Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002914

Physical Location & Seq

Genomic Coordinates Reverse (-)

16852880 .. 16856771

Gene Structure 3892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G40360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2262 bp

ATGACGAAGAGGAGCAAAGGAGCTAACGAAGATAAGCTGATAGAAACCAAAAGCAAAAACGTTTCTGGAAAATCTCAGAAACAGAAGAAACCAGTAGAAGCAGAAAGCTTAAAAGAGGAAGACCTTCTACAAGCATCCGGAACTGATTCTGATTACGACGGAGATAGTTTGCCTGGTTCTTTGAATTCCGACGATTTCGACTCCGATTTTTCCGATTCAGAGGATGATGGAACACATGAAGGAACAGAAGATGGAGATGTAGAATTTTCCGATGACGACGACGTGCTTGAGCATGATGGGTCAATTGATAACGAGGATGATGATGGAAGTGAACATGTAGGTAGTGACAATAATGAGGAACATGGGAGTGATGAAGATTCTGAGCGAGGTGAAGCGGTTGAAGAGAGCGATTCCTCAGAAGATGAGGTTCCATCTAGAAATACAGTTGGGAATGTTCCCTTAAAGTGGTATGAAGATGAGAAACATATTGGTTATGACCTCACTGGGAAGAAGATTACTAAGAAAGAAAAACAAGATAAACTCGACTCTTTTCTTGCAACTATAGATGACTCTAAGACTTGGCGCAAAATTTATGATGAATATAATGACGAGGACGTTGAGCTGACTAAAGAGGAGAGCAAGATCGTTCAGAGAATACTCAAAGGGGAAGCTCCACATGCGGACTTTGATCCATATGCACCTTATGTTGAGTGGTTCAAACATGATGATGCAATACATCCACTCTCAAGTGCACCAGAGCCCAAGCGAAGATTCATCCCTTCAAAATGGGAGGCCAAAAAGGTTGTTAAGATTGTTAGAGCAATACGTAAGGGGTGGATCAAGTTTGATAAGCCTGAAGAAGAGCCCAATGTATACCTTTTATGGGGTGATGATTCGACATCTGATCAAAAGAGCAAGCATTTAACTTATATTCCTCCACCCAAGCTTAAATTGCCAGGACACGATGAATCATACAATCCTTCTTTGGAATATATTCCAACAGAGGAGGAGAAAGCCTCATATGAGTTGATGTTTGAGGAAGATCGTCCAAAATTCATTCCTACAAGGTTTACATCTTTGAGAAGCATCCCTGCGTATGAGAATGCACTGAAGGAGTCTTTTGAGCGTTGTTTGGATCTATACCTATGTCCAAGAGTTCGAAAGAAGAGAATAAACATCGACCCTGAATCTTTGAAGCCTAAGCTACCTAGTAGGAAGGATCTTAGACCTTATCCTAACTCCTGTTATCTTGAATATAAAGGCCATACAGGGGCTGTTACTTCAATATCCACTGATAGTTCTGGCGAGTGGATAGCCTCAGGTTCAACTGATGGATCTGTCCGTATGTGGGAAGTGGAGACTGGTAGATGCCTTAAGGTCTGGCAGTTTGACGAAGCTATCATGTGTGTGGCTTGGAATCCTCTTTCCAGGCTTCCAGTTTTAGCCGTTGCCATGGGACGAGATTTGTTTTTTCTGAACACTGAACTTGGGACTGATGAGGAACAGGAAATTACTAAAGAGAGGCTTCACTCAGGAAACATCCCAGAACCAGACGCATCTGTTGCAGCAATTGTAACCTGGCTACCTGATGAGTTATATGGAGGGATTAAGATAAGACATTTTAAGAGCATATCGTCTATTGACTGGCATCGTAAAGGAGACTATCTCTCAACAGTGATGGCATCCGGGGAAACACGGGGAGTGGTATTGCACCAACTGTCAAAACAGAAAACACAAAGGCTCCCATTTAAGATTCGTGGACTTCCAGTCTGTACACTTTTTCATCCCAGCCTTTCTTACTTCTTCGTTGCGACAAGAAAGGACGTGCGTGTTTACAATCTTTTGAAGCCAGGCGAGGCCACCAAAAAGCTTGAGACAGGATTGAGAGAAATCTCATCAATGGCGATTCATCCTGGTGGTGATAATCTGATAGTAGGAAGCAAAGAAGGGAAGATGTGTTGGTTTGACATGGATCTATCTTCGAAACCATACAAGACTCTCAAGAATCATCCTAAAGACATTACAAATGTGGCAGTTCATCGATCATATCCGTTATTTGCTTCGTGCTCGGAGGATTCAACAGCTTATGTTTTCCATGGAATGGTGTATAATGATCTGAACCAGAATCCTCTGATTGTGCCATTGGAGATTCTAAGAGGTCATTCTTCAAAAGGAGGAGTCTTGGACTGCAAGTTTCATCCGAGACAACCATGGCTATTCACTGCAGGCGCTGACTCTATTATCAAACTCTATTGCCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000463 GO:0000470 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0007276 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0019953 GO:0022414 GO:0022613 GO:0030684 GO:0030686 GO:0030687 GO:0031974 GO:0031981 GO:0032501 GO:0032504 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043021 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044703 GO:0044877 GO:0046483 GO:0048609 GO:0050789 GO:0050794 GO:0051302 GO:0051704 GO:0065007 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BOP1NT WD40

Protein Analysis

753

Amino Acids

85.38

Weight (kDa)

5.14

Isoelectric Point (pI)

40.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BOP1NT	PF08145	157 - 412	7.6e-107	BOP1NT (NUC169) domain
WD40_CDC20-Fz	PF24807	406 - 486	1.4e-06	CDC20/Fizzy WD40 domain
WD40	PF00400	414 - 450	1.9e-09	WD domain, G-beta repeat
WD40_WDHD1_1st	PF24817	414 - 463	1.3e-09	WDHD1 first WD40 domain
Beta-prop_WDR5	PF25175	415 - 474	1.8e-09	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	417 - 477	1e-09	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	417 - 460	5.1e-07	WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	418 - 476	5e-06	WDR36/Utp21 second beta-propeller domain
EIF3I	PF24805	419 - 478	1.7e-10	EIF3I
Beta-prop_WDR5	PF25175	539 - 699	1.8e-06	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	540 - 751	2.3e-10	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	559 - 724	1.8e-06	CDC20/Fizzy WD40 domain
Beta-prop_EML_2	PF23414	595 - 699	8.5e-06	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_1st	PF25173	600 - 751	1.2e-10	WDR3 first beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	603 - 751	6.5e-07	WDR3 second beta-propeller domain
Beta-prop_WDR5	PF25175	628 - 751	5.7e-08	WDR5 beta-propeller domain
WD40_Prp19	PF24814	629 - 750	4e-09	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002914)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40360 AT2G40360
fragaria_vesca	FvH4_5g21650 FvH4_5g21650 FvH4_5g21650
malus_domestica	MD05G1062400.v1.1 MD10G1070100.v1.1
prunus_persica	Prupe.6G114000_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1
pyrus_communis	pycom05g05370 pycom05g05390 pycom10g05570
rosa_chinensis	RchiOBHm_Chr7g0209131 RchiOBHm_Chr7g0241521 RchiOBHm_Chr7g0241531 RchiOBHm_Chr7g0241541
rosa_laevigata	RLG00000000568
rosa_multiflora	Rmu_sc0000821.1_g000025 Rmu_sc0002268.1_g000023
rosa_roxburghii	Rroxscaffold_3G00218950 Rroxscaffold_3G00249700
rosa_rugosa	Rorug07G0109700 Rorug07G0109800 Rorug07G0345000
rosa_samantha	Rh7AG243600 Rh7AG499500 Rh7AG499600 Rh7BG238700 Rh7BG470600 Rh7BG470700 Rh7CG259100 Rh7DG250600 Rh7DG484000 Rh7DG484200
rosa_wichuraiana	Rw7G020660 Rw7G042200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2101
AccI	GTMKAC	1 cut(s)	873
AccIII	TCCGGA	1 cut(s)	137
AciI	CCGC	2 cut(s)	395, 680
AclI	AACGTT	1 cut(s)	60
AclWI	GGATC	6 cut(s)	683, 845, 1143, 1227, 1342, 1980
AcsI	RAATTY	4 cut(s)	184, 263, 588, 1052
AcuI	CTGAAG	2 cut(s)	876, 1130
AfaI	GTAC	1 cut(s)	1774
AfiI	CCNNNNNNNGG	5 cut(s)	465, 883, 1270, 1348, 2101
AflII	CTTAAG	1 cut(s)	1373
AflIII	ACRYGT	1 cut(s)	334
AhdI	GACNNNNNGTC	1 cut(s)	1766
AjiI	CACGTC	2 cut(s)	283, 1825
AjnI	CCWGG	6 cut(s)	172, 955, 1427, 1577, 1849, 1912
AjuI	GAANNNNNNNTTGG	2 cut(s)	755, 787
Alw21I	GWGCWC	2 cut(s)	754, 2069
Alw26I	GTCTC	4 cut(s)	1352, 1653, 1868, 2197
Alw44I	GTGCAC	1 cut(s)	750
AlwI	GGATC	6 cut(s)	683, 845, 1143, 1227, 1342, 1980
AlwNI	CAGNNNCTG	2 cut(s)	1274, 2231
Aor13HI	TCCGGA	1 cut(s)	137
AoxI	GGCC	3 cut(s)	792, 1261, 1857
ApaLI	GTGCAC	1 cut(s)	750
ApeKI	GCWGC	1 cut(s)	1565
ApoI	RAATTY	4 cut(s)	184, 263, 588, 1052
Asp700I	GAANNNNTTC	3 cut(s)	123, 145, 993
AspLEI	GCGC	2 cut(s)	585, 2231
AsuC2I	CCSGG	1 cut(s)	1687
AsuHPI	GGTGA	3 cut(s)	401, 899, 1931
AsuII	TTCGAA	2 cut(s)	1159, 1982
AxyI	CCTNAGG	1 cut(s)	1318
BaeGI	GKGCMC	1 cut(s)	754
BanII	GRGCYC	2 cut(s)	762, 867
BarI	GAAGNNNNNNTAC	2 cut(s)	111, 143
BbsI	GAAGAC	1 cut(s)	126
Bbv12I	GWGCWC	2 cut(s)	754, 2069
BbvI	GCAGC	1 cut(s)	1577
BccI	CCATC	7 cut(s)	221, 245, 290, 317, 439, 1325, 1672
BceAI	ACGGC	1 cut(s)	1430
BciT130I	CCWGG	6 cut(s)	174, 957, 1429, 1579, 1851, 1914
BclI	TGATCA	1 cut(s)	904
BcnI	CCSGG	1 cut(s)	1687
BcoDI	GTCTC	4 cut(s)	1352, 1653, 1868, 2197
BfaI	CTAG	3 cut(s)	435, 1209, 2260
BfmI	CTRYAG	2 cut(s)	561, 2223
BfoI	RGCGCY	1 cut(s)	2232
BfrI	CTTAAG	1 cut(s)	1373
BisI	GCNGC	1 cut(s)	1566
BlsI	GCNGC	1 cut(s)	1567
Bme1390I	CCNGG	7 cut(s)	174, 957, 1429, 1579, 1687, 1851, 1914
BmeRI	GACNNNNNGTC	1 cut(s)	1766
BmgBI	CACGTC	2 cut(s)	283, 1825
BmiI	GGNNCC	2 cut(s)	429, 1742
BmrFI	CCNGG	7 cut(s)	174, 957, 1429, 1579, 1687, 1851, 1914
BmrI	ACTGGG	1 cut(s)	513
BmsI	GCATC	7 cut(s)	143, 718, 1095, 1358, 1565, 1657, 1691
BmuI	ACTGGG	1 cut(s)	513
BpiI	GAAGAC	1 cut(s)	126
BplI	GAGNNNNNCTC	4 cut(s)	1001, 1033, 1650, 1682
Bpu10I	CCTNAGC	1 cut(s)	1200
Bpu14I	TTCGAA	2 cut(s)	1159, 1982
BpuEI	CTTGAG	4 cut(s)	308, 730, 1892, 1985
BpuMI	CCSGG	1 cut(s)	1687
Bsa29I	ATCGAT	1 cut(s)	2041
BsaAI	YACGTR	1 cut(s)	827
BsaJI	CCNNGG	4 cut(s)	1452, 1686, 2095, 2210
BsaWI	WCCGGW	1 cut(s)	137
BsaXI	ACNNNNNCTCC	2 cut(s)	1725, 1755
Bsc4I	CCNNNNNNNGG	5 cut(s)	465, 883, 1270, 1348, 2101
Bse1I	ACTGG	6 cut(s)	92, 508, 1366, 1436, 1649, 1766
Bse21I	CCTNAGG	1 cut(s)	1318
BseAI	TCCGGA	1 cut(s)	137
BseBI	CCWGG	6 cut(s)	174, 957, 1429, 1579, 1851, 1914
BseCI	ATCGAT	1 cut(s)	2041
BseDI	CCNNGG	4 cut(s)	1452, 1686, 2095, 2210
BseLI	CCNNNNNNNGG	5 cut(s)	465, 883, 1270, 1348, 2101
BseMII	CTCAG	5 cut(s)	89, 372, 429, 1332, 1545
BseNI	ACTGG	6 cut(s)	92, 508, 1366, 1436, 1649, 1766
BseRI	GAGGAG	5 cut(s)	25, 647, 1019, 1022, 2190
BseSI	GKGCMC	1 cut(s)	754
BseXI	GCAGC	1 cut(s)	1577
BseYI	CCCAGC	1 cut(s)	1787
BshFI	GGCC	3 cut(s)	794, 1263, 1859
BshVI	ATCGAT	1 cut(s)	2041
BsiHKAI	GWGCWC	2 cut(s)	754, 2069
BsiSI	CCGG	2 cut(s)	138, 1686
BslFI	GGGAC	2 cut(s)	1470, 1504
BslI	CCNNNNNNNGG	5 cut(s)	465, 883, 1270, 1348, 2101
BsmAI	GTCTC	4 cut(s)	1352, 1653, 1868, 2197
BsmFI	GGGAC	2 cut(s)	1470, 1504
BsmI	GAATGC	1 cut(s)	1108
BsnI	GGCC	3 cut(s)	794, 1263, 1859
Bsp119I	TTCGAA	2 cut(s)	1159, 1982
Bsp1286I	GDGCHC	4 cut(s)	754, 762, 867, 2069
Bsp13I	TCCGGA	1 cut(s)	137
Bsp1407I	TGTACA	1 cut(s)	1772
Bsp19I	CCATGG	3 cut(s)	1452, 2095, 2210
BspACI	CCGC	2 cut(s)	395, 680
BspANI	GGCC	3 cut(s)	794, 1263, 1859
BspCNI	CTCAG	5 cut(s)	88, 373, 428, 1331, 1544
BspDI	ATCGAT	1 cut(s)	2041
BspEI	TCCGGA	1 cut(s)	137
BspLI	GGNNCC	2 cut(s)	429, 1742
BspMAI	CTGCAG	1 cut(s)	2227
BspPI	GGATC	6 cut(s)	683, 845, 1143, 1227, 1342, 1980
BspQI	GCTCTTC	1 cut(s)	855
BspT104I	TTCGAA	2 cut(s)	1159, 1982
BspTI	CTTAAG	1 cut(s)	1373
BsrGI	TGTACA	1 cut(s)	1772
BsrI	ACTGG	6 cut(s)	92, 508, 1366, 1436, 1649, 1766
BssECI	CCNNGG	4 cut(s)	1452, 1686, 2095, 2210
BssNAI	GTATAC	1 cut(s)	874
BssT1I	CCWWGG	3 cut(s)	1452, 2095, 2210
Bst1107I	GTATAC	1 cut(s)	874
Bst2UI	CCWGG	6 cut(s)	174, 957, 1429, 1579, 1851, 1914
Bst4CI	ACNGT	3 cut(s)	445, 1675, 1719
Bst6I	CTCTTC	4 cut(s)	2, 396, 855, 1160
BstAFI	CTTAAG	1 cut(s)	1373
BstAPI	GCANNNNNTGC	1 cut(s)	1562
BstAUI	TGTACA	1 cut(s)	1772
BstBAI	YACGTR	1 cut(s)	827
BstBI	TTCGAA	2 cut(s)	1159, 1982
BstC8I	GCNNGC	2 cut(s)	917, 2227
BstDSI	CCRYGG	3 cut(s)	1452, 2095, 2210
BstH2I	RGCGCY	1 cut(s)	2232
BstHHI	GCGC	2 cut(s)	585, 2231
BstMAI	GTCTC	4 cut(s)	1352, 1653, 1868, 2197
BstMWI	GCNNNNNNNGC	3 cut(s)	677, 952, 1562
BstNI	CCWGG	6 cut(s)	174, 957, 1429, 1579, 1851, 1914
BstNSI	RCATGY	2 cut(s)	338, 680
BstSCI	CCNGG	7 cut(s)	172, 955, 1427, 1577, 1685, 1849, 1912
BstSFI	CTRYAG	2 cut(s)	561, 2223
BstSLI	GKGCMC	1 cut(s)	754
BstSNI	TACGTA	1 cut(s)	827
BstV1I	GCAGC	1 cut(s)	1577
BstV2I	GAAGAC	1 cut(s)	126
BstX2I	RGATCY	4 cut(s)	1135, 1219, 1334, 1972
BstYI	RGATCY	4 cut(s)	1135, 1219, 1334, 1972
BstZ17I	GTATAC	1 cut(s)	874
Bsu15I	ATCGAT	1 cut(s)	2041
Bsu36I	CCTNAGG	1 cut(s)	1318
BsuRI	GGCC	3 cut(s)	794, 1263, 1859
BsuTUI	ATCGAT	1 cut(s)	2041
BtgI	CCRYGG	3 cut(s)	1452, 2095, 2210
BtrI	CACGTC	2 cut(s)	283, 1825
BtsI	GCAGTG	1 cut(s)	2220
BtsIMutI	CAGTG	6 cut(s)	501, 1106, 1290, 1479, 1680, 2220
Cac8I	GCNNGC	2 cut(s)	917, 2227
CaiI	CAGNNNCTG	2 cut(s)	1274, 2231
CfoI	GCGC	2 cut(s)	585, 2231
ClaI	ATCGAT	1 cut(s)	2041
CseI	GACGC	1 cut(s)	1562
Csp6I	GTAC	1 cut(s)	1773
CviQI	GTAC	1 cut(s)	1773
DriI	GACNNNNNGTC	1 cut(s)	1766
Eam1104I	CTCTTC	4 cut(s)	2, 396, 855, 1160
Eam1105I	GACNNNNNGTC	1 cut(s)	1766
EarI	CTCTTC	4 cut(s)	2, 396, 855, 1160
Eco105I	TACGTA	1 cut(s)	827
Eco130I	CCWWGG	3 cut(s)	1452, 2095, 2210
Eco24I	GRGCYC	2 cut(s)	762, 867
Eco57I	CTGAAG	2 cut(s)	876, 1130
Eco81I	CCTNAGG	1 cut(s)	1318
EcoRI	GAATTC	1 cut(s)	184
EcoRII	CCWGG	6 cut(s)	172, 955, 1427, 1577, 1849, 1912
EcoT14I	CCWWGG	3 cut(s)	1452, 2095, 2210
EcoT38I	GRGCYC	2 cut(s)	762, 867
ErhI	CCWWGG	3 cut(s)	1452, 2095, 2210
FalI	AAGNNNNNCTT	2 cut(s)	1509, 1541
FaqI	GGGAC	2 cut(s)	1470, 1504
FauNDI	CATATG	2 cut(s)	694, 1021
FbaI	TGATCA	1 cut(s)	904
FblI	GTMKAC	1 cut(s)	873
Fnu4HI	GCNGC	1 cut(s)	1566
FriOI	GRGCYC	2 cut(s)	762, 867
Fsp4HI	GCNGC	1 cut(s)	1566
FspBI	CTAG	3 cut(s)	435, 1209, 2260
GlaI	GCGC	2 cut(s)	584, 2230
GluI	GCNGC	1 cut(s)	1566
GsaI	CCCAGC	1 cut(s)	1791
HaeII	RGCGCY	1 cut(s)	2232
HaeIII	GGCC	3 cut(s)	794, 1263, 1859
HapII	CCGG	2 cut(s)	138, 1686
HgaI	GACGC	1 cut(s)	1562
HhaI	GCGC	2 cut(s)	585, 2231
Hin6I	GCGC	2 cut(s)	583, 2229
HinP1I	GCGC	2 cut(s)	583, 2229
HindIII	AAGCTT	3 cut(s)	106, 944, 1868
HpaII	CCGG	2 cut(s)	138, 1686
HphI	GGTGA	3 cut(s)	401, 899, 1931
Hpy166II	GTNNAC	7 cut(s)	332, 752, 874, 1071, 1760, 1775, 1834
Hpy188III	TCNNGA	6 cut(s)	66, 138, 435, 1250, 1533, 2002
Hpy8I	GTNNAC	7 cut(s)	332, 752, 874, 1071, 1760, 1775, 1834
Hpy99I	CGWCG	4 cut(s)	161, 194, 281, 284
HpyAV	CCTTC	7 cut(s)	134, 233, 789, 990, 1105, 1210, 1940
HpyCH4III	ACNGT	3 cut(s)	445, 1675, 1719
HpyCH4IV	ACGT	5 cut(s)	60, 282, 615, 826, 1824
HpyCH4V	TGCA	9 cut(s)	557, 698, 731, 752, 1106, 1565, 1711, 2190, 2225
HpyF10VI	GCNNNNNNNGC	3 cut(s)	677, 952, 1562
HpySE526I	ACGT	5 cut(s)	60, 282, 615, 826, 1824
HspAI	GCGC	2 cut(s)	583, 2229
Kpn2I	TCCGGA	1 cut(s)	137
Ksp22I	TGATCA	1 cut(s)	904
LguI	GCTCTTC	1 cut(s)	855
LmnI	GCTCC	4 cut(s)	12, 20, 676, 1746
Lsp1109I	GCAGC	1 cut(s)	1577
LweI	GCATC	7 cut(s)	143, 718, 1095, 1358, 1565, 1657, 1691
MaeI	CTAG	3 cut(s)	435, 1209, 2260
MaeII	ACGT	5 cut(s)	60, 282, 615, 826, 1824
MaeIII	GTNAC	3 cut(s)	344, 1276, 1573
MfeI	CAATTG	2 cut(s)	303, 1569
MflI	RGATCY	4 cut(s)	1135, 1219, 1334, 1972
MhlI	GDGCHC	4 cut(s)	754, 762, 867, 2069
MluCI	AATT	8 cut(s)	184, 263, 303, 588, 950, 1052, 1509, 1569
MlyI	GAGTC	7 cut(s)	194, 539, 563, 1124, 1990, 2187, 2228
MmeI	TCCRAC	2 cut(s)	213, 1022
MroI	TCCGGA	1 cut(s)	137
MroXI	GAANNNNTTC	3 cut(s)	123, 145, 993
MseI	TTAA	9 cut(s)	110, 461, 807, 923, 948, 1374, 1608, 1623, 1749
MslI	CAYNNNNRTG	4 cut(s)	366, 726, 1406, 1914
MspCI	CTTAAG	1 cut(s)	1373
MspI	CCGG	2 cut(s)	138, 1686
MspR9I	CCNGG	7 cut(s)	174, 957, 1429, 1579, 1687, 1851, 1914
MunI	CAATTG	2 cut(s)	303, 1569
Mva1269I	GAATGC	1 cut(s)	1108
MvaI	CCWGG	6 cut(s)	174, 957, 1429, 1579, 1851, 1914
MwoI	GCNNNNNNNGC	3 cut(s)	677, 952, 1562
NciI	CCSGG	1 cut(s)	1687
NcoI	CCATGG	3 cut(s)	1452, 2095, 2210
NdeI	CATATG	2 cut(s)	694, 1021
NlaIV	GGNNCC	2 cut(s)	429, 1742
NmuCI	GTSAC	1 cut(s)	344
NspI	RCATGY	2 cut(s)	338, 680
NspV	TTCGAA	2 cut(s)	1159, 1982
PciI	ACATGT	1 cut(s)	334
PciSI	GCTCTTC	1 cut(s)	855
PctI	GAATGC	1 cut(s)	1108
PdmI	GAANNNNTTC	3 cut(s)	123, 145, 993
PflMI	CCANNNNNTGG	1 cut(s)	2101
PkrI	GCNGC	1 cut(s)	1567
PleI	GAGTC	7 cut(s)	194, 539, 563, 1123, 1990, 2186, 2228
PpsI	GAGTC	7 cut(s)	194, 539, 563, 1123, 1990, 2186, 2228
Ppu21I	YACGTR	1 cut(s)	827
PscI	ACATGT	1 cut(s)	334
Psp1406I	AACGTT	1 cut(s)	60
Psp6I	CCWGG	6 cut(s)	172, 955, 1427, 1577, 1849, 1912
PspFI	CCCAGC	1 cut(s)	1787
PspGI	CCWGG	6 cut(s)	172, 955, 1427, 1577, 1849, 1912
PspN4I	GGNNCC	2 cut(s)	429, 1742
PstI	CTGCAG	1 cut(s)	2227
PstNI	CAGNNNCTG	2 cut(s)	1274, 2231
PsuI	RGATCY	4 cut(s)	1135, 1219, 1334, 1972
RsaI	GTAC	1 cut(s)	1774
RsaNI	GTAC	1 cut(s)	1773
RseI	CAYNNNNRTG	4 cut(s)	366, 726, 1406, 1914
SapI	GCTCTTC	1 cut(s)	855
SaqAI	TTAA	9 cut(s)	110, 461, 807, 923, 948, 1374, 1608, 1623, 1749
SatI	GCNGC	1 cut(s)	1566
SchI	GAGTC	7 cut(s)	194, 539, 563, 1124, 1990, 2187, 2228
ScrFI	CCNGG	7 cut(s)	174, 957, 1429, 1579, 1687, 1851, 1914
SduI	GDGCHC	4 cut(s)	754, 762, 867, 2069
SfaNI	GCATC	7 cut(s)	143, 718, 1095, 1358, 1565, 1657, 1691
SfcI	CTRYAG	2 cut(s)	561, 2223
SfuI	TTCGAA	2 cut(s)	1159, 1982
SmiMI	CAYNNNNRTG	4 cut(s)	366, 726, 1406, 1914
SmlI	CTYRAG	5 cut(s)	287, 745, 1373, 1871, 2000
SmoI	CTYRAG	5 cut(s)	287, 745, 1373, 1871, 2000
SnaBI	TACGTA	1 cut(s)	827
Sse9I	AATT	8 cut(s)	184, 263, 303, 588, 950, 1052, 1509, 1569
SsiI	CCGC	2 cut(s)	395, 680
SspMI	CTAG	3 cut(s)	435, 1209, 2260
StyD4I	CCNGG	7 cut(s)	172, 955, 1427, 1577, 1685, 1849, 1912
StyI	CCWWGG	3 cut(s)	1452, 2095, 2210
TaaI	ACNGT	3 cut(s)	445, 1675, 1719
TaiI	ACGT	5 cut(s)	63, 285, 618, 829, 1827
TaqI	TCGA	7 cut(s)	198, 543, 896, 1159, 1179, 1982, 2041
TasI	AATT	8 cut(s)	184, 263, 303, 588, 950, 1052, 1509, 1569
TatI	WGTACW	1 cut(s)	1772
Tru1I	TTAA	9 cut(s)	110, 461, 807, 923, 948, 1374, 1608, 1623, 1749
Tru9I	TTAA	9 cut(s)	110, 461, 807, 923, 948, 1374, 1608, 1623, 1749
TscAI	CASTG	6 cut(s)	508, 1113, 1297, 1486, 1680, 2227
TseFI	GTSAC	1 cut(s)	344
TseI	GCWGC	1 cut(s)	1565
Tsp45I	GTSAC	1 cut(s)	344
TspGWI	ACGGA	3 cut(s)	174, 1331, 2040
TspRI	CASTG	6 cut(s)	508, 1113, 1297, 1486, 1680, 2227
Van91I	CCANNNNNTGG	1 cut(s)	2101
Vha464I	CTTAAG	1 cut(s)	1373
VneI	GTGCAC	1 cut(s)	750
XapI	RAATTY	4 cut(s)	184, 263, 588, 1052
XbaI	TCTAGA	1 cut(s)	434
XceI	RCATGY	2 cut(s)	338, 680
XmiI	GTMKAC	1 cut(s)	873
XmnI	GAANNNNTTC	3 cut(s)	123, 145, 993
XspI	CTAG	3 cut(s)	435, 1209, 2260

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.