Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0002914

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG470600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGTTGATGGAGAGCTGGCTCTTGAGAAGCTTATCTGCTTTGCTTGCATTTTGGGCACAATGTTCACCTCATCTTGATGAAAAACTTGATGATTCTTGCCGATTCTTGAATGTACCAGATATGTCTGGTGGTGAAGGATCTGACTTAGAGGATTATCCATCAATCAGAGACACAGACTCGGAAGATGAAGAGAGTGGTTCCTCTGAAAATGAGGGTGAGCTCAACACCAGCAGAAATGATGGTTTGGCCATTGATCATGGTAATGAGGAGGAAAGTGATAGTTCTGGACTTCATGAAGCAGTCGAGGAAAGTGATTCATCTGAAGATGAGGTTGCTCCCCGAAATACAATTGGTGCTGTTCCCTTGGAGTGGTATCGGGATGAGAAACATATTGGTTATGATCTTACAGGGAAGAAGATTAAAAAGAAGGAAAGAGAAGATAAATTACAATCCTTTCTTGCTAGTGCTGATGATTCCAAAAATTGGCGCAAATTTTTGGATGAATACAATGACGAGGAAGTAGAAGTGACAAAAGAAGATATGAAAACTATAAATAGATTGCTTGAAGGAAAGGCGCCACACGGTGACTTTGATCCATATGCGCCTTATGTTGATTGGTTTAAATGGGATGACTCAAAGCATCCACTGTCAAATGCCCCTGAACCCAAGAGACGATTCATTCCTTCAAAATCTGAAAGTAAACTGGTGAAGAGGTTAGTATTAGCAATTCGGAAGGGTTTAATTAAGCCTACAAAGGATGAAGAAGAGGAAGAAGAAAGTGTTTATCCCTTGTGGGGAGACGACTCTAATTCAACGGAAAAGGATGGTAGCCATTTATCTTACATTCCAGCGCCAAAGCCAAAATTGCCAGGGTATGAGGAGTCCTTCAATCCTCCTCCGGAATTCATCCCAACACAAGAAGAGATTGATGCTTATCAGTTAATGTATGAGGAAGACCGCCCTAAGTTTATACCGAAAAGGTTTACATCTATGAGAAGCATCCCTGCATATGAGAATGCTATTAAGGAGTGCTTCGAAAGATGTTTGGATCTATACTTGTGCCCCAGAGTTCGGAAGAAACGTATCAATATTGATCCTGAATCTCTGAAGCCCAAGCTACCAAGCCGAAAGGATCTCAAGCCTTATCCTGTGAAATGTTATCTAGAGTATAGAGGTCACAAAGACACAGTTACATCAGTTTCCACAGAAGCTTCAGGGCAGTGGATTGCATCAGGTTCATCGGATGGAACTGTGCGTATTTGGGAGGTTGAAACTGGTAGATGTCTCAAACTCTGGGAGATTGGAGAAGCTGTCACATATGTAGCTTGGAATCCCAATCCTGAGTATTCCGTATTGGCTGTCTCTGTGGGACAAGATGTACTTATTCTCAACACTGGTTTTGGGAATGAAGAAGTACAGAAAAAAACTAAAGAACTTCTTTCGGCTGAAAGACCTACCACACCAGATGACACGGCTACCTTCGTGAGCTGGATTCAAGATGAAACACATGAGGGCACCAGGTTAAGACATTTTAAGACTGTGTCTTCAGTGGAATGGCATCGTAGAGGAGACTACTTTTCAACGGTGGTGCCAGCAGGCCAATCGAAATCAATTTTTATGCATAGGCTCTCTCAGAAGTCTACCCAGACATTTTCAATCAAGTTGGGTGGGCTTGCAGTTACTTCAGTTTTCCATCCTGTTCGCTCCCACATCTTCATTTCTACAAAGAAAACTATTCGCCAATATGATTTGGTGAAGGGAAAGCAAATCAGAAAGCTTGATACAGGACTAAAAGAAATCTCCTCCATTGCAGTTCATCCTTCTGGTGATCATGTAATTGTGGGGAGCAGAGAAGGAAAATTTTGTTGGTTTGATATGGACCTTTCAACCAAAAAACCTTACCTTATTCGCCACGCTGATTTTCACAATTTTATCAGGTGGCATAAGAAGGACATCAACAATGTGTCTATCCATCGTTTATATCCGTTGTTTGCAACATGCTCTGATGATTGCACTGTACAAGTTTCTCATGGCATGGTTTATTCAGATCTTAACCAGAACCCTCTTATAGTTCCACTGGAAATACTCCGAGGTCATGCAAGCTCAGATGGGAGAGGTGTAATGGATTGCAAATTCCACCCAAGGCAGCCCTGGTTGTTCACGGCCGGTGCTGACTCGGTGATCAGACTTTACTGCGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030684 GO:0030686 GO:0030687 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043021 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044877 GO:0046483 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BOP1NT WD40

Protein Analysis

733

Amino Acids

83.67

Weight (kDa)

5.49

Isoelectric Point (pI)

45.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BOP1NT	PF08145	125 - 383	3.9e-100	BOP1NT (NUC169) domain
WD40_CDC20-Fz	PF24807	380 - 455	3.4e-06	CDC20/Fizzy WD40 domain
WD40	PF00400	385 - 421	9.8e-10	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	386 - 465	1.2e-12	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	388 - 520	4.4e-11	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	388 - 459	4.5e-08	WDR3 first beta-propeller domain
WD40_WDHD1_1st	PF24817	388 - 470	1.1e-10	WDHD1 first WD40 domain
WD40_Prp19	PF24814	389 - 452	4.6e-06	Prp19 WD40 domain
Beta-prop_WDR36-Utp21_2nd	PF25168	389 - 450	1.2e-06	WDR36/Utp21 second beta-propeller domain
EIF3I	PF24805	390 - 454	5.8e-09	EIF3I
WD40_Prp19	PF24814	499 - 629	6.9e-07	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	510 - 731	2.8e-11	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	533 - 680	2.1e-06	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	572 - 731	6.3e-07	WDR3 first beta-propeller domain
Beta-prop_EML_2	PF23414	573 - 675	5.2e-06	Echinoderm microtubule-associated protein second beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0002914)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40360 AT2G40360
fragaria_vesca	FvH4_5g21650 FvH4_5g21650 FvH4_5g21650
malus_domestica	MD05G1062400.v1.1 MD10G1070100.v1.1
prunus_persica	Prupe.6G114000_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1
pyrus_communis	pycom05g05370 pycom05g05390 pycom10g05570
rosa_chinensis	RchiOBHm_Chr7g0209131 RchiOBHm_Chr7g0241521 RchiOBHm_Chr7g0241531 RchiOBHm_Chr7g0241541
rosa_laevigata	RLG00000000568
rosa_multiflora	Rmu_sc0000821.1_g000025 Rmu_sc0002268.1_g000023
rosa_roxburghii	Rroxscaffold_3G00218950 Rroxscaffold_3G00249700
rosa_rugosa	Rorug07G0109700 Rorug07G0109800 Rorug07G0345000
rosa_samantha	Rh7AG243600 Rh7AG499500 Rh7AG499600 Rh7BG238700 Rh7BG470600 Rh7BG470700 Rh7CG259100 Rh7DG250600 Rh7DG484000 Rh7DG484200
rosa_wichuraiana	Rw7G020660 Rw7G042200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	574, 1514, 1588
AccB7I	CCANNNNNTGG	1 cut(s)	483
AccI	GTMKAC	1 cut(s)	1640
AccIII	TCCGGA	1 cut(s)	898
AciI	CCGC	1 cut(s)	958
AclWI	GGATC	5 cut(s)	145, 587, 1056, 1088, 1140
AcoI	YGGCCR	2 cut(s)	246, 2163
AcsI	RAATTY	4 cut(s)	491, 902, 1859, 2132
AcuI	CTGAAG	5 cut(s)	342, 1127, 1197, 1530, 1668
AcyI	GRCGYC	1 cut(s)	575
AdeI	CACNNNGTG	1 cut(s)	584
AfaI	GTAC	4 cut(s)	114, 1380, 1416, 2019
AfiI	CCNNNNNNNGG	4 cut(s)	369, 483, 794, 1071
AjnI	CCWGG	3 cut(s)	868, 1517, 2150
AjuI	GAANNNNNNNTTGG	4 cut(s)	659, 691, 1849, 1881
Alw21I	GWGCWC	1 cut(s)	222
Alw26I	GTCTC	6 cut(s)	162, 664, 792, 1289, 1366, 1563
AlwI	GGATC	5 cut(s)	145, 587, 1056, 1088, 1140
Aor13HI	TCCGGA	1 cut(s)	898
AoxI	GGCC	3 cut(s)	246, 1597, 2163
ApeKI	GCWGC	1 cut(s)	2146
ApoI	RAATTY	4 cut(s)	491, 902, 1859, 2132
AspLEI	GCGC	4 cut(s)	489, 577, 604, 853
AspS9I	GGNCC	1 cut(s)	1879
AsuHPI	GGTGA	8 cut(s)	57, 143, 227, 596, 718, 1765, 1838, 2191
AsuII	TTCGAA	1 cut(s)	1035
AvaII	GGWCC	1 cut(s)	1879
BaeGI	GKGCMC	3 cut(s)	58, 1064, 1517
BalI	TGGCCA	1 cut(s)	248
BanI	GGYRCC	3 cut(s)	574, 1514, 1588
BanII	GRGCYC	1 cut(s)	222
BarI	GAAGNNNNNNTAC	2 cut(s)	429, 461
BbsI	GAAGAC	2 cut(s)	960, 1536
Bbv12I	GWGCWC	1 cut(s)	222
BbvI	GCAGC	1 cut(s)	2158
BccI	CCATC	7 cut(s)	166, 233, 818, 1238, 1701, 1980, 2102
BceAI	ACGGC	2 cut(s)	1488, 2178
BcgI	CGANNNNNNTGC	2 cut(s)	1584, 1618
BciT130I	CCWGG	3 cut(s)	870, 1519, 2152
BclI	TGATCA	3 cut(s)	253, 1828, 2181
BcoDI	GTCTC	6 cut(s)	162, 664, 792, 1289, 1366, 1563
BfaI	CTAG	2 cut(s)	462, 1163
BfoI	RGCGCY	2 cut(s)	578, 854
BglII	AGATCT	1 cut(s)	2047
BisI	GCNGC	1 cut(s)	2147
BlsI	GCNGC	1 cut(s)	2148
Bme1390I	CCNGG	3 cut(s)	870, 1519, 2152
Bme18I	GGWCC	1 cut(s)	1879
BmgT120I	GGNCC	1 cut(s)	1879
BmiI	GGNNCC	4 cut(s)	199, 576, 1516, 1590
BmrFI	CCNGG	3 cut(s)	870, 1519, 2152
BmsI	GCATC	5 cut(s)	649, 919, 1008, 1238, 1567
BpiI	GAAGAC	2 cut(s)	960, 1536
Bpu14I	TTCGAA	1 cut(s)	1035
BpuEI	CTTGAG	2 cut(s)	43, 1121
BsaBI	GATNNNNATC	1 cut(s)	933
BsaHI	GRCGYC	1 cut(s)	575
BsaJI	CCNNGG	5 cut(s)	363, 869, 2089, 2141, 2150
BsaWI	WCCGGW	1 cut(s)	898
BsaXI	ACNNNNNCTCC	2 cut(s)	1296, 1326
Bsc4I	CCNNNNNNNGG	4 cut(s)	369, 483, 794, 1071
Bse118I	RCCGGY	1 cut(s)	2165
Bse1I	ACTGG	4 cut(s)	708, 1279, 1399, 2082
Bse3DI	GCAATG	1 cut(s)	1806
Bse8I	GATNNNNATC	1 cut(s)	933
BseAI	TCCGGA	1 cut(s)	898
BseBI	CCWGG	3 cut(s)	870, 1519, 2152
BseDI	CCNNGG	5 cut(s)	363, 869, 2089, 2141, 2150
BseJI	GATNNNNATC	1 cut(s)	933
BseLI	CCNNNNNNNGG	4 cut(s)	369, 483, 794, 1071
BseMI	GCAATG	1 cut(s)	1806
BseMII	CTCAG	3 cut(s)	1332, 1646, 2118
BseNI	ACTGG	4 cut(s)	708, 1279, 1399, 2082
BseRI	GAGGAG	5 cut(s)	281, 885, 893, 1581, 1792
BseSI	GKGCMC	3 cut(s)	58, 1064, 1517
BseX3I	CGGCCG	1 cut(s)	2163
BseXI	GCAGC	1 cut(s)	2158
Bsh1285I	CGRYCG	1 cut(s)	2166
BshFI	GGCC	3 cut(s)	248, 1599, 2165
BshNI	GGYRCC	3 cut(s)	574, 1514, 1588
BsiEI	CGRYCG	1 cut(s)	2166
BsiHKAI	GWGCWC	1 cut(s)	222
BsiSI	CCGG	2 cut(s)	899, 2166
BslFI	GGGAC	1 cut(s)	1383
BslI	CCNNNNNNNGG	4 cut(s)	369, 483, 794, 1071
BsmAI	GTCTC	6 cut(s)	162, 664, 792, 1289, 1366, 1563
BsmBI	CGTCTC	2 cut(s)	664, 792
BsmFI	GGGAC	1 cut(s)	1383
BsmI	GAATGC	1 cut(s)	1021
BsnI	GGCC	3 cut(s)	248, 1599, 2165
Bsp119I	TTCGAA	1 cut(s)	1035
Bsp1286I	GDGCHC	4 cut(s)	58, 222, 1064, 1517
Bsp13I	TCCGGA	1 cut(s)	898
Bsp1407I	TGTACA	1 cut(s)	2017
BspACI	CCGC	1 cut(s)	958
BspANI	GGCC	3 cut(s)	248, 1599, 2165
BspCNI	CTCAG	3 cut(s)	1333, 1645, 2117
BspEI	TCCGGA	1 cut(s)	898
BspHI	TCATGA	1 cut(s)	292
BspLI	GGNNCC	4 cut(s)	199, 576, 1516, 1590
BspPI	GGATC	5 cut(s)	145, 587, 1056, 1088, 1140
BspT104I	TTCGAA	1 cut(s)	1035
BspT107I	GGYRCC	3 cut(s)	574, 1514, 1588
BsrDI	GCAATG	1 cut(s)	1806
BsrFI	RCCGGY	1 cut(s)	2165
BsrGI	TGTACA	1 cut(s)	2017
BsrI	ACTGG	4 cut(s)	708, 1279, 1399, 2082
BssAI	RCCGGY	1 cut(s)	2165
BssECI	CCNNGG	5 cut(s)	363, 869, 2089, 2141, 2150
BssNI	GRCGYC	1 cut(s)	575
BssT1I	CCWWGG	2 cut(s)	363, 2141
Bst2UI	CCWGG	3 cut(s)	870, 1519, 2152
Bst4CI	ACNGT	7 cut(s)	584, 648, 1189, 1252, 1540, 1585, 2017
Bst6I	CTCTTC	4 cut(s)	183, 704, 759, 915
BstACI	GRCGYC	1 cut(s)	575
BstAUI	TGTACA	1 cut(s)	2017
BstBI	TTCGAA	1 cut(s)	1035
BstC8I	GCNNGC	6 cut(s)	17, 45, 1593, 1597, 1674, 2101
BstDEI	CTNAG	5 cut(s)	145, 963, 1341, 1632, 2104
BstH2I	RGCGCY	2 cut(s)	578, 854
BstHHI	GCGC	4 cut(s)	489, 577, 604, 853
BstMAI	GTCTC	6 cut(s)	162, 664, 792, 1289, 1366, 1563
BstMCI	CGRYCG	1 cut(s)	2166
BstMWI	GCNNNNNNNGC	3 cut(s)	44, 53, 865
BstNI	CCWGG	3 cut(s)	870, 1519, 2152
BstNSI	RCATGY	1 cut(s)	2001
BstSCI	CCNGG	3 cut(s)	868, 1517, 2150
BstSLI	GKGCMC	3 cut(s)	58, 1064, 1517
BstV1I	GCAGC	1 cut(s)	2158
BstV2I	GAAGAC	2 cut(s)	960, 1536
BstX2I	RGATCY	4 cut(s)	137, 1048, 1132, 2047
BstYI	RGATCY	4 cut(s)	137, 1048, 1132, 2047
BstZI	CGGCCG	1 cut(s)	2163
BsuRI	GGCC	3 cut(s)	248, 1599, 2165
BtsI	GCAGTG	1 cut(s)	1226
BtsIMutI	CAGTG	6 cut(s)	644, 1226, 1392, 1554, 2013, 2075
Cac8I	GCNNGC	6 cut(s)	17, 45, 1593, 1597, 1674, 2101
CciI	TCATGA	1 cut(s)	292
CfoI	GCGC	4 cut(s)	489, 577, 604, 853
Cfr10I	RCCGGY	1 cut(s)	2165
Cfr13I	GGNCC	1 cut(s)	1879
CsiI	ACCWGGT	1 cut(s)	1517
Csp6I	GTAC	4 cut(s)	113, 1379, 1415, 2018
CspCI	CAANNNNNGTGG	2 cut(s)	1648, 1683
CviAII	CATG	8 cut(s)	257, 293, 1508, 1832, 1998, 2030, 2035, 2096
CviQI	GTAC	4 cut(s)	113, 1379, 1415, 2018
DdeI	CTNAG	5 cut(s)	145, 963, 1341, 1632, 2104
DinI	GGCGCC	1 cut(s)	576
DraI	TTTAAA	1 cut(s)	622
DraIII	CACNNNGTG	1 cut(s)	584
EaeI	YGGCCR	2 cut(s)	246, 2163
EagI	CGGCCG	1 cut(s)	2163
Eam1104I	CTCTTC	4 cut(s)	183, 704, 759, 915
EarI	CTCTTC	4 cut(s)	183, 704, 759, 915
Ecl136II	GAGCTC	1 cut(s)	220
EclXI	CGGCCG	1 cut(s)	2163
Eco130I	CCWWGG	2 cut(s)	363, 2141
Eco24I	GRGCYC	1 cut(s)	222
Eco47I	GGWCC	1 cut(s)	1879
Eco52I	CGGCCG	1 cut(s)	2163
Eco53kI	GAGCTC	1 cut(s)	220
Eco57I	CTGAAG	5 cut(s)	342, 1127, 1197, 1530, 1668
EcoICRI	GAGCTC	1 cut(s)	220
EcoRI	GAATTC	1 cut(s)	902
EcoRII	CCWGG	3 cut(s)	868, 1517, 2150
EcoT14I	CCWWGG	2 cut(s)	363, 2141
EcoT22I	ATGCAT	1 cut(s)	1623
EcoT38I	GRGCYC	1 cut(s)	222
EgeI	GGCGCC	1 cut(s)	576
EheI	GGCGCC	1 cut(s)	576
ErhI	CCWWGG	2 cut(s)	363, 2141
Esp3I	CGTCTC	2 cut(s)	664, 792
FaeI	CATG	8 cut(s)	260, 296, 1511, 1835, 2001, 2033, 2038, 2099
FalI	AAGNNNNNCTT	6 cut(s)	1016, 1048, 1365, 1397, 1422, 1454
FaqI	GGGAC	1 cut(s)	1383
FatI	CATG	8 cut(s)	256, 292, 1507, 1831, 1997, 2029, 2034, 2095
FauNDI	CATATG	3 cut(s)	598, 1009, 1318
FbaI	TGATCA	3 cut(s)	253, 1828, 2181
FblI	GTMKAC	1 cut(s)	1640
Fnu4HI	GCNGC	1 cut(s)	2147
FriOI	GRGCYC	1 cut(s)	222
Fsp4HI	GCNGC	1 cut(s)	2147
FspBI	CTAG	2 cut(s)	462, 1163
GlaI	GCGC	4 cut(s)	488, 576, 603, 852
GluI	GCNGC	1 cut(s)	2147
HaeII	RGCGCY	2 cut(s)	578, 854
HaeIII	GGCC	3 cut(s)	248, 1599, 2165
HapII	CCGG	2 cut(s)	899, 2166
HhaI	GCGC	4 cut(s)	489, 577, 604, 853
Hin1I	GRCGYC	1 cut(s)	575
Hin1II	CATG	8 cut(s)	260, 296, 1511, 1835, 2001, 2033, 2038, 2099
Hin6I	GCGC	4 cut(s)	487, 575, 602, 851
HinP1I	GCGC	4 cut(s)	487, 575, 602, 851
HindIII	AAGCTT	3 cut(s)	28, 1209, 1775
HpaII	CCGG	2 cut(s)	899, 2166
HphI	GGTGA	8 cut(s)	57, 143, 227, 596, 718, 1765, 1838, 2191
Hpy166II	GTNNAC	5 cut(s)	65, 701, 984, 1641, 2160
Hpy8I	GTNNAC	5 cut(s)	65, 701, 984, 1641, 2160
HpyCH4III	ACNGT	7 cut(s)	584, 648, 1189, 1252, 1540, 1585, 2017
HpyCH4IV	ACGT	1 cut(s)	1081
HpyF10VI	GCNNNNNNNGC	3 cut(s)	44, 53, 865
HpyF3I	CTNAG	5 cut(s)	145, 963, 1341, 1632, 2104
HpySE526I	ACGT	1 cut(s)	1081
Hsp92I	GRCGYC	1 cut(s)	575
Hsp92II	CATG	8 cut(s)	260, 296, 1511, 1835, 2001, 2033, 2038, 2099
HspAI	GCGC	4 cut(s)	487, 575, 602, 851
KasI	GGCGCC	1 cut(s)	574
Kpn2I	TCCGGA	1 cut(s)	898
Ksp22I	TGATCA	3 cut(s)	253, 1828, 2181
LmnI	GCTCC	3 cut(s)	340, 1709, 1845
Lsp1109I	GCAGC	1 cut(s)	2158
LweI	GCATC	5 cut(s)	649, 919, 1008, 1238, 1567
MabI	ACCWGGT	1 cut(s)	1517
MaeI	CTAG	2 cut(s)	462, 1163
MaeII	ACGT	1 cut(s)	1081
MaeIII	GTNAC	6 cut(s)	526, 584, 1175, 1189, 1312, 1678
MfeI	CAATTG	1 cut(s)	348
MflI	RGATCY	4 cut(s)	137, 1048, 1132, 2047
MhlI	GDGCHC	4 cut(s)	58, 222, 1064, 1517
MlsI	TGGCCA	1 cut(s)	248
MluNI	TGGCCA	1 cut(s)	248
Mly113I	GGCGCC	1 cut(s)	575
MlyI	GAGTC	5 cut(s)	170, 626, 797, 890, 2168
Mox20I	TGGCCA	1 cut(s)	248
Mph1103I	ATGCAT	1 cut(s)	1623
MroI	TCCGGA	1 cut(s)	898
MscI	TGGCCA	1 cut(s)	248
MseI	TTAA	9 cut(s)	420, 621, 740, 744, 941, 1023, 1523, 1533, 2052
MslI	CAYNNNNRTG	2 cut(s)	75, 261
Msp20I	TGGCCA	1 cut(s)	248
MspI	CCGG	2 cut(s)	899, 2166
MspR9I	CCNGG	3 cut(s)	870, 1519, 2152
MunI	CAATTG	1 cut(s)	348
Mva1269I	GAATGC	1 cut(s)	1021
MvaI	CCWGG	3 cut(s)	870, 1519, 2152
MwoI	GCNNNNNNNGC	3 cut(s)	44, 53, 865
NarI	GGCGCC	1 cut(s)	575
NdeI	CATATG	3 cut(s)	598, 1009, 1318
NlaIII	CATG	8 cut(s)	260, 296, 1511, 1835, 2001, 2033, 2038, 2099
NlaIV	GGNNCC	4 cut(s)	199, 576, 1516, 1590
NmuCI	GTSAC	4 cut(s)	526, 584, 1175, 1312
NsiI	ATGCAT	1 cut(s)	1623
NspI	RCATGY	1 cut(s)	2001
NspV	TTCGAA	1 cut(s)	1035
PacI	TTAATTAA	1 cut(s)	744
PagI	TCATGA	1 cut(s)	292
PcsI	WCGNNNNNNNCGW	1 cut(s)	1078
PctI	GAATGC	1 cut(s)	1021
PfeI	GAWTC	8 cut(s)	92, 102, 314, 473, 675, 1100, 1330, 1492
PflFI	GACNNNGTC	1 cut(s)	1540
PflMI	CCANNNNNTGG	1 cut(s)	483
PkrI	GCNGC	1 cut(s)	2148
PleI	GAGTC	5 cut(s)	170, 626, 797, 889, 2168
PluTI	GGCGCC	1 cut(s)	578
PpsI	GAGTC	5 cut(s)	170, 626, 797, 889, 2168
Psp124BI	GAGCTC	1 cut(s)	222
Psp6I	CCWGG	3 cut(s)	868, 1517, 2150
PspGI	CCWGG	3 cut(s)	868, 1517, 2150
PspN4I	GGNNCC	4 cut(s)	199, 576, 1516, 1590
PspPI	GGNCC	1 cut(s)	1879
PsuI	RGATCY	4 cut(s)	137, 1048, 1132, 2047
PsyI	GACNNNGTC	1 cut(s)	1540
RsaI	GTAC	4 cut(s)	114, 1380, 1416, 2019
RsaNI	GTAC	4 cut(s)	113, 1379, 1415, 2018
RseI	CAYNNNNRTG	2 cut(s)	75, 261
SacI	GAGCTC	1 cut(s)	222
SaqAI	TTAA	9 cut(s)	420, 621, 740, 744, 941, 1023, 1523, 1533, 2052
SatI	GCNGC	1 cut(s)	2147
Sau96I	GGNCC	1 cut(s)	1879
SchI	GAGTC	5 cut(s)	170, 626, 797, 890, 2168
ScrFI	CCNGG	3 cut(s)	870, 1519, 2152
SduI	GDGCHC	4 cut(s)	58, 222, 1064, 1517
SexAI	ACCWGGT	1 cut(s)	1517
SfaNI	GCATC	5 cut(s)	649, 919, 1008, 1238, 1567
SfoI	GGCGCC	1 cut(s)	576
SfuI	TTCGAA	1 cut(s)	1035
SinI	GGWCC	1 cut(s)	1879
SmiMI	CAYNNNNRTG	2 cut(s)	75, 261
SmlI	CTYRAG	2 cut(s)	22, 1136
SmoI	CTYRAG	2 cut(s)	22, 1136
SsiI	CCGC	1 cut(s)	958
SspDI	GGCGCC	1 cut(s)	574
SspI	AATATT	1 cut(s)	1090
SspMI	CTAG	2 cut(s)	462, 1163
SstI	GAGCTC	1 cut(s)	222
StyD4I	CCNGG	3 cut(s)	868, 1517, 2150
StyI	CCWWGG	2 cut(s)	363, 2141
TaaI	ACNGT	7 cut(s)	584, 648, 1189, 1252, 1540, 1585, 2017
TaiI	ACGT	1 cut(s)	1084
TaqI	TCGA	3 cut(s)	303, 1035, 1604
TatI	WGTACW	3 cut(s)	1378, 1414, 2017
TfiI	GAWTC	8 cut(s)	92, 102, 314, 473, 675, 1100, 1330, 1492
Tru1I	TTAA	9 cut(s)	420, 621, 740, 744, 941, 1023, 1523, 1533, 2052
Tru9I	TTAA	9 cut(s)	420, 621, 740, 744, 941, 1023, 1523, 1533, 2052
TscAI	CASTG	6 cut(s)	651, 1226, 1399, 1554, 2020, 2082
TseFI	GTSAC	4 cut(s)	526, 584, 1175, 1312
TseI	GCWGC	1 cut(s)	2146
Tsp45I	GTSAC	4 cut(s)	526, 584, 1175, 1312
TspGWI	ACGGA	3 cut(s)	830, 1339, 1974
TspRI	CASTG	6 cut(s)	651, 1226, 1399, 1554, 2020, 2082
Tth111I	GACNNNGTC	1 cut(s)	1540
Van91I	CCANNNNNTGG	1 cut(s)	483
VpaK11BI	GGWCC	1 cut(s)	1879
XapI	RAATTY	4 cut(s)	491, 902, 1859, 2132
XbaI	TCTAGA	1 cut(s)	1162
XceI	RCATGY	1 cut(s)	2001
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2148
XmiI	GTMKAC	1 cut(s)	1640
XspI	CTAG	2 cut(s)	462, 1163
Zsp2I	ATGCAT	1 cut(s)	1623

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.