Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003502

Physical Location & Seq

Genomic Coordinates Reverse (-)

18008482 .. 18010614

Gene Structure 2133 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G43350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 621 bp

ATGCCTAGATCAAGCAGATGGGTCAATCAGCGAGCTACCTCTAAGATTAAAAAATTTATACTCTTTTTGGGTGTAGCCTTTGTCTTCTACCTCTACAGATACCCTTCTTCGCCATCGACGGTGGAACAATCATCCACTTCCATCTACAACATTTCCGTTAAGGATATTGAAGGGAAAGATGTGAGTTTGAGCAAGTTTACCGGGAAAGTGCTTCTTATAGTCAATGTAGCCTCTAAGTGTGGTCTAACACATGGAAACTACAAAGAAATGAACATTCTGTATGCCAAGTACAAAACTCAGGGGTTTGAGATCTTAGCATTTCCTTGCAACCAATTTGGTAGTCAAGAGCCAGGCAGCAACATGGAGATCAAGGAAACCGTTTGCAATATCTTCAAAGCAGAATTCCCAATCTTTGACAAGATTGAAGTAAATGGAAAGAACACTTGTCCCCTTTACAATTTCTTAAAAGAACAAAAAGGAGGATTGTTTGGGGATGCTATTAAGTGGAATTTCGCAAAGTTTCTGGTAGACAGACAAGGAAATGTCGTTGACCGATATGCTCCAACTACATCACCTCTTGAAATTGAGAAGGATATCGTCAAGCTATTGGCATCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005768 GO:0005783 GO:0005794 GO:0005802 GO:0005829 GO:0005886 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0012505 GO:0016020 GO:0023052 GO:0031410 GO:0031668 GO:0031982 GO:0031984 GO:0032870 GO:0033554 GO:0033993 GO:0042221 GO:0042493 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046677 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071944 GO:0097305 GO:0097306 GO:0097708 GO:0098791 GO:0104004 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00480 ko00590 ko04918 map00480 map00590 map04918

Pfam Domains

Protein Families

GSHPx

Protein Analysis

206

Amino Acids

23.26

Weight (kDa)

9.24

Isoelectric Point (pI)

45.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GSHPx	PF00255	48 - 156	4.6e-42	Glutathione peroxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003502)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31570 AT2G43350 AT2G43350
fragaria_vesca	FvH4_6g25700
malus_domestica	MD04G1034400.v1.1 MD14G1027000.v1.1
prunus_persica	Prupe.1G186500_v2.0.a1 Prupe.1G186500_v2.0.a1
pyrus_communis	pycom14g02570
rosa_chinensis	RchiOBHm_Chr4g0400261 RchiOBHm_Chr4g0408201
rosa_laevigata	RLG00000008663 RLG00000015280
rosa_multiflora	Rmu_sc0001793.1_g000052 Rmu_sc0005466.1_g000001 Rmu_sc0007120.1_g000003
rosa_roxburghii	Rroxscaffold_1G00024180 Rroxscaffold_1G00051140 Rroxscaffold_4G00316840 Rroxscaffold_5G00352710 Rroxscaffold_5G00361080
rosa_rugosa	Rorug04G0084100 Rorug04G0184800
rosa_samantha	Rh1CG015500 Rh2AG152400 Rh2BG157900 Rh3BG160500 Rh4AG149100 Rh4BG145700 Rh4CG156100 Rh4DG142100 Rh5BG054800
rosa_wichuraiana	Rw1G001130 Rw3G028070 Rw4G012170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	528
AcsI	RAATTY	3 cut(s)	53, 401, 508
AfaI	GTAC	1 cut(s)	290
AgsI	TTSAA	4 cut(s)	170, 394, 425, 581
AjnI	CCWGG	1 cut(s)	349
AluBI	AGCT	2 cut(s)	35, 604
AluI	AGCT	2 cut(s)	35, 604
ApeKI	GCWGC	1 cut(s)	354
ApoI	RAATTY	3 cut(s)	53, 401, 508
AsuC2I	CCSGG	1 cut(s)	202
AsuHPI	GGTGA	1 cut(s)	564
BbsI	GAAGAC	1 cut(s)	76
BbvI	GCAGC	1 cut(s)	366
BccI	CCATC	3 cut(s)	12, 121, 149
BciT130I	CCWGG	1 cut(s)	351
BcnI	CCSGG	1 cut(s)	202
BfaI	CTAG	1 cut(s)	6
BfmI	CTRYAG	1 cut(s)	94
BglII	AGATCT	1 cut(s)	309
BisI	GCNGC	1 cut(s)	355
BlsI	GCNGC	1 cut(s)	356
Bme1390I	CCNGG	2 cut(s)	202, 351
BmrFI	CCNGG	2 cut(s)	202, 351
BmsI	GCATC	1 cut(s)	484
BpiI	GAAGAC	1 cut(s)	76
BpuMI	CCSGG	1 cut(s)	202
BseBI	CCWGG	1 cut(s)	351
BseGI	GGATG	2 cut(s)	131, 499
BseMII	CTCAG	1 cut(s)	311
BseXI	GCAGC	1 cut(s)	366
BsiSI	CCGG	1 cut(s)	201
BslFI	GGGAC	1 cut(s)	432
BsmFI	GGGAC	1 cut(s)	432
Bsp143I	GATC	3 cut(s)	8, 309, 366
BspCNI	CTCAG	1 cut(s)	310
BssMI	GATC	3 cut(s)	8, 309, 366
Bst2UI	CCWGG	1 cut(s)	351
Bst4CI	ACNGT	2 cut(s)	121, 379
BstC8I	GCNNGC	1 cut(s)	33
BstDEI	CTNAG	4 cut(s)	42, 234, 297, 313
BstF5I	GGATG	2 cut(s)	131, 499
BstKTI	GATC	3 cut(s)	11, 312, 369
BstMBI	GATC	3 cut(s)	8, 309, 366
BstNI	CCWGG	1 cut(s)	351
BstSCI	CCNGG	2 cut(s)	200, 349
BstSFI	CTRYAG	1 cut(s)	94
BstV1I	GCAGC	1 cut(s)	366
BstV2I	GAAGAC	1 cut(s)	76
BstX2I	RGATCY	1 cut(s)	309
BstYI	RGATCY	1 cut(s)	309
BtsCI	GGATG	2 cut(s)	131, 499
Cac8I	GCNNGC	1 cut(s)	33
Csp6I	GTAC	1 cut(s)	289
CviAII	CATG	2 cut(s)	251, 361
CviJI	RGCY	5 cut(s)	35, 77, 230, 349, 604
CviKI_1	RGCY	5 cut(s)	35, 77, 230, 349, 604
CviQI	GTAC	1 cut(s)	289
DdeI	CTNAG	4 cut(s)	42, 234, 297, 313
DpnI	GATC	3 cut(s)	10, 311, 368
DpnII	GATC	3 cut(s)	8, 309, 366
Eco32I	GATATC	1 cut(s)	595
EcoRI	GAATTC	1 cut(s)	401
EcoRII	CCWGG	1 cut(s)	349
EcoRV	GATATC	1 cut(s)	595
FaeI	CATG	2 cut(s)	254, 364
FaiI	YATR	6 cut(s)	59, 218, 252, 282, 362, 558
FalI	AAGNNNNNCTT	2 cut(s)	198, 230
FaqI	GGGAC	1 cut(s)	432
FatI	CATG	2 cut(s)	250, 360
FblI	GTMKAC	1 cut(s)	528
Fnu4HI	GCNGC	1 cut(s)	355
FokI	GGATG	2 cut(s)	118, 506
Fsp4HI	GCNGC	1 cut(s)	355
FspBI	CTAG	1 cut(s)	6
GluI	GCNGC	1 cut(s)	355
HapII	CCGG	1 cut(s)	201
Hin1II	CATG	2 cut(s)	254, 364
HincII	GTYRAC	1 cut(s)	550
HindII	GTYRAC	1 cut(s)	550
HpaII	CCGG	1 cut(s)	201
HphI	GGTGA	1 cut(s)	564
Hpy166II	GTNNAC	3 cut(s)	198, 529, 550
Hpy188III	TCNNGA	2 cut(s)	344, 578
Hpy8I	GTNNAC	3 cut(s)	198, 529, 550
Hpy99I	CGWCG	1 cut(s)	121
HpyAV	CCTTC	3 cut(s)	114, 164, 583
HpyCH4III	ACNGT	2 cut(s)	121, 379
HpyCH4V	TGCA	2 cut(s)	327, 384
HpyF3I	CTNAG	4 cut(s)	42, 234, 297, 313
Hsp92II	CATG	2 cut(s)	254, 364
Kzo9I	GATC	3 cut(s)	8, 309, 366
LmnI	GCTCC	1 cut(s)	565
LpnPI	CCDG	5 cut(s)	214, 284, 336, 363, 509
Lsp1109I	GCAGC	1 cut(s)	366
LweI	GCATC	1 cut(s)	484
MaeI	CTAG	1 cut(s)	6
MalI	GATC	3 cut(s)	10, 311, 368
MboI	GATC	3 cut(s)	8, 309, 366
MboII	GAAGA	3 cut(s)	76, 99, 382
MflI	RGATCY	1 cut(s)	309
MluCI	AATT	6 cut(s)	53, 332, 401, 457, 508, 582
MmeI	TCCRAC	1 cut(s)	587
MnlI	CCTC	5 cut(s)	49, 101, 241, 473, 585
MseI	TTAA	4 cut(s)	48, 159, 464, 501
MspI	CCGG	1 cut(s)	201
MspR9I	CCNGG	2 cut(s)	202, 351
MvaI	CCWGG	1 cut(s)	351
NciI	CCSGG	1 cut(s)	202
NdeII	GATC	3 cut(s)	8, 309, 366
NlaIII	CATG	2 cut(s)	254, 364
PkrI	GCNGC	1 cut(s)	356
Psp6I	CCWGG	1 cut(s)	349
PspGI	CCWGG	1 cut(s)	349
PsuI	RGATCY	1 cut(s)	309
RsaI	GTAC	1 cut(s)	290
RsaNI	GTAC	1 cut(s)	289
SaqAI	TTAA	4 cut(s)	48, 159, 464, 501
SatI	GCNGC	1 cut(s)	355
Sau3AI	GATC	3 cut(s)	8, 309, 366
ScrFI	CCNGG	2 cut(s)	202, 351
SetI	ASST	5 cut(s)	37, 41, 93, 577, 606
SfaNI	GCATC	1 cut(s)	484
SfcI	CTRYAG	1 cut(s)	94
Sse9I	AATT	6 cut(s)	53, 332, 401, 457, 508, 582
SspMI	CTAG	1 cut(s)	6
StyD4I	CCNGG	2 cut(s)	200, 349
TaaI	ACNGT	2 cut(s)	121, 379
TaqI	TCGA	1 cut(s)	116
TaqII	GACCGA	1 cut(s)	567
TasI	AATT	6 cut(s)	53, 332, 401, 457, 508, 582
TatI	WGTACW	1 cut(s)	288
Tru1I	TTAA	4 cut(s)	48, 159, 464, 501
Tru9I	TTAA	4 cut(s)	48, 159, 464, 501
TseI	GCWGC	1 cut(s)	354
TspDTI	ATGAA	1 cut(s)	284
TspGWI	ACGGA	1 cut(s)	145
XapI	RAATTY	3 cut(s)	53, 401, 508
XmiI	GTMKAC	1 cut(s)	528
XspI	CTAG	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.