Rh1CG015500

Belongs to the glutathione peroxidase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
2480126 .. 2482537
2412 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG015500.1

Sequence Viewer

Length: 381 bp
ATGGATTTGGGAGCAAATGCTGGAGTGGAGGCCAAAGATTTCATCAAGGTCAAGGATATGGCATTCAAGGCCTCGGGACCCTACAAAAACTGCAAGCCGTGTTCGAGGCTGTGTGGCGACCATCAGAACGGGAACTTTTTGCAATACAAGGAAGAGATTGGGTACTTCCAAAAGTCTGATCTTAGCGATGATATGAAGAATGAGGCTCCCCTTTACATGGTCTTAAAATTGGAGAAAGGTGGTCTCTTTGGAAATGGCATCAAATGGAACTTTACCAAGTTTTTGGTAAACAAAGAAGGGAAGGTTGTGGAGAGATATGCTCCCGTGACAGCACCTCTCAAAATTGAGAAAGACATCCAAAATCTATTGGAATCTGCTTGA

Protein Analysis

126

Amino Acids

14.14

Weight (kDa)

8.36

Isoelectric Point (pI)

19.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 164
AfiI CCNNNNNNNGG 1 cut(s) 217
AgsI TTSAA 1 cut(s) 67
Alw26I GTCTC 1 cut(s) 248
Ama87I CYCGRG 1 cut(s) 73
AoxI GGCC 2 cut(s) 30, 69
AspS9I GGNCC 1 cut(s) 77
AvaI CYCGRG 1 cut(s) 73
AvaII GGWCC 1 cut(s) 77
BccI CCATC 1 cut(s) 129
BceAI ACGGC 1 cut(s) 82
BcoDI GTCTC 1 cut(s) 248
Bme18I GGWCC 1 cut(s) 77
BmeT110I CYCGRG 1 cut(s) 73
BmgT120I GGNCC 1 cut(s) 77
BmiI GGNNCC 3 cut(s) 78, 79, 207
BmsI GCATC 1 cut(s) 267
BplI GAGNNNNNCTC 2 cut(s) 304, 336
BpmI CTGGAG 1 cut(s) 42
BsaI GGTCTC 1 cut(s) 248
BsaJI CCNNGG 1 cut(s) 72
Bsc4I CCNNNNNNNGG 1 cut(s) 217
BseDI CCNNGG 1 cut(s) 72
BseGI GGATG 1 cut(s) 354
BseLI CCNNNNNNNGG 1 cut(s) 217
BshFI GGCC 2 cut(s) 32, 71
BsiHKCI CYCGRG 1 cut(s) 73
BslFI GGGAC 1 cut(s) 90
BslI CCNNNNNNNGG 1 cut(s) 217
BsmAI GTCTC 1 cut(s) 248
BsmFI GGGAC 1 cut(s) 90
BsmI GAATGC 1 cut(s) 62
BsnI GGCC 2 cut(s) 32, 71
Bso31I GGTCTC 1 cut(s) 248
BsoBI CYCGRG 1 cut(s) 73
Bsp143I GATC 1 cut(s) 178
BspANI GGCC 2 cut(s) 32, 71
BspLI GGNNCC 3 cut(s) 78, 79, 207
BspTNI GGTCTC 1 cut(s) 248
BssECI CCNNGG 1 cut(s) 72
BssMI GATC 1 cut(s) 178
Bst6I CTCTTC 1 cut(s) 147
BstC8I GCNNGC 1 cut(s) 95
BstDEI CTNAG 1 cut(s) 182
BstF5I GGATG 1 cut(s) 354
BstKTI GATC 1 cut(s) 181
BstMAI GTCTC 1 cut(s) 248
BstMBI GATC 1 cut(s) 178
BstMWI GCNNNNNNNGC 1 cut(s) 68
BstXI CCANNNNNNTGG 1 cut(s) 283
BsuRI GGCC 2 cut(s) 32, 71
BtgZI GCGATG 1 cut(s) 201
BtsCI GGATG 1 cut(s) 354
Cac8I GCNNGC 1 cut(s) 95
Cfr13I GGNCC 1 cut(s) 77
Csp6I GTAC 1 cut(s) 163
CviAII CATG 1 cut(s) 217
CviJI RGCY 5 cut(s) 32, 71, 97, 109, 206
CviKI_1 RGCY 5 cut(s) 32, 71, 97, 109, 206
CviQI GTAC 1 cut(s) 163
DdeI CTNAG 1 cut(s) 182
DpnI GATC 1 cut(s) 180
DpnII GATC 1 cut(s) 178
Eam1104I CTCTTC 1 cut(s) 147
EarI CTCTTC 1 cut(s) 147
Eco147I AGGCCT 1 cut(s) 71
Eco31I GGTCTC 1 cut(s) 248
Eco47I GGWCC 1 cut(s) 77
Eco88I CYCGRG 1 cut(s) 73
EcoO109I RGGNCCY 1 cut(s) 77
FaeI CATG 1 cut(s) 220
FaiI YATR 4 cut(s) 59, 194, 218, 318
FaqI GGGAC 1 cut(s) 90
FatI CATG 1 cut(s) 216
FokI GGATG 1 cut(s) 341
GsuI CTGGAG 1 cut(s) 42
HaeIII GGCC 2 cut(s) 32, 71
Hin1II CATG 1 cut(s) 220
HinfI GANTC 1 cut(s) 371
Hpy166II GTNNAC 1 cut(s) 289
Hpy188I TCNGA 2 cut(s) 126, 178
Hpy188III TCNNGA 1 cut(s) 75
Hpy8I GTNNAC 1 cut(s) 289
HpyAV CCTTC 2 cut(s) 290, 295
HpyCH4V TGCA 2 cut(s) 93, 142
HpyF10VI GCNNNNNNNGC 1 cut(s) 68
HpyF3I CTNAG 1 cut(s) 182
Hsp92II CATG 1 cut(s) 220
KflI GGGWCCC 1 cut(s) 77
Kzo9I GATC 1 cut(s) 178
LmnI GCTCC 3 cut(s) 11, 211, 325
LpnPI CCDG 1 cut(s) 6
LweI GCATC 1 cut(s) 267
MaeIII GTNAC 1 cut(s) 325
MalI GATC 1 cut(s) 180
MboI GATC 1 cut(s) 178
MboII GAAGA 2 cut(s) 164, 208
MluCI AATT 2 cut(s) 227, 342
MnlI CCTC 5 cut(s) 22, 82, 99, 196, 345
MseI TTAA 1 cut(s) 224
Mva1269I GAATGC 1 cut(s) 62
MwoI GCNNNNNNNGC 1 cut(s) 68
NdeII GATC 1 cut(s) 178
NlaIII CATG 1 cut(s) 220
NlaIV GGNNCC 3 cut(s) 78, 79, 207
NmuCI GTSAC 1 cut(s) 325
PceI AGGCCT 1 cut(s) 71
PctI GAATGC 1 cut(s) 62
PfeI GAWTC 1 cut(s) 371
PpuMI RGGWCCY 1 cut(s) 77
Psp5II RGGWCCY 1 cut(s) 77
PspN4I GGNNCC 3 cut(s) 78, 79, 207
PspPI GGNCC 1 cut(s) 77
PspPPI RGGWCCY 1 cut(s) 77
RsaI GTAC 1 cut(s) 164
RsaNI GTAC 1 cut(s) 163
SaqAI TTAA 1 cut(s) 224
Sau3AI GATC 1 cut(s) 178
Sau96I GGNCC 1 cut(s) 77
SetI ASST 4 cut(s) 51, 241, 306, 337
SfaNI GCATC 1 cut(s) 267
SinI GGWCC 1 cut(s) 77
Sse9I AATT 2 cut(s) 227, 342
SseBI AGGCCT 1 cut(s) 71
StuI AGGCCT 1 cut(s) 71
TaqI TCGA 1 cut(s) 104
TasI AATT 2 cut(s) 227, 342
TfiI GAWTC 1 cut(s) 371
Tru1I TTAA 1 cut(s) 224
Tru9I TTAA 1 cut(s) 224
TseFI GTSAC 1 cut(s) 325
Tsp45I GTSAC 1 cut(s) 325
TspDTI ATGAA 2 cut(s) 31, 209
VpaK11BI GGWCC 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.