Transporter
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Nramp | PF01566 | 66 - 427 | 9.4e-120 | Natural resistance-associated macrophage protein-like |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 783 |
| AccII | CGCG | 1 cut(s) | 998 |
| AccIII | TCCGGA | 1 cut(s) | 1473 |
| AciI | CCGC | 7 cut(s) | 5, 48, 269, 713, 768, 867, 1452 |
| AclI | AACGTT | 1 cut(s) | 960 |
| AclWI | GGATC | 4 cut(s) | 22, 179, 254, 479 |
| AcsI | RAATTY | 3 cut(s) | 133, 1241, 1416 |
| AcuI | CTGAAG | 1 cut(s) | 921 |
| AfaI | GTAC | 2 cut(s) | 350, 499 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 620, 733 |
| AflII | CTTAAG | 2 cut(s) | 493, 892 |
| AflIII | ACRYGT | 1 cut(s) | 1273 |
| AgeI | ACCGGT | 1 cut(s) | 463 |
| AgsI | TTSAA | 4 cut(s) | 171, 284, 521, 1509 |
| AjnI | CCWGG | 3 cut(s) | 154, 187, 619 |
| Alw21I | GWGCWC | 4 cut(s) | 223, 980, 1022, 1215 |
| Alw26I | GTCTC | 8 cut(s) | 30, 115, 194, 644, 683, 853, 1506, 1523 |
| AlwI | GGATC | 4 cut(s) | 22, 179, 254, 479 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 17 |
| Ama87I | CYCGRG | 3 cut(s) | 748, 1082, 1129 |
| Aor13HI | TCCGGA | 1 cut(s) | 1473 |
| AoxI | GGCC | 4 cut(s) | 151, 258, 735, 831 |
| ApeKI | GCWGC | 1 cut(s) | 293 |
| ApoI | RAATTY | 3 cut(s) | 133, 1241, 1416 |
| AsiGI | ACCGGT | 1 cut(s) | 463 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 134 |
| AspLEI | GCGC | 1 cut(s) | 1000 |
| AspS9I | GGNCC | 1 cut(s) | 152 |
| AsuHPI | GGTGA | 2 cut(s) | 289, 544 |
| AvaI | CYCGRG | 3 cut(s) | 748, 1082, 1129 |
| BanII | GRGCYC | 3 cut(s) | 980, 1022, 1215 |
| BbsI | GAAGAC | 2 cut(s) | 1399, 1462 |
| Bbv12I | GWGCWC | 4 cut(s) | 223, 980, 1022, 1215 |
| BbvI | GCAGC | 1 cut(s) | 280 |
| BccI | CCATC | 1 cut(s) | 1258 |
| BciT130I | CCWGG | 3 cut(s) | 156, 189, 621 |
| BcoDI | GTCTC | 8 cut(s) | 30, 115, 194, 644, 683, 853, 1506, 1523 |
| BfaI | CTAG | 1 cut(s) | 1349 |
| BfmI | CTRYAG | 1 cut(s) | 9 |
| BfrI | CTTAAG | 2 cut(s) | 493, 892 |
| BfuAI | ACCTGC | 1 cut(s) | 783 |
| BisI | GCNGC | 5 cut(s) | 6, 270, 294, 713, 1452 |
| BlpI | GCTNAGC | 1 cut(s) | 330 |
| BlsI | GCNGC | 5 cut(s) | 7, 271, 295, 714, 1453 |
| BmcAI | AGTACT | 1 cut(s) | 350 |
| Bme1390I | CCNGG | 3 cut(s) | 156, 189, 621 |
| BmeT110I | CYCGRG | 3 cut(s) | 748, 1082, 1129 |
| BmgT120I | GGNCC | 1 cut(s) | 152 |
| BmiI | GGNNCC | 2 cut(s) | 700, 1230 |
| BmrFI | CCNGG | 3 cut(s) | 156, 189, 621 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1307 |
| BpiI | GAAGAC | 2 cut(s) | 1399, 1462 |
| BpmI | CTGGAG | 3 cut(s) | 237, 563, 1185 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 330 |
| BsaBI | GATNNNNATC | 1 cut(s) | 96 |
| BsaI | GGTCTC | 3 cut(s) | 30, 644, 683 |
| BsaJI | CCNNGG | 5 cut(s) | 154, 619, 702, 738, 1088 |
| BsaWI | WCCGGW | 4 cut(s) | 415, 463, 1031, 1473 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 690, 720 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 620, 733 |
| Bse118I | RCCGGY | 1 cut(s) | 463 |
| Bse1I | ACTGG | 2 cut(s) | 39, 679 |
| Bse3DI | GCAATG | 3 cut(s) | 341, 1185, 1434 |
| Bse8I | GATNNNNATC | 1 cut(s) | 96 |
| BseAI | TCCGGA | 1 cut(s) | 1473 |
| BseBI | CCWGG | 3 cut(s) | 156, 189, 621 |
| BseDI | CCNNGG | 5 cut(s) | 154, 619, 702, 738, 1088 |
| BseJI | GATNNNNATC | 1 cut(s) | 96 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 620, 733 |
| BseMI | GCAATG | 3 cut(s) | 341, 1185, 1434 |
| BseMII | CTCAG | 4 cut(s) | 105, 321, 1090, 1108 |
| BseNI | ACTGG | 2 cut(s) | 39, 679 |
| BseXI | GCAGC | 1 cut(s) | 280 |
| Bsh1236I | CGCG | 1 cut(s) | 998 |
| BshFI | GGCC | 4 cut(s) | 153, 260, 737, 833 |
| BshTI | ACCGGT | 1 cut(s) | 463 |
| BsiHKAI | GWGCWC | 4 cut(s) | 223, 980, 1022, 1215 |
| BsiHKCI | CYCGRG | 3 cut(s) | 748, 1082, 1129 |
| BsiSI | CCGG | 5 cut(s) | 45, 416, 464, 1032, 1474 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 620, 733 |
| BsmAI | GTCTC | 8 cut(s) | 30, 115, 194, 644, 683, 853, 1506, 1523 |
| BsmBI | CGTCTC | 1 cut(s) | 853 |
| BsnI | GGCC | 4 cut(s) | 153, 260, 737, 833 |
| Bso31I | GGTCTC | 3 cut(s) | 30, 644, 683 |
| BsoBI | CYCGRG | 3 cut(s) | 748, 1082, 1129 |
| Bsp1286I | GDGCHC | 4 cut(s) | 223, 980, 1022, 1215 |
| Bsp13I | TCCGGA | 1 cut(s) | 1473 |
| Bsp143I | GATC | 8 cut(s) | 14, 184, 205, 246, 471, 904, 1072, 1197 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 330 |
| Bsp19I | CCATGG | 2 cut(s) | 702, 1088 |
| BspACI | CCGC | 7 cut(s) | 5, 48, 269, 713, 768, 867, 1452 |
| BspANI | GGCC | 4 cut(s) | 153, 260, 737, 833 |
| BspCNI | CTCAG | 4 cut(s) | 106, 322, 1089, 1107 |
| BspEI | TCCGGA | 1 cut(s) | 1473 |
| BspFNI | CGCG | 1 cut(s) | 998 |
| BspLI | GGNNCC | 2 cut(s) | 700, 1230 |
| BspMI | ACCTGC | 1 cut(s) | 783 |
| BspPI | GGATC | 4 cut(s) | 22, 179, 254, 479 |
| BspQI | GCTCTTC | 1 cut(s) | 116 |
| BspTI | CTTAAG | 2 cut(s) | 493, 892 |
| BspTNI | GGTCTC | 3 cut(s) | 30, 644, 683 |
| BsrDI | GCAATG | 3 cut(s) | 341, 1185, 1434 |
| BsrFI | RCCGGY | 1 cut(s) | 463 |
| BsrI | ACTGG | 2 cut(s) | 39, 679 |
| BssAI | RCCGGY | 1 cut(s) | 463 |
| BssECI | CCNNGG | 5 cut(s) | 154, 619, 702, 738, 1088 |
| BssMI | GATC | 8 cut(s) | 14, 184, 205, 246, 471, 904, 1072, 1197 |
| BssT1I | CCWWGG | 3 cut(s) | 702, 738, 1088 |
| Bst2UI | CCWGG | 3 cut(s) | 156, 189, 621 |
| Bst4CI | ACNGT | 2 cut(s) | 24, 1382 |
| Bst6I | CTCTTC | 4 cut(s) | 116, 728, 1239, 1503 |
| BstAFI | CTTAAG | 2 cut(s) | 493, 892 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 401, 1436 |
| BstC8I | GCNNGC | 3 cut(s) | 213, 790, 1432 |
| BstDEI | CTNAG | 5 cut(s) | 114, 148, 330, 1076, 1094 |
| BstDSI | CCRYGG | 2 cut(s) | 702, 1088 |
| BstEII | GGTNACC | 1 cut(s) | 50 |
| BstFNI | CGCG | 1 cut(s) | 998 |
| BstHHI | GCGC | 1 cut(s) | 1000 |
| BstKTI | GATC | 8 cut(s) | 17, 187, 208, 249, 474, 907, 1075, 1200 |
| BstMAI | GTCTC | 8 cut(s) | 30, 115, 194, 644, 683, 853, 1506, 1523 |
| BstMBI | GATC | 8 cut(s) | 14, 184, 205, 246, 471, 904, 1072, 1197 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 266, 392, 401, 1004, 1295, 1436, 1457 |
| BstNI | CCWGG | 3 cut(s) | 156, 189, 621 |
| BstNSI | RCATGY | 3 cut(s) | 451, 1277, 1561 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1307 |
| BstPI | GGTNACC | 1 cut(s) | 50 |
| BstSCI | CCNGG | 3 cut(s) | 154, 187, 619 |
| BstSFI | CTRYAG | 1 cut(s) | 9 |
| BstUI | CGCG | 1 cut(s) | 998 |
| BstV1I | GCAGC | 1 cut(s) | 280 |
| BstV2I | GAAGAC | 2 cut(s) | 1399, 1462 |
| BstX2I | RGATCY | 1 cut(s) | 14 |
| BstYI | RGATCY | 1 cut(s) | 14 |
| BsuRI | GGCC | 4 cut(s) | 153, 260, 737, 833 |
| BtgI | CCRYGG | 2 cut(s) | 702, 1088 |
| BveI | ACCTGC | 1 cut(s) | 783 |
| Cac8I | GCNNGC | 3 cut(s) | 213, 790, 1432 |
| CaiI | CAGNNNCTG | 1 cut(s) | 17 |
| CfoI | GCGC | 1 cut(s) | 1000 |
| Cfr10I | RCCGGY | 1 cut(s) | 463 |
| Cfr13I | GGNCC | 1 cut(s) | 152 |
| Csp6I | GTAC | 2 cut(s) | 349, 498 |
| CspAI | ACCGGT | 1 cut(s) | 463 |
| CviAII | CATG | 9 cut(s) | 264, 448, 635, 703, 1089, 1274, 1327, 1558, 1569 |
| CviQI | GTAC | 2 cut(s) | 349, 498 |
| DdeI | CTNAG | 5 cut(s) | 114, 148, 330, 1076, 1094 |
| DpnI | GATC | 8 cut(s) | 16, 186, 207, 248, 473, 906, 1074, 1199 |
| DpnII | GATC | 8 cut(s) | 14, 184, 205, 246, 471, 904, 1072, 1197 |
| Eam1104I | CTCTTC | 4 cut(s) | 116, 728, 1239, 1503 |
| EarI | CTCTTC | 4 cut(s) | 116, 728, 1239, 1503 |
| Ecl136II | GAGCTC | 3 cut(s) | 978, 1020, 1213 |
| Eco130I | CCWWGG | 3 cut(s) | 702, 738, 1088 |
| Eco24I | GRGCYC | 3 cut(s) | 980, 1022, 1215 |
| Eco31I | GGTCTC | 3 cut(s) | 30, 644, 683 |
| Eco53kI | GAGCTC | 3 cut(s) | 978, 1020, 1213 |
| Eco57I | CTGAAG | 1 cut(s) | 921 |
| Eco88I | CYCGRG | 3 cut(s) | 748, 1082, 1129 |
| Eco91I | GGTNACC | 1 cut(s) | 50 |
| EcoICRI | GAGCTC | 3 cut(s) | 978, 1020, 1213 |
| EcoO109I | RGGNCCY | 1 cut(s) | 152 |
| EcoO65I | GGTNACC | 1 cut(s) | 50 |
| EcoRI | GAATTC | 1 cut(s) | 1416 |
| EcoRII | CCWGG | 3 cut(s) | 154, 187, 619 |
| EcoT14I | CCWWGG | 3 cut(s) | 702, 738, 1088 |
| EcoT38I | GRGCYC | 3 cut(s) | 980, 1022, 1215 |
| ErhI | CCWWGG | 3 cut(s) | 702, 738, 1088 |
| Esp3I | CGTCTC | 1 cut(s) | 853 |
| FaeI | CATG | 9 cut(s) | 267, 451, 638, 706, 1092, 1277, 1330, 1561, 1572 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 122, 154 |
| FatI | CATG | 9 cut(s) | 263, 447, 634, 702, 1088, 1273, 1326, 1557, 1568 |
| FauI | CCCGC | 1 cut(s) | 860 |
| FauNDI | CATATG | 1 cut(s) | 1386 |
| Fnu4HI | GCNGC | 5 cut(s) | 6, 270, 294, 713, 1452 |
| FriOI | GRGCYC | 3 cut(s) | 980, 1022, 1215 |
| Fsp4HI | GCNGC | 5 cut(s) | 6, 270, 294, 713, 1452 |
| FspBI | CTAG | 1 cut(s) | 1349 |
| GlaI | GCGC | 1 cut(s) | 999 |
| GluI | GCNGC | 5 cut(s) | 6, 270, 294, 713, 1452 |
| GsuI | CTGGAG | 3 cut(s) | 237, 563, 1185 |
| HaeIII | GGCC | 4 cut(s) | 153, 260, 737, 833 |
| HapII | CCGG | 5 cut(s) | 45, 416, 464, 1032, 1474 |
| HhaI | GCGC | 1 cut(s) | 1000 |
| Hin1II | CATG | 9 cut(s) | 267, 451, 638, 706, 1092, 1277, 1330, 1561, 1572 |
| Hin6I | GCGC | 1 cut(s) | 998 |
| HinP1I | GCGC | 1 cut(s) | 998 |
| HincII | GTYRAC | 3 cut(s) | 1279, 1555, 1594 |
| HindII | GTYRAC | 3 cut(s) | 1279, 1555, 1594 |
| HindIII | AAGCTT | 3 cut(s) | 58, 786, 1391 |
| HinfI | GANTC | 6 cut(s) | 92, 280, 505, 1080, 1132, 1514 |
| HpaII | CCGG | 5 cut(s) | 45, 416, 464, 1032, 1474 |
| HphI | GGTGA | 2 cut(s) | 289, 544 |
| Hpy166II | GTNNAC | 5 cut(s) | 570, 1271, 1279, 1555, 1594 |
| Hpy188III | TCNNGA | 8 cut(s) | 18, 82, 550, 748, 1070, 1129, 1474, 1509 |
| Hpy8I | GTNNAC | 5 cut(s) | 570, 1271, 1279, 1555, 1594 |
| Hpy99I | CGWCG | 2 cut(s) | 1027, 1406 |
| HpyCH4III | ACNGT | 2 cut(s) | 24, 1382 |
| HpyCH4IV | ACGT | 2 cut(s) | 846, 960 |
| HpyCH4V | TGCA | 9 cut(s) | 211, 395, 578, 671, 792, 992, 1060, 1254, 1561 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 266, 392, 401, 1004, 1295, 1436, 1457 |
| HpyF3I | CTNAG | 5 cut(s) | 114, 148, 330, 1076, 1094 |
| HpySE526I | ACGT | 2 cut(s) | 846, 960 |
| Hsp92II | CATG | 9 cut(s) | 267, 451, 638, 706, 1092, 1277, 1330, 1561, 1572 |
| HspAI | GCGC | 1 cut(s) | 998 |
| Kpn2I | TCCGGA | 1 cut(s) | 1473 |
| Kzo9I | GATC | 8 cut(s) | 14, 184, 205, 246, 471, 904, 1072, 1197 |
| LguI | GCTCTTC | 1 cut(s) | 116 |
| LmnI | GCTCC | 5 cut(s) | 218, 698, 975, 1166, 1218 |
| Lsp1109I | GCAGC | 1 cut(s) | 280 |
| MaeI | CTAG | 1 cut(s) | 1349 |
| MaeII | ACGT | 2 cut(s) | 846, 960 |
| MaeIII | GTNAC | 4 cut(s) | 50, 310, 407, 1563 |
| MalI | GATC | 8 cut(s) | 16, 186, 207, 248, 473, 906, 1074, 1199 |
| MboI | GATC | 8 cut(s) | 14, 184, 205, 246, 471, 904, 1072, 1197 |
| MfeI | CAATTG | 1 cut(s) | 573 |
| MflI | RGATCY | 1 cut(s) | 14 |
| MhlI | GDGCHC | 4 cut(s) | 223, 980, 1022, 1215 |
| MlyI | GAGTC | 3 cut(s) | 1074, 1141, 1508 |
| MroI | TCCGGA | 1 cut(s) | 1473 |
| MroXI | GAANNNNTTC | 1 cut(s) | 134 |
| MseI | TTAA | 6 cut(s) | 494, 657, 893, 932, 1178, 1322 |
| MslI | CAYNNNNRTG | 3 cut(s) | 254, 464, 707 |
| MspA1I | CMGCKG | 1 cut(s) | 1163 |
| MspCI | CTTAAG | 2 cut(s) | 493, 892 |
| MspI | CCGG | 5 cut(s) | 45, 416, 464, 1032, 1474 |
| MspR9I | CCNGG | 3 cut(s) | 156, 189, 621 |
| MunI | CAATTG | 1 cut(s) | 573 |
| MvaI | CCWGG | 3 cut(s) | 156, 189, 621 |
| MvnI | CGCG | 1 cut(s) | 998 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 266, 392, 401, 1004, 1295, 1436, 1457 |
| NcoI | CCATGG | 2 cut(s) | 702, 1088 |
| NdeI | CATATG | 1 cut(s) | 1386 |
| NdeII | GATC | 8 cut(s) | 14, 184, 205, 246, 471, 904, 1072, 1197 |
| NlaIII | CATG | 9 cut(s) | 267, 451, 638, 706, 1092, 1277, 1330, 1561, 1572 |
| NlaIV | GGNNCC | 2 cut(s) | 700, 1230 |
| NmeAIII | GCCGAG | 2 cut(s) | 370, 713 |
| NmuCI | GTSAC | 2 cut(s) | 310, 407 |
| NspI | RCATGY | 3 cut(s) | 451, 1277, 1561 |
| PaeR7I | CTCGAG | 2 cut(s) | 748, 1082 |
| PciI | ACATGT | 1 cut(s) | 1273 |
| PciSI | GCTCTTC | 1 cut(s) | 116 |
| PdmI | GAANNNNTTC | 1 cut(s) | 134 |
| PfeI | GAWTC | 3 cut(s) | 92, 280, 505 |
| PflFI | GACNNNGTC | 1 cut(s) | 1550 |
| PfoI | TCCNGGA | 1 cut(s) | 187 |
| PinAI | ACCGGT | 1 cut(s) | 463 |
| PkrI | GCNGC | 5 cut(s) | 7, 271, 295, 714, 1453 |
| PleI | GAGTC | 3 cut(s) | 1074, 1140, 1508 |
| PpsI | GAGTC | 3 cut(s) | 1074, 1140, 1508 |
| PscI | ACATGT | 1 cut(s) | 1273 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1307 |
| Psp124BI | GAGCTC | 3 cut(s) | 980, 1022, 1215 |
| Psp1406I | AACGTT | 1 cut(s) | 960 |
| Psp6I | CCWGG | 3 cut(s) | 154, 187, 619 |
| PspEI | GGTNACC | 1 cut(s) | 50 |
| PspGI | CCWGG | 3 cut(s) | 154, 187, 619 |
| PspN4I | GGNNCC | 2 cut(s) | 700, 1230 |
| PspPI | GGNCC | 1 cut(s) | 152 |
| PspXI | VCTCGAGB | 1 cut(s) | 1082 |
| PstNI | CAGNNNCTG | 1 cut(s) | 17 |
| PsuI | RGATCY | 1 cut(s) | 14 |
| PsyI | GACNNNGTC | 1 cut(s) | 1550 |
| PvuII | CAGCTG | 1 cut(s) | 1163 |
| RsaI | GTAC | 2 cut(s) | 350, 499 |
| RsaNI | GTAC | 2 cut(s) | 349, 498 |
| RseI | CAYNNNNRTG | 3 cut(s) | 254, 464, 707 |
| SacI | GAGCTC | 3 cut(s) | 980, 1022, 1215 |
| SapI | GCTCTTC | 1 cut(s) | 116 |
| SaqAI | TTAA | 6 cut(s) | 494, 657, 893, 932, 1178, 1322 |
| SatI | GCNGC | 5 cut(s) | 6, 270, 294, 713, 1452 |
| Sau3AI | GATC | 8 cut(s) | 14, 184, 205, 246, 471, 904, 1072, 1197 |
| Sau96I | GGNCC | 1 cut(s) | 152 |
| ScaI | AGTACT | 1 cut(s) | 350 |
| SchI | GAGTC | 3 cut(s) | 1074, 1141, 1508 |
| ScrFI | CCNGG | 3 cut(s) | 156, 189, 621 |
| SduI | GDGCHC | 4 cut(s) | 223, 980, 1022, 1215 |
| SfcI | CTRYAG | 1 cut(s) | 9 |
| Sfr274I | CTCGAG | 2 cut(s) | 748, 1082 |
| SlaI | CTCGAG | 2 cut(s) | 748, 1082 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 254, 464, 707 |
| SmlI | CTYRAG | 4 cut(s) | 493, 748, 892, 1082 |
| SmoI | CTYRAG | 4 cut(s) | 493, 748, 892, 1082 |
| SsiI | CCGC | 7 cut(s) | 5, 48, 269, 713, 768, 867, 1452 |
| SspMI | CTAG | 1 cut(s) | 1349 |
| SstI | GAGCTC | 3 cut(s) | 980, 1022, 1215 |
| StyD4I | CCNGG | 3 cut(s) | 154, 187, 619 |
| StyI | CCWWGG | 3 cut(s) | 702, 738, 1088 |
| TaaI | ACNGT | 2 cut(s) | 24, 1382 |
| TaiI | ACGT | 2 cut(s) | 849, 963 |
| TaqI | TCGA | 6 cut(s) | 81, 749, 907, 1022, 1083, 1193 |
| TatI | WGTACW | 1 cut(s) | 348 |
| TauI | GCSGC | 4 cut(s) | 8, 272, 715, 1454 |
| TfiI | GAWTC | 3 cut(s) | 92, 280, 505 |
| Tru1I | TTAA | 6 cut(s) | 494, 657, 893, 932, 1178, 1322 |
| Tru9I | TTAA | 6 cut(s) | 494, 657, 893, 932, 1178, 1322 |
| TseFI | GTSAC | 2 cut(s) | 310, 407 |
| TseI | GCWGC | 1 cut(s) | 293 |
| Tsp45I | GTSAC | 2 cut(s) | 310, 407 |
| TspDTI | ATGAA | 5 cut(s) | 22, 249, 590, 1351, 1403 |
| TspGWI | ACGGA | 1 cut(s) | 970 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1550 |
| Vha464I | CTTAAG | 2 cut(s) | 493, 892 |
| XapI | RAATTY | 3 cut(s) | 133, 1241, 1416 |
| XceI | RCATGY | 3 cut(s) | 451, 1277, 1561 |
| XhoI | CTCGAG | 2 cut(s) | 748, 1082 |
| XmnI | GAANNNNTTC | 1 cut(s) | 134 |
| XspI | CTAG | 1 cut(s) | 1349 |
| ZrmI | AGTACT | 1 cut(s) | 350 |