut(s) 17
SalI GTCGAC 1 cut(s) 423
SaqAI TTAA 5 cut(s) 117, 312, 393, 1407, 1432
SatI GCNGC 5 cut(s) 14, 25, 580, 1104, 1185
Sau96I GGNCC 4 cut(s) 263, 932, 944, 1058
SchI GAGTC 3 cut(s) 481, 813, 1382
ScrFI CCNGG 1 cut(s) 1266
SduI GDGCHC 2 cut(s) 615, 953
SfaNI GCATC 2 cut(s) 151, 1195
SfcI CTRYAG 3 cut(s) 182, 769, 1185
Sfr303I CCGCGG 1 cut(s) 17
SgrBI CCGCGG 1 cut(s) 17
SinI GGWCC 4 cut(s) 263, 932, 944, 1058
SmlI CTYRAG 2 cut(s) 311, 1382
SmoI CTYRAG 2 cut(s) 311, 1382
Sse9I AATT 7 cut(s) 149, 302, 403, 520, 1069, 1150, 1281
SsiI CCGC 6 cut(s) 14, 16, 24, 57, 580, 1159
SspI AATATT 2 cut(s) 91, 1351
SspMI CTAG 5 cut(s) 80, 267, 1194, 1218, 1274
SstI GAGCTC 1 cut(s) 953
StyD4I CCNGG 1 cut(s) 1264
StyI CCWWGG 3 cut(s) 79, 562, 641
TaaI ACNGT 6 cut(s) 319, 386, 770, 970, 1331, 1428
TaiI ACGT 1 cut(s) 210
TaqI TCGA 7 cut(s) 34, 349, 424, 485, 713, 922, 1175
TaqII GACCGA 2 cut(s) 446, 961
TasI AATT 7 cut(s) 149, 302, 403, 520, 1069, 1150, 1281
TatI WGTACW 2 cut(s) 618, 1423
TauI GCSGC 3 cut(s) 16, 27, 582
TfiI GAWTC 2 cut(s) 161, 596
Tru1I TTAA 5 cut(s) 117, 312, 393, 1407, 1432
Tru9I TTAA 5 cut(s) 117, 312, 393, 1407, 1432
TscAI CASTG 4 cut(s) 229, 697, 973, 1228
TseFI GTSAC 1 cut(s) 897
TseI GCWGC 2 cut(s) 1103, 1184
Tsp45I GTSAC 1 cut(s) 897
TspDTI ATGAA 4 cut(s) 174, 353, 566, 1144
TspRI CASTG 4 cut(s) 229, 697, 973, 1228
Tth111I GACNNNGTC 1 cut(s) 267
Vha464I CTTAAG 1 cut(s) 311
VpaK11BI GGWCC 4 cut(s) 263, 932, 944, 1058
XagI CCTNNNNNAGG 1 cut(s) 1042
XapI RAATTY 3 cut(s) 520, 1069, 1281
XcmI CCANNNNNNNNNTGG 1 cut(s) 210
XmaJI CCTAGG 1 cut(s) 79
XmiI GTMKAC 2 cut(s) 424, 1009
XmnI GAANNNNTTC 2 cut(s) 849, 1351
XspI CTAG 5 cut(s) 80, 267, 1194, 1218, 1274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.