Rw2G035830
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
58904623 .. 58908996
4374 bp
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UTR
Exon/CDS
Intron
Rw2G035830.1

Sequence Viewer

Length: 1419 bp
ATGGTGGCATATCATCATCATCAAGAAAATGTCAAGACAAAGCATCCACAGTTGCTGTATGAGTCGAAGTTGTATAAAATACTACAGGGAGGAACTGGAATTCCAAATGTGCGATGGTTTGGCACCGAAGGAGACTACAATGTTCTTGTGATGGATTTATTGGGACCTAGTCTTGAGGATTTATTCAACTTTTGCAGTAGGAAGTTGTCTCTTAAGACTGTTCTCATGCTTGCAGATCAAATGATAAATCGAGTGGAGTTTGTTCATTCCAAGTCTTTTCTACATCGGGATATCAAACCAGACAAGTTCCTAATGGGATGGGGTCGTCGGGCAAATCAGATTTACATCATTGACTTTGGCCTCGCTAAGAAGTATAGAGACACATCAACCCATCAGCATATTCCTTATAGAGATAATAAGAATTTGACTGGGACAGCAAGATATGCAAGCATGAATACTCATCTTGGCATTGAACAAAGCCGAAGGGATGATCTCGAGTCACTTGGATATGTGCTTATGTACTTCCTAAGAGGAAGTCTTCCATGGCAGGGATTTAAGGCTGGAACTAAAAAGCAGAAGTATGAGAAGATCAGTGAAAAGAAAGTGTCAACATCAATTGAGGCCTTATGCCGTGGTTATCCCACCGAATTTGCCTCATACTTCCATTACTGTAGATCTCTACGTTTTGATGATAAACCAGATTATGCTTATCTGAAGAGATTGTTTCGTGACCTTTTTATTCGCGAAGGTTTTCAGTTTGATTATGTCTTTGATTGGACGATCTTGAAATATCAGCAGTCGCAGATTGCCACACCTCCTACTCGTGCTCCTGGTGGTGCTGGACCAAGCTCTGGACTGCCTCCAGTTGTTGCAAATGTTGAAAGACAATCAGGTGGGGAGGAAGTTAGACCTACTGGTTGGTCGTTGGCAGATCCCTCACGTAGGAGAAATTCTGGACCGATTGTAAATCCTGGAAGCTTGTCTAAACAAAAAAGTCCTGTTGCAAATGATCCATCTGTGTCTAAAGACGCAATGTTATCAAGTTCTAGTTTTTTGCGGTCAACTGGATCATCAAGGAGGGCTGTAGTTTCTAGCAGTCGGGATGCAGTAATTGTTGGCAGTGAATCCGAGCCCTCTCGCCCTCAAACCACAGAGGCAAGTCCTGGAACACTAGGTAAAATTTCTTCTGTCCAAAGAAGTTCACCAGTTGTATCTTCAGAGCAGAATCGTACCACTTCTGGTAGAAATATTTCGACCGTAAAAAACTTAAGTCCACCCTCAGAGGTATTGAGACCCTTCATTTTAATAGCGATGAGAGAGTACAGTATTAGCAATCGCTTCTCTCAATATGTCGCCCACTGTAAATTTGAAAAACGGTATACAGTTCTCACACACTTCGGGTGGAATTTGTTTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

472

Amino Acids

53.46

Weight (kDa)

9.73

Isoelectric Point (pI)

55.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 8 - 196 5.3e-17 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 42 - 202 2.1e-07 Protein tyrosine and serine/threonine kinase
Pkinase_fungal PF17667 79 - 175 8.3e-07 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 122
AccB7I CCANNNNNTGG 1 cut(s) 851
AccI GTMKAC 1 cut(s) 1379
AccII CGCG 1 cut(s) 744
AciI CCGC 1 cut(s) 1057
AclWI GGATC 3 cut(s) 926, 1004, 1075
AcsI RAATTY 7 cut(s) 99, 421, 647, 949, 1179, 1364, 1405
AcuI CTGAAG 2 cut(s) 734, 1200
AfaI GTAC 3 cut(s) 521, 1231, 1322
AfiI CCNNNNNNNGG 3 cut(s) 548, 851, 942
AflII CTTAAG 2 cut(s) 212, 1267
AgsI TTSAA 5 cut(s) 187, 473, 787, 881, 1370
AjnI CCWGG 3 cut(s) 829, 970, 1162
AloI GAACNNNNNNTCC 2 cut(s) 85, 117
AluBI AGCT 2 cut(s) 849, 978
AluI AGCT 2 cut(s) 849, 978
Alw21I GWGCWC 1 cut(s) 829
Alw26I GTCTC 4 cut(s) 126, 213, 372, 1285
AlwI GGATC 3 cut(s) 926, 1004, 1075
AlwNI CAGNNNCTG 1 cut(s) 55
Ama87I CYCGRG 1 cut(s) 494
AoxI GGCC 2 cut(s) 358, 621
ApoI RAATTY 7 cut(s) 99, 421, 647, 949, 1179, 1364, 1405
Asp700I GAANNNNTTC 2 cut(s) 750, 1249
AspS9I GGNCC 3 cut(s) 164, 842, 956
AsuHPI GGTGA 1 cut(s) 1194
AvaI CYCGRG 1 cut(s) 494
AvaII GGWCC 3 cut(s) 164, 842, 956
BanI GGYRCC 1 cut(s) 122
BanII GRGCYC 1 cut(s) 1134
BarI GAAGNNNNNNTAC 2 cut(s) 1168, 1200
BauI CACGAG 1 cut(s) 822
BbsI GAAGAC 1 cut(s) 530
Bbv12I GWGCWC 1 cut(s) 829
BccI CCATC 5 cut(s) 108, 145, 312, 399, 1021
BceAI ACGGC 1 cut(s) 615
BciT130I CCWGG 3 cut(s) 831, 972, 1164
BcoDI GTCTC 4 cut(s) 126, 213, 372, 1285
BfaI CTAG 4 cut(s) 168, 1047, 1092, 1172
BfmI CTRYAG 3 cut(s) 83, 670, 1083
BfrI CTTAAG 2 cut(s) 212, 1267
BglII AGATCT 1 cut(s) 674
Bme1390I CCNGG 3 cut(s) 831, 972, 1164
Bme18I GGWCC 3 cut(s) 164, 842, 956
BmeT110I CYCGRG 1 cut(s) 494
BmgT120I GGNCC 3 cut(s) 164, 842, 956
BmiI GGNNCC 2 cut(s) 124, 165
BmrFI CCNGG 3 cut(s) 831, 972, 1164
BmrI ACTGGG 1 cut(s) 438
BmsI GCATC 2 cut(s) 52, 1093
BmuI ACTGGG 1 cut(s) 438
BpiI GAAGAC 1 cut(s) 530
BpmI CTGGAG 1 cut(s) 846
BpuEI CTTGAG 1 cut(s) 194
BsaAI YACGTR 1 cut(s) 941
BsaBI GATNNNNATC 1 cut(s) 344
BsaI GGTCTC 1 cut(s) 1285
BsaJI CCNNGG 2 cut(s) 542, 631
BsaXI ACNNNNNCTCC 2 cut(s) 811, 841
Bsc4I CCNNNNNNNGG 3 cut(s) 548, 851, 942
Bse1I ACTGG 6 cut(s) 100, 433, 863, 919, 1069, 1205
Bse3DI GCAATG 1 cut(s) 1038
Bse8I GATNNNNATC 1 cut(s) 344
BseBI CCWGG 3 cut(s) 831, 972, 1164
BseDI CCNNGG 2 cut(s) 542, 631
BseGI GGATG 4 cut(s) 43, 323, 493, 1108
BseJI GATNNNNATC 1 cut(s) 344
BseLI CCNNNNNNNGG 3 cut(s) 548, 851, 942
BseMI GCAATG 1 cut(s) 1038
BseMII CTCAG 1 cut(s) 1293
BseNI ACTGG 6 cut(s) 100, 433, 863, 919, 1069, 1205
Bsh1236I CGCG 1 cut(s) 744
Bsh1285I CGRYCG 1 cut(s) 1257
BshFI GGCC 2 cut(s) 360, 623
BshNI GGYRCC 1 cut(s) 122
BsiEI CGRYCG 1 cut(s) 1257
BsiHKAI GWGCWC 1 cut(s) 829
BsiHKCI CYCGRG 1 cut(s) 494
BslFI GGGAC 2 cut(s) 177, 445
BslI CCNNNNNNNGG 3 cut(s) 548, 851, 942
BsmAI GTCTC 4 cut(s) 126, 213, 372, 1285
BsmFI GGGAC 2 cut(s) 177, 445
BsnI GGCC 2 cut(s) 360, 623
Bso31I GGTCTC 1 cut(s) 1285
BsoBI CYCGRG 1 cut(s) 494
Bsp1286I GDGCHC 2 cut(s) 829, 1134
Bsp143I GATC 8 cut(s) 235, 490, 588, 674, 780, 931, 1009, 1067
Bsp19I CCATGG 1 cut(s) 542
Bsp68I TCGCGA 1 cut(s) 744
BspACI CCGC 1 cut(s) 1057
BspANI GGCC 2 cut(s) 360, 623
BspCNI CTCAG 1 cut(s) 1292
BspFNI CGCG 1 cut(s) 744
BspLI GGNNCC 2 cut(s) 124, 165
BspPI GGATC 3 cut(s) 926, 1004, 1075
BspT107I GGYRCC 1 cut(s) 122
BspTI CTTAAG 2 cut(s) 212, 1267
BspTNI GGTCTC 1 cut(s) 1285
BsrDI GCAATG 1 cut(s) 1038
BsrI ACTGG 6 cut(s) 100, 433, 863, 919, 1069, 1205
BssECI CCNNGG 2 cut(s) 542, 631
BssMI GATC 8 cut(s) 235, 490, 588, 674, 780, 931, 1009, 1067
BssNAI GTATAC 1 cut(s) 1380
BssSI CACGAG 1 cut(s) 822
BssT1I CCWWGG 1 cut(s) 542
Bst1107I GTATAC 1 cut(s) 1380
Bst2BI CACGAG 1 cut(s) 822
Bst2UI CCWGG 3 cut(s) 831, 972, 1164
Bst4CI ACNGT 8 cut(s) 51, 220, 671, 1258, 1325, 1361, 1377, 1384
Bst6I CTCTTC 1 cut(s) 710
BstAFI CTTAAG 2 cut(s) 212, 1267
BstAPI GCANNNNNTGC 1 cut(s) 443
BstBAI YACGTR 1 cut(s) 941
BstC8I GCNNGC 2 cut(s) 231, 448
BstDEI CTNAG 3 cut(s) 366, 527, 1279
BstDSI CCRYGG 2 cut(s) 542, 631
BstENI CCTNNNNNAGG 1 cut(s) 940
BstF5I GGATG 4 cut(s) 43, 323, 493, 1108
BstFNI CGCG 1 cut(s) 744
BstKTI GATC 8 cut(s) 238, 493, 591, 677, 783, 934, 1012, 1070
BstMAI GTCTC 4 cut(s) 126, 213, 372, 1285
BstMBI GATC 8 cut(s) 235, 490, 588, 674, 780, 931, 1009, 1067
BstMCI CGRYCG 1 cut(s) 1257
BstMWI GCNNNNNNNGC 1 cut(s) 443
BstNI CCWGG 3 cut(s) 831, 972, 1164
BstSCI CCNGG 3 cut(s) 829, 970, 1162
BstSFI CTRYAG 3 cut(s) 83, 670, 1083
BstUI CGCG 1 cut(s) 744
BstV2I GAAGAC 1 cut(s) 530
BstX2I RGATCY 2 cut(s) 674, 931
BstYI RGATCY 2 cut(s) 674, 931
BstZ17I GTATAC 1 cut(s) 1380
BsuRI GGCC 2 cut(s) 360, 623
BtgI CCRYGG 2 cut(s) 542, 631
BtgZI GCGATG 2 cut(s) 127, 1325
BtsCI GGATG 4 cut(s) 43, 323, 493, 1108
BtsI GCAGTG 1 cut(s) 1126
BtsIMutI CAGTG 3 cut(s) 598, 1126, 1357
BtuMI TCGCGA 1 cut(s) 744
Cac8I GCNNGC 2 cut(s) 231, 448
CaiI CAGNNNCTG 1 cut(s) 55
Cfr13I GGNCC 3 cut(s) 164, 842, 956
CseI GACGC 1 cut(s) 1037
Csp6I GTAC 3 cut(s) 520, 1230, 1321
CspCI CAANNNNNGTGG 2 cut(s) 631, 666
CviAII CATG 3 cut(s) 226, 451, 543
CviJI RGCY 8 cut(s) 360, 480, 560, 623, 849, 978, 1082, 1132
CviKI_1 RGCY 8 cut(s) 360, 480, 560, 623, 849, 978, 1082, 1132
CviQI GTAC 3 cut(s) 520, 1230, 1321
DdeI CTNAG 3 cut(s) 366, 527, 1279
DpnI GATC 8 cut(s) 237, 492, 590, 676, 782, 933, 1011, 1069
DpnII GATC 8 cut(s) 235, 490, 588, 674, 780, 931, 1009, 1067
Eam1104I CTCTTC 1 cut(s) 710
EarI CTCTTC 1 cut(s) 710
Eco130I CCWWGG 1 cut(s) 542
Eco147I AGGCCT 1 cut(s) 623
Eco24I GRGCYC 1 cut(s) 1134
Eco31I GGTCTC 1 cut(s) 1285
Eco32I GATATC 1 cut(s) 292
Eco47I GGWCC 3 cut(s) 164, 842, 956
Eco57I CTGAAG 2 cut(s) 734, 1200
Eco88I CYCGRG 1 cut(s) 494
EcoNI CCTNNNNNAGG 1 cut(s) 940
EcoO109I RGGNCCY 1 cut(s) 164
EcoRI GAATTC 1 cut(s) 99
EcoRII CCWGG 3 cut(s) 829, 970, 1162
EcoRV GATATC 1 cut(s) 292
EcoT14I CCWWGG 1 cut(s) 542
EcoT38I GRGCYC 1 cut(s) 1134
ErhI CCWWGG 1 cut(s) 542
FaeI CATG 3 cut(s) 229, 454, 546
FaqI GGGAC 2 cut(s) 177, 445
FatI CATG 3 cut(s) 225, 450, 542
FblI GTMKAC 1 cut(s) 1379
FokI GGATG 4 cut(s) 30, 330, 500, 1115
FriOI GRGCYC 1 cut(s) 1134
FspBI CTAG 4 cut(s) 168, 1047, 1092, 1172
GsuI CTGGAG 1 cut(s) 846
HaeIII GGCC 2 cut(s) 360, 623
HgaI GACGC 1 cut(s) 1037
Hin1II CATG 3 cut(s) 229, 454, 546
HincII GTYRAC 2 cut(s) 609, 1062
HindII GTYRAC 2 cut(s) 609, 1062
HindIII AAGCTT 1 cut(s) 976
HinfI GANTC 4 cut(s) 62, 497, 1124, 1225
HphI GGTGA 1 cut(s) 1194
Hpy166II GTNNAC 5 cut(s) 609, 1062, 1202, 1274, 1380
Hpy188I TCNGA 5 cut(s) 339, 714, 1129, 1219, 1282
Hpy8I GTNNAC 5 cut(s) 609, 1062, 1202, 1274, 1380
Hpy99I CGWCG 1 cut(s) 330
HpyAV CCTTC 4 cut(s) 122, 477, 740, 1306
HpyCH4III ACNGT 8 cut(s) 51, 220, 671, 1258, 1325, 1361, 1377, 1384
HpyCH4IV ACGT 2 cut(s) 682, 940
HpyCH4V TGCA 6 cut(s) 195, 233, 446, 872, 1004, 1106
HpyF10VI GCNNNNNNNGC 1 cut(s) 443
HpyF3I CTNAG 3 cut(s) 366, 527, 1279
HpySE526I ACGT 2 cut(s) 682, 940
Hsp92II CATG 3 cut(s) 229, 454, 546
Kzo9I GATC 8 cut(s) 235, 490, 588, 674, 780, 931, 1009, 1067
LmnI GCTCC 1 cut(s) 832
LweI GCATC 2 cut(s) 52, 1093
MaeI CTAG 4 cut(s) 168, 1047, 1092, 1172
MaeII ACGT 2 cut(s) 682, 940
MaeIII GTNAC 2 cut(s) 498, 728
MalI GATC 8 cut(s) 237, 492, 590, 676, 782, 933, 1011, 1069
MboI GATC 8 cut(s) 235, 490, 588, 674, 780, 931, 1009, 1067
MboII GAAGA 5 cut(s) 530, 598, 727, 1176, 1206
MfeI CAATTG 1 cut(s) 615
MflI RGATCY 2 cut(s) 674, 931
MhlI GDGCHC 2 cut(s) 829, 1134
MluCI AATT 9 cut(s) 99, 421, 615, 647, 949, 1110, 1179, 1364, 1405
MlyI GAGTC 2 cut(s) 71, 506
MroXI GAANNNNTTC 2 cut(s) 750, 1249
MseI TTAA 5 cut(s) 213, 555, 1268, 1304, 1417
MspCI CTTAAG 2 cut(s) 212, 1267
MspR9I CCNGG 3 cut(s) 831, 972, 1164
MunI CAATTG 1 cut(s) 615
MvaI CCWGG 3 cut(s) 831, 972, 1164
MvnI CGCG 1 cut(s) 744
MwoI GCNNNNNNNGC 1 cut(s) 443
NcoI CCATGG 1 cut(s) 542
NdeII GATC 8 cut(s) 235, 490, 588, 674, 780, 931, 1009, 1067
NlaIII CATG 3 cut(s) 229, 454, 546
NlaIV GGNNCC 2 cut(s) 124, 165
NmuCI GTSAC 2 cut(s) 498, 728
NruI TCGCGA 1 cut(s) 744
PaeR7I CTCGAG 1 cut(s) 494
PceI AGGCCT 1 cut(s) 623
PdmI GAANNNNTTC 2 cut(s) 750, 1249
PfeI GAWTC 2 cut(s) 1124, 1225
PflFI GACNNNGTC 1 cut(s) 168
PflMI CCANNNNNTGG 1 cut(s) 851
PfoI TCCNGGA 2 cut(s) 970, 1162
PleI GAGTC 2 cut(s) 70, 505
PpsI GAGTC 2 cut(s) 70, 505
Ppu21I YACGTR 1 cut(s) 941
PpuMI RGGWCCY 1 cut(s) 164
Psp5II RGGWCCY 1 cut(s) 164
Psp6I CCWGG 3 cut(s) 829, 970, 1162
PspGI CCWGG 3 cut(s) 829, 970, 1162
PspN4I GGNNCC 2 cut(s) 124, 165
PspPI GGNCC 3 cut(s) 164, 842, 956
PspPPI RGGWCCY 1 cut(s) 164
PstNI CAGNNNCTG 1 cut(s) 55
PsuI RGATCY 2 cut(s) 674, 931
PsyI GACNNNGTC 1 cut(s) 168
RruI TCGCGA 1 cut(s) 744
RsaI GTAC 3 cut(s) 521, 1231, 1322
RsaNI GTAC 3 cut(s) 520, 1230, 1321
SaqAI TTAA 5 cut(s) 213, 555, 1268, 1304, 1417
Sau3AI GATC 8 cut(s) 235, 490, 588, 674, 780, 931, 1009, 1067
Sau96I GGNCC 3 cut(s) 164, 842, 956
SchI GAGTC 2 cut(s) 71, 506
ScrFI CCNGG 3 cut(s) 831, 972, 1164
SduI GDGCHC 2 cut(s) 829, 1134
SfaNI GCATC 2 cut(s) 52, 1093
SfcI CTRYAG 3 cut(s) 83, 670, 1083
Sfr274I CTCGAG 1 cut(s) 494
SinI GGWCC 3 cut(s) 164, 842, 956
SlaI CTCGAG 1 cut(s) 494
SmlI CTYRAG 4 cut(s) 173, 212, 494, 1267
SmoI CTYRAG 4 cut(s) 173, 212, 494, 1267
Sse9I AATT 9 cut(s) 99, 421, 615, 647, 949, 1110, 1179, 1364, 1405
SseBI AGGCCT 1 cut(s) 623
SsiI CCGC 1 cut(s) 1057
SspI AATATT 1 cut(s) 1249
SspMI CTAG 4 cut(s) 168, 1047, 1092, 1172
StuI AGGCCT 1 cut(s) 623
StyD4I CCNGG 3 cut(s) 829, 970, 1162
StyI CCWWGG 1 cut(s) 542
TaaI ACNGT 8 cut(s) 51, 220, 671, 1258, 1325, 1361, 1377, 1384
TaiI ACGT 2 cut(s) 685, 943
TaqI TCGA 4 cut(s) 65, 250, 495, 1253
TaqII GACCGA 1 cut(s) 973
TasI AATT 9 cut(s) 99, 421, 615, 647, 949, 1110, 1179, 1364, 1405
TatI WGTACW 2 cut(s) 519, 1320
TfiI GAWTC 2 cut(s) 1124, 1225
Tru1I TTAA 5 cut(s) 213, 555, 1268, 1304, 1417
Tru9I TTAA 5 cut(s) 213, 555, 1268, 1304, 1417
TscAI CASTG 3 cut(s) 598, 1126, 1364
TseFI GTSAC 2 cut(s) 498, 728
Tsp45I GTSAC 2 cut(s) 498, 728
TspDTI ATGAA 3 cut(s) 254, 467, 1288
TspRI CASTG 3 cut(s) 598, 1126, 1364
Tth111I GACNNNGTC 1 cut(s) 168
Van91I CCANNNNNTGG 1 cut(s) 851
Vha464I CTTAAG 2 cut(s) 212, 1267
VpaK11BI GGWCC 3 cut(s) 164, 842, 956
XagI CCTNNNNNAGG 1 cut(s) 940
XapI RAATTY 7 cut(s) 99, 421, 647, 949, 1179, 1364, 1405
XcmI CCANNNNNNNNNTGG 1 cut(s) 111
XhoI CTCGAG 1 cut(s) 494
XmiI GTMKAC 1 cut(s) 1379
XmnI GAANNNNTTC 2 cut(s) 750, 1249
XspI CTAG 4 cut(s) 168, 1047, 1092, 1172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.