Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003502

Physical Location & Seq

Genomic Coordinates Reverse (-)

13437974 .. 13439923

Gene Structure 1950 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G31570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 510 bp

ATGGCGGATGAATCTCCAAAGTCTATCTACGACTTCACCGTCAAGGATATCGGAGGTAACGATGTGAGTTTGGACCAATACAAAGGCAAAACTCTTTTGGTTGTAAACGTTGCTTCCAAATGTGGTCTGACGGATGCGAACTACAAGGAACTGAATGTTCTGTACGAGAAATACAAGGAGCAAGGGTTGGAGATATTAGCATTCCCGTGTAATCAGTTCTTAGGACAAGAACCAGGAAACAATGAAGAGATTCAACAAACTGTCTGCACCAGGTTCAAAGCTGAATTCCCCATCTTTGACAAGGTGGATGTGAACGGTAAGAACACGGCACCATTATACAAGTACTTGAAAGCAGAGAAAGGAGGTTTGCTCATTGATGCTATCAAATGGAACTTCACCAAATTCTTGGTTTCTCCTGATGGCAAGGTCTTACAGAGATATTCTCCCAGAACCTCTCCTCTTCAATTCGAGAAGGACATTCAAACTGCGTTGGGACAGGCCTCTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005768 GO:0005783 GO:0005794 GO:0005802 GO:0005829 GO:0005886 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0012505 GO:0016020 GO:0023052 GO:0031410 GO:0031668 GO:0031982 GO:0031984 GO:0032870 GO:0033554 GO:0033993 GO:0042221 GO:0042493 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046677 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071944 GO:0097305 GO:0097306 GO:0097708 GO:0098791 GO:0104004 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00480 ko00590 ko04918 map00480 map00590 map04918

Pfam Domains

Protein Families

GSHPx

Protein Analysis

169

Amino Acids

18.94

Weight (kDa)

5.6

Isoelectric Point (pI)

31.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GSHPx	PF00255	9 - 117	1.9e-43	Glutathione peroxidase
AhpC-TSA	PF00578	9 - 72	2.5e-08	AhpC/TSA family
Redoxin	PF08534	9 - 68	3.6e-06	Redoxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Publication-ready

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Orthologous Genes (Group: OG0003502)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31570 AT2G43350 AT2G43350
fragaria_vesca	FvH4_6g25700
malus_domestica	MD04G1034400.v1.1 MD14G1027000.v1.1
prunus_persica	Prupe.1G186500_v2.0.a1 Prupe.1G186500_v2.0.a1
pyrus_communis	pycom14g02570
rosa_chinensis	RchiOBHm_Chr4g0400261 RchiOBHm_Chr4g0408201
rosa_laevigata	RLG00000008663 RLG00000015280
rosa_multiflora	Rmu_sc0001793.1_g000052 Rmu_sc0005466.1_g000001 Rmu_sc0007120.1_g000003
rosa_roxburghii	Rroxscaffold_1G00024180 Rroxscaffold_1G00051140 Rroxscaffold_4G00316840 Rroxscaffold_5G00352710 Rroxscaffold_5G00361080
rosa_rugosa	Rorug04G0084100 Rorug04G0184800
rosa_samantha	Rh1CG015500 Rh2AG152400 Rh2BG157900 Rh3BG160500 Rh4AG149100 Rh4BG145700 Rh4CG156100 Rh4DG142100 Rh5BG054800
rosa_wichuraiana	Rw1G001130 Rw3G028070 Rw4G012170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	38
AccB1I	GGYRCC	1 cut(s)	328
AciI	CCGC	1 cut(s)	5
AclI	AACGTT	1 cut(s)	108
AcsI	RAATTY	2 cut(s)	284, 401
AfaI	GTAC	2 cut(s)	164, 344
AgsI	TTSAA	5 cut(s)	254, 277, 349, 464, 482
AjnI	CCWGG	2 cut(s)	232, 269
AluBI	AGCT	1 cut(s)	281
AluI	AGCT	1 cut(s)	281
AoxI	GGCC	1 cut(s)	498
ApoI	RAATTY	2 cut(s)	284, 401
Asp700I	GAANNNNTTC	1 cut(s)	249
AspS9I	GGNCC	1 cut(s)	73
AsuHPI	GGTGA	2 cut(s)	28, 388
AvaII	GGWCC	1 cut(s)	73
BanI	GGYRCC	1 cut(s)	328
BccI	CCATC	2 cut(s)	299, 413
BceAI	ACGGC	1 cut(s)	342
BciT130I	CCWGG	2 cut(s)	234, 271
BmcAI	AGTACT	1 cut(s)	344
Bme1390I	CCNGG	2 cut(s)	234, 271
Bme18I	GGWCC	1 cut(s)	73
BmgT120I	GGNCC	1 cut(s)	73
BmiI	GGNNCC	1 cut(s)	330
BmrFI	CCNGG	2 cut(s)	234, 271
BmsI	GCATC	2 cut(s)	124, 367
BplI	GAGNNNNNCTC	4 cut(s)	354, 386, 427, 459
BsaXI	ACNNNNNCTCC	2 cut(s)	170, 200
BseBI	CCWGG	2 cut(s)	234, 271
BseGI	GGATG	3 cut(s)	13, 139, 313
BseRI	GAGGAG	1 cut(s)	447
BsgI	GTGCAG	1 cut(s)	250
BshFI	GGCC	1 cut(s)	500
BshNI	GGYRCC	1 cut(s)	328
BsmI	GAATGC	1 cut(s)	200
BsnI	GGCC	1 cut(s)	500
BspACI	CCGC	1 cut(s)	5
BspANI	GGCC	1 cut(s)	500
BspLI	GGNNCC	1 cut(s)	330
BspT107I	GGYRCC	1 cut(s)	328
Bst2UI	CCWGG	2 cut(s)	234, 271
Bst4CI	ACNGT	3 cut(s)	40, 262, 317
Bst6I	CTCTTC	2 cut(s)	240, 465
BstDEI	CTNAG	1 cut(s)	220
BstF5I	GGATG	3 cut(s)	13, 139, 313
BstNI	CCWGG	2 cut(s)	234, 271
BstSCI	CCNGG	2 cut(s)	232, 269
BstXI	CCANNNNNNTGG	1 cut(s)	406
BsuRI	GGCC	1 cut(s)	500
BtsCI	GGATG	3 cut(s)	13, 139, 313
Cfr13I	GGNCC	1 cut(s)	73
CsiI	ACCWGGT	1 cut(s)	269
Csp6I	GTAC	2 cut(s)	163, 343
CviJI	RGCY	2 cut(s)	281, 500
CviKI_1	RGCY	2 cut(s)	281, 500
CviQI	GTAC	2 cut(s)	163, 343
DdeI	CTNAG	1 cut(s)	220
DrdI	GACNNNNNNGTC	1 cut(s)	38
DseDI	GACNNNNNNGTC	1 cut(s)	38
Eam1104I	CTCTTC	2 cut(s)	240, 465
EarI	CTCTTC	2 cut(s)	240, 465
EciI	GGCGGA	1 cut(s)	20
Eco147I	AGGCCT	1 cut(s)	500
Eco32I	GATATC	1 cut(s)	49
Eco47I	GGWCC	1 cut(s)	73
EcoRI	GAATTC	1 cut(s)	284
EcoRII	CCWGG	2 cut(s)	232, 269
EcoRV	GATATC	1 cut(s)	49
FaiI	YATR	1 cut(s)	337
FokI	GGATG	3 cut(s)	20, 146, 320
HaeIII	GGCC	1 cut(s)	500
HinfI	GANTC	2 cut(s)	11, 250
HphI	GGTGA	2 cut(s)	28, 388
Hpy166II	GTNNAC	2 cut(s)	106, 313
Hpy188I	TCNGA	2 cut(s)	53, 129
Hpy188III	TCNNGA	2 cut(s)	416, 469
Hpy8I	GTNNAC	2 cut(s)	106, 313
HpyAV	CCTTC	1 cut(s)	466
HpyCH4III	ACNGT	3 cut(s)	40, 262, 317
HpyCH4IV	ACGT	1 cut(s)	108
HpyCH4V	TGCA	1 cut(s)	267
HpyF3I	CTNAG	1 cut(s)	220
HpySE526I	ACGT	1 cut(s)	108
LmnI	GCTCC	1 cut(s)	178
LpnPI	CCDG	7 cut(s)	219, 246, 256, 283, 429, 460, 482
LweI	GCATC	2 cut(s)	124, 367
MabI	ACCWGGT	1 cut(s)	269
MaeII	ACGT	1 cut(s)	108
MaeIII	GTNAC	1 cut(s)	56
MboII	GAAGA	3 cut(s)	257, 452, 495
MluCI	AATT	3 cut(s)	284, 401, 464
MmeI	TCCRAC	1 cut(s)	168
MnlI	CCTC	4 cut(s)	47, 356, 463, 468
MroXI	GAANNNNTTC	1 cut(s)	249
MseI	TTAA	1 cut(s)	508
MslI	CAYNNNNRTG	1 cut(s)	205
MspR9I	CCNGG	2 cut(s)	234, 271
Mva1269I	GAATGC	1 cut(s)	200
MvaI	CCWGG	2 cut(s)	234, 271
NlaIV	GGNNCC	1 cut(s)	330
PceI	AGGCCT	1 cut(s)	500
PcsI	WCGNNNNNNNCGW	2 cut(s)	36, 57
PctI	GAATGC	1 cut(s)	200
PdmI	GAANNNNTTC	1 cut(s)	249
PfeI	GAWTC	2 cut(s)	11, 250
Psp1406I	AACGTT	1 cut(s)	108
Psp6I	CCWGG	2 cut(s)	232, 269
PspGI	CCWGG	2 cut(s)	232, 269
PspN4I	GGNNCC	1 cut(s)	330
PspPI	GGNCC	1 cut(s)	73
RsaI	GTAC	2 cut(s)	164, 344
RsaNI	GTAC	2 cut(s)	163, 343
RseI	CAYNNNNRTG	1 cut(s)	205
SaqAI	TTAA	1 cut(s)	508
Sau96I	GGNCC	1 cut(s)	73
ScaI	AGTACT	1 cut(s)	344
ScrFI	CCNGG	2 cut(s)	234, 271
SetI	ASST	8 cut(s)	58, 111, 275, 283, 306, 367, 429, 455
SexAI	ACCWGGT	1 cut(s)	269
SfaNI	GCATC	2 cut(s)	124, 367
SinI	GGWCC	1 cut(s)	73
SmiMI	CAYNNNNRTG	1 cut(s)	205
Sse9I	AATT	3 cut(s)	284, 401, 464
SseBI	AGGCCT	1 cut(s)	500
SsiI	CCGC	1 cut(s)	5
StuI	AGGCCT	1 cut(s)	500
StyD4I	CCNGG	2 cut(s)	232, 269
TaaI	ACNGT	3 cut(s)	40, 262, 317
TaiI	ACGT	1 cut(s)	111
TaqI	TCGA	1 cut(s)	468
TasI	AATT	3 cut(s)	284, 401, 464
TatI	WGTACW	1 cut(s)	342
TfiI	GAWTC	2 cut(s)	11, 250
Tru1I	TTAA	1 cut(s)	508
Tru9I	TTAA	1 cut(s)	508
TspDTI	ATGAA	2 cut(s)	24, 258
TspGWI	ACGGA	1 cut(s)	146
VpaK11BI	GGWCC	1 cut(s)	73
XapI	RAATTY	2 cut(s)	284, 401
XmnI	GAANNNNTTC	1 cut(s)	249
ZrmI	AGTACT	1 cut(s)	344

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.