Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000712

Physical Location & Seq

Genomic Coordinates Reverse (-)

16598932 .. 16603393

Gene Structure 4462 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0179300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGTGGGATCTCAATGACTCTCCTGATCAGAGACCAGTGGACGATGAATCCGAAGGCTGCTCTTCGCAGAAGACCAACTCCGGCGACGGAGACGACGACAAGGGCAAGAGGGTCGGATCCGTGTCCAATTCCAGCTCATCCGCCGTGGTCATCGAGGACGGATCAGACGTCGACGAAGACGCCTACCCCAACGCCAACAGGAAGCGCGGGAGCAAGATATTCGGGTTCTCCGTCACCGACGACGGCACTGATCCACAGCCCGTGACCCGGCAGTTCTTCCCGATGGACGAATCCTCCGAAATGGAACCCACACGGGCCGGCGGAGCTGTGGAAGCAGCGGCTGCTTCGCCTTCTTCTTCTTCTTTCCCGCGGGCCCACTGGGTCGGAGTCAAGTTCTGCCAGGCGGACTCGGGCGGGCCCGGAAAAGCAGCGGAGCCGTCGCCGCAGCAGCAGCAGCAGCAACAACAGCCGATGAAGAAGAGCCGGCGTGGGCCCCGGTCGAGGAGCTCACAGTACAGAGGGGTGACGTTTTACCGGAGGACCGGCCGTTGGGAATCCCATATATGGGATTGCGGGAAGCAAGTTTATCTTGGTGGATTCGACACAGCACATGCAGCTGCTCGAGCTTATGATAGAGCGGCGATCAAGTTCAGGGGAGTAGAGGCTGACATAAATTTTAACATTGAAGACTATGAAGAAGACTTGAAACAGATGAGCAATTTAACAAAGGAGGAATTTGTGCATGTACTTCGCCGACAAAGTACCGGGTTCCCTAGAGGTAGCTCGAAATATAGAGGAGTGACTTTGCACAAGTGTGGAAGATGGGAGGCTCGGATGGGCCAATTTTTAGGCAAAAAGTACGTCTATTTGGGATTGTTTGATACAGAGATTGATGCAGCAAGGGCCTATGACAAAGCTGCAATCAAGTGTAATGGCAAAGAAGCTGTCACTAACTTTGATCCCAGCATTTATGAGAAGCCTTCTAGTATTAATGCAGGAGATCACAATCTGGATTTGAGTTTGGGAAATTCAAAATCGAAGAAGAATAACCCGGCTTTTGGGACTGCACAAAATCACACCCATCAAAATGCTGCAATGGAACAACAAGAGCAGCCGTCTGCCTCTATGCAATTCGAAGCCGATTGGAGGAACAATCAAGGATTTCGGCCCAAGCCTAGAGAGGATAATGACATGCGTAGAAGAGATGGGTACCTGGAGAATGAAACCATGCAGCTTCTGCTCCGTACAAACCTCCAATCTCCATCCCCGACTCAAATGCACAAGTACGGGCAGTTTAATCAGTTCCGAAACCCTGCTGGAGAGACGCCGGCACAAATGCCTCACCATTTTCCTCCACATACTTTTAACCCACCAAATTATCAAATTCAGTTTCCGAGCAGCAGCGAGGTCGGAGCGCGCATTGGGAGTGATCTCACACTGTCGATGAGTGATCGACAACAATGGCAATCGGGTCATCCGTCCGAGTTATTTTTAAATGCTGCAGCATCATCAGGATTCCCACCGCAAATTAGACCACCTTCGCAAAATTGCTGGCTGCAGAAAAATAACGGGTTCCACTCTCTCGCTAGGCGCAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009657 GO:0009658 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0016787 GO:0016788 GO:0022613 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0140098 GO:1901259 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Hydrolase_3 UPF0054

Protein Analysis

532

Amino Acids

59.41

Weight (kDa)

7.24

Isoelectric Point (pI)

60.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	171 - 219	7e-10	AP2 domain
AP2	PF00847	262 - 312	2.8e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000712)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15960 AT1G80830 AT1G80830
fragaria_vesca	FvH4_2g27530 FvH4_6g28670 FvH4_6g28670 FvH4_6g28670 FvH4_6g28670 FvH4_6g28670 FvH4_6g28670 FvH4_6g28670 FvH4_6g28670 FvH4_6g28670 FvH4_6g28670
malus_domestica	MD00G1030300.v1.1 MD00G1042000.v1.1 MD14G1158400.v1.1 MD17G1222500.v1.1
prunus_persica	Prupe.1G492500_v2.0.a1 Prupe.3G097800_v2.0.a1 Prupe.3G097800_v2.0.a1 Prupe.3G097800_v2.0.a1 Prupe.3G097800_v2.0.a1 Prupe.3G097800_v2.0.a1 Prupe.3G097800_v2.0.a1 Prupe.3G097800_v2.0.a1 Prupe.3G097800_v2.0.a1 Prupe.3G097800_v2.0.a1
pyrus_communis	pycom116g00050 pycom14g13220 pycom17g22680
rosa_chinensis	RchiOBHm_Chr2g0133071 RchiOBHm_Chr6g0271151 RchiOBHm_Chr6g0296361 RchiOBHm_Chr6g0310261
rosa_laevigata	RLG00000011698 RLG00000011701 RLG00000019306
rosa_multiflora	Rmu_sc0000127.1_g000013 Rmu_sc0000279.1_g000004 Rmu_sc0008096.1_g000001 Rmu_sc0037233.1_g000001
rosa_roxburghii	Rroxscaffold_2G00111550 Rroxscaffold_2G00136120 Rroxscaffold_7G00176290 Rroxscaffold_7G00178510
rosa_rugosa	Rorug01G0010700 Rorug01G0010800 Rorug01G0062600 Rorug01G0087600 Rorug02G0179300 Rorug02G0309300 Rorug02G0309400 Rorug02G0309500 Rorug02G0309600 Rorug03G0345700 Rorug05G0313000 Rorug06G0261600.1
rosa_samantha	Rh2AG361900 Rh2BG367600 Rh2CG345100 Rh2DG384500 Rh3AG218600 Rh4AG271200 Rh5AG321100 Rh6AG181200 Rh6AG373200 Rh6AG492800 Rh6CG386600 Rh7DG314800
rosa_wichuraiana	Rw2G029420 Rw6G032540 Rw6G045020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	171
Acc65I	GGTACC	1 cut(s)	1209
AccB1I	GGYRCC	1 cut(s)	1209
AccBSI	CCGCTC	1 cut(s)	638
AccI	GTMKAC	1 cut(s)	171
AccII	CGCG	3 cut(s)	207, 370, 1417
AclWI	GGATC	6 cut(s)	15, 111, 124, 169, 245, 953
AcoI	YGGCCR	1 cut(s)	544
AcsI	RAATTY	4 cut(s)	673, 734, 1027, 1383
AcyI	GRCGYC	3 cut(s)	168, 180, 1325
AfaI	GTAC	7 cut(s)	515, 747, 763, 860, 1211, 1246, 1286
AfiI	CCNNNNNNNGG	7 cut(s)	267, 501, 549, 564, 565, 1058, 1146
AgsI	TTSAA	3 cut(s)	686, 706, 1032
AjnI	CCWGG	2 cut(s)	399, 1212
AleI	CACNNNNGTG	1 cut(s)	813
AluBI	AGCT	9 cut(s)	135, 326, 507, 617, 626, 783, 917, 944, 1234
AluI	AGCT	9 cut(s)	135, 326, 507, 617, 626, 783, 917, 944, 1234
Alw21I	GWGCWC	1 cut(s)	509
Alw26I	GTCTC	3 cut(s)	25, 84, 1316
AlwI	GGATC	6 cut(s)	15, 111, 124, 169, 245, 953
AlwNI	CAGNNNCTG	2 cut(s)	341, 1237
Ama87I	CYCGRG	2 cut(s)	409, 621
AoxI	GGCC	8 cut(s)	315, 372, 416, 491, 544, 838, 903, 1166
ApaI	GGGCCC	3 cut(s)	376, 420, 495
ApoI	RAATTY	4 cut(s)	673, 734, 1027, 1383
ArsI	GACNNNNNNTTYG	4 cut(s)	846, 878, 930, 962
AseI	ATTAAT	1 cut(s)	990
Asp718I	GGTACC	1 cut(s)	1209
AspLEI	GCGC	4 cut(s)	207, 1417, 1419, 1593
AsuC2I	CCSGG	5 cut(s)	268, 420, 496, 766, 1052
AsuHPI	GGTGA	3 cut(s)	226, 535, 1334
AsuII	TTCGAA	1 cut(s)	1134
AvaI	CYCGRG	2 cut(s)	409, 621
AvaII	GGWCC	1 cut(s)	540
BaeGI	GKGCMC	3 cut(s)	376, 420, 495
BamHI	GGATCC	1 cut(s)	116
BanI	GGYRCC	1 cut(s)	1209
BanII	GRGCYC	4 cut(s)	376, 420, 495, 509
BbsI	GAAGAC	4 cut(s)	77, 183, 693, 705
Bbv12I	GWGCWC	1 cut(s)	509
BccI	CCATC	6 cut(s)	277, 816, 829, 1089, 1199, 1270
BceAI	ACGGC	5 cut(s)	128, 259, 421, 531, 1099
BciT130I	CCWGG	2 cut(s)	401, 1214
BclI	TGATCA	1 cut(s)	25
BcnI	CCSGG	5 cut(s)	268, 420, 496, 766, 1052
BcoDI	GTCTC	3 cut(s)	25, 84, 1316
BfaI	CTAG	4 cut(s)	774, 984, 1176, 1587
BfmI	CTRYAG	2 cut(s)	1500, 1556
Bme1390I	CCNGG	7 cut(s)	268, 401, 420, 496, 766, 1052, 1214
Bme18I	GGWCC	1 cut(s)	540
BmeT110I	CYCGRG	2 cut(s)	409, 621
BmrFI	CCNGG	7 cut(s)	268, 401, 420, 496, 766, 1052, 1214
BmrI	ACTGGG	1 cut(s)	388
BmsI	GCATC	2 cut(s)	883, 1514
BmuI	ACTGGG	1 cut(s)	388
BpiI	GAAGAC	4 cut(s)	77, 183, 693, 705
BpmI	CTGGAG	2 cut(s)	1235, 1338
Bpu14I	TTCGAA	1 cut(s)	1134
BpuMI	CCSGG	5 cut(s)	268, 420, 496, 766, 1052
BsaBI	GATNNNNATC	1 cut(s)	1005
BsaHI	GRCGYC	3 cut(s)	168, 180, 1325
BsaI	GGTCTC	1 cut(s)	25
BsaJI	CCNNGG	3 cut(s)	144, 368, 494
BsaWI	WCCGGW	1 cut(s)	534
BsaXI	ACNNNNNCTCC	2 cut(s)	278, 308
Bsc4I	CCNNNNNNNGG	7 cut(s)	267, 501, 549, 564, 565, 1058, 1146
Bse118I	RCCGGY	4 cut(s)	317, 483, 542, 1327
Bse1I	ACTGG	2 cut(s)	35, 383
Bse3DI	GCAATG	1 cut(s)	1101
Bse8I	GATNNNNATC	1 cut(s)	1005
BseBI	CCWGG	2 cut(s)	401, 1214
BseDI	CCNNGG	3 cut(s)	144, 368, 494
BseGI	GGATG	4 cut(s)	137, 840, 1262, 1474
BseJI	GATNNNNATC	1 cut(s)	1005
BseLI	CCNNNNNNNGG	7 cut(s)	267, 501, 549, 564, 565, 1058, 1146
BseMI	GCAATG	1 cut(s)	1101
BseNI	ACTGG	2 cut(s)	35, 383
BsePI	GCGCGC	1 cut(s)	1415
BseRI	GAGGAG	2 cut(s)	517, 810
BseSI	GKGCMC	3 cut(s)	376, 420, 495
BseX3I	CGGCCG	1 cut(s)	544
BseYI	CCCAGC	1 cut(s)	962
BsgI	GTGCAG	1 cut(s)	1050
Bsh1236I	CGCG	3 cut(s)	207, 370, 1417
Bsh1285I	CGRYCG	2 cut(s)	500, 547
BshFI	GGCC	8 cut(s)	317, 374, 418, 493, 546, 840, 905, 1168
BshNI	GGYRCC	1 cut(s)	1209
BsiEI	CGRYCG	2 cut(s)	500, 547
BsiHKAI	GWGCWC	1 cut(s)	509
BsiHKCI	CYCGRG	2 cut(s)	409, 621
BslFI	GGGAC	1 cut(s)	1075
BslI	CCNNNNNNNGG	7 cut(s)	267, 501, 549, 564, 565, 1058, 1146
BsmAI	GTCTC	3 cut(s)	25, 84, 1316
BsmBI	CGTCTC	2 cut(s)	84, 1316
BsmFI	GGGAC	1 cut(s)	1075
BsnI	GGCC	8 cut(s)	317, 374, 418, 493, 546, 840, 905, 1168
Bso31I	GGTCTC	1 cut(s)	25
BsoBI	CYCGRG	2 cut(s)	409, 621
Bsp119I	TTCGAA	1 cut(s)	1134
Bsp120I	GGGCCC	3 cut(s)	372, 416, 491
Bsp1286I	GDGCHC	4 cut(s)	376, 420, 495, 509
BspANI	GGCC	8 cut(s)	317, 374, 418, 493, 546, 840, 905, 1168
BspFNI	CGCG	3 cut(s)	207, 370, 1417
BspMAI	CTGCAG	2 cut(s)	1504, 1560
BspPI	GGATC	6 cut(s)	15, 111, 124, 169, 245, 953
BspQI	GCTCTTC	2 cut(s)	67, 473
BspT104I	TTCGAA	1 cut(s)	1134
BspT107I	GGYRCC	1 cut(s)	1209
BspTNI	GGTCTC	1 cut(s)	25
BsrBI	CCGCTC	1 cut(s)	638
BsrDI	GCAATG	1 cut(s)	1101
BsrFI	RCCGGY	4 cut(s)	317, 483, 542, 1327
BsrI	ACTGG	2 cut(s)	35, 383
BssAI	RCCGGY	4 cut(s)	317, 483, 542, 1327
BssECI	CCNNGG	3 cut(s)	144, 368, 494
BssHII	GCGCGC	1 cut(s)	1415
BssNI	GRCGYC	3 cut(s)	168, 180, 1325
Bst2UI	CCWGG	2 cut(s)	401, 1214
Bst4CI	ACNGT	2 cut(s)	513, 1440
Bst6I	CTCTTC	3 cut(s)	67, 473, 1195
BstACI	GRCGYC	3 cut(s)	168, 180, 1325
BstAPI	GCANNNNNTGC	2 cut(s)	341, 1237
BstBI	TTCGAA	1 cut(s)	1134
BstC8I	GCNNGC	7 cut(s)	319, 372, 416, 485, 1329, 1417, 1553
BstDSI	CCRYGG	2 cut(s)	144, 368
BstF5I	GGATG	4 cut(s)	137, 840, 1262, 1474
BstFNI	CGCG	3 cut(s)	207, 370, 1417
BstHHI	GCGC	4 cut(s)	207, 1417, 1419, 1593
BstMAI	GTCTC	3 cut(s)	25, 84, 1316
BstMCI	CGRYCG	2 cut(s)	500, 547
BstNI	CCWGG	2 cut(s)	401, 1214
BstNSI	RCATGY	3 cut(s)	614, 746, 1195
BstSCI	CCNGG	7 cut(s)	266, 399, 418, 494, 764, 1050, 1212
BstSFI	CTRYAG	2 cut(s)	1500, 1556
BstSLI	GKGCMC	3 cut(s)	376, 420, 495
BstUI	CGCG	3 cut(s)	207, 370, 1417
BstV2I	GAAGAC	4 cut(s)	77, 183, 693, 705
BstX2I	RGATCY	2 cut(s)	7, 116
BstYI	RGATCY	2 cut(s)	7, 116
BstZI	CGGCCG	1 cut(s)	544
BsuRI	GGCC	8 cut(s)	317, 374, 418, 493, 546, 840, 905, 1168
BtgI	CCRYGG	2 cut(s)	144, 368
BtsCI	GGATG	4 cut(s)	137, 840, 1262, 1474
BtsIMutI	CAGTG	4 cut(s)	42, 246, 376, 1436
Cac8I	GCNNGC	7 cut(s)	319, 372, 416, 485, 1329, 1417, 1553
CaiI	CAGNNNCTG	2 cut(s)	341, 1237
CfoI	GCGC	4 cut(s)	207, 1417, 1419, 1593
Cfr10I	RCCGGY	4 cut(s)	317, 483, 542, 1327
Cfr42I	CCGCGG	1 cut(s)	371
CseI	GACGC	2 cut(s)	188, 1333
Csp6I	GTAC	7 cut(s)	514, 746, 762, 859, 1210, 1245, 1285
CviAII	CATG	4 cut(s)	611, 743, 1192, 1228
CviQI	GTAC	7 cut(s)	514, 746, 762, 859, 1210, 1245, 1285
DraI	TTTAAA	1 cut(s)	1494
EaeI	YGGCCR	1 cut(s)	544
EagI	CGGCCG	1 cut(s)	544
Eam1104I	CTCTTC	3 cut(s)	67, 473, 1195
EarI	CTCTTC	3 cut(s)	67, 473, 1195
EciI	GGCGGA	3 cut(s)	130, 336, 419
Ecl136II	GAGCTC	1 cut(s)	507
EclXI	CGGCCG	1 cut(s)	544
Eco24I	GRGCYC	4 cut(s)	376, 420, 495, 509
Eco31I	GGTCTC	1 cut(s)	25
Eco47I	GGWCC	1 cut(s)	540
Eco52I	CGGCCG	1 cut(s)	544
Eco53kI	GAGCTC	1 cut(s)	507
Eco88I	CYCGRG	2 cut(s)	409, 621
EcoICRI	GAGCTC	1 cut(s)	507
EcoO109I	RGGNCCY	2 cut(s)	492, 903
EcoRII	CCWGG	2 cut(s)	399, 1212
EcoT38I	GRGCYC	4 cut(s)	376, 420, 495, 509
Esp3I	CGTCTC	2 cut(s)	84, 1316
FaeI	CATG	4 cut(s)	614, 746, 1195, 1231
FalI	AAGNNNNNCTT	2 cut(s)	573, 605
FaqI	GGGAC	1 cut(s)	1075
FatI	CATG	4 cut(s)	610, 742, 1191, 1227
FauI	CCCGC	5 cut(s)	200, 363, 375, 407, 566
FbaI	TGATCA	1 cut(s)	25
FblI	GTMKAC	1 cut(s)	171
FokI	GGATG	4 cut(s)	124, 847, 1249, 1461
FriOI	GRGCYC	4 cut(s)	376, 420, 495, 509
FspBI	CTAG	4 cut(s)	774, 984, 1176, 1587
GlaI	GCGC	4 cut(s)	206, 1416, 1418, 1592
GsaI	CCCAGC	1 cut(s)	966
GsuI	CTGGAG	2 cut(s)	1235, 1338
HaeIII	GGCC	8 cut(s)	317, 374, 418, 493, 546, 840, 905, 1168
HgaI	GACGC	2 cut(s)	188, 1333
HhaI	GCGC	4 cut(s)	207, 1417, 1419, 1593
Hin1I	GRCGYC	3 cut(s)	168, 180, 1325
Hin1II	CATG	4 cut(s)	614, 746, 1195, 1231
Hin6I	GCGC	4 cut(s)	205, 1415, 1417, 1591
HinP1I	GCGC	4 cut(s)	205, 1415, 1417, 1591
HincII	GTYRAC	1 cut(s)	172
HindII	GTYRAC	1 cut(s)	172
HinfI	GANTC	9 cut(s)	17, 47, 290, 387, 407, 554, 597, 1270, 1515
HphI	GGTGA	3 cut(s)	226, 535, 1334
Hpy166II	GTNNAC	2 cut(s)	40, 172
Hpy188III	TCNNGA	4 cut(s)	23, 280, 1010, 1512
Hpy8I	GTNNAC	2 cut(s)	40, 172
Hpy99I	CGWCG	7 cut(s)	89, 98, 173, 176, 242, 245, 442
HpyAV	CCTTC	4 cut(s)	47, 360, 990, 1548
HpyCH4III	ACNGT	2 cut(s)	513, 1440
HpyCH4IV	ACGT	3 cut(s)	168, 527, 861
HpySE526I	ACGT	3 cut(s)	168, 527, 861
Hsp92I	GRCGYC	3 cut(s)	168, 180, 1325
Hsp92II	CATG	4 cut(s)	614, 746, 1195, 1231
HspAI	GCGC	4 cut(s)	205, 1415, 1417, 1591
KpnI	GGTACC	1 cut(s)	1213
KroI	GCCGGC	3 cut(s)	317, 483, 1327
KroNI	GCCGGC	3 cut(s)	319, 485, 1329
Ksp22I	TGATCA	1 cut(s)	25
KspI	CCGCGG	1 cut(s)	371
LguI	GCTCTTC	2 cut(s)	67, 473
LmnI	GCTCC	6 cut(s)	210, 323, 433, 504, 1245, 1412
LweI	GCATC	2 cut(s)	883, 1514
MaeI	CTAG	4 cut(s)	774, 984, 1176, 1587
MaeII	ACGT	3 cut(s)	168, 527, 861
MaeIII	GTNAC	5 cut(s)	232, 262, 523, 799, 946
MbiI	CCGCTC	1 cut(s)	638
MflI	RGATCY	2 cut(s)	7, 116
MhlI	GDGCHC	4 cut(s)	376, 420, 495, 509
MlyI	GAGTC	4 cut(s)	11, 396, 401, 1264
MmeI	TCCRAC	3 cut(s)	94, 364, 1390
MroNI	GCCGGC	3 cut(s)	317, 483, 1327
MseI	TTAA	6 cut(s)	678, 722, 990, 1296, 1365, 1493
MslI	CAYNNNNRTG	2 cut(s)	813, 1086
MspA1I	CMGCKG	4 cut(s)	338, 370, 431, 617
MspR9I	CCNGG	7 cut(s)	268, 401, 420, 496, 766, 1052, 1214
MvaI	CCWGG	2 cut(s)	401, 1214
MvnI	CGCG	3 cut(s)	207, 370, 1417
NaeI	GCCGGC	3 cut(s)	319, 485, 1329
NciI	CCSGG	5 cut(s)	268, 420, 496, 766, 1052
NgoMIV	GCCGGC	3 cut(s)	317, 483, 1327
NlaIII	CATG	4 cut(s)	614, 746, 1195, 1231
NmuCI	GTSAC	5 cut(s)	232, 262, 523, 799, 946
NspI	RCATGY	3 cut(s)	614, 746, 1195
NspV	TTCGAA	1 cut(s)	1134
OliI	CACNNNNGTG	1 cut(s)	813
PaeR7I	CTCGAG	1 cut(s)	621
PauI	GCGCGC	1 cut(s)	1415
PciSI	GCTCTTC	2 cut(s)	67, 473
PcsI	WCGNNNNNNNCGW	6 cut(s)	48, 93, 165, 228, 294, 1475
PdiI	GCCGGC	3 cut(s)	319, 485, 1329
PfeI	GAWTC	5 cut(s)	47, 290, 554, 597, 1515
PleI	GAGTC	4 cut(s)	11, 395, 401, 1264
PpsI	GAGTC	4 cut(s)	11, 395, 401, 1264
PshBI	ATTAAT	1 cut(s)	990
Psp124BI	GAGCTC	1 cut(s)	509
Psp6I	CCWGG	2 cut(s)	399, 1212
PspFI	CCCAGC	1 cut(s)	962
PspGI	CCWGG	2 cut(s)	399, 1212
PspOMI	GGGCCC	3 cut(s)	372, 416, 491
PspXI	VCTCGAGB	1 cut(s)	621
PstI	CTGCAG	2 cut(s)	1504, 1560
PstNI	CAGNNNCTG	2 cut(s)	341, 1237
PsuI	RGATCY	2 cut(s)	7, 116
PteI	GCGCGC	1 cut(s)	1415
PvuII	CAGCTG	1 cut(s)	617
RsaI	GTAC	7 cut(s)	515, 747, 763, 860, 1211, 1246, 1286
RsaNI	GTAC	7 cut(s)	514, 746, 762, 859, 1210, 1245, 1285
RseI	CAYNNNNRTG	2 cut(s)	813, 1086
SacI	GAGCTC	1 cut(s)	509
SacII	CCGCGG	1 cut(s)	371
SalI	GTCGAC	1 cut(s)	170
SapI	GCTCTTC	2 cut(s)	67, 473
SaqAI	TTAA	6 cut(s)	678, 722, 990, 1296, 1365, 1493
SchI	GAGTC	4 cut(s)	11, 396, 401, 1264
ScrFI	CCNGG	7 cut(s)	268, 401, 420, 496, 766, 1052, 1214
SduI	GDGCHC	4 cut(s)	376, 420, 495, 509
SfaNI	GCATC	2 cut(s)	883, 1514
SfcI	CTRYAG	2 cut(s)	1500, 1556
Sfr274I	CTCGAG	1 cut(s)	621
Sfr303I	CCGCGG	1 cut(s)	371
SfuI	TTCGAA	1 cut(s)	1134
SgrBI	CCGCGG	1 cut(s)	371
SgrDI	CGTCGACG	1 cut(s)	170
SinI	GGWCC	1 cut(s)	540
SlaI	CTCGAG	1 cut(s)	621
SmiMI	CAYNNNNRTG	2 cut(s)	813, 1086
SmlI	CTYRAG	1 cut(s)	621
SmoI	CTYRAG	1 cut(s)	621
SspMI	CTAG	4 cut(s)	774, 984, 1176, 1587
SstI	GAGCTC	1 cut(s)	509
StyD4I	CCNGG	7 cut(s)	266, 399, 418, 494, 764, 1050, 1212
TaaI	ACNGT	2 cut(s)	513, 1440
TaiI	ACGT	3 cut(s)	171, 530, 864
TatI	WGTACW	2 cut(s)	513, 745
TauI	GCSGC	3 cut(s)	341, 445, 641
TfiI	GAWTC	5 cut(s)	47, 290, 554, 597, 1515
Tru1I	TTAA	6 cut(s)	678, 722, 990, 1296, 1365, 1493
Tru9I	TTAA	6 cut(s)	678, 722, 990, 1296, 1365, 1493
TscAI	CASTG	4 cut(s)	42, 253, 383, 1443
TseFI	GTSAC	5 cut(s)	232, 262, 523, 799, 946
Tsp45I	GTSAC	5 cut(s)	232, 262, 523, 799, 946
TspDTI	ATGAA	4 cut(s)	60, 488, 708, 1236
TspGWI	ACGGA	6 cut(s)	102, 109, 174, 220, 1232, 1467
TspRI	CASTG	4 cut(s)	42, 253, 383, 1443
VpaK11BI	GGWCC	1 cut(s)	540
VspI	ATTAAT	1 cut(s)	990
XapI	RAATTY	4 cut(s)	673, 734, 1027, 1383
XceI	RCATGY	3 cut(s)	614, 746, 1195
XhoI	CTCGAG	1 cut(s)	621
XmiI	GTMKAC	1 cut(s)	171
XspI	CTAG	4 cut(s)	774, 984, 1176, 1587
ZraI	GACGTC	1 cut(s)	169

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.