Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003502

Physical Location & Seq

Genomic Coordinates Reverse (-)

16947449 .. 16951179

Gene Structure 3731 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G186500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 633 bp

ATGCTACTCCTTTCGGTGATGGGCGTGGGAATGCATTTGTTGAAATTCACCAACTGGGTCTCTCTCTTCGTTCTGGGTTTTGCTTTCTTGTACTTCTATTACGCCTACCAGTTCTCTTCTTCCCAAATTATGGCTGAAGGAAGTTCCAAATCAATATACGATTTCACAGTCAAGGATATTCATGGTAACGATGTAAAGCTGAGTGAATACGGTGGGAAGGTTCTCCTGATTGTAAATGTTGCTTCCCAATGTGGTTTAACACAATCCAACTACAAGGAATTAAGTGTTTTGTATGAAAAGTACAAAAACAAAGGTTTTGAGATCTTGGCATTTCCTTGCAACCAGTTTGGAGGACAAGAGCCAGGAAACAATGAGGAGATTCAAGAAGTTGCATGCACGAGGTTTAAAGCTGAATTCCCAATCTTTGACAAGATTGAGGTGAATGGGAAGAATGAGGCGCCCCTTTACAAATTCCTGAAATTACAGAAAGGTGGGCTCTTTGGAAATGGCATCAAATGGAACTTTACCAAGTTTTTGGTTAACAAAGAAGGAAAAGTTGTGGAGAGATATGCTCCTGTGACATCACCTCTTAAAATTGAGAAAGACATCCAGAGTCTGTTGGAATCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00480 ko00590 ko04918 map00480 map00590 map04918

Pfam Domains

Protein Families

GSHPx

Protein Analysis

211

Amino Acids

23.76

Weight (kDa)

8.27

Isoelectric Point (pI)

41.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003502)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31570 AT2G43350 AT2G43350
fragaria_vesca	FvH4_6g25700
malus_domestica	MD04G1034400.v1.1 MD14G1027000.v1.1
prunus_persica	Prupe.1G186500_v2.0.a1 Prupe.1G186500_v2.0.a1
pyrus_communis	pycom14g02570
rosa_chinensis	RchiOBHm_Chr4g0400261 RchiOBHm_Chr4g0408201
rosa_laevigata	RLG00000008663 RLG00000015280
rosa_multiflora	Rmu_sc0001793.1_g000052 Rmu_sc0005466.1_g000001 Rmu_sc0007120.1_g000003
rosa_roxburghii	Rroxscaffold_1G00024180 Rroxscaffold_1G00051140 Rroxscaffold_4G00316840 Rroxscaffold_5G00352710 Rroxscaffold_5G00361080
rosa_rugosa	Rorug04G0084100 Rorug04G0184800
rosa_samantha	Rh1CG015500 Rh2AG152400 Rh2BG157900 Rh3BG160500 Rh4AG149100 Rh4BG145700 Rh4CG156100 Rh4DG142100 Rh5BG054800
rosa_wichuraiana	Rw1G001130 Rw3G028070 Rw4G012170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	457
AccB7I	CCANNNNNTGG	1 cut(s)	130
AcsI	RAATTY	3 cut(s)	44, 413, 470
AcuI	CTGAAG	1 cut(s)	156
AcyI	GRCGYC	1 cut(s)	458
AfaI	GTAC	2 cut(s)	92, 302
AfiI	CCNNNNNNNGG	1 cut(s)	130
AgsI	TTSAA	2 cut(s)	43, 383
AjnI	CCWGG	1 cut(s)	361
AluBI	AGCT	2 cut(s)	199, 410
AluI	AGCT	2 cut(s)	199, 410
Alw26I	GTCTC	1 cut(s)	64
AlwNI	CAGNNNCTG	1 cut(s)	616
ApoI	RAATTY	3 cut(s)	44, 413, 470
AspLEI	GCGC	1 cut(s)	460
AsuHPI	GGTGA	4 cut(s)	28, 40, 451, 576
BanI	GGYRCC	1 cut(s)	457
BanII	GRGCYC	1 cut(s)	498
BauI	CACGAG	1 cut(s)	397
BccI	CCATC	1 cut(s)	13
BciT130I	CCWGG	1 cut(s)	363
BcoDI	GTCTC	1 cut(s)	64
BfoI	RGCGCY	1 cut(s)	461
BglII	AGATCT	1 cut(s)	321
Bme1390I	CCNGG	1 cut(s)	363
BmiI	GGNNCC	1 cut(s)	459
BmrFI	CCNGG	1 cut(s)	363
BmrI	ACTGGG	1 cut(s)	64
BmsI	GCATC	1 cut(s)	519
BmuI	ACTGGG	1 cut(s)	64
BplI	GAGNNNNNCTC	2 cut(s)	556, 588
BsaHI	GRCGYC	1 cut(s)	458
BsaI	GGTCTC	1 cut(s)	64
Bsc4I	CCNNNNNNNGG	1 cut(s)	130
Bse1I	ACTGG	3 cut(s)	59, 109, 343
BseBI	CCWGG	1 cut(s)	363
BseGI	GGATG	1 cut(s)	606
BseLI	CCNNNNNNNGG	1 cut(s)	130
BseMII	CTCAG	1 cut(s)	191
BseNI	ACTGG	3 cut(s)	59, 109, 343
BseRI	GAGGAG	1 cut(s)	389
BshNI	GGYRCC	1 cut(s)	457
BslI	CCNNNNNNNGG	1 cut(s)	130
BsmAI	GTCTC	1 cut(s)	64
BsmI	GAATGC	1 cut(s)	36
Bso31I	GGTCTC	1 cut(s)	64
Bsp1286I	GDGCHC	1 cut(s)	498
Bsp143I	GATC	1 cut(s)	321
BspCNI	CTCAG	1 cut(s)	192
BspLI	GGNNCC	1 cut(s)	459
BspT107I	GGYRCC	1 cut(s)	457
BspTNI	GGTCTC	1 cut(s)	64
BsrI	ACTGG	3 cut(s)	59, 109, 343
BssMI	GATC	1 cut(s)	321
BssNI	GRCGYC	1 cut(s)	458
BssSI	CACGAG	1 cut(s)	397
Bst2BI	CACGAG	1 cut(s)	397
Bst2UI	CCWGG	1 cut(s)	363
Bst4CI	ACNGT	2 cut(s)	169, 212
Bst6I	CTCTTC	2 cut(s)	71, 121
BstACI	GRCGYC	1 cut(s)	458
BstC8I	GCNNGC	1 cut(s)	394
BstDEI	CTNAG	1 cut(s)	200
BstF5I	GGATG	1 cut(s)	606
BstH2I	RGCGCY	1 cut(s)	461
BstHHI	GCGC	1 cut(s)	460
BstKTI	GATC	1 cut(s)	324
BstMAI	GTCTC	1 cut(s)	64
BstMBI	GATC	1 cut(s)	321
BstNI	CCWGG	1 cut(s)	363
BstNSI	RCATGY	1 cut(s)	396
BstSCI	CCNGG	1 cut(s)	361
BstX2I	RGATCY	1 cut(s)	321
BstXI	CCANNNNNNTGG	1 cut(s)	535
BstYI	RGATCY	1 cut(s)	321
BtsCI	GGATG	1 cut(s)	606
Cac8I	GCNNGC	1 cut(s)	394
CaiI	CAGNNNCTG	1 cut(s)	616
CfoI	GCGC	1 cut(s)	460
Csp6I	GTAC	2 cut(s)	91, 301
CviAII	CATG	2 cut(s)	182, 393
CviJI	RGCY	5 cut(s)	134, 199, 361, 410, 496
CviKI_1	RGCY	5 cut(s)	134, 199, 361, 410, 496
CviQI	GTAC	2 cut(s)	91, 301
DdeI	CTNAG	1 cut(s)	200
DinI	GGCGCC	1 cut(s)	459
DpnI	GATC	1 cut(s)	323
DpnII	GATC	1 cut(s)	321
DraI	TTTAAA	1 cut(s)	406
Eam1104I	CTCTTC	2 cut(s)	71, 121
EarI	CTCTTC	2 cut(s)	71, 121
Eco24I	GRGCYC	1 cut(s)	498
Eco31I	GGTCTC	1 cut(s)	64
Eco57I	CTGAAG	1 cut(s)	156
EcoRI	GAATTC	1 cut(s)	413
EcoRII	CCWGG	1 cut(s)	361
EcoT22I	ATGCAT	1 cut(s)	36
EcoT38I	GRGCYC	1 cut(s)	498
EgeI	GGCGCC	1 cut(s)	459
EheI	GGCGCC	1 cut(s)	459
FaeI	CATG	2 cut(s)	185, 396
FaiI	YATR	6 cut(s)	131, 157, 183, 294, 394, 570
FatI	CATG	2 cut(s)	181, 392
FokI	GGATG	1 cut(s)	593
FriOI	GRGCYC	1 cut(s)	498
GlaI	GCGC	1 cut(s)	459
HaeII	RGCGCY	1 cut(s)	461
HhaI	GCGC	1 cut(s)	460
Hin1I	GRCGYC	1 cut(s)	458
Hin1II	CATG	2 cut(s)	185, 396
Hin6I	GCGC	1 cut(s)	458
HinP1I	GCGC	1 cut(s)	458
HincII	GTYRAC	1 cut(s)	541
HindII	GTYRAC	1 cut(s)	541
HinfI	GANTC	3 cut(s)	379, 613, 623
HpaI	GTTAAC	1 cut(s)	541
HphI	GGTGA	4 cut(s)	28, 40, 451, 576
Hpy166II	GTNNAC	1 cut(s)	541
Hpy188III	TCNNGA	5 cut(s)	226, 383, 475, 610, 630
Hpy8I	GTNNAC	1 cut(s)	541
HpyAV	CCTTC	3 cut(s)	131, 211, 542
HpyCH4III	ACNGT	2 cut(s)	169, 212
HpyCH4V	TGCA	4 cut(s)	34, 339, 392, 396
HpyF3I	CTNAG	1 cut(s)	200
Hsp92I	GRCGYC	1 cut(s)	458
Hsp92II	CATG	2 cut(s)	185, 396
HspAI	GCGC	1 cut(s)	458
KasI	GGCGCC	1 cut(s)	457
KspAI	GTTAAC	1 cut(s)	541
Kzo9I	GATC	1 cut(s)	321
LmnI	GCTCC	1 cut(s)	577
LweI	GCATC	1 cut(s)	519
MaeIII	GTNAC	2 cut(s)	185, 577
MalI	GATC	1 cut(s)	323
MboI	GATC	1 cut(s)	321
MboII	GAAGA	5 cut(s)	58, 108, 111, 460, 618
MflI	RGATCY	1 cut(s)	321
MhlI	GDGCHC	1 cut(s)	498
MluCI	AATT	7 cut(s)	44, 126, 278, 413, 470, 479, 594
Mly113I	GGCGCC	1 cut(s)	458
MlyI	GAGTC	1 cut(s)	622
MmeI	TCCRAC	2 cut(s)	291, 600
MnlI	CCTC	6 cut(s)	344, 367, 393, 430, 448, 597
Mph1103I	ATGCAT	1 cut(s)	36
MseI	TTAA	5 cut(s)	257, 281, 405, 540, 591
MspR9I	CCNGG	1 cut(s)	363
Mva1269I	GAATGC	1 cut(s)	36
MvaI	CCWGG	1 cut(s)	363
NarI	GGCGCC	1 cut(s)	458
NdeII	GATC	1 cut(s)	321
NlaIII	CATG	2 cut(s)	185, 396
NlaIV	GGNNCC	1 cut(s)	459
NmuCI	GTSAC	1 cut(s)	577
NsiI	ATGCAT	1 cut(s)	36
NspI	RCATGY	1 cut(s)	396
PaeI	GCATGC	1 cut(s)	396
PctI	GAATGC	1 cut(s)	36
PfeI	GAWTC	2 cut(s)	379, 623
PflMI	CCANNNNNTGG	1 cut(s)	130
PleI	GAGTC	1 cut(s)	621
PluTI	GGCGCC	1 cut(s)	461
PpsI	GAGTC	1 cut(s)	621
Psp6I	CCWGG	1 cut(s)	361
PspGI	CCWGG	1 cut(s)	361
PspN4I	GGNNCC	1 cut(s)	459
PstNI	CAGNNNCTG	1 cut(s)	616
PsuI	RGATCY	1 cut(s)	321
RsaI	GTAC	2 cut(s)	92, 302
RsaNI	GTAC	2 cut(s)	91, 301
SaqAI	TTAA	5 cut(s)	257, 281, 405, 540, 591
Sau3AI	GATC	1 cut(s)	321
SchI	GAGTC	1 cut(s)	622
ScrFI	CCNGG	1 cut(s)	363
SduI	GDGCHC	1 cut(s)	498
SetI	ASST	8 cut(s)	201, 222, 316, 404, 412, 441, 493, 589
SfaNI	GCATC	1 cut(s)	519
SfoI	GGCGCC	1 cut(s)	459
SphI	GCATGC	1 cut(s)	396
Sse9I	AATT	7 cut(s)	44, 126, 278, 413, 470, 479, 594
SspDI	GGCGCC	1 cut(s)	457
StyD4I	CCNGG	1 cut(s)	361
TaaI	ACNGT	2 cut(s)	169, 212
TasI	AATT	7 cut(s)	44, 126, 278, 413, 470, 479, 594
TatI	WGTACW	2 cut(s)	90, 300
TfiI	GAWTC	2 cut(s)	379, 623
Tru1I	TTAA	5 cut(s)	257, 281, 405, 540, 591
Tru9I	TTAA	5 cut(s)	257, 281, 405, 540, 591
TseFI	GTSAC	1 cut(s)	577
Tsp45I	GTSAC	1 cut(s)	577
TspDTI	ATGAA	2 cut(s)	170, 309
Van91I	CCANNNNNTGG	1 cut(s)	130
XapI	RAATTY	3 cut(s)	44, 413, 470
XceI	RCATGY	1 cut(s)	396
Zsp2I	ATGCAT	1 cut(s)	36

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.