Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0000712

Physical Location & Seq

Genomic Coordinates Reverse (-)

7644724 .. 7650049

Gene Structure 5326 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1042000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGGAAAACCAAAACCAAGAACAGCAACAGAGAGCGGGTACAGATGGTGCTTCCACTCGCATAACTGCAGCCATCTATTCGGAAGCCACACTACCCAGTAAACACTTTGATCTTGACCTTCAGCATACCATTGACCCCAAGGATGAGCCTCAGAAGCCTGGATGGAGAAAGTTTCTAGCACATGTTGGCCCTGGATTCCTTGTCTCTTTGGCATACCTTGATCCTGGCAATTTGGAAACTGATCTGCAAGCTGGAGCAAATCACAGATACGAGCTGCTATGGGTGATTCTTATTGGGTTGGTCTTCGCTCTCATAATCCAATCGCTCTCAGCAAACCTTGGCGTGACAACTGGGAAACATTTGTCAGAATTATGCAAGGCGGAATACCCACCATTTGTCAAATATTGTTTGTGGTTGCTAGCAGAAGTGGCCGTCATAGCGGCTGACATACCCGAAGGCAAATATATTCATTTCAAACTTAATTCATGTTTATGCATTAACATGTTGATTGGCACGGCCTTTGCTCTTAATTTACTGTTCAATATTCCGGTTTGGACTGGAGTACTCTTAACTGGTTTCAGTACTCTCCTCCTTCTTGGCCTGCAGAGATATGGGGTGAGGAAGCTGGAAATACTGATAGCAGTGCTGGTGTTTGTGATGGCTGCCTGTTTCTTTGGGGAAATGAGTTATGTCAAGCCTCCGGCATCGGGTGTGCTCCAAGGAATGTTCATCCCTAAGCTCAGCGGCCAACGAGCCACTGGCGATGCCATTGCCCTCTTGGGAGCCCTTGTTATGCCGCACAACCTTTTTCTCCACTCAGCTCTTGTGCTTTCTAGGAAAATTCCGAAATCTGTCCGTGGCATCAATGATGCATGTCGATATTTCTTGATAGAGAGTGGATTTGCATTATTTGTAGCATTTTTAATCAATGTTGCTATTATTTCCGTATCCGGCACTGTCTGCCATCAGAACAACCTCTCTGGTACGGAGGACAAAACATGCAGTGATCTTACTCTCAACTCTGCTTCCTTCCTTCTCCAGAATGTGTTGGGACGATCAAGCAAAATCTTTTATGCCATTGCACTATTAGCCTCAGGCCAAAGCTCCACAATTACAGGCACTTACGCAGGACAATTTGTCATGCAGGTTAATTTGAAATTTAACTTTTTCCTTCGTAGAGGAGTCCACTCTTCTTTGTGCATTCAAGGTTTTTTGGACATTAAGATGAAAAAATGGGCTAGAAACCTACTGACCAGGTGCATTGCCATTACACCAAGTCTCATCGTTTCCATTATAGGAGGGTCTTCTGGAGCAGGCAGACTCATTATCATTGCATCGATGATTCTATCTTTTGAGCTCCCATTTGCTCTAATTCCACTCCTCAAATTCAGCAGTAGTGCCACCAAGATGGGACCTCACAAGAATTCAATCTATATCATTGTGATATCATGGATTCTAGGTATGGGAATCATAGGCATCAACATCTACTACCTCAGCACAGGATTTGTGGGGTGGATAATCCACAGCAGTTTACCCAAAGTTGCAACTGTGTTCATTGGGATCTTGGTGTTCCCTCTCATGGCCATTTACATCCTTGCAGTCGTTTACCTAACCCTAAGAAAAGACACAGTGGTTACTTTTATTGAACCCACAAACAACGACCCCGCAGCCCAAAACCAAATGGAAAATGGGCTTCTCAATTCTAGTGACCTCCCAGTACCTTTCAGACAGGACTTAGCTGGCATACCTCTACCACAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0010035 GO:0010038 GO:0010044 GO:0015075 GO:0015083 GO:0015318 GO:0015690 GO:0016020 GO:0022857 GO:0030001 GO:0034220 GO:0042221 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0072512 GO:0098660 GO:1902602

KEGG Pathways

Metabolic & Signaling

ko04142 ko04216 ko04978 map04142 map04216 map04978

Pfam Domains

Protein Families

Nramp

Protein Analysis

587

Amino Acids

63.96

Weight (kDa)

8.95

Isoelectric Point (pI)

36.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nramp	PF01566	79 - 152	1.1e-22	Natural resistance-associated macrophage protein-like
Nramp	PF01566	162 - 388	5.7e-62	Natural resistance-associated macrophage protein-like
Nramp	PF01566	399 - 476	8.9e-18	Natural resistance-associated macrophage protein-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000712)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15960 AT1G80830 AT1G80830
fragaria_vesca	FvH4_2g27530 FvH4_6g28670 FvH4_6g28670 FvH4_6g28670 FvH4_6g28670 FvH4_6g28670 FvH4_6g28670 FvH4_6g28670 FvH4_6g28670 FvH4_6g28670 FvH4_6g28670
malus_domestica	MD00G1030300.v1.1 MD00G1042000.v1.1 MD14G1158400.v1.1 MD17G1222500.v1.1
prunus_persica	Prupe.1G492500_v2.0.a1 Prupe.3G097800_v2.0.a1 Prupe.3G097800_v2.0.a1 Prupe.3G097800_v2.0.a1 Prupe.3G097800_v2.0.a1 Prupe.3G097800_v2.0.a1 Prupe.3G097800_v2.0.a1 Prupe.3G097800_v2.0.a1 Prupe.3G097800_v2.0.a1 Prupe.3G097800_v2.0.a1
pyrus_communis	pycom116g00050 pycom14g13220 pycom17g22680
rosa_chinensis	RchiOBHm_Chr2g0133071 RchiOBHm_Chr6g0271151 RchiOBHm_Chr6g0296361 RchiOBHm_Chr6g0310261
rosa_laevigata	RLG00000011698 RLG00000011701 RLG00000019306
rosa_multiflora	Rmu_sc0000127.1_g000013 Rmu_sc0000279.1_g000004 Rmu_sc0008096.1_g000001 Rmu_sc0037233.1_g000001
rosa_roxburghii	Rroxscaffold_2G00111550 Rroxscaffold_2G00136120 Rroxscaffold_7G00176290 Rroxscaffold_7G00178510
rosa_rugosa	Rorug01G0010700 Rorug01G0010800 Rorug01G0062600 Rorug01G0087600 Rorug02G0179300 Rorug02G0309300 Rorug02G0309400 Rorug02G0309500 Rorug02G0309600 Rorug03G0345700 Rorug05G0313000 Rorug06G0261600.1
rosa_samantha	Rh2AG361900 Rh2BG367600 Rh2CG345100 Rh2DG384500 Rh3AG218600 Rh4AG271200 Rh5AG321100 Rh6AG181200 Rh6AG373200 Rh6AG492800 Rh6CG386600 Rh7DG314800
rosa_wichuraiana	Rw2G029420 Rw6G032540 Rw6G045020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1135
AccBSI	CCGCTC	1 cut(s)	35
AciI	CCGC	6 cut(s)	35, 380, 440, 744, 797, 1665
AclWI	GGATC	2 cut(s)	215, 1568
AcoI	YGGCCR	3 cut(s)	429, 745, 1581
AcsI	RAATTY	4 cut(s)	840, 1157, 1385, 1423
AcuI	CTGAAG	1 cut(s)	104
AfaI	GTAC	5 cut(s)	40, 564, 583, 985, 1719
AfiI	CCNNNNNNNGG	2 cut(s)	707, 1579
AflIII	ACRYGT	2 cut(s)	181, 501
AgsI	TTSAA	6 cut(s)	475, 541, 1156, 1205, 1428, 1646
AhdI	GACNNNNNGTC	1 cut(s)	1136
AjnI	CCWGG	4 cut(s)	157, 190, 223, 1253
AluBI	AGCT	8 cut(s)	251, 274, 625, 739, 821, 1104, 1357, 1739
AluI	AGCT	8 cut(s)	251, 274, 625, 739, 821, 1104, 1357, 1739
Alw21I	GWGCWC	2 cut(s)	717, 1359
Alw26I	GTCTC	2 cut(s)	208, 1283
AlwI	GGATC	2 cut(s)	215, 1568
AoxI	GGCC	7 cut(s)	187, 429, 516, 598, 745, 1096, 1581
ApeKI	GCWGC	4 cut(s)	68, 274, 662, 1667
ApoI	RAATTY	4 cut(s)	840, 1157, 1385, 1423
AspS9I	GGNCC	2 cut(s)	188, 1412
AsuHPI	GGTGA	2 cut(s)	295, 628
AsuNHI	GCTAGC	1 cut(s)	418
AvaII	GGWCC	1 cut(s)	1412
AxyI	CCTNAGG	1 cut(s)	1093
BalI	TGGCCA	1 cut(s)	1583
BanII	GRGCYC	2 cut(s)	787, 1359
BarI	GAAGNNNNNNTAC	2 cut(s)	75, 107
BbsI	GAAGAC	2 cut(s)	295, 1296
Bbv12I	GWGCWC	2 cut(s)	717, 1359
BbvCI	CCTCAGC	1 cut(s)	1493
BbvI	GCAGC	4 cut(s)	80, 261, 649, 1679
BccI	CCATC	6 cut(s)	38, 80, 156, 652, 972, 1402
BceAI	ACGGC	2 cut(s)	416, 531
BcgI	CGANNNNNNTGC	2 cut(s)	752, 786
BciT130I	CCWGG	4 cut(s)	159, 192, 225, 1255
BciVI	GTATCC	1 cut(s)	958
BcoDI	GTCTC	2 cut(s)	208, 1283
BfaI	CTAG	6 cut(s)	176, 419, 834, 1239, 1457, 1704
BfmI	CTRYAG	2 cut(s)	66, 602
BfuAI	ACCTGC	1 cut(s)	1135
BfuI	GTATCC	1 cut(s)	958
BisI	GCNGC	7 cut(s)	69, 275, 441, 663, 745, 797, 1668
BlpI	GCTNAGC	1 cut(s)	740
BlsI	GCNGC	7 cut(s)	70, 276, 442, 664, 746, 798, 1669
BmcAI	AGTACT	2 cut(s)	564, 583
Bme1390I	CCNGG	4 cut(s)	159, 192, 225, 1255
Bme18I	GGWCC	1 cut(s)	1412
BmeRI	GACNNNNNGTC	1 cut(s)	1136
BmgT120I	GGNCC	2 cut(s)	188, 1412
BmiI	GGNNCC	2 cut(s)	784, 1413
BmrFI	CCNGG	4 cut(s)	159, 192, 225, 1255
BmrI	ACTGGG	3 cut(s)	90, 360, 1709
BmsI	GCATC	6 cut(s)	713, 754, 859, 870, 1343, 1485
BmtI	GCTAGC	1 cut(s)	422
BmuI	ACTGGG	3 cut(s)	90, 360, 1709
BpiI	GAAGAC	2 cut(s)	295, 1296
BpmI	CTGGAG	4 cut(s)	273, 579, 1022, 1329
Bpu10I	CCTNAGC	2 cut(s)	735, 1493
Bpu1102I	GCTNAGC	1 cut(s)	740
Bsa29I	ATCGAT	1 cut(s)	1337
BsaJI	CCNNGG	5 cut(s)	138, 190, 337, 718, 856
BsaWI	WCCGGW	1 cut(s)	547
BsaXI	ACNNNNNCTCC	2 cut(s)	774, 804
Bsc4I	CCNNNNNNNGG	2 cut(s)	707, 1579
Bse1I	ACTGG	6 cut(s)	96, 355, 562, 577, 763, 1715
Bse21I	CCTNAGG	1 cut(s)	1093
Bse3DI	GCAATG	4 cut(s)	768, 1077, 1260, 1329
BseBI	CCWGG	4 cut(s)	159, 192, 225, 1255
BseCI	ATCGAT	1 cut(s)	1337
BseDI	CCNNGG	5 cut(s)	138, 190, 337, 718, 856
BseGI	GGATG	4 cut(s)	148, 167, 729, 1590
BseLI	CCNNNNNNNGG	2 cut(s)	707, 1579
BseMI	GCAATG	4 cut(s)	768, 1077, 1260, 1329
BseMII	CTCAG	6 cut(s)	164, 342, 754, 831, 1107, 1507
BseNI	ACTGG	6 cut(s)	96, 355, 562, 577, 763, 1715
BseRI	GAGGAG	3 cut(s)	578, 1194, 1370
BseXI	GCAGC	4 cut(s)	80, 261, 649, 1679
BshFI	GGCC	7 cut(s)	189, 431, 518, 600, 747, 1098, 1583
BshVI	ATCGAT	1 cut(s)	1337
BsiHKAI	GWGCWC	2 cut(s)	717, 1359
BsiSI	CCGG	3 cut(s)	548, 701, 951
BslFI	GGGAC	2 cut(s)	1065, 1425
BslI	CCNNNNNNNGG	2 cut(s)	707, 1579
BsmAI	GTCTC	2 cut(s)	208, 1283
BsmFI	GGGAC	2 cut(s)	1065, 1425
BsmI	GAATGC	1 cut(s)	1200
BsnI	GGCC	7 cut(s)	189, 431, 518, 600, 747, 1098, 1583
Bsp1286I	GDGCHC	3 cut(s)	717, 787, 1359
Bsp143I	GATC	6 cut(s)	109, 220, 241, 1006, 1055, 1560
Bsp1720I	GCTNAGC	1 cut(s)	740
BspACI	CCGC	6 cut(s)	35, 380, 440, 744, 797, 1665
BspANI	GGCC	7 cut(s)	189, 431, 518, 600, 747, 1098, 1583
BspCNI	CTCAG	6 cut(s)	163, 341, 753, 830, 1106, 1506
BspDI	ATCGAT	1 cut(s)	1337
BspLI	GGNNCC	2 cut(s)	784, 1413
BspMAI	CTGCAG	2 cut(s)	70, 606
BspMI	ACCTGC	1 cut(s)	1135
BspOI	GCTAGC	1 cut(s)	422
BspPI	GGATC	2 cut(s)	215, 1568
BsrBI	CCGCTC	1 cut(s)	35
BsrDI	GCAATG	4 cut(s)	768, 1077, 1260, 1329
BsrI	ACTGG	6 cut(s)	96, 355, 562, 577, 763, 1715
BssECI	CCNNGG	5 cut(s)	138, 190, 337, 718, 856
BssMI	GATC	6 cut(s)	109, 220, 241, 1006, 1055, 1560
BssT1I	CCWWGG	3 cut(s)	138, 337, 718
Bst2UI	CCWGG	4 cut(s)	159, 192, 225, 1255
Bst4CI	ACNGT	4 cut(s)	537, 958, 1549, 1630
Bst6I	CTCTTC	1 cut(s)	1195
BstAPI	GCANNNNNTGC	1 cut(s)	960
BstC8I	GCNNGC	5 cut(s)	249, 420, 602, 1315, 1741
BstDEI	CTNAG	9 cut(s)	150, 328, 735, 740, 817, 1093, 1493, 1616, 1735
BstDSI	CCRYGG	1 cut(s)	856
BstF5I	GGATG	4 cut(s)	148, 167, 729, 1590
BstKTI	GATC	6 cut(s)	112, 223, 244, 1009, 1058, 1563
BstMAI	GTCTC	2 cut(s)	208, 1283
BstMBI	GATC	6 cut(s)	109, 220, 241, 1006, 1055, 1560
BstMWI	GCNNNNNNNGC	5 cut(s)	154, 428, 437, 960, 1088
BstNI	CCWGG	4 cut(s)	159, 192, 225, 1255
BstNSI	RCATGY	4 cut(s)	185, 505, 876, 1002
BstSCI	CCNGG	4 cut(s)	157, 190, 223, 1253
BstSFI	CTRYAG	2 cut(s)	66, 602
BstV1I	GCAGC	4 cut(s)	80, 261, 649, 1679
BstV2I	GAAGAC	2 cut(s)	295, 1296
BstX2I	RGATCY	1 cut(s)	1560
BstXI	CCANNNNNNTGG	1 cut(s)	1408
BstYI	RGATCY	1 cut(s)	1560
Bsu15I	ATCGAT	1 cut(s)	1337
Bsu36I	CCTNAGG	1 cut(s)	1093
BsuI	GTATCC	1 cut(s)	958
BsuRI	GGCC	7 cut(s)	189, 431, 518, 600, 747, 1098, 1583
BsuTUI	ATCGAT	1 cut(s)	1337
BtgI	CCRYGG	1 cut(s)	856
BtgZI	GCGATG	1 cut(s)	777
BtsCI	GGATG	4 cut(s)	148, 167, 729, 1590
BtsI	GCAGTG	2 cut(s)	648, 1009
BtsIMutI	CAGTG	5 cut(s)	648, 756, 954, 1009, 1635
BveI	ACCTGC	1 cut(s)	1135
Cac8I	GCNNGC	5 cut(s)	249, 420, 602, 1315, 1741
Cfr13I	GGNCC	2 cut(s)	188, 1412
ClaI	ATCGAT	1 cut(s)	1337
CsiI	ACCWGGT	1 cut(s)	1253
Csp6I	GTAC	5 cut(s)	39, 563, 582, 984, 1718
CviAII	CATG	8 cut(s)	182, 486, 502, 873, 999, 1141, 1449, 1579
CviQI	GTAC	5 cut(s)	39, 563, 582, 984, 1718
DdeI	CTNAG	9 cut(s)	150, 328, 735, 740, 817, 1093, 1493, 1616, 1735
DpnI	GATC	6 cut(s)	111, 222, 243, 1008, 1057, 1562
DpnII	GATC	6 cut(s)	109, 220, 241, 1006, 1055, 1560
DriI	GACNNNNNGTC	1 cut(s)	1136
EaeI	YGGCCR	3 cut(s)	429, 745, 1581
Eam1104I	CTCTTC	1 cut(s)	1195
Eam1105I	GACNNNNNGTC	1 cut(s)	1136
EarI	CTCTTC	1 cut(s)	1195
EciI	GGCGGA	1 cut(s)	395
Ecl136II	GAGCTC	1 cut(s)	1357
Eco130I	CCWWGG	3 cut(s)	138, 337, 718
Eco24I	GRGCYC	2 cut(s)	787, 1359
Eco32I	GATATC	1 cut(s)	1446
Eco47I	GGWCC	1 cut(s)	1412
Eco53kI	GAGCTC	1 cut(s)	1357
Eco57I	CTGAAG	1 cut(s)	104
Eco81I	CCTNAGG	1 cut(s)	1093
EcoICRI	GAGCTC	1 cut(s)	1357
EcoO109I	RGGNCCY	1 cut(s)	1412
EcoRI	GAATTC	1 cut(s)	1423
EcoRII	CCWGG	4 cut(s)	157, 190, 223, 1253
EcoRV	GATATC	1 cut(s)	1446
EcoT14I	CCWWGG	3 cut(s)	138, 337, 718
EcoT22I	ATGCAT	2 cut(s)	497, 874
EcoT38I	GRGCYC	2 cut(s)	787, 1359
ErhI	CCWWGG	3 cut(s)	138, 337, 718
FaeI	CATG	8 cut(s)	185, 489, 505, 876, 1002, 1144, 1452, 1582
FaqI	GGGAC	2 cut(s)	1065, 1425
FatI	CATG	8 cut(s)	181, 485, 501, 872, 998, 1140, 1448, 1578
FauI	CCCGC	2 cut(s)	28, 1672
Fnu4HI	GCNGC	7 cut(s)	69, 275, 441, 663, 745, 797, 1668
FokI	GGATG	4 cut(s)	155, 174, 716, 1577
FriOI	GRGCYC	2 cut(s)	787, 1359
Fsp4HI	GCNGC	7 cut(s)	69, 275, 441, 663, 745, 797, 1668
FspBI	CTAG	6 cut(s)	176, 419, 834, 1239, 1457, 1704
GluI	GCNGC	7 cut(s)	69, 275, 441, 663, 745, 797, 1668
GsuI	CTGGAG	4 cut(s)	273, 579, 1022, 1329
HaeIII	GGCC	7 cut(s)	189, 431, 518, 600, 747, 1098, 1583
HapII	CCGG	3 cut(s)	548, 701, 951
Hin1II	CATG	8 cut(s)	185, 489, 505, 876, 1002, 1144, 1452, 1582
HinfI	GANTC	7 cut(s)	195, 286, 1182, 1320, 1342, 1453, 1467
HpaII	CCGG	3 cut(s)	548, 701, 951
HphI	GGTGA	2 cut(s)	295, 628
Hpy166II	GTNNAC	4 cut(s)	101, 1186, 1532, 1606
Hpy188I	TCNGA	6 cut(s)	82, 153, 367, 846, 969, 1727
Hpy188III	TCNNGA	4 cut(s)	113, 886, 1039, 1308
Hpy8I	GTNNAC	4 cut(s)	101, 1186, 1532, 1606
HpyAV	CCTTC	6 cut(s)	128, 449, 602, 1039, 1043, 1181
HpyCH4III	ACNGT	4 cut(s)	537, 958, 1549, 1630
HpyF10VI	GCNNNNNNNGC	5 cut(s)	154, 428, 437, 960, 1088
HpyF3I	CTNAG	9 cut(s)	150, 328, 735, 740, 817, 1093, 1493, 1616, 1735
Hsp92II	CATG	8 cut(s)	185, 489, 505, 876, 1002, 1144, 1452, 1582
Kzo9I	GATC	6 cut(s)	109, 220, 241, 1006, 1055, 1560
LmnI	GCTCC	6 cut(s)	254, 720, 782, 1109, 1310, 1362
Lsp1109I	GCAGC	4 cut(s)	80, 261, 649, 1679
LweI	GCATC	6 cut(s)	713, 754, 859, 870, 1343, 1485
MabI	ACCWGGT	1 cut(s)	1253
MaeI	CTAG	6 cut(s)	176, 419, 834, 1239, 1457, 1704
MaeIII	GTNAC	3 cut(s)	343, 1633, 1706
MalI	GATC	6 cut(s)	111, 222, 243, 1008, 1057, 1562
MbiI	CCGCTC	1 cut(s)	35
MboI	GATC	6 cut(s)	109, 220, 241, 1006, 1055, 1560
MboII	GAAGA	3 cut(s)	295, 1182, 1296
MflI	RGATCY	1 cut(s)	1560
MhlI	GDGCHC	3 cut(s)	717, 787, 1359
MlsI	TGGCCA	1 cut(s)	1583
MluNI	TGGCCA	1 cut(s)	1583
MlyI	GAGTC	2 cut(s)	1191, 1314
Mox20I	TGGCCA	1 cut(s)	1583
Mph1103I	ATGCAT	2 cut(s)	497, 874
MscI	TGGCCA	1 cut(s)	1583
MseI	TTAA	8 cut(s)	480, 498, 528, 569, 923, 1149, 1161, 1221
MslI	CAYNNNNRTG	4 cut(s)	490, 500, 1223, 1406
Msp20I	TGGCCA	1 cut(s)	1583
MspA1I	CMGCKG	1 cut(s)	744
MspI	CCGG	3 cut(s)	548, 701, 951
MspR9I	CCNGG	4 cut(s)	159, 192, 225, 1255
Mva1269I	GAATGC	1 cut(s)	1200
MvaI	CCWGG	4 cut(s)	159, 192, 225, 1255
MwoI	GCNNNNNNNGC	5 cut(s)	154, 428, 437, 960, 1088
NdeII	GATC	6 cut(s)	109, 220, 241, 1006, 1055, 1560
NheI	GCTAGC	1 cut(s)	418
NlaIII	CATG	8 cut(s)	185, 489, 505, 876, 1002, 1144, 1452, 1582
NlaIV	GGNNCC	2 cut(s)	784, 1413
NmuCI	GTSAC	2 cut(s)	343, 1706
NsiI	ATGCAT	2 cut(s)	497, 874
NspI	RCATGY	4 cut(s)	185, 505, 876, 1002
PciI	ACATGT	2 cut(s)	181, 501
PctI	GAATGC	1 cut(s)	1200
PfeI	GAWTC	5 cut(s)	195, 286, 1342, 1453, 1467
PkrI	GCNGC	7 cut(s)	70, 276, 442, 664, 746, 798, 1669
PleI	GAGTC	2 cut(s)	1190, 1314
PpsI	GAGTC	2 cut(s)	1190, 1314
PpuMI	RGGWCCY	1 cut(s)	1412
PscI	ACATGT	2 cut(s)	181, 501
Psp124BI	GAGCTC	1 cut(s)	1359
Psp5II	RGGWCCY	1 cut(s)	1412
Psp6I	CCWGG	4 cut(s)	157, 190, 223, 1253
PspGI	CCWGG	4 cut(s)	157, 190, 223, 1253
PspN4I	GGNNCC	2 cut(s)	784, 1413
PspPI	GGNCC	2 cut(s)	188, 1412
PspPPI	RGGWCCY	1 cut(s)	1412
PstI	CTGCAG	2 cut(s)	70, 606
PsuI	RGATCY	1 cut(s)	1560
RsaI	GTAC	5 cut(s)	40, 564, 583, 985, 1719
RsaNI	GTAC	5 cut(s)	39, 563, 582, 984, 1718
RseI	CAYNNNNRTG	4 cut(s)	490, 500, 1223, 1406
SacI	GAGCTC	1 cut(s)	1359
SaqAI	TTAA	8 cut(s)	480, 498, 528, 569, 923, 1149, 1161, 1221
SatI	GCNGC	7 cut(s)	69, 275, 441, 663, 745, 797, 1668
Sau3AI	GATC	6 cut(s)	109, 220, 241, 1006, 1055, 1560
Sau96I	GGNCC	2 cut(s)	188, 1412
ScaI	AGTACT	2 cut(s)	564, 583
SchI	GAGTC	2 cut(s)	1191, 1314
ScrFI	CCNGG	4 cut(s)	159, 192, 225, 1255
SduI	GDGCHC	3 cut(s)	717, 787, 1359
SexAI	ACCWGGT	1 cut(s)	1253
SfaNI	GCATC	6 cut(s)	713, 754, 859, 870, 1343, 1485
SfcI	CTRYAG	2 cut(s)	66, 602
SinI	GGWCC	1 cut(s)	1412
SmiMI	CAYNNNNRTG	4 cut(s)	490, 500, 1223, 1406
SsiI	CCGC	6 cut(s)	35, 380, 440, 744, 797, 1665
SspI	AATATT	2 cut(s)	404, 544
SspMI	CTAG	6 cut(s)	176, 419, 834, 1239, 1457, 1704
SstI	GAGCTC	1 cut(s)	1359
StyD4I	CCNGG	4 cut(s)	157, 190, 223, 1253
StyI	CCWWGG	3 cut(s)	138, 337, 718
TaaI	ACNGT	4 cut(s)	537, 958, 1549, 1630
TaqI	TCGA	2 cut(s)	877, 1337
TatI	WGTACW	2 cut(s)	562, 581
TauI	GCSGC	3 cut(s)	443, 747, 799
TfiI	GAWTC	5 cut(s)	195, 286, 1342, 1453, 1467
Tru1I	TTAA	8 cut(s)	480, 498, 528, 569, 923, 1149, 1161, 1221
Tru9I	TTAA	8 cut(s)	480, 498, 528, 569, 923, 1149, 1161, 1221
TscAI	CASTG	5 cut(s)	648, 763, 961, 1009, 1635
TseFI	GTSAC	2 cut(s)	343, 1706
TseI	GCWGC	4 cut(s)	68, 274, 662, 1667
Tsp45I	GTSAC	2 cut(s)	343, 1706
TspDTI	ATGAA	5 cut(s)	458, 474, 718, 1241, 1543
TspGWI	ACGGA	3 cut(s)	845, 934, 1001
TspRI	CASTG	5 cut(s)	648, 763, 961, 1009, 1635
VpaK11BI	GGWCC	1 cut(s)	1412
XapI	RAATTY	4 cut(s)	840, 1157, 1385, 1423
XceI	RCATGY	4 cut(s)	185, 505, 876, 1002
XcmI	CCANNNNNNNNNTGG	3 cut(s)	755, 775, 1685
XspI	CTAG	6 cut(s)	176, 419, 834, 1239, 1457, 1704
ZrmI	AGTACT	2 cut(s)	564, 583
Zsp2I	ATGCAT	2 cut(s)	497, 874

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.