Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0002914

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG484000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2295 bp

ATGTGGATACGTAATTACGTAAATAAACTGGATACGTGGGGGTACATTTGGGTTTTTACCCTTAAAAAAAAAAAACAAAAACAGAAGACTACAGATCGACCTAACTCACCGCCGCTTCGCTTAATCGATCGTTCACTCGTTCCTCTCTTCTCATCTTCTTCGCAAGTCGCAGCTACCACCTACAGAGTTCTCATCTACTTCGTTTCGCTTGGAGCTTCAATCAAACTCGCTCCGGATATGTCTGGTGGTGAAGGATCTGACTTAGAGGATTATCCATCAATCAGAGACACAGACTCGGAAGATGAAGAGAGTGGTTCCTCTGAAAATGAGGGTGAGCTCAACACCAGCAGAAATGATGGTTTGGCCATTGATCATGGTAATGAGGAGGAAAGTGATAGTTCTGGACTTCATGAAGCAGTCGAGGAAAGTGATTCATCTGAAGATGAGGTTGCTCCCCGAAATACAATTGGTGCTGTTCCCTTGGAGTGGTATCGGGATGAGAAACATATTGGTTATGATCTTACAGGGAAGAAGATTAAAAAGAAGGAAAGAGAAGATAAATTACAATCCTTTCTTGCTAGTGCTGATGATTCCAAAAATTGGCGCAAATTTTTGGATGAATACAATGACGAGGAAGTAGAAGTGACAAAAGAAGATATGAAAACTATAAATAGATTGCTTGAAGGAAAGGCGCCACACGGTGACTTTGATCCATATGCGCCTTATGTTGATTGGTTTAAATGGGATGACTCAAAGCATCCACTGTCAAATGCCCCTGAACCCAAGAGACGATTCATTCCTTCAAAATCTGAAAGTAAACTGGTGAAGAGGTTAGTATTAGCAATTCGGAAGGGTTTAATTAAGCCTACAAAGGATGAAGAAGAGGAAGAAGAAAGTGTTTATCCCTTGTGGGGAGACGACTCTAATTCAACGGAAAAGGATGGTAGCCATTTATCTTACATTCCAGCGCCAAAGCCAAAATTGCCAGGGTATGAGGAGTCCTTCAATCCTCCTCCGGAATTCATCCCAACACAAGAAGAGATTGATGCTTATCAGTTAATGTATGAGGAAGACCGCCCTAAGTTTATACCGAAAAGGTTTACATCTATGAGAAGCATCCCTGCATATGAGAATGCTATTAAGGAGTGCTTCGAAAGATGTTTGGATCTATACTTGTGCCCCAGAGTTCGGAAGAAACGTATCAATATTGATCCTGAATCTCTGAAGCCCAAGCTACCAAGCCGAAAGGATCTCAAGCCTTATCCTGTGAAATGTTATCTAGAGTATAGAGGTCACAAAGACACAGTTACATCAGTTTCCACAGAAGCTTCAGGGCAGTGGATTGCATCAGGTTCATCGGATGGAACTGTGCGTATTTGGGAGGTTGAAACTGGTAGATGTCTCAAACTCTGGGAGATTGGAGAAGCTGTCACATATGTAGCTTGGAATCCCAATCCTGAGTATTCCGTATTGGCTGTCTCTGTGGGACAAGATGTACTTATTCTCAACACTGGTTTTGGGAATGAAGAAGTACAGAAAAAAACTAAAGAACTTCTTTCGGCTGAAAGACCTACCACACCAGATGACACGGCTACCTTCGTGAGCTGGATTCAAGATGAAACACATGAGGGCACCAGGTTAAGACATTTTAAGACTGTGTCTTCAGTGGAATGGCATCGTAGAGGAGACTACTTTTCAACGGTGGTGCCAGCAGGCCAATCGAAATCAATTTTTATGCATAGGCTCTCTCAGAAGTCTACCCAGACATTTTCAATCAAGTTGGGTGGGCTTGCAGTTACTTCAGTTTTCCATCCTGTTCGCTCCCACATCTTCATTTCTACAAAGAAAACTATTCGCCAATATGATTTGGTGAAGGGAAAGCAAATCAGAAAGCTTGATACAGGACTAAAAGAAATCTCCTCCATTGCAGTTCATCCTTCTGGTGATCATGTAATTGTGGGGAGCAGAGAAGGAAAATTTTGTTGGTTTGATATGGACCTTTCAACCAAAAAACCTTACCTTATTCGCCAGTGGCATAAGAAGGACATCAACAATGTGTCTATCCATCGTTTATATCCGTTGTTTGCAACATGCTCTGATGATTGCACTGTACAAGTTTCTCATGGCATGGTTTATTCAGATCTTAACCAGAACGCTCTTATAGTTCCACTGGAAATACTCCGAGGTCATGCAAGCTCAGATGGGAGAGGTGTAATGGATTGCAAATTCCACCCAAGGCAGCCCTGGTTGTTCACGGCCGGTGCTGACTCGGTGATCAGACTTTACTGCGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030684 GO:0030686 GO:0030687 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043021 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044877 GO:0046483 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BOP1NT WD40

Protein Analysis

764

Amino Acids

87.15

Weight (kDa)

5.95

Isoelectric Point (pI)

44.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BOP1NT	PF08145	164 - 422	4.3e-100	BOP1NT (NUC169) domain
WD40_CDC20-Fz	PF24807	419 - 496	2.7e-06	CDC20/Fizzy WD40 domain
WD40	PF00400	424 - 460	1e-09	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	425 - 504	1.3e-12	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	427 - 498	4.8e-08	WDR3 first beta-propeller domain
WD40_WDHD1_1st	PF24817	427 - 509	1.2e-10	WDHD1 first WD40 domain
Beta-prop_THOC3	PF25174	428 - 489	1.1e-10	THOC3 beta-propeller domain
WD40_Prp19	PF24814	428 - 491	4.8e-06	Prp19 WD40 domain
Beta-prop_WDR36-Utp21_2nd	PF25168	428 - 489	1.3e-06	WDR36/Utp21 second beta-propeller domain
EIF3I	PF24805	429 - 493	5.8e-09	EIF3I
WD40_Prp19	PF24814	538 - 666	1.1e-06	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	549 - 762	1.1e-12	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	572 - 711	7.7e-08	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	611 - 762	8.6e-09	WDR3 first beta-propeller domain
Beta-prop_EML_2	PF23414	612 - 706	3.3e-07	Echinoderm microtubule-associated protein second beta-propeller
WD40_Prp19	PF24814	616 - 762	5.2e-09	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002914)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40360 AT2G40360
fragaria_vesca	FvH4_5g21650 FvH4_5g21650 FvH4_5g21650
malus_domestica	MD05G1062400.v1.1 MD10G1070100.v1.1
prunus_persica	Prupe.6G114000_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1
pyrus_communis	pycom05g05370 pycom05g05390 pycom10g05570
rosa_chinensis	RchiOBHm_Chr7g0209131 RchiOBHm_Chr7g0241521 RchiOBHm_Chr7g0241531 RchiOBHm_Chr7g0241541
rosa_laevigata	RLG00000000568
rosa_multiflora	Rmu_sc0000821.1_g000025 Rmu_sc0002268.1_g000023
rosa_roxburghii	Rroxscaffold_3G00218950 Rroxscaffold_3G00249700
rosa_rugosa	Rorug07G0109700 Rorug07G0109800 Rorug07G0345000
rosa_samantha	Rh7AG243600 Rh7AG499500 Rh7AG499600 Rh7BG238700 Rh7BG470600 Rh7BG470700 Rh7CG259100 Rh7DG250600 Rh7DG484000 Rh7DG484200
rosa_wichuraiana	Rw7G020660 Rw7G042200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	691, 1631, 1705
AccB7I	CCANNNNNTGG	1 cut(s)	600
AccI	GTMKAC	1 cut(s)	1757
AccIII	TCCGGA	2 cut(s)	232, 1015
AciI	CCGC	3 cut(s)	110, 113, 1075
AclWI	GGATC	5 cut(s)	262, 704, 1173, 1205, 1257
AcoI	YGGCCR	2 cut(s)	363, 2256
AcsI	RAATTY	4 cut(s)	608, 1019, 1976, 2225
AcuI	CTGAAG	5 cut(s)	459, 1244, 1314, 1647, 1785
AcyI	GRCGYC	1 cut(s)	692
AdeI	CACNNNGTG	1 cut(s)	701
AfaI	GTAC	4 cut(s)	44, 1497, 1533, 2112
AfiI	CCNNNNNNNGG	4 cut(s)	486, 600, 911, 1188
AjnI	CCWGG	3 cut(s)	985, 1634, 2243
AjuI	GAANNNNNNNTTGG	4 cut(s)	776, 808, 1966, 1998
Alw21I	GWGCWC	1 cut(s)	339
Alw26I	GTCTC	6 cut(s)	279, 781, 909, 1406, 1483, 1680
AlwI	GGATC	5 cut(s)	262, 704, 1173, 1205, 1257
Aor13HI	TCCGGA	2 cut(s)	232, 1015
AoxI	GGCC	3 cut(s)	363, 1714, 2256
ApeKI	GCWGC	2 cut(s)	170, 2239
ApoI	RAATTY	4 cut(s)	608, 1019, 1976, 2225
AspLEI	GCGC	4 cut(s)	606, 694, 721, 970
AspS9I	GGNCC	1 cut(s)	1996
AsuHPI	GGTGA	8 cut(s)	99, 260, 344, 713, 835, 1882, 1955, 2284
AsuII	TTCGAA	1 cut(s)	1152
AvaII	GGWCC	1 cut(s)	1996
BaeGI	GKGCMC	2 cut(s)	1181, 1634
BalI	TGGCCA	1 cut(s)	365
BanI	GGYRCC	3 cut(s)	691, 1631, 1705
BanII	GRGCYC	1 cut(s)	339
BarI	GAAGNNNNNNTAC	2 cut(s)	546, 578
BbsI	GAAGAC	3 cut(s)	92, 1077, 1653
Bbv12I	GWGCWC	1 cut(s)	339
BbvI	GCAGC	2 cut(s)	182, 2251
BccI	CCATC	7 cut(s)	283, 350, 935, 1355, 1818, 2073, 2195
BceAI	ACGGC	2 cut(s)	1605, 2271
BcgI	CGANNNNNNTGC	2 cut(s)	1701, 1735
BciT130I	CCWGG	3 cut(s)	987, 1636, 2245
BciVI	GTATCC	1 cut(s)	25
BclI	TGATCA	3 cut(s)	370, 1945, 2274
BcoDI	GTCTC	6 cut(s)	279, 781, 909, 1406, 1483, 1680
BfaI	CTAG	2 cut(s)	579, 1280
BfmI	CTRYAG	2 cut(s)	90, 181
BfoI	RGCGCY	2 cut(s)	695, 971
BfuI	GTATCC	1 cut(s)	25
BglII	AGATCT	1 cut(s)	2140
BisI	GCNGC	3 cut(s)	113, 171, 2240
BlsI	GCNGC	3 cut(s)	114, 172, 2241
Bme1390I	CCNGG	3 cut(s)	987, 1636, 2245
Bme18I	GGWCC	1 cut(s)	1996
BmgT120I	GGNCC	1 cut(s)	1996
BmiI	GGNNCC	4 cut(s)	316, 693, 1633, 1707
BmrFI	CCNGG	3 cut(s)	987, 1636, 2245
BmsI	GCATC	5 cut(s)	766, 1036, 1125, 1355, 1684
BpiI	GAAGAC	3 cut(s)	92, 1077, 1653
Bpu14I	TTCGAA	1 cut(s)	1152
BpuEI	CTTGAG	1 cut(s)	1238
Bsa29I	ATCGAT	1 cut(s)	126
BsaAI	YACGTR	3 cut(s)	11, 19, 36
BsaBI	GATNNNNATC	1 cut(s)	1050
BsaHI	GRCGYC	1 cut(s)	692
BsaJI	CCNNGG	5 cut(s)	480, 986, 2182, 2234, 2243
BsaWI	WCCGGW	2 cut(s)	232, 1015
BsaXI	ACNNNNNCTCC	2 cut(s)	1413, 1443
Bsc4I	CCNNNNNNNGG	4 cut(s)	486, 600, 911, 1188
Bse118I	RCCGGY	1 cut(s)	2258
Bse1I	ACTGG	6 cut(s)	33, 825, 1396, 1516, 2029, 2175
Bse3DI	GCAATG	1 cut(s)	1923
Bse8I	GATNNNNATC	1 cut(s)	1050
BseAI	TCCGGA	2 cut(s)	232, 1015
BseBI	CCWGG	3 cut(s)	987, 1636, 2245
BseCI	ATCGAT	1 cut(s)	126
BseDI	CCNNGG	5 cut(s)	480, 986, 2182, 2234, 2243
BseJI	GATNNNNATC	1 cut(s)	1050
BseLI	CCNNNNNNNGG	4 cut(s)	486, 600, 911, 1188
BseMI	GCAATG	1 cut(s)	1923
BseMII	CTCAG	3 cut(s)	1449, 1763, 2211
BseNI	ACTGG	6 cut(s)	33, 825, 1396, 1516, 2029, 2175
BseRI	GAGGAG	5 cut(s)	398, 1002, 1010, 1698, 1909
BseSI	GKGCMC	2 cut(s)	1181, 1634
BseX3I	CGGCCG	1 cut(s)	2256
BseXI	GCAGC	2 cut(s)	182, 2251
Bsh1285I	CGRYCG	2 cut(s)	130, 2259
BshFI	GGCC	3 cut(s)	365, 1716, 2258
BshNI	GGYRCC	3 cut(s)	691, 1631, 1705
BshVI	ATCGAT	1 cut(s)	126
BsiEI	CGRYCG	2 cut(s)	130, 2259
BsiHKAI	GWGCWC	1 cut(s)	339
BsiSI	CCGG	3 cut(s)	233, 1016, 2259
BslFI	GGGAC	1 cut(s)	1500
BslI	CCNNNNNNNGG	4 cut(s)	486, 600, 911, 1188
BsmAI	GTCTC	6 cut(s)	279, 781, 909, 1406, 1483, 1680
BsmBI	CGTCTC	2 cut(s)	781, 909
BsmFI	GGGAC	1 cut(s)	1500
BsmI	GAATGC	1 cut(s)	1138
BsnI	GGCC	3 cut(s)	365, 1716, 2258
Bsp119I	TTCGAA	1 cut(s)	1152
Bsp1286I	GDGCHC	3 cut(s)	339, 1181, 1634
Bsp13I	TCCGGA	2 cut(s)	232, 1015
Bsp1407I	TGTACA	1 cut(s)	2110
BspACI	CCGC	3 cut(s)	110, 113, 1075
BspANI	GGCC	3 cut(s)	365, 1716, 2258
BspCNI	CTCAG	3 cut(s)	1450, 1762, 2210
BspDI	ATCGAT	1 cut(s)	126
BspEI	TCCGGA	2 cut(s)	232, 1015
BspHI	TCATGA	1 cut(s)	409
BspLI	GGNNCC	4 cut(s)	316, 693, 1633, 1707
BspPI	GGATC	5 cut(s)	262, 704, 1173, 1205, 1257
BspT104I	TTCGAA	1 cut(s)	1152
BspT107I	GGYRCC	3 cut(s)	691, 1631, 1705
BsrDI	GCAATG	1 cut(s)	1923
BsrFI	RCCGGY	1 cut(s)	2258
BsrGI	TGTACA	1 cut(s)	2110
BsrI	ACTGG	6 cut(s)	33, 825, 1396, 1516, 2029, 2175
BssAI	RCCGGY	1 cut(s)	2258
BssECI	CCNNGG	5 cut(s)	480, 986, 2182, 2234, 2243
BssNI	GRCGYC	1 cut(s)	692
BssT1I	CCWWGG	2 cut(s)	480, 2234
Bst2UI	CCWGG	3 cut(s)	987, 1636, 2245
Bst4CI	ACNGT	7 cut(s)	701, 765, 1306, 1369, 1657, 1702, 2110
Bst6I	CTCTTC	5 cut(s)	152, 300, 821, 876, 1032
BstACI	GRCGYC	1 cut(s)	692
BstAUI	TGTACA	1 cut(s)	2110
BstBAI	YACGTR	3 cut(s)	11, 19, 36
BstBI	TTCGAA	1 cut(s)	1152
BstC8I	GCNNGC	4 cut(s)	1710, 1714, 1791, 2194
BstDEI	CTNAG	5 cut(s)	262, 1080, 1458, 1749, 2197
BstH2I	RGCGCY	2 cut(s)	695, 971
BstHHI	GCGC	4 cut(s)	606, 694, 721, 970
BstMAI	GTCTC	6 cut(s)	279, 781, 909, 1406, 1483, 1680
BstMCI	CGRYCG	2 cut(s)	130, 2259
BstMWI	GCNNNNNNNGC	1 cut(s)	982
BstNI	CCWGG	3 cut(s)	987, 1636, 2245
BstNSI	RCATGY	1 cut(s)	2094
BstSCI	CCNGG	3 cut(s)	985, 1634, 2243
BstSFI	CTRYAG	2 cut(s)	90, 181
BstSLI	GKGCMC	2 cut(s)	1181, 1634
BstSNI	TACGTA	2 cut(s)	11, 19
BstV1I	GCAGC	2 cut(s)	182, 2251
BstV2I	GAAGAC	3 cut(s)	92, 1077, 1653
BstX2I	RGATCY	4 cut(s)	254, 1165, 1249, 2140
BstYI	RGATCY	4 cut(s)	254, 1165, 1249, 2140
BstZI	CGGCCG	1 cut(s)	2256
Bsu15I	ATCGAT	1 cut(s)	126
BsuI	GTATCC	1 cut(s)	25
BsuRI	GGCC	3 cut(s)	365, 1716, 2258
BsuTUI	ATCGAT	1 cut(s)	126
BtsI	GCAGTG	1 cut(s)	1343
BtsIMutI	CAGTG	7 cut(s)	761, 1343, 1509, 1671, 2036, 2106, 2168
Cac8I	GCNNGC	4 cut(s)	1710, 1714, 1791, 2194
CciI	TCATGA	1 cut(s)	409
CfoI	GCGC	4 cut(s)	606, 694, 721, 970
Cfr10I	RCCGGY	1 cut(s)	2258
Cfr13I	GGNCC	1 cut(s)	1996
ClaI	ATCGAT	1 cut(s)	126
CsiI	ACCWGGT	1 cut(s)	1634
Csp6I	GTAC	4 cut(s)	43, 1496, 1532, 2111
CspCI	CAANNNNNGTGG	2 cut(s)	1765, 1800
CviAII	CATG	8 cut(s)	374, 410, 1625, 1949, 2091, 2123, 2128, 2189
CviQI	GTAC	4 cut(s)	43, 1496, 1532, 2111
DdeI	CTNAG	5 cut(s)	262, 1080, 1458, 1749, 2197
DinI	GGCGCC	1 cut(s)	693
DraI	TTTAAA	1 cut(s)	739
DraIII	CACNNNGTG	1 cut(s)	701
EaeI	YGGCCR	2 cut(s)	363, 2256
EagI	CGGCCG	1 cut(s)	2256
Eam1104I	CTCTTC	5 cut(s)	152, 300, 821, 876, 1032
EarI	CTCTTC	5 cut(s)	152, 300, 821, 876, 1032
Ecl136II	GAGCTC	1 cut(s)	337
EclXI	CGGCCG	1 cut(s)	2256
Eco105I	TACGTA	2 cut(s)	11, 19
Eco130I	CCWWGG	2 cut(s)	480, 2234
Eco24I	GRGCYC	1 cut(s)	339
Eco47I	GGWCC	1 cut(s)	1996
Eco52I	CGGCCG	1 cut(s)	2256
Eco53kI	GAGCTC	1 cut(s)	337
Eco57I	CTGAAG	5 cut(s)	459, 1244, 1314, 1647, 1785
EcoICRI	GAGCTC	1 cut(s)	337
EcoRI	GAATTC	1 cut(s)	1019
EcoRII	CCWGG	3 cut(s)	985, 1634, 2243
EcoT14I	CCWWGG	2 cut(s)	480, 2234
EcoT22I	ATGCAT	1 cut(s)	1740
EcoT38I	GRGCYC	1 cut(s)	339
EgeI	GGCGCC	1 cut(s)	693
EheI	GGCGCC	1 cut(s)	693
ErhI	CCWWGG	2 cut(s)	480, 2234
Esp3I	CGTCTC	2 cut(s)	781, 909
FaeI	CATG	8 cut(s)	377, 413, 1628, 1952, 2094, 2126, 2131, 2192
FalI	AAGNNNNNCTT	6 cut(s)	1133, 1165, 1482, 1514, 1539, 1571
FaqI	GGGAC	1 cut(s)	1500
FatI	CATG	8 cut(s)	373, 409, 1624, 1948, 2090, 2122, 2127, 2188
FauNDI	CATATG	3 cut(s)	715, 1126, 1435
FbaI	TGATCA	3 cut(s)	370, 1945, 2274
FblI	GTMKAC	1 cut(s)	1757
Fnu4HI	GCNGC	3 cut(s)	113, 171, 2240
FriOI	GRGCYC	1 cut(s)	339
Fsp4HI	GCNGC	3 cut(s)	113, 171, 2240
FspBI	CTAG	2 cut(s)	579, 1280
GlaI	GCGC	4 cut(s)	605, 693, 720, 969
GluI	GCNGC	3 cut(s)	113, 171, 2240
HaeII	RGCGCY	2 cut(s)	695, 971
HaeIII	GGCC	3 cut(s)	365, 1716, 2258
HapII	CCGG	3 cut(s)	233, 1016, 2259
HhaI	GCGC	4 cut(s)	606, 694, 721, 970
Hin1I	GRCGYC	1 cut(s)	692
Hin1II	CATG	8 cut(s)	377, 413, 1628, 1952, 2094, 2126, 2131, 2192
Hin6I	GCGC	4 cut(s)	604, 692, 719, 968
HinP1I	GCGC	4 cut(s)	604, 692, 719, 968
HindIII	AAGCTT	2 cut(s)	1326, 1892
HpaII	CCGG	3 cut(s)	233, 1016, 2259
HphI	GGTGA	8 cut(s)	99, 260, 344, 713, 835, 1882, 1955, 2284
Hpy166II	GTNNAC	5 cut(s)	134, 818, 1101, 1758, 2253
Hpy8I	GTNNAC	5 cut(s)	134, 818, 1101, 1758, 2253
HpyCH4III	ACNGT	7 cut(s)	701, 765, 1306, 1369, 1657, 1702, 2110
HpyCH4IV	ACGT	4 cut(s)	10, 18, 35, 1198
HpyCH4V	TGCA	9 cut(s)	1124, 1346, 1738, 1793, 1928, 2087, 2106, 2192, 2223
HpyF10VI	GCNNNNNNNGC	1 cut(s)	982
HpyF3I	CTNAG	5 cut(s)	262, 1080, 1458, 1749, 2197
HpySE526I	ACGT	4 cut(s)	10, 18, 35, 1198
Hsp92I	GRCGYC	1 cut(s)	692
Hsp92II	CATG	8 cut(s)	377, 413, 1628, 1952, 2094, 2126, 2131, 2192
HspAI	GCGC	4 cut(s)	604, 692, 719, 968
KasI	GGCGCC	1 cut(s)	691
Kpn2I	TCCGGA	2 cut(s)	232, 1015
Ksp22I	TGATCA	3 cut(s)	370, 1945, 2274
LmnI	GCTCC	5 cut(s)	212, 235, 457, 1826, 1962
Lsp1109I	GCAGC	2 cut(s)	182, 2251
LweI	GCATC	5 cut(s)	766, 1036, 1125, 1355, 1684
MabI	ACCWGGT	1 cut(s)	1634
MaeI	CTAG	2 cut(s)	579, 1280
MaeII	ACGT	4 cut(s)	10, 18, 35, 1198
MaeIII	GTNAC	6 cut(s)	643, 701, 1292, 1306, 1429, 1795
MfeI	CAATTG	1 cut(s)	465
MflI	RGATCY	4 cut(s)	254, 1165, 1249, 2140
MhlI	GDGCHC	3 cut(s)	339, 1181, 1634
MlsI	TGGCCA	1 cut(s)	365
MluNI	TGGCCA	1 cut(s)	365
Mly113I	GGCGCC	1 cut(s)	692
MlyI	GAGTC	5 cut(s)	287, 743, 914, 1007, 2261
Mox20I	TGGCCA	1 cut(s)	365
Mph1103I	ATGCAT	1 cut(s)	1740
MroI	TCCGGA	2 cut(s)	232, 1015
MscI	TGGCCA	1 cut(s)	365
MslI	CAYNNNNRTG	1 cut(s)	378
Msp20I	TGGCCA	1 cut(s)	365
MspI	CCGG	3 cut(s)	233, 1016, 2259
MspR9I	CCNGG	3 cut(s)	987, 1636, 2245
MunI	CAATTG	1 cut(s)	465
Mva1269I	GAATGC	1 cut(s)	1138
MvaI	CCWGG	3 cut(s)	987, 1636, 2245
MwoI	GCNNNNNNNGC	1 cut(s)	982
NarI	GGCGCC	1 cut(s)	692
NdeI	CATATG	3 cut(s)	715, 1126, 1435
NlaIII	CATG	8 cut(s)	377, 413, 1628, 1952, 2094, 2126, 2131, 2192
NlaIV	GGNNCC	4 cut(s)	316, 693, 1633, 1707
NmuCI	GTSAC	4 cut(s)	643, 701, 1292, 1429
NsiI	ATGCAT	1 cut(s)	1740
NspI	RCATGY	1 cut(s)	2094
NspV	TTCGAA	1 cut(s)	1152
PacI	TTAATTAA	1 cut(s)	861
PagI	TCATGA	1 cut(s)	409
PcsI	WCGNNNNNNNCGW	1 cut(s)	1195
PctI	GAATGC	1 cut(s)	1138
PfeI	GAWTC	6 cut(s)	431, 590, 792, 1217, 1447, 1609
PflFI	GACNNNGTC	1 cut(s)	1657
PflMI	CCANNNNNTGG	1 cut(s)	600
PkrI	GCNGC	3 cut(s)	114, 172, 2241
Ple19I	CGATCG	1 cut(s)	130
PleI	GAGTC	5 cut(s)	287, 743, 914, 1006, 2261
PluTI	GGCGCC	1 cut(s)	695
PpsI	GAGTC	5 cut(s)	287, 743, 914, 1006, 2261
Ppu21I	YACGTR	3 cut(s)	11, 19, 36
Psp124BI	GAGCTC	1 cut(s)	339
Psp6I	CCWGG	3 cut(s)	985, 1634, 2243
PspGI	CCWGG	3 cut(s)	985, 1634, 2243
PspN4I	GGNNCC	4 cut(s)	316, 693, 1633, 1707
PspPI	GGNCC	1 cut(s)	1996
PsuI	RGATCY	4 cut(s)	254, 1165, 1249, 2140
PsyI	GACNNNGTC	1 cut(s)	1657
PvuI	CGATCG	1 cut(s)	130
RsaI	GTAC	4 cut(s)	44, 1497, 1533, 2112
RsaNI	GTAC	4 cut(s)	43, 1496, 1532, 2111
RseI	CAYNNNNRTG	1 cut(s)	378
SacI	GAGCTC	1 cut(s)	339
SatI	GCNGC	3 cut(s)	113, 171, 2240
Sau96I	GGNCC	1 cut(s)	1996
SchI	GAGTC	5 cut(s)	287, 743, 914, 1007, 2261
ScrFI	CCNGG	3 cut(s)	987, 1636, 2245
SduI	GDGCHC	3 cut(s)	339, 1181, 1634
SexAI	ACCWGGT	1 cut(s)	1634
SfaNI	GCATC	5 cut(s)	766, 1036, 1125, 1355, 1684
SfcI	CTRYAG	2 cut(s)	90, 181
SfoI	GGCGCC	1 cut(s)	693
SfuI	TTCGAA	1 cut(s)	1152
SinI	GGWCC	1 cut(s)	1996
SmiMI	CAYNNNNRTG	1 cut(s)	378
SmlI	CTYRAG	1 cut(s)	1253
SmoI	CTYRAG	1 cut(s)	1253
SnaBI	TACGTA	2 cut(s)	11, 19
SsiI	CCGC	3 cut(s)	110, 113, 1075
SspDI	GGCGCC	1 cut(s)	691
SspI	AATATT	1 cut(s)	1207
SspMI	CTAG	2 cut(s)	579, 1280
SstI	GAGCTC	1 cut(s)	339
StyD4I	CCNGG	3 cut(s)	985, 1634, 2243
StyI	CCWWGG	2 cut(s)	480, 2234
TaaI	ACNGT	7 cut(s)	701, 765, 1306, 1369, 1657, 1702, 2110
TaiI	ACGT	4 cut(s)	13, 21, 38, 1201
TaqI	TCGA	5 cut(s)	97, 126, 420, 1152, 1721
TatI	WGTACW	3 cut(s)	1495, 1531, 2110
TauI	GCSGC	1 cut(s)	115
TfiI	GAWTC	6 cut(s)	431, 590, 792, 1217, 1447, 1609
TscAI	CASTG	7 cut(s)	768, 1343, 1516, 1671, 2036, 2113, 2175
TseFI	GTSAC	4 cut(s)	643, 701, 1292, 1429
TseI	GCWGC	2 cut(s)	170, 2239
Tsp45I	GTSAC	4 cut(s)	643, 701, 1292, 1429
TspGWI	ACGGA	3 cut(s)	947, 1456, 2067
TspRI	CASTG	7 cut(s)	768, 1343, 1516, 1671, 2036, 2113, 2175
Tth111I	GACNNNGTC	1 cut(s)	1657
Van91I	CCANNNNNTGG	1 cut(s)	600
VpaK11BI	GGWCC	1 cut(s)	1996
XapI	RAATTY	4 cut(s)	608, 1019, 1976, 2225
XbaI	TCTAGA	1 cut(s)	1279
XceI	RCATGY	1 cut(s)	2094
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2241
XmiI	GTMKAC	1 cut(s)	1757
XspI	CTAG	2 cut(s)	579, 1280
Zsp2I	ATGCAT	1 cut(s)	1740

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.