FvH4_6g25700

glutathione peroxidase activity

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
19680091 .. 19680673
583 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g25700.t1

Sequence Viewer

Length: 366 bp
ATGAACAGCTTTCAAAATGTTAGTATTTTTGAGGATAGATATGATGTGATCAAGTTCATCAAGCTGGCACAGCAACATGGCTTATATATTCATCTCCATATTGGTCCTTATAACAGGTTAAGGCTGCAAAATGTGCACAGAAGCGTGTTGAATATACACATTAAAATCGAGGTGAATGGGAAGAATGAGGCTCCTCTTTATAAGTTCTTAAAATTGGAGAAAGGTGGGCTCTTTGGAAATGGCATCAAATGGAACTTTACCAAGTTTTTGGTGAACAAAGAAGGGAAGGTTGTTGAAAGATATGCTCTTGTGACAGCACCTCTCAAAATTGAGAAAGACATCCAGAATCTGTTGGAATCTTCTTAA

Protein Analysis

122

Amino Acids

14.09

Weight (kDa)

9.7

Isoelectric Point (pI)

37.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 111, 201
AgsI TTSAA 3 cut(s) 14, 151, 296
AluBI AGCT 2 cut(s) 9, 64
AluI AGCT 2 cut(s) 9, 64
Alw21I GWGCWC 1 cut(s) 138
Alw44I GTGCAC 1 cut(s) 134
AlwNI CAGNNNCTG 1 cut(s) 349
ApaLI GTGCAC 1 cut(s) 134
ApeKI GCWGC 1 cut(s) 124
AspS9I GGNCC 1 cut(s) 104
AsuHPI GGTGA 2 cut(s) 184, 283
AvaII GGWCC 1 cut(s) 104
BaeGI GKGCMC 1 cut(s) 138
BanII GRGCYC 1 cut(s) 231
Bbv12I GWGCWC 1 cut(s) 138
BbvI GCAGC 1 cut(s) 111
BclI TGATCA 1 cut(s) 48
BisI GCNGC 1 cut(s) 125
BlsI GCNGC 1 cut(s) 126
Bme18I GGWCC 1 cut(s) 104
BmgT120I GGNCC 1 cut(s) 104
BmiI GGNNCC 1 cut(s) 192
BmsI GCATC 1 cut(s) 252
BseGI GGATG 1 cut(s) 339
BseRI GAGGAG 1 cut(s) 183
BseSI GKGCMC 1 cut(s) 138
BseXI GCAGC 1 cut(s) 111
BsiHKAI GWGCWC 1 cut(s) 138
Bsp1286I GDGCHC 2 cut(s) 138, 231
Bsp143I GATC 1 cut(s) 48
BspLI GGNNCC 1 cut(s) 192
BssMI GATC 1 cut(s) 48
BstAPI GCANNNNNTGC 1 cut(s) 133
BstC8I GCNNGC 1 cut(s) 66
BstF5I GGATG 1 cut(s) 339
BstKTI GATC 1 cut(s) 51
BstMBI GATC 1 cut(s) 48
BstMWI GCNNNNNNNGC 2 cut(s) 70, 133
BstSLI GKGCMC 1 cut(s) 138
BstV1I GCAGC 1 cut(s) 111
BstXI CCANNNNNNTGG 1 cut(s) 268
BtsCI GGATG 1 cut(s) 339
Cac8I GCNNGC 1 cut(s) 66
CaiI CAGNNNCTG 1 cut(s) 349
Cfr13I GGNCC 1 cut(s) 104
CviAII CATG 1 cut(s) 77
CviJI RGCY 6 cut(s) 9, 64, 81, 124, 191, 229
CviKI_1 RGCY 6 cut(s) 9, 64, 81, 124, 191, 229
DpnI GATC 1 cut(s) 50
DpnII GATC 1 cut(s) 48
Eco24I GRGCYC 1 cut(s) 231
Eco47I GGWCC 1 cut(s) 104
EcoT38I GRGCYC 1 cut(s) 231
FaeI CATG 1 cut(s) 80
FaiI YATR 9 cut(s) 42, 78, 85, 87, 99, 111, 155, 201, 303
FatI CATG 1 cut(s) 76
FbaI TGATCA 1 cut(s) 48
Fnu4HI GCNGC 1 cut(s) 125
FokI GGATG 1 cut(s) 326
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 1 cut(s) 125
GluI GCNGC 1 cut(s) 125
Hin1II CATG 1 cut(s) 80
HinfI GANTC 2 cut(s) 346, 356
HphI GGTGA 2 cut(s) 184, 283
Hpy166II GTNNAC 2 cut(s) 136, 274
Hpy188III TCNNGA 1 cut(s) 343
Hpy8I GTNNAC 2 cut(s) 136, 274
HpyAV CCTTC 2 cut(s) 275, 280
HpyCH4V TGCA 2 cut(s) 127, 136
HpyF10VI GCNNNNNNNGC 2 cut(s) 70, 133
Hsp92II CATG 1 cut(s) 80
Ksp22I TGATCA 1 cut(s) 48
Kzo9I GATC 1 cut(s) 48
LmnI GCTCC 1 cut(s) 196
LpnPI CCDG 3 cut(s) 50, 100, 356
Lsp1109I GCAGC 1 cut(s) 111
LweI GCATC 1 cut(s) 252
MaeIII GTNAC 1 cut(s) 310
MalI GATC 1 cut(s) 50
MboI GATC 1 cut(s) 48
MboII GAAGA 2 cut(s) 193, 351
MhlI GDGCHC 2 cut(s) 138, 231
MluCI AATT 2 cut(s) 212, 327
MmeI TCCRAC 1 cut(s) 333
MnlI CCTC 5 cut(s) 25, 163, 181, 204, 330
MseI TTAA 4 cut(s) 119, 162, 209, 364
MwoI GCNNNNNNNGC 2 cut(s) 70, 133
NdeII GATC 1 cut(s) 48
NlaIII CATG 1 cut(s) 80
NlaIV GGNNCC 1 cut(s) 192
NmuCI GTSAC 1 cut(s) 310
PfeI GAWTC 2 cut(s) 346, 356
PkrI GCNGC 1 cut(s) 126
PsiI TTATAA 2 cut(s) 111, 201
PspN4I GGNNCC 1 cut(s) 192
PspPI GGNCC 1 cut(s) 104
PstNI CAGNNNCTG 1 cut(s) 349
SaqAI TTAA 4 cut(s) 119, 162, 209, 364
SatI GCNGC 1 cut(s) 125
Sau3AI GATC 1 cut(s) 48
Sau96I GGNCC 1 cut(s) 104
SduI GDGCHC 2 cut(s) 138, 231
SetI ASST 7 cut(s) 11, 66, 119, 174, 226, 291, 322
SfaNI GCATC 1 cut(s) 252
SinI GGWCC 1 cut(s) 104
Sse9I AATT 2 cut(s) 212, 327
TaqI TCGA 1 cut(s) 168
TasI AATT 2 cut(s) 212, 327
TfiI GAWTC 2 cut(s) 346, 356
Tru1I TTAA 4 cut(s) 119, 162, 209, 364
Tru9I TTAA 4 cut(s) 119, 162, 209, 364
TseFI GTSAC 1 cut(s) 310
TseI GCWGC 1 cut(s) 124
Tsp45I GTSAC 1 cut(s) 310
TspDTI ATGAA 3 cut(s) 17, 46, 80
VneI GTGCAC 1 cut(s) 134
VpaK11BI GGWCC 1 cut(s) 104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.