RchiOBHm_Chr2g0144271
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
61885989 .. 61890025
4037 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51423

Sequence Viewer

Length: 1446 bp
ATGACATGGGGTTGCTATATTTTCTTCTTGCTGGTTTGTGCTTCTCTTTCTCAGGAAAATGTCAAGACAAAGCATCCACAGTTGCTGTATGAGTCGAAGTTGTATAAAATACTACAGGGAGGAACTGGAATTCCAAATGTGCGATGGTTTGGCACTGAAGGAGACTACAATGTTCTTGTGATGGATTTATTGGGACCTAGTCTTGAGGATTTATTCAACTTTTGCAGTAGGAAGTTGTCTCTTAAGACTGTTCTCATGCTTGCAGATCAAATGATAAATCGAGTGGAGTTTGTTCATTCCAAGTCTTTTCTACATCGGGATATCAAACCAGACAAGTTCCTAATGGGATTGGGTCGTCGGGCAAATCAGATTTACATCATTGACTTCGGCCTCGCTAAGAAGTATAGAGACACATCAACCCATCAGCATATTCCTTATAGAGATAATAAGAATTTGACTGGGACAGCAAGATATGCAAGCATGAATACTCATCTTGGCATTGAACAAAGCCGAAGGGATGATCTCGAGTCACTTGGATATGTGCTTATGTACTTCCTAAGAGGAAGTCTTCCATGGCAGGGATTGAAGGCTGGAACTAAAAAGCAGAAGTATGAGAAGATCAGTGAAAAGAAAGTGTCAACATCAATTGAGGCCTTATGCCGTGGTTATCCCACCGAATTTGCCTCATACTTCCATTACTGTAGATCTCTACGTTTTGATGATAAACCAGATTATGCTTATCTGAAGAGATTGTTTCGTGACCTTTTTATTTGCGAAGGTTTTCAGTTTGATTATGTCTTTGATTGGACGATCTTGAAATATCAGCAGTCGCAGATTGCCACACCTCCTACTCGTGCTCCTGGTGGTGCTGGACCAAGCTCTGGACTGCCTCCAGTTGCAAATGTTGAAAGACAATCAGGTGGGGAGGAAGTTAGACCTACTGGTTGGTCGTTGGCAGATCCCTCACGTAGGAGAAATTCTGGACCGATTGTAAATCCTGGAAGCTTGTCTAAACAAAAAAGTCCTGTTGCAAATGATCCATCTGTGTCTAAAGACGCAATGTTATCAAGTTCTAGTTTTTTGCGGTCAACTGGATCATCAAGGAGGGCTGTAGTTTCTAGCAGTCGGGATGCAGTAATTGTTGGCAGTGAATCCGAGCCCTCTCGCCCTCAAACCACAGAGGCAAGTCCTGGAACACTAGGTAAAATTTCTTCTGTCCAAAGAAGTTCACCAGTTGTATCTTCAGAGCAGAATCGTACCACTTCTGGTAGAAATATTTCGACCGTAAAAAACTTAAGTCCACCCTCAGAGGTATTGAGACCCTTCATTTTAATAGCGACGAGAGAGTACAGTATTAGCAGTCGCTTCTCTCAATATGTCGCCCACTGTAAATTTGAAAAACGGTATACAGTTCTCACACACTTCGGGTGGAATTTGTTTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

481

Amino Acids

54.21

Weight (kDa)

9.6

Isoelectric Point (pI)

54.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 20 - 206 4.9e-17 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 50 - 212 1.4e-07 Protein tyrosine and serine/threonine kinase
Pkinase_fungal PF17667 89 - 185 8.1e-07 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 881
AccI GTMKAC 1 cut(s) 1406
AciI CCGC 1 cut(s) 1084
AclWI GGATC 3 cut(s) 953, 1031, 1102
AcsI RAATTY 7 cut(s) 129, 451, 677, 976, 1206, 1391, 1432
AcuI CTGAAG 3 cut(s) 177, 764, 1227
AfaI GTAC 3 cut(s) 551, 1258, 1349
AfiI CCNNNNNNNGG 3 cut(s) 578, 881, 969
AflII CTTAAG 2 cut(s) 242, 1294
AgsI TTSAA 6 cut(s) 217, 503, 586, 817, 908, 1397
AjnI CCWGG 3 cut(s) 859, 997, 1189
AloI GAACNNNNNNTCC 2 cut(s) 115, 147
AluBI AGCT 2 cut(s) 879, 1005
AluI AGCT 2 cut(s) 879, 1005
Alw21I GWGCWC 1 cut(s) 859
Alw26I GTCTC 4 cut(s) 156, 243, 402, 1312
AlwI GGATC 3 cut(s) 953, 1031, 1102
AlwNI CAGNNNCTG 1 cut(s) 85
Ama87I CYCGRG 1 cut(s) 524
AoxI GGCC 2 cut(s) 388, 651
ApoI RAATTY 7 cut(s) 129, 451, 677, 976, 1206, 1391, 1432
Asp700I GAANNNNTTC 2 cut(s) 780, 1276
AspS9I GGNCC 3 cut(s) 194, 872, 983
AsuHPI GGTGA 1 cut(s) 1221
AvaI CYCGRG 1 cut(s) 524
AvaII GGWCC 3 cut(s) 194, 872, 983
BanII GRGCYC 1 cut(s) 1161
BarI GAAGNNNNNNTAC 2 cut(s) 1195, 1227
BauI CACGAG 1 cut(s) 852
BbsI GAAGAC 1 cut(s) 560
Bbv12I GWGCWC 1 cut(s) 859
BccI CCATC 4 cut(s) 138, 175, 429, 1048
BceAI ACGGC 1 cut(s) 645
BciT130I CCWGG 3 cut(s) 861, 999, 1191
BcoDI GTCTC 4 cut(s) 156, 243, 402, 1312
BfaI CTAG 4 cut(s) 198, 1074, 1119, 1199
BfmI CTRYAG 3 cut(s) 113, 700, 1110
BfrI CTTAAG 2 cut(s) 242, 1294
BglII AGATCT 1 cut(s) 704
Bme1390I CCNGG 3 cut(s) 861, 999, 1191
Bme18I GGWCC 3 cut(s) 194, 872, 983
BmeT110I CYCGRG 1 cut(s) 524
BmgT120I GGNCC 3 cut(s) 194, 872, 983
BmiI GGNNCC 1 cut(s) 195
BmrFI CCNGG 3 cut(s) 861, 999, 1191
BmrI ACTGGG 1 cut(s) 468
BmsI GCATC 2 cut(s) 82, 1120
BmuI ACTGGG 1 cut(s) 468
BpiI GAAGAC 1 cut(s) 560
BpmI CTGGAG 1 cut(s) 876
BpuEI CTTGAG 1 cut(s) 224
BsaAI YACGTR 1 cut(s) 968
BsaBI GATNNNNATC 1 cut(s) 374
BsaI GGTCTC 1 cut(s) 1312
BsaJI CCNNGG 2 cut(s) 572, 661
BsaXI ACNNNNNCTCC 2 cut(s) 841, 871
Bsc4I CCNNNNNNNGG 3 cut(s) 578, 881, 969
Bse1I ACTGG 6 cut(s) 130, 463, 893, 946, 1096, 1232
Bse3DI GCAATG 1 cut(s) 1065
Bse8I GATNNNNATC 1 cut(s) 374
BseBI CCWGG 3 cut(s) 861, 999, 1191
BseDI CCNNGG 2 cut(s) 572, 661
BseGI GGATG 3 cut(s) 73, 523, 1135
BseJI GATNNNNATC 1 cut(s) 374
BseLI CCNNNNNNNGG 3 cut(s) 578, 881, 969
BseMI GCAATG 1 cut(s) 1065
BseMII CTCAG 2 cut(s) 65, 1320
BseNI ACTGG 6 cut(s) 130, 463, 893, 946, 1096, 1232
Bsh1285I CGRYCG 1 cut(s) 1284
BshFI GGCC 2 cut(s) 390, 653
BsiEI CGRYCG 1 cut(s) 1284
BsiHKAI GWGCWC 1 cut(s) 859
BsiHKCI CYCGRG 1 cut(s) 524
BslFI GGGAC 2 cut(s) 207, 475
BslI CCNNNNNNNGG 3 cut(s) 578, 881, 969
BsmAI GTCTC 4 cut(s) 156, 243, 402, 1312
BsmFI GGGAC 2 cut(s) 207, 475
BsnI GGCC 2 cut(s) 390, 653
Bso31I GGTCTC 1 cut(s) 1312
BsoBI CYCGRG 1 cut(s) 524
Bsp1286I GDGCHC 2 cut(s) 859, 1161
Bsp143I GATC 8 cut(s) 265, 520, 618, 704, 810, 958, 1036, 1094
Bsp19I CCATGG 1 cut(s) 572
BspACI CCGC 1 cut(s) 1084
BspANI GGCC 2 cut(s) 390, 653
BspCNI CTCAG 2 cut(s) 64, 1319
BspLI GGNNCC 1 cut(s) 195
BspPI GGATC 3 cut(s) 953, 1031, 1102
BspTI CTTAAG 2 cut(s) 242, 1294
BspTNI GGTCTC 1 cut(s) 1312
BsrDI GCAATG 1 cut(s) 1065
BsrI ACTGG 6 cut(s) 130, 463, 893, 946, 1096, 1232
BssECI CCNNGG 2 cut(s) 572, 661
BssMI GATC 8 cut(s) 265, 520, 618, 704, 810, 958, 1036, 1094
BssNAI GTATAC 1 cut(s) 1407
BssSI CACGAG 1 cut(s) 852
BssT1I CCWWGG 1 cut(s) 572
Bst1107I GTATAC 1 cut(s) 1407
Bst2BI CACGAG 1 cut(s) 852
Bst2UI CCWGG 3 cut(s) 861, 999, 1191
Bst4CI ACNGT 8 cut(s) 81, 250, 701, 1285, 1352, 1388, 1404, 1411
Bst6I CTCTTC 1 cut(s) 740
BstAFI CTTAAG 2 cut(s) 242, 1294
BstAPI GCANNNNNTGC 1 cut(s) 473
BstBAI YACGTR 1 cut(s) 968
BstC8I GCNNGC 2 cut(s) 261, 478
BstDEI CTNAG 4 cut(s) 51, 396, 557, 1306
BstDSI CCRYGG 2 cut(s) 572, 661
BstENI CCTNNNNNAGG 1 cut(s) 967
BstF5I GGATG 3 cut(s) 73, 523, 1135
BstKTI GATC 8 cut(s) 268, 523, 621, 707, 813, 961, 1039, 1097
BstMAI GTCTC 4 cut(s) 156, 243, 402, 1312
BstMBI GATC 8 cut(s) 265, 520, 618, 704, 810, 958, 1036, 1094
BstMCI CGRYCG 1 cut(s) 1284
BstMWI GCNNNNNNNGC 1 cut(s) 473
BstNI CCWGG 3 cut(s) 861, 999, 1191
BstSCI CCNGG 3 cut(s) 859, 997, 1189
BstSFI CTRYAG 3 cut(s) 113, 700, 1110
BstV2I GAAGAC 1 cut(s) 560
BstX2I RGATCY 2 cut(s) 704, 958
BstYI RGATCY 2 cut(s) 704, 958
BstZ17I GTATAC 1 cut(s) 1407
BsuRI GGCC 2 cut(s) 390, 653
BtgI CCRYGG 2 cut(s) 572, 661
BtgZI GCGATG 1 cut(s) 157
BtsCI GGATG 3 cut(s) 73, 523, 1135
BtsI GCAGTG 1 cut(s) 1153
BtsIMutI CAGTG 4 cut(s) 153, 628, 1153, 1384
Cac8I GCNNGC 2 cut(s) 261, 478
CaiI CAGNNNCTG 1 cut(s) 85
Cfr13I GGNCC 3 cut(s) 194, 872, 983
CseI GACGC 1 cut(s) 1064
Csp6I GTAC 3 cut(s) 550, 1257, 1348
CspCI CAANNNNNGTGG 2 cut(s) 661, 696
CviAII CATG 4 cut(s) 6, 256, 481, 573
CviJI RGCY 8 cut(s) 390, 510, 590, 653, 879, 1005, 1109, 1159
CviKI_1 RGCY 8 cut(s) 390, 510, 590, 653, 879, 1005, 1109, 1159
CviQI GTAC 3 cut(s) 550, 1257, 1348
DdeI CTNAG 4 cut(s) 51, 396, 557, 1306
DpnI GATC 8 cut(s) 267, 522, 620, 706, 812, 960, 1038, 1096
DpnII GATC 8 cut(s) 265, 520, 618, 704, 810, 958, 1036, 1094
Eam1104I CTCTTC 1 cut(s) 740
EarI CTCTTC 1 cut(s) 740
Eco130I CCWWGG 1 cut(s) 572
Eco147I AGGCCT 1 cut(s) 653
Eco24I GRGCYC 1 cut(s) 1161
Eco31I GGTCTC 1 cut(s) 1312
Eco32I GATATC 1 cut(s) 322
Eco47I GGWCC 3 cut(s) 194, 872, 983
Eco57I CTGAAG 3 cut(s) 177, 764, 1227
Eco88I CYCGRG 1 cut(s) 524
EcoNI CCTNNNNNAGG 1 cut(s) 967
EcoO109I RGGNCCY 1 cut(s) 194
EcoRI GAATTC 1 cut(s) 129
EcoRII CCWGG 3 cut(s) 859, 997, 1189
EcoRV GATATC 1 cut(s) 322
EcoT14I CCWWGG 1 cut(s) 572
EcoT38I GRGCYC 1 cut(s) 1161
ErhI CCWWGG 1 cut(s) 572
FaeI CATG 4 cut(s) 9, 259, 484, 576
FaqI GGGAC 2 cut(s) 207, 475
FatI CATG 4 cut(s) 5, 255, 480, 572
FblI GTMKAC 1 cut(s) 1406
FokI GGATG 3 cut(s) 60, 530, 1142
FriOI GRGCYC 1 cut(s) 1161
FspBI CTAG 4 cut(s) 198, 1074, 1119, 1199
GsuI CTGGAG 1 cut(s) 876
HaeIII GGCC 2 cut(s) 390, 653
HgaI GACGC 1 cut(s) 1064
Hin1II CATG 4 cut(s) 9, 259, 484, 576
HincII GTYRAC 2 cut(s) 639, 1089
HindII GTYRAC 2 cut(s) 639, 1089
HindIII AAGCTT 1 cut(s) 1003
HinfI GANTC 4 cut(s) 92, 527, 1151, 1252
HphI GGTGA 1 cut(s) 1221
Hpy166II GTNNAC 5 cut(s) 639, 1089, 1229, 1301, 1407
Hpy188I TCNGA 5 cut(s) 369, 744, 1156, 1246, 1309
Hpy8I GTNNAC 5 cut(s) 639, 1089, 1229, 1301, 1407
Hpy99I CGWCG 2 cut(s) 360, 1342
HpyAV CCTTC 5 cut(s) 152, 507, 580, 770, 1333
HpyCH4III ACNGT 8 cut(s) 81, 250, 701, 1285, 1352, 1388, 1404, 1411
HpyCH4IV ACGT 2 cut(s) 712, 967
HpyCH4V TGCA 6 cut(s) 225, 263, 476, 899, 1031, 1133
HpyF10VI GCNNNNNNNGC 1 cut(s) 473
HpyF3I CTNAG 4 cut(s) 51, 396, 557, 1306
HpySE526I ACGT 2 cut(s) 712, 967
Hsp92II CATG 4 cut(s) 9, 259, 484, 576
Kzo9I GATC 8 cut(s) 265, 520, 618, 704, 810, 958, 1036, 1094
LmnI GCTCC 1 cut(s) 862
LweI GCATC 2 cut(s) 82, 1120
MaeI CTAG 4 cut(s) 198, 1074, 1119, 1199
MaeII ACGT 2 cut(s) 712, 967
MaeIII GTNAC 2 cut(s) 528, 758
MalI GATC 8 cut(s) 267, 522, 620, 706, 812, 960, 1038, 1096
MboI GATC 8 cut(s) 265, 520, 618, 704, 810, 958, 1036, 1094
MboII GAAGA 6 cut(s) 16, 560, 628, 757, 1203, 1233
MfeI CAATTG 1 cut(s) 645
MflI RGATCY 2 cut(s) 704, 958
MhlI GDGCHC 2 cut(s) 859, 1161
MluCI AATT 9 cut(s) 129, 451, 645, 677, 976, 1137, 1206, 1391, 1432
MlyI GAGTC 2 cut(s) 101, 536
MroXI GAANNNNTTC 2 cut(s) 780, 1276
MseI TTAA 4 cut(s) 243, 1295, 1331, 1444
MspCI CTTAAG 2 cut(s) 242, 1294
MspR9I CCNGG 3 cut(s) 861, 999, 1191
MunI CAATTG 1 cut(s) 645
MvaI CCWGG 3 cut(s) 861, 999, 1191
MwoI GCNNNNNNNGC 1 cut(s) 473
NcoI CCATGG 1 cut(s) 572
NdeII GATC 8 cut(s) 265, 520, 618, 704, 810, 958, 1036, 1094
NlaIII CATG 4 cut(s) 9, 259, 484, 576
NlaIV GGNNCC 1 cut(s) 195
NmuCI GTSAC 2 cut(s) 528, 758
PaeR7I CTCGAG 1 cut(s) 524
PceI AGGCCT 1 cut(s) 653
PdmI GAANNNNTTC 2 cut(s) 780, 1276
PfeI GAWTC 2 cut(s) 1151, 1252
PflFI GACNNNGTC 1 cut(s) 198
PflMI CCANNNNNTGG 1 cut(s) 881
PfoI TCCNGGA 2 cut(s) 997, 1189
PleI GAGTC 2 cut(s) 100, 535
PpsI GAGTC 2 cut(s) 100, 535
Ppu21I YACGTR 1 cut(s) 968
PpuMI RGGWCCY 1 cut(s) 194
Psp5II RGGWCCY 1 cut(s) 194
Psp6I CCWGG 3 cut(s) 859, 997, 1189
PspGI CCWGG 3 cut(s) 859, 997, 1189
PspN4I GGNNCC 1 cut(s) 195
PspPI GGNCC 3 cut(s) 194, 872, 983
PspPPI RGGWCCY 1 cut(s) 194
PstNI CAGNNNCTG 1 cut(s) 85
PsuI RGATCY 2 cut(s) 704, 958
PsyI GACNNNGTC 1 cut(s) 198
RsaI GTAC 3 cut(s) 551, 1258, 1349
RsaNI GTAC 3 cut(s) 550, 1257, 1348
SaqAI TTAA 4 cut(s) 243, 1295, 1331, 1444
Sau3AI GATC 8 cut(s) 265, 520, 618, 704, 810, 958, 1036, 1094
Sau96I GGNCC 3 cut(s) 194, 872, 983
SchI GAGTC 2 cut(s) 101, 536
ScrFI CCNGG 3 cut(s) 861, 999, 1191
SduI GDGCHC 2 cut(s) 859, 1161
SfaNI GCATC 2 cut(s) 82, 1120
SfcI CTRYAG 3 cut(s) 113, 700, 1110
Sfr274I CTCGAG 1 cut(s) 524
SinI GGWCC 3 cut(s) 194, 872, 983
SlaI CTCGAG 1 cut(s) 524
SmlI CTYRAG 4 cut(s) 203, 242, 524, 1294
SmoI CTYRAG 4 cut(s) 203, 242, 524, 1294
Sse9I AATT 9 cut(s) 129, 451, 645, 677, 976, 1137, 1206, 1391, 1432
SseBI AGGCCT 1 cut(s) 653
SsiI CCGC 1 cut(s) 1084
SspI AATATT 1 cut(s) 1276
SspMI CTAG 4 cut(s) 198, 1074, 1119, 1199
StuI AGGCCT 1 cut(s) 653
StyD4I CCNGG 3 cut(s) 859, 997, 1189
StyI CCWWGG 1 cut(s) 572
TaaI ACNGT 8 cut(s) 81, 250, 701, 1285, 1352, 1388, 1404, 1411
TaiI ACGT 2 cut(s) 715, 970
TaqI TCGA 4 cut(s) 95, 280, 525, 1280
TaqII GACCGA 1 cut(s) 1000
TasI AATT 9 cut(s) 129, 451, 645, 677, 976, 1137, 1206, 1391, 1432
TatI WGTACW 2 cut(s) 549, 1347
TfiI GAWTC 2 cut(s) 1151, 1252
Tru1I TTAA 4 cut(s) 243, 1295, 1331, 1444
Tru9I TTAA 4 cut(s) 243, 1295, 1331, 1444
TscAI CASTG 4 cut(s) 160, 628, 1153, 1391
TseFI GTSAC 2 cut(s) 528, 758
Tsp45I GTSAC 2 cut(s) 528, 758
TspDTI ATGAA 3 cut(s) 284, 497, 1315
TspRI CASTG 4 cut(s) 160, 628, 1153, 1391
Tth111I GACNNNGTC 1 cut(s) 198
Van91I CCANNNNNTGG 1 cut(s) 881
Vha464I CTTAAG 2 cut(s) 242, 1294
VpaK11BI GGWCC 3 cut(s) 194, 872, 983
XagI CCTNNNNNAGG 1 cut(s) 967
XapI RAATTY 7 cut(s) 129, 451, 677, 976, 1206, 1391, 1432
XcmI CCANNNNNNNNNTGG 1 cut(s) 141
XhoI CTCGAG 1 cut(s) 524
XmiI GTMKAC 1 cut(s) 1406
XmnI GAANNNNTTC 2 cut(s) 780, 1276
XspI CTAG 4 cut(s) 198, 1074, 1119, 1199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.