Rmu_sc0002354.1_g000001
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002354.1
Physical Location & Seq
Reverse (-)
1 .. 11811
11811 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002354.1_g000001.1.cds

Sequence Viewer

Length: 1729 bp
atgatggacgccatccatggcatcatggatagggactgtgccagccctagactggtggtggacggaggtggtgacctaggtttctatgaaatggtttggattcagaagggtagaagttcgacattttacaagaggttagcctttttcagtgtcctagaattcagagcttctgcagatccaaaggagcttcctgaaggtagctggtattgtctgcattgcacctgttctgctgatgataaagaggcttcaagcacttctgatggatttcaatgtcttcaacaactcaacaacaacaacaacaacaaaagaggggccaagaggtcatccagaaaccttgacgaagagaagggttctgcttctgctatcacttgtgcagtactggataaagataaggaacaccgaatcaaacggctaagggaacaggctcgtaaggaaattttgagggttgaagaggctgctcgattgaaagtcgagaatcctttacaagatcttcaacaactcaacttgttgtgcagtggtggcatcaaacaggattcttgttacagggtgtatcgttggttgacacttgacaagttgggcatctatttgaagagggatgaacttgaacatgtttatgaagaggatgaatttcgcattggagattgggaagaaggagactacaatgttcttgtgatggatttattgggacctagtcttgaggatttattcaacttttgcagtaggaagttgtctcttaagactgttctcatgcttgcagatcaaatgataaatcgagtggagtttgttcattccaagtcttttctacatcgggatatcaaaccagacaagttcctaatgggattgggtcgtcgggcaaatcagatttacatcattgacttcggcctcgctaagaagtatagagacacatcaacccatcagcatattccttatagagataataagaatttgactgggacagcaagatatgcaagcatgaatactcatcttggcattgaacaaagccgaagggatgatctcgagtcacttggatatgtgcttatgtacttcctaagaggaagtcttccatggcagggattgaaggctggaactaaaaagcagaagtatgagaagatcagtgaaaagaaagtgtcaacatcaattgaggccttatgccgtggttatcccaccgaatttgcctcatacttccatgactgtagatctctactttttgatgataaaccagattatgcttatctgaagagattgtttcgtgacctttttattcgcgaagagttcttaacatattgctgtcttattacgccaggttttcagtttgattatgtctttgattggacgatcttgaaatatcagcagtcgcagattgccacacctcctactcgtgctcctggtggtgctggaccaagctctggactgcctccagttgttgcaaatgttgaaagacaatcaggaggggaggaagttagacctactggttggtcgttggcagatccctcacgtaggagaaattctggaccgattgtaaatcctggaagcttgtctaaacaacaaagtcctgttgcaaatgatccatctgtgtctaaagacgcaatgttatcaagttctagttttttgcggtcaactggatcatcaaggagggctgtagtttctagtagtcgggatgcagtaattgttggcagtgaatccgagccctctcgccctcaaaccacagaggcaagtcctggaacactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

576

Amino Acids

65.25

Weight (kDa)

8.27

Isoelectric Point (pI)

53.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1406
AccII CGCG 1 cut(s) 1266
AciI CCGC 1 cut(s) 1612
AclWI GGATC 4 cut(s) 170, 1481, 1559, 1630
AcsI RAATTY 6 cut(s) 158, 435, 626, 943, 1169, 1504
AcuI CTGAAG 2 cut(s) 213, 1256
AcyI GRCGYC 1 cut(s) 9
AfaI GTAC 2 cut(s) 378, 1043
AfiI CCNNNNNNNGG 4 cut(s) 52, 1070, 1406, 1497
AflII CTTAAG 1 cut(s) 734
AflIII ACRYGT 1 cut(s) 607
AjnI CCWGG 4 cut(s) 1300, 1384, 1525, 1717
AjuI GAANNNNNNNTTGG 2 cut(s) 618, 650
AluBI AGCT 5 cut(s) 167, 187, 201, 1404, 1533
AluI AGCT 5 cut(s) 167, 187, 201, 1404, 1533
Alw21I GWGCWC 1 cut(s) 1384
Alw26I GTCTC 3 cut(s) 648, 735, 894
AlwI GGATC 4 cut(s) 170, 1481, 1559, 1630
Ama87I CYCGRG 1 cut(s) 1016
AoxI GGCC 3 cut(s) 312, 880, 1143
ApeKI GCWGC 1 cut(s) 455
ApoI RAATTY 6 cut(s) 158, 435, 626, 943, 1169, 1504
AspA2I CCTAGG 1 cut(s) 76
AspS9I GGNCC 4 cut(s) 312, 686, 1397, 1511
AsuHPI GGTGA 1 cut(s) 83
AvaI CYCGRG 1 cut(s) 1016
AvaII GGWCC 3 cut(s) 686, 1397, 1511
AvrII CCTAGG 1 cut(s) 76
BanII GRGCYC 1 cut(s) 1689
BauI CACGAG 1 cut(s) 1377
BbsI GAAGAC 2 cut(s) 266, 1052
Bbv12I GWGCWC 1 cut(s) 1384
BbvI GCAGC 1 cut(s) 442
BccI CCATC 5 cut(s) 20, 254, 667, 921, 1576
BceAI ACGGC 2 cut(s) 425, 1137
BciT130I CCWGG 4 cut(s) 1302, 1386, 1527, 1719
BcoDI GTCTC 3 cut(s) 648, 735, 894
BfaI CTAG 7 cut(s) 48, 77, 155, 690, 1602, 1647, 1727
BfmI CTRYAG 3 cut(s) 171, 1192, 1638
BfrI CTTAAG 1 cut(s) 734
BglII AGATCT 2 cut(s) 487, 1196
BisI GCNGC 1 cut(s) 456
BlnI CCTAGG 1 cut(s) 76
BlsI GCNGC 1 cut(s) 457
BmcAI AGTACT 1 cut(s) 378
Bme1390I CCNGG 4 cut(s) 1302, 1386, 1527, 1719
Bme18I GGWCC 3 cut(s) 686, 1397, 1511
BmeT110I CYCGRG 1 cut(s) 1016
BmgT120I GGNCC 4 cut(s) 312, 686, 1397, 1511
BmiI GGNNCC 2 cut(s) 313, 687
BmrFI CCNGG 4 cut(s) 1302, 1386, 1527, 1719
BmrI ACTGGG 1 cut(s) 960
BmsI GCATC 4 cut(s) 30, 531, 588, 1648
BmuI ACTGGG 1 cut(s) 960
BpiI GAAGAC 2 cut(s) 266, 1052
BpmI CTGGAG 1 cut(s) 1401
Bpu10I CCTNAGC 1 cut(s) 413
BpuEI CTTGAG 1 cut(s) 716
BsaAI YACGTR 1 cut(s) 1496
BsaBI GATNNNNATC 1 cut(s) 866
BsaHI GRCGYC 1 cut(s) 9
BsaJI CCNNGG 4 cut(s) 16, 76, 1064, 1153
BsaXI ACNNNNNCTCC 2 cut(s) 1366, 1396
Bsc4I CCNNNNNNNGG 4 cut(s) 52, 1070, 1406, 1497
Bse1I ACTGG 6 cut(s) 57, 384, 955, 1418, 1474, 1624
Bse3DI GCAATG 2 cut(s) 214, 1593
Bse8I GATNNNNATC 1 cut(s) 866
BseBI CCWGG 4 cut(s) 1302, 1386, 1527, 1719
BseDI CCNNGG 4 cut(s) 16, 76, 1064, 1153
BseGI GGATG 6 cut(s) 12, 323, 601, 628, 1015, 1663
BseJI GATNNNNATC 1 cut(s) 866
BseLI CCNNNNNNNGG 4 cut(s) 52, 1070, 1406, 1497
BseMI GCAATG 2 cut(s) 214, 1593
BseNI ACTGG 6 cut(s) 57, 384, 955, 1418, 1474, 1624
BseXI GCAGC 1 cut(s) 442
BsgI GTGCAG 2 cut(s) 393, 532
Bsh1236I CGCG 1 cut(s) 1266
BshFI GGCC 3 cut(s) 314, 882, 1145
BsiHKAI GWGCWC 1 cut(s) 1384
BsiHKCI CYCGRG 1 cut(s) 1016
BslFI GGGAC 3 cut(s) 47, 699, 967
BslI CCNNNNNNNGG 4 cut(s) 52, 1070, 1406, 1497
BsmAI GTCTC 3 cut(s) 648, 735, 894
BsmFI GGGAC 3 cut(s) 47, 699, 967
BsnI GGCC 3 cut(s) 314, 882, 1145
BsoBI CYCGRG 1 cut(s) 1016
Bsp1286I GDGCHC 2 cut(s) 1384, 1689
Bsp19I CCATGG 2 cut(s) 16, 1064
Bsp68I TCGCGA 1 cut(s) 1266
BspACI CCGC 1 cut(s) 1612
BspANI GGCC 3 cut(s) 314, 882, 1145
BspFNI CGCG 1 cut(s) 1266
BspLI GGNNCC 2 cut(s) 313, 687
BspMAI CTGCAG 1 cut(s) 175
BspPI GGATC 4 cut(s) 170, 1481, 1559, 1630
BspTI CTTAAG 1 cut(s) 734
BsrDI GCAATG 2 cut(s) 214, 1593
BsrI ACTGG 6 cut(s) 57, 384, 955, 1418, 1474, 1624
BssECI CCNNGG 4 cut(s) 16, 76, 1064, 1153
BssNI GRCGYC 1 cut(s) 9
BssSI CACGAG 1 cut(s) 1377
BssT1I CCWWGG 3 cut(s) 16, 76, 1064
Bst2BI CACGAG 1 cut(s) 1377
Bst2UI CCWGG 4 cut(s) 1302, 1386, 1527, 1719
Bst4CI ACNGT 3 cut(s) 38, 742, 1193
Bst6I CTCTTC 6 cut(s) 336, 444, 584, 612, 1232, 1263
BstACI GRCGYC 1 cut(s) 9
BstAFI CTTAAG 1 cut(s) 734
BstAPI GCANNNNNTGC 1 cut(s) 965
BstBAI YACGTR 1 cut(s) 1496
BstC8I GCNNGC 3 cut(s) 43, 753, 970
BstDEI CTNAG 3 cut(s) 413, 888, 1049
BstDSI CCRYGG 3 cut(s) 16, 1064, 1153
BstEII GGTNACC 1 cut(s) 71
BstENI CCTNNNNNAGG 1 cut(s) 1495
BstF5I GGATG 6 cut(s) 12, 323, 601, 628, 1015, 1663
BstFNI CGCG 1 cut(s) 1266
BstMAI GTCTC 3 cut(s) 648, 735, 894
BstMWI GCNNNNNNNGC 2 cut(s) 519, 965
BstNI CCWGG 4 cut(s) 1302, 1386, 1527, 1719
BstNSI RCATGY 1 cut(s) 611
BstPI GGTNACC 1 cut(s) 71
BstSCI CCNGG 4 cut(s) 1300, 1384, 1525, 1717
BstSFI CTRYAG 3 cut(s) 171, 1192, 1638
BstUI CGCG 1 cut(s) 1266
BstV1I GCAGC 1 cut(s) 442
BstV2I GAAGAC 2 cut(s) 266, 1052
BstX2I RGATCY 4 cut(s) 175, 487, 1196, 1486
BstYI RGATCY 4 cut(s) 175, 487, 1196, 1486
BsuRI GGCC 3 cut(s) 314, 882, 1145
BtgI CCRYGG 3 cut(s) 16, 1064, 1153
BtsCI GGATG 6 cut(s) 12, 323, 601, 628, 1015, 1663
BtsI GCAGTG 2 cut(s) 520, 1681
BtsIMutI CAGTG 4 cut(s) 154, 520, 1120, 1681
BtuMI TCGCGA 1 cut(s) 1266
Cac8I GCNNGC 3 cut(s) 43, 753, 970
Cfr13I GGNCC 4 cut(s) 312, 686, 1397, 1511
CseI GACGC 2 cut(s) 17, 1592
Csp6I GTAC 2 cut(s) 377, 1042
CspCI CAANNNNNGTGG 2 cut(s) 1153, 1188
CviAII CATG 7 cut(s) 17, 25, 608, 748, 973, 1065, 1187
CviQI GTAC 2 cut(s) 377, 1042
DdeI CTNAG 3 cut(s) 413, 888, 1049
Eam1104I CTCTTC 6 cut(s) 336, 444, 584, 612, 1232, 1263
EarI CTCTTC 6 cut(s) 336, 444, 584, 612, 1232, 1263
Eco130I CCWWGG 3 cut(s) 16, 76, 1064
Eco147I AGGCCT 1 cut(s) 1145
Eco24I GRGCYC 1 cut(s) 1689
Eco32I GATATC 1 cut(s) 814
Eco47I GGWCC 3 cut(s) 686, 1397, 1511
Eco57I CTGAAG 2 cut(s) 213, 1256
Eco88I CYCGRG 1 cut(s) 1016
Eco91I GGTNACC 1 cut(s) 71
EcoNI CCTNNNNNAGG 1 cut(s) 1495
EcoO109I RGGNCCY 1 cut(s) 686
EcoO65I GGTNACC 1 cut(s) 71
EcoRI GAATTC 1 cut(s) 158
EcoRII CCWGG 4 cut(s) 1300, 1384, 1525, 1717
EcoRV GATATC 1 cut(s) 814
EcoT14I CCWWGG 3 cut(s) 16, 76, 1064
EcoT38I GRGCYC 1 cut(s) 1689
ErhI CCWWGG 3 cut(s) 16, 76, 1064
FaeI CATG 7 cut(s) 20, 28, 611, 751, 976, 1068, 1190
FaqI GGGAC 3 cut(s) 47, 699, 967
FatI CATG 7 cut(s) 16, 24, 607, 747, 972, 1064, 1186
Fnu4HI GCNGC 1 cut(s) 456
FokI GGATG 5 cut(s) 310, 608, 635, 1022, 1670
FriOI GRGCYC 1 cut(s) 1689
Fsp4HI GCNGC 1 cut(s) 456
FspBI CTAG 7 cut(s) 48, 77, 155, 690, 1602, 1647, 1727
GluI GCNGC 1 cut(s) 456
GsuI CTGGAG 1 cut(s) 1401
HaeIII GGCC 3 cut(s) 314, 882, 1145
HgaI GACGC 2 cut(s) 17, 1592
Hin1I GRCGYC 1 cut(s) 9
Hin1II CATG 7 cut(s) 20, 28, 611, 751, 976, 1068, 1190
HincII GTYRAC 3 cut(s) 561, 1131, 1617
HindII GTYRAC 3 cut(s) 561, 1131, 1617
HindIII AAGCTT 1 cut(s) 1531
HinfI GANTC 6 cut(s) 100, 402, 475, 533, 1019, 1679
HphI GGTGA 1 cut(s) 83
Hpy166II GTNNAC 4 cut(s) 61, 561, 1131, 1617
Hpy188I TCNGA 6 cut(s) 105, 164, 259, 861, 1236, 1684
Hpy8I GTNNAC 4 cut(s) 61, 561, 1131, 1617
Hpy99I CGWCG 1 cut(s) 852
HpyAV CCTTC 6 cut(s) 100, 188, 340, 644, 999, 1072
HpyCH4III ACNGT 3 cut(s) 38, 742, 1193
HpyCH4IV ACGT 1 cut(s) 1495
HpyF10VI GCNNNNNNNGC 2 cut(s) 519, 965
HpyF3I CTNAG 3 cut(s) 413, 888, 1049
HpySE526I ACGT 1 cut(s) 1495
Hsp92I GRCGYC 1 cut(s) 9
Hsp92II CATG 7 cut(s) 20, 28, 611, 751, 976, 1068, 1190
LmnI GCTCC 2 cut(s) 184, 1387
Lsp1109I GCAGC 1 cut(s) 442
LweI GCATC 4 cut(s) 30, 531, 588, 1648
MaeI CTAG 7 cut(s) 48, 77, 155, 690, 1602, 1647, 1727
MaeII ACGT 1 cut(s) 1495
MaeIII GTNAC 4 cut(s) 71, 539, 1020, 1250
MfeI CAATTG 1 cut(s) 1137
MflI RGATCY 4 cut(s) 175, 487, 1196, 1486
MhlI GDGCHC 2 cut(s) 1384, 1689
MluCI AATT 8 cut(s) 158, 435, 626, 943, 1137, 1169, 1504, 1665
MlyI GAGTC 1 cut(s) 1028
MseI TTAA 2 cut(s) 735, 1277
MslI CAYNNNNRTG 1 cut(s) 612
MspCI CTTAAG 1 cut(s) 734
MspR9I CCNGG 4 cut(s) 1302, 1386, 1527, 1719
MunI CAATTG 1 cut(s) 1137
MvaI CCWGG 4 cut(s) 1302, 1386, 1527, 1719
MvnI CGCG 1 cut(s) 1266
MwoI GCNNNNNNNGC 2 cut(s) 519, 965
NcoI CCATGG 2 cut(s) 16, 1064
NlaIII CATG 7 cut(s) 20, 28, 611, 751, 976, 1068, 1190
NlaIV GGNNCC 2 cut(s) 313, 687
NmuCI GTSAC 3 cut(s) 71, 1020, 1250
NruI TCGCGA 1 cut(s) 1266
NspI RCATGY 1 cut(s) 611
PaeR7I CTCGAG 1 cut(s) 1016
PceI AGGCCT 1 cut(s) 1145
PciI ACATGT 1 cut(s) 607
PfeI GAWTC 5 cut(s) 100, 402, 475, 533, 1679
PflFI GACNNNGTC 1 cut(s) 690
PflMI CCANNNNNTGG 1 cut(s) 1406
PfoI TCCNGGA 2 cut(s) 1525, 1717
PkrI GCNGC 1 cut(s) 457
PleI GAGTC 1 cut(s) 1027
PpsI GAGTC 1 cut(s) 1027
Ppu21I YACGTR 1 cut(s) 1496
PpuMI RGGWCCY 1 cut(s) 686
PscI ACATGT 1 cut(s) 607
Psp5II RGGWCCY 1 cut(s) 686
Psp6I CCWGG 4 cut(s) 1300, 1384, 1525, 1717
PspEI GGTNACC 1 cut(s) 71
PspGI CCWGG 4 cut(s) 1300, 1384, 1525, 1717
PspN4I GGNNCC 2 cut(s) 313, 687
PspPI GGNCC 4 cut(s) 312, 686, 1397, 1511
PspPPI RGGWCCY 1 cut(s) 686
PstI CTGCAG 1 cut(s) 175
PsuI RGATCY 4 cut(s) 175, 487, 1196, 1486
PsyI GACNNNGTC 1 cut(s) 690
RruI TCGCGA 1 cut(s) 1266
RsaI GTAC 2 cut(s) 378, 1043
RsaNI GTAC 2 cut(s) 377, 1042
RseI CAYNNNNRTG 1 cut(s) 612
SaqAI TTAA 2 cut(s) 735, 1277
SatI GCNGC 1 cut(s) 456
Sau96I GGNCC 4 cut(s) 312, 686, 1397, 1511
ScaI AGTACT 1 cut(s) 378
SchI GAGTC 1 cut(s) 1028
ScrFI CCNGG 4 cut(s) 1302, 1386, 1527, 1719
SduI GDGCHC 2 cut(s) 1384, 1689
SfaNI GCATC 4 cut(s) 30, 531, 588, 1648
SfcI CTRYAG 3 cut(s) 171, 1192, 1638
Sfr274I CTCGAG 1 cut(s) 1016
SinI GGWCC 3 cut(s) 686, 1397, 1511
SlaI CTCGAG 1 cut(s) 1016
SmiMI CAYNNNNRTG 1 cut(s) 612
SmlI CTYRAG 3 cut(s) 695, 734, 1016
SmoI CTYRAG 3 cut(s) 695, 734, 1016
Sse9I AATT 8 cut(s) 158, 435, 626, 943, 1137, 1169, 1504, 1665
SseBI AGGCCT 1 cut(s) 1145
SsiI CCGC 1 cut(s) 1612
SspMI CTAG 7 cut(s) 48, 77, 155, 690, 1602, 1647, 1727
StuI AGGCCT 1 cut(s) 1145
StyD4I CCNGG 4 cut(s) 1300, 1384, 1525, 1717
StyI CCWWGG 3 cut(s) 16, 76, 1064
TaaI ACNGT 3 cut(s) 38, 742, 1193
TaiI ACGT 1 cut(s) 1498
TaqI TCGA 5 cut(s) 119, 460, 471, 772, 1017
TaqII GACCGA 1 cut(s) 1528
TasI AATT 8 cut(s) 158, 435, 626, 943, 1137, 1169, 1504, 1665
TatI WGTACW 2 cut(s) 376, 1041
TfiI GAWTC 5 cut(s) 100, 402, 475, 533, 1679
Tru1I TTAA 2 cut(s) 735, 1277
Tru9I TTAA 2 cut(s) 735, 1277
TscAI CASTG 4 cut(s) 154, 520, 1120, 1681
TseFI GTSAC 3 cut(s) 71, 1020, 1250
TseI GCWGC 1 cut(s) 455
Tsp45I GTSAC 3 cut(s) 71, 1020, 1250
TspDTI ATGAA 6 cut(s) 102, 612, 630, 639, 776, 989
TspGWI ACGGA 1 cut(s) 78
TspRI CASTG 4 cut(s) 154, 520, 1120, 1681
Tth111I GACNNNGTC 1 cut(s) 690
Van91I CCANNNNNTGG 1 cut(s) 1406
Vha464I CTTAAG 1 cut(s) 734
VpaK11BI GGWCC 3 cut(s) 686, 1397, 1511
XagI CCTNNNNNAGG 1 cut(s) 1495
XapI RAATTY 6 cut(s) 158, 435, 626, 943, 1169, 1504
XceI RCATGY 1 cut(s) 611
XcmI CCANNNNNNNNNTGG 1 cut(s) 49
XhoI CTCGAG 1 cut(s) 1016
XmaJI CCTAGG 1 cut(s) 76
XspI CTAG 7 cut(s) 48, 77, 155, 690, 1602, 1647, 1727
ZrmI AGTACT 1 cut(s) 378
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.