Rh3BG160500

Belongs to the glutathione peroxidase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Forward (+)
13854465 .. 13856283
1819 bp
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UTR
Exon/CDS
Intron
Rh3BG160500.1

Sequence Viewer

Length: 300 bp
ATGGCCCACGGAAAAGTCAGTCTCGCTCAAGAACTCCTCCCCTCGCCGATCTTCTCCGCCACCAAAGACTCGGAGTTGGCACAGAGGGAAGAGTTCGAGATGAGCATTGCAGGATCTGGAGAGGTGGAGCCATCGATCAGTCTTAAAATTGGAGAAGGTGGTCTCTTTGGAAATGGCATCAAATGGAACTTTACCAAGTTTTTGGTAAACAAAGAAGGGAAGGTTGTGGAGAGATATGCTCCCGTGACAGCACCTCTCAAAATTGAGAAAGACATCCAGAATCTATTGGAATCTTCTTGA

Protein Analysis

99

Amino Acids

10.78

Weight (kDa)

5.16

Isoelectric Point (pI)

40.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 57
AclWI GGATC 1 cut(s) 121
Alw26I GTCTC 2 cut(s) 26, 167
AlwI GGATC 1 cut(s) 121
AlwNI CAGNNNCTG 1 cut(s) 116
AoxI GGCC 1 cut(s) 3
AspS9I GGNCC 1 cut(s) 4
BccI CCATC 1 cut(s) 139
BcoDI GTCTC 2 cut(s) 26, 167
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 1 cut(s) 129
BmsI GCATC 1 cut(s) 186
BplI GAGNNNNNCTC 2 cut(s) 223, 255
BpmI CTGGAG 1 cut(s) 138
BpuEI CTTGAG 1 cut(s) 12
Bsa29I ATCGAT 1 cut(s) 134
BsaI GGTCTC 1 cut(s) 167
BsaJI CCNNGG 1 cut(s) 7
Bse3DI GCAATG 1 cut(s) 105
BseCI ATCGAT 1 cut(s) 134
BseDI CCNNGG 1 cut(s) 7
BseGI GGATG 1 cut(s) 273
BseMI GCAATG 1 cut(s) 105
BseRI GAGGAG 1 cut(s) 26
BshFI GGCC 1 cut(s) 5
BshVI ATCGAT 1 cut(s) 134
BsmAI GTCTC 2 cut(s) 26, 167
BsnI GGCC 1 cut(s) 5
Bso31I GGTCTC 1 cut(s) 167
Bsp143I GATC 3 cut(s) 48, 113, 135
BspACI CCGC 1 cut(s) 57
BspANI GGCC 1 cut(s) 5
BspDI ATCGAT 1 cut(s) 134
BspLI GGNNCC 1 cut(s) 129
BspPI GGATC 1 cut(s) 121
BspTNI GGTCTC 1 cut(s) 167
BsrDI GCAATG 1 cut(s) 105
BssECI CCNNGG 1 cut(s) 7
BssMI GATC 3 cut(s) 48, 113, 135
Bst6I CTCTTC 1 cut(s) 84
BstDSI CCRYGG 1 cut(s) 7
BstF5I GGATG 1 cut(s) 273
BstKTI GATC 3 cut(s) 51, 116, 138
BstMAI GTCTC 2 cut(s) 26, 167
BstMBI GATC 3 cut(s) 48, 113, 135
BstX2I RGATCY 1 cut(s) 113
BstXI CCANNNNNNTGG 1 cut(s) 202
BstYI RGATCY 1 cut(s) 113
Bsu15I ATCGAT 1 cut(s) 134
BsuRI GGCC 1 cut(s) 5
BsuTUI ATCGAT 1 cut(s) 134
BtgI CCRYGG 1 cut(s) 7
BtsCI GGATG 1 cut(s) 273
CaiI CAGNNNCTG 1 cut(s) 116
Cfr13I GGNCC 1 cut(s) 4
ClaI ATCGAT 1 cut(s) 134
CviJI RGCY 2 cut(s) 5, 130
CviKI_1 RGCY 2 cut(s) 5, 130
DpnI GATC 3 cut(s) 50, 115, 137
DpnII GATC 3 cut(s) 48, 113, 135
Eam1104I CTCTTC 1 cut(s) 84
EarI CTCTTC 1 cut(s) 84
EciI GGCGGA 1 cut(s) 46
Eco31I GGTCTC 1 cut(s) 167
FaiI YATR 1 cut(s) 237
FokI GGATG 1 cut(s) 260
GsuI CTGGAG 1 cut(s) 138
HaeIII GGCC 1 cut(s) 5
HinfI GANTC 3 cut(s) 68, 280, 290
Hpy166II GTNNAC 1 cut(s) 208
Hpy188I TCNGA 1 cut(s) 73
Hpy188III TCNNGA 5 cut(s) 29, 97, 117, 277, 297
Hpy8I GTNNAC 1 cut(s) 208
HpyAV CCTTC 3 cut(s) 149, 209, 214
HpyCH4V TGCA 1 cut(s) 110
Kzo9I GATC 3 cut(s) 48, 113, 135
LmnI GCTCC 2 cut(s) 127, 244
LpnPI CCDG 3 cut(s) 96, 102, 290
LweI GCATC 1 cut(s) 186
MaeIII GTNAC 1 cut(s) 244
MalI GATC 3 cut(s) 50, 115, 137
MboI GATC 3 cut(s) 48, 113, 135
MboII GAAGA 3 cut(s) 43, 101, 285
MflI RGATCY 1 cut(s) 113
MluCI AATT 2 cut(s) 147, 261
MlyI GAGTC 1 cut(s) 62
MnlI CCTC 5 cut(s) 47, 52, 78, 115, 264
MseI TTAA 1 cut(s) 144
NdeII GATC 3 cut(s) 48, 113, 135
NlaIV GGNNCC 1 cut(s) 129
NmuCI GTSAC 1 cut(s) 244
PfeI GAWTC 2 cut(s) 280, 290
PleI GAGTC 1 cut(s) 62
PpsI GAGTC 1 cut(s) 62
PspN4I GGNNCC 1 cut(s) 129
PspPI GGNCC 1 cut(s) 4
PstNI CAGNNNCTG 1 cut(s) 116
PsuI RGATCY 1 cut(s) 113
SaqAI TTAA 1 cut(s) 144
Sau3AI GATC 3 cut(s) 48, 113, 135
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 1 cut(s) 62
SetI ASST 4 cut(s) 126, 160, 225, 256
SfaNI GCATC 1 cut(s) 186
SmlI CTYRAG 1 cut(s) 27
SmoI CTYRAG 1 cut(s) 27
Sse9I AATT 2 cut(s) 147, 261
SsiI CCGC 1 cut(s) 57
TaqI TCGA 2 cut(s) 96, 134
TasI AATT 2 cut(s) 147, 261
TfiI GAWTC 2 cut(s) 280, 290
Tru1I TTAA 1 cut(s) 144
Tru9I TTAA 1 cut(s) 144
TseFI GTSAC 1 cut(s) 244
Tsp45I GTSAC 1 cut(s) 244
TspGWI ACGGA 1 cut(s) 24
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.