Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0002914

Physical Location & Seq

Genomic Coordinates Forward (+)

13066645 .. 13072475

Gene Structure 5831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g21650.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

ATGAAGGCTAAGAAGAAGAGCTCTCTTCCAGCAGACTCGGCGAAAGAGCAACAGAAGAAGCAAAAGGGGAAGGGGAAGATGAAGGTGAAGATTCCCGAGGCGAAACAGGAGCAACAGAAACCGGAGGAGGAAGTTGACACTGATTCTGTTTACGATTCCGGAGCTGAAGATGAGTGGACTCCGTCAAATCTTGAGGATATGTCTGGTAGTGAAGGATCTGACTCAGAGGATTCTCCATCAATCAGAGACACAGACTCAGAAGATGAAGAGAGAGGTTCCTCCGAAAATGAGGGTGAGCTCAACCCCAGCGTAAATGATGGTTTGGACATTGATCATGGTAATGAGGAGGAAAGTGATAGTTCTGGACTGCATGAAGAAGTCGAAGAAAGTGATTCATCTGAAGATGAGGTTGCTCCTCGAAATACAATTGGGGCTGTTCCCTTGGAGTGGTATCGGGATGAGAAACATATTGGTTATGATATCACGGGGAAGAAGATTAAAAAGAAGGAAAGAGAAGATAAATTGCAATCCTTTCTTGCTAGCGCTGATGATTCCAAAAATTGGCGCAAATTTTTGGATGAATACAATGATGAGGAAGTAGAAGTGACAAAGGAAGATATTAAAACCATAAATAGATTACTTGAAGGAAAGGCGCCACATGGGGACTTTGATCCATATGCGCCTTATGTTGACTGGTTTAAATGGGATGACTCAAAGCATCCACTGTCAAATGCCCCTGAACCCAAGAGACGATTCATTCCTTCAAAATCTGAAAGTAAACTGGTGAAGAGGTTAGTATTAGCAATTCGGAAGGGTTTAATTAAGCCTAGAAAGGACGAAGAAGAGGAAGAAGAAAATGTTTATCCCTTGTGGGGAGACGACTCTAATTCAACAGAAAAGGACGGTAGCCATTTATCTTACATTCCAGCGCCAAAGCCAAAATTGCCAGGGTATGAGGAGTCCTTCAATCCTCCTCCAGAATTCATCCCGACACAAGAAGAGATTGATGCTTATCAGTTAATGTATGAGGAAGACCGCCCTAAGTTTATACCGAAAAGGTTTACATCTATGAGAAGCATCCCTGCATATGAGAATGCTATTAAGGAGTGCTTCGAAAGATGTTTGGATCTATACTTGTGCCCCAGAGTTCGTAAGAAACGTATCAATATTGATCCCGAATCTCTGAAGCCCAAGCTACCAAGTCGAAAGGATCTCAAGCCATATCCTGTGAAATGTTATCTACAGTATAAAGGTCACAAAGATAGAGTTACATCAGTTTCCACAGAAGTTTCAGGGCAGTGGATTGCATCAGGTTCATTGGATGGAACTGTGCGTATTTGGGAGGTTGAAACTGGTCGATGCCTCAAACTCTGGGAGATTGGGGAAGCTGTCACACATGTAGCTTGGAATCCCAATCCTGATTATTCCGTACTGGCTATCTCTGTGGGACATGATGTACTTATTCTCAACACTGGTTTTGGGAATGAAGAAGTACAGCAAAAAACTAAAGAACTTCTTTCTGCGGAAGCACCTACCACAGCAGATGACAAGGCTACCTTCGTGAACTGGATTCAAGATGAAACACATAACGGCACAAGGTTAAGACATTTTAAGACTGTGTCTTCAGTGGAATGGCATCGTAGAGGAGACTACTTTTCAACTGTGGTGCCAGCAGGCCAATCAAAATCAATTTTTATGCATAGGCTCTCTCAGAAGTCTACCCAGACATTTTCTATCAAGTTGGGCGGGCTTGCAGTTACTTCAGTTTTCCATCCTGTTCGCTCCCACATCTTCATCTCTACAAAGAAAACTATTCGCCAATATGATTTGGTGAAGGGAAAGCAAATCAGAAAGCTTGATACTGGACTAAAAGAAATCTCCTCCATTGCAATTCATCCTTCTGGTGATCATGTAATTGTTGGTAGCAGAGAAGGAAAATTTTGTTGGTTTGACATGGACCTTTCAACTAAAAAACCTTACCTCATTCGCCAGTGGCATAAGAAGGACATCAACAATGTGGCTTACCATCGTTTGTACCCGTTGTTTGCAACATGCTCTGATGATTGCACTGTACAAGTTTCTCATGGCATGGTTTATTCAGATCTTAACCAGAACCCTCTTATAGTTCCACTGGAAATACTCCGAGGTCATGCAAGCTCAGATGGGAGAGGTGTAATGGATTGTAAATTCCACCCAAGGCAGCCCTGGTTATTCACTGCCGGAGCTGACTCGGTGATCAGACTTTACTGCGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030684 GO:0030686 GO:0030687 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043021 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044877 GO:0046483 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BOP1NT WD40

Protein Analysis

752

Amino Acids

85.59

Weight (kDa)

5.59

Isoelectric Point (pI)

47.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BOP1NT	PF08145	151 - 409	1.2e-100	BOP1NT (NUC169) domain
WD40	PF00400	411 - 447	2.6e-09	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	411 - 489	9.7e-13	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	412 - 487	1.2e-07	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	413 - 473	4.1e-10	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	414 - 497	4.4e-10	WDHD1 first WD40 domain
WD40_Prp19	PF24814	415 - 479	3.9e-06	Prp19 WD40 domain
Beta-prop_WDR36-Utp21_2nd	PF25168	415 - 476	3e-07	WDR36/Utp21 second beta-propeller domain
EIF3I	PF24805	416 - 525	2e-08	EIF3I
WD40_Prp19	PF24814	512 - 653	2.6e-07	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	536 - 749	4.4e-14	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	559 - 698	1.3e-07	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	598 - 749	3.2e-09	WDR3 first beta-propeller domain
Beta-prop_EML_2	PF23414	599 - 693	5.4e-08	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5	PF25175	624 - 749	9.1e-08	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0002914)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40360 AT2G40360
fragaria_vesca	FvH4_5g21650 FvH4_5g21650 FvH4_5g21650
malus_domestica	MD05G1062400.v1.1 MD10G1070100.v1.1
prunus_persica	Prupe.6G114000_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1
pyrus_communis	pycom05g05370 pycom05g05390 pycom10g05570
rosa_chinensis	RchiOBHm_Chr7g0209131 RchiOBHm_Chr7g0241521 RchiOBHm_Chr7g0241531 RchiOBHm_Chr7g0241541
rosa_laevigata	RLG00000000568
rosa_multiflora	Rmu_sc0000821.1_g000025 Rmu_sc0002268.1_g000023
rosa_roxburghii	Rroxscaffold_3G00218950 Rroxscaffold_3G00249700
rosa_rugosa	Rorug07G0109700 Rorug07G0109800 Rorug07G0345000
rosa_samantha	Rh7AG243600 Rh7AG499500 Rh7AG499600 Rh7BG238700 Rh7BG470600 Rh7BG470700 Rh7CG259100 Rh7DG250600 Rh7DG484000 Rh7DG484200
rosa_wichuraiana	Rw7G020660 Rw7G042200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	652, 1666
AccB7I	CCANNNNNTGG	1 cut(s)	561
AccI	GTMKAC	1 cut(s)	1718
AccIII	TCCGGA	1 cut(s)	158
AciI	CCGC	3 cut(s)	1036, 1523, 1746
AclWI	GGATC	5 cut(s)	223, 665, 1134, 1166, 1218
AcsI	RAATTY	4 cut(s)	569, 980, 1937, 2186
AcuI	CTGAAG	5 cut(s)	186, 420, 1205, 1608, 1746
AcyI	GRCGYC	1 cut(s)	653
AfaI	GTAC	5 cut(s)	1431, 1458, 1494, 2036, 2073
AfeI	AGCGCT	1 cut(s)	544
AfiI	CCNNNNNNNGG	3 cut(s)	447, 561, 872
AflIII	ACRYGT	1 cut(s)	1396
AgsI	TTSAA	8 cut(s)	644, 765, 891, 967, 1349, 1574, 1659, 1965
AjnI	CCWGG	2 cut(s)	946, 2204
AjuI	GAANNNNNNNTTGG	4 cut(s)	737, 769, 1927, 1959
AluBI	AGCT	9 cut(s)	21, 164, 298, 1195, 1388, 1403, 1855, 2157, 2225
AluI	AGCT	9 cut(s)	21, 164, 298, 1195, 1388, 1403, 1855, 2157, 2225
Alw21I	GWGCWC	2 cut(s)	23, 300
Alw26I	GTCTC	4 cut(s)	240, 742, 870, 1641
AlwI	GGATC	5 cut(s)	223, 665, 1134, 1166, 1218
Ama87I	CYCGRG	1 cut(s)	95
Aor13HI	TCCGGA	1 cut(s)	158
Aor51HI	AGCGCT	1 cut(s)	544
AoxI	GGCC	1 cut(s)	1675
ApeKI	GCWGC	1 cut(s)	2200
ApoI	RAATTY	4 cut(s)	569, 980, 1937, 2186
AspLEI	GCGC	5 cut(s)	545, 567, 655, 682, 931
AspS9I	GGNCC	1 cut(s)	1957
AsuHPI	GGTGA	6 cut(s)	97, 305, 796, 1843, 1916, 2245
AsuII	TTCGAA	1 cut(s)	1113
AsuNHI	GCTAGC	1 cut(s)	539
AvaI	CYCGRG	1 cut(s)	95
AvaII	GGWCC	1 cut(s)	1957
BaeGI	GKGCMC	1 cut(s)	1142
BanI	GGYRCC	2 cut(s)	652, 1666
BanII	GRGCYC	2 cut(s)	23, 300
BbsI	GAAGAC	2 cut(s)	1038, 1614
Bbv12I	GWGCWC	2 cut(s)	23, 300
BbvI	GCAGC	1 cut(s)	2212
BccI	CCATC	6 cut(s)	244, 311, 1316, 1779, 2034, 2156
BceAI	ACGGC	1 cut(s)	1606
BciT130I	CCWGG	2 cut(s)	948, 2206
BclI	TGATCA	3 cut(s)	331, 1906, 2235
BcoDI	GTCTC	4 cut(s)	240, 742, 870, 1641
BfaI	CTAG	2 cut(s)	540, 828
BfmI	CTRYAG	1 cut(s)	1241
BfoI	RGCGCY	3 cut(s)	546, 656, 932
BglII	AGATCT	1 cut(s)	2101
BisI	GCNGC	1 cut(s)	2201
BlsI	GCNGC	1 cut(s)	2202
Bme1390I	CCNGG	2 cut(s)	948, 2206
Bme18I	GGWCC	1 cut(s)	1957
BmeT110I	CYCGRG	1 cut(s)	95
BmgT120I	GGNCC	1 cut(s)	1957
BmiI	GGNNCC	3 cut(s)	277, 654, 1668
BmrFI	CCNGG	2 cut(s)	948, 2206
BmsI	GCATC	6 cut(s)	727, 997, 1086, 1316, 1349, 1645
BmtI	GCTAGC	1 cut(s)	543
BpiI	GAAGAC	2 cut(s)	1038, 1614
BpmI	CTGGAG	1 cut(s)	960
Bpu14I	TTCGAA	1 cut(s)	1113
BpuEI	CTTGAG	2 cut(s)	212, 1199
BsaBI	GATNNNNATC	1 cut(s)	1011
BsaHI	GRCGYC	1 cut(s)	653
BsaJI	CCNNGG	6 cut(s)	96, 441, 947, 2143, 2195, 2204
BsaWI	WCCGGW	2 cut(s)	121, 158
Bsc4I	CCNNNNNNNGG	3 cut(s)	447, 561, 872
Bse1I	ACTGG	9 cut(s)	698, 786, 1357, 1437, 1477, 1571, 1867, 1990, 2136
Bse3DI	GCAATG	1 cut(s)	1884
Bse8I	GATNNNNATC	1 cut(s)	1011
BseAI	TCCGGA	1 cut(s)	158
BseBI	CCWGG	2 cut(s)	948, 2206
BseDI	CCNNGG	6 cut(s)	96, 441, 947, 2143, 2195, 2204
BseGI	GGATG	9 cut(s)	463, 583, 712, 718, 984, 1077, 1327, 1771, 1894
BseJI	GATNNNNATC	1 cut(s)	1011
BseLI	CCNNNNNNNGG	3 cut(s)	447, 561, 872
BseMI	GCAATG	1 cut(s)	1884
BseMII	CTCAG	4 cut(s)	237, 270, 1724, 2172
BseNI	ACTGG	9 cut(s)	698, 786, 1357, 1437, 1477, 1571, 1867, 1990, 2136
BseRI	GAGGAG	7 cut(s)	140, 359, 405, 963, 971, 1659, 1870
BseSI	GKGCMC	1 cut(s)	1142
BseXI	GCAGC	1 cut(s)	2212
BseYI	CCCAGC	1 cut(s)	305
BshFI	GGCC	1 cut(s)	1677
BshNI	GGYRCC	2 cut(s)	652, 1666
BsiHKAI	GWGCWC	2 cut(s)	23, 300
BsiHKCI	CYCGRG	1 cut(s)	95
BsiSI	CCGG	3 cut(s)	122, 159, 2220
BslFI	GGGAC	2 cut(s)	677, 1461
BslI	CCNNNNNNNGG	3 cut(s)	447, 561, 872
BsmAI	GTCTC	4 cut(s)	240, 742, 870, 1641
BsmBI	CGTCTC	2 cut(s)	742, 870
BsmFI	GGGAC	2 cut(s)	677, 1461
BsmI	GAATGC	1 cut(s)	1099
BsnI	GGCC	1 cut(s)	1677
BsoBI	CYCGRG	1 cut(s)	95
Bsp119I	TTCGAA	1 cut(s)	1113
Bsp1286I	GDGCHC	3 cut(s)	23, 300, 1142
Bsp13I	TCCGGA	1 cut(s)	158
Bsp1407I	TGTACA	1 cut(s)	2071
Bsp143I	GATC	9 cut(s)	215, 331, 670, 1126, 1171, 1210, 1906, 2101, 2235
BspACI	CCGC	3 cut(s)	1036, 1523, 1746
BspANI	GGCC	1 cut(s)	1677
BspCNI	CTCAG	4 cut(s)	236, 269, 1723, 2171
BspEI	TCCGGA	1 cut(s)	158
BspLI	GGNNCC	3 cut(s)	277, 654, 1668
BspOI	GCTAGC	1 cut(s)	543
BspPI	GGATC	5 cut(s)	223, 665, 1134, 1166, 1218
BspQI	GCTCTTC	1 cut(s)	11
BspT104I	TTCGAA	1 cut(s)	1113
BspT107I	GGYRCC	2 cut(s)	652, 1666
BsrDI	GCAATG	1 cut(s)	1884
BsrGI	TGTACA	1 cut(s)	2071
BsrI	ACTGG	9 cut(s)	698, 786, 1357, 1437, 1477, 1571, 1867, 1990, 2136
BssECI	CCNNGG	6 cut(s)	96, 441, 947, 2143, 2195, 2204
BssMI	GATC	9 cut(s)	215, 331, 670, 1126, 1171, 1210, 1906, 2101, 2235
BssNI	GRCGYC	1 cut(s)	653
BssT1I	CCWWGG	2 cut(s)	441, 2195
Bst2UI	CCWGG	2 cut(s)	948, 2206
Bst4CI	ACNGT	7 cut(s)	726, 905, 1245, 1330, 1618, 1663, 2071
Bst6I	CTCTTC	6 cut(s)	11, 30, 261, 782, 837, 993
BstACI	GRCGYC	1 cut(s)	653
BstAUI	TGTACA	1 cut(s)	2071
BstBI	TTCGAA	1 cut(s)	1113
BstC8I	GCNNGC	6 cut(s)	541, 1671, 1675, 1748, 1752, 2155
BstDEI	CTNAG	6 cut(s)	9, 223, 256, 1041, 1710, 2158
BstF5I	GGATG	9 cut(s)	463, 583, 712, 718, 984, 1077, 1327, 1771, 1894
BstH2I	RGCGCY	3 cut(s)	546, 656, 932
BstHHI	GCGC	5 cut(s)	545, 567, 655, 682, 931
BstKTI	GATC	9 cut(s)	218, 334, 673, 1129, 1174, 1213, 1909, 2104, 2238
BstMAI	GTCTC	4 cut(s)	240, 742, 870, 1641
BstMBI	GATC	9 cut(s)	215, 331, 670, 1126, 1171, 1210, 1906, 2101, 2235
BstMWI	GCNNNNNNNGC	2 cut(s)	38, 943
BstNI	CCWGG	2 cut(s)	948, 2206
BstNSI	RCATGY	2 cut(s)	1400, 2055
BstSCI	CCNGG	2 cut(s)	946, 2204
BstSFI	CTRYAG	1 cut(s)	1241
BstSLI	GKGCMC	1 cut(s)	1142
BstV1I	GCAGC	1 cut(s)	2212
BstV2I	GAAGAC	2 cut(s)	1038, 1614
BstX2I	RGATCY	4 cut(s)	215, 1126, 1210, 2101
BstYI	RGATCY	4 cut(s)	215, 1126, 1210, 2101
BsuRI	GGCC	1 cut(s)	1677
BtsCI	GGATG	9 cut(s)	463, 583, 712, 718, 984, 1077, 1327, 1771, 1894
BtsI	GCAGTG	2 cut(s)	1304, 2214
BtsIMutI	CAGTG	9 cut(s)	138, 722, 1304, 1470, 1632, 1997, 2067, 2129, 2214
Cac8I	GCNNGC	6 cut(s)	541, 1671, 1675, 1748, 1752, 2155
CfoI	GCGC	5 cut(s)	545, 567, 655, 682, 931
Cfr13I	GGNCC	1 cut(s)	1957
Csp6I	GTAC	5 cut(s)	1430, 1457, 1493, 2035, 2072
CviQI	GTAC	5 cut(s)	1430, 1457, 1493, 2035, 2072
DdeI	CTNAG	6 cut(s)	9, 223, 256, 1041, 1710, 2158
DinI	GGCGCC	1 cut(s)	654
DpnI	GATC	9 cut(s)	217, 333, 672, 1128, 1173, 1212, 1908, 2103, 2237
DpnII	GATC	9 cut(s)	215, 331, 670, 1126, 1171, 1210, 1906, 2101, 2235
DraI	TTTAAA	1 cut(s)	700
Eam1104I	CTCTTC	6 cut(s)	11, 30, 261, 782, 837, 993
EarI	CTCTTC	6 cut(s)	11, 30, 261, 782, 837, 993
Ecl136II	GAGCTC	2 cut(s)	21, 298
Eco130I	CCWWGG	2 cut(s)	441, 2195
Eco24I	GRGCYC	2 cut(s)	23, 300
Eco32I	GATATC	1 cut(s)	481
Eco47I	GGWCC	1 cut(s)	1957
Eco47III	AGCGCT	1 cut(s)	544
Eco53kI	GAGCTC	2 cut(s)	21, 298
Eco57I	CTGAAG	5 cut(s)	186, 420, 1205, 1608, 1746
Eco88I	CYCGRG	1 cut(s)	95
EcoICRI	GAGCTC	2 cut(s)	21, 298
EcoRI	GAATTC	1 cut(s)	980
EcoRII	CCWGG	2 cut(s)	946, 2204
EcoRV	GATATC	1 cut(s)	481
EcoT14I	CCWWGG	2 cut(s)	441, 2195
EcoT22I	ATGCAT	1 cut(s)	1701
EcoT38I	GRGCYC	2 cut(s)	23, 300
EgeI	GGCGCC	1 cut(s)	654
EheI	GGCGCC	1 cut(s)	654
ErhI	CCWWGG	2 cut(s)	441, 2195
Esp3I	CGTCTC	2 cut(s)	742, 870
FalI	AAGNNNNNCTT	6 cut(s)	1094, 1126, 1500, 1532, 1541, 1573
FaqI	GGGAC	2 cut(s)	677, 1461
FauI	CCCGC	1 cut(s)	1739
FauNDI	CATATG	2 cut(s)	676, 1087
FbaI	TGATCA	3 cut(s)	331, 1906, 2235
FblI	GTMKAC	1 cut(s)	1718
Fnu4HI	GCNGC	1 cut(s)	2201
FokI	GGATG	9 cut(s)	470, 590, 705, 719, 971, 1064, 1334, 1758, 1881
FriOI	GRGCYC	2 cut(s)	23, 300
Fsp4HI	GCNGC	1 cut(s)	2201
FspBI	CTAG	2 cut(s)	540, 828
GlaI	GCGC	5 cut(s)	544, 566, 654, 681, 930
GluI	GCNGC	1 cut(s)	2201
GsaI	CCCAGC	1 cut(s)	309
GsuI	CTGGAG	1 cut(s)	960
HaeII	RGCGCY	3 cut(s)	546, 656, 932
HaeIII	GGCC	1 cut(s)	1677
HapII	CCGG	3 cut(s)	122, 159, 2220
HhaI	GCGC	5 cut(s)	545, 567, 655, 682, 931
Hin1I	GRCGYC	1 cut(s)	653
Hin6I	GCGC	5 cut(s)	543, 565, 653, 680, 929
HinP1I	GCGC	5 cut(s)	543, 565, 653, 680, 929
HincII	GTYRAC	2 cut(s)	136, 691
HindII	GTYRAC	2 cut(s)	136, 691
HindIII	AAGCTT	1 cut(s)	1853
HpaII	CCGG	3 cut(s)	122, 159, 2220
HphI	GGTGA	6 cut(s)	97, 305, 796, 1843, 1916, 2245
Hpy166II	GTNNAC	8 cut(s)	136, 151, 177, 691, 779, 1062, 1564, 1719
Hpy8I	GTNNAC	8 cut(s)	136, 151, 177, 691, 779, 1062, 1564, 1719
HpyCH4III	ACNGT	7 cut(s)	726, 905, 1245, 1330, 1618, 1663, 2071
HpyCH4IV	ACGT	1 cut(s)	1159
HpyF10VI	GCNNNNNNNGC	2 cut(s)	38, 943
HpyF3I	CTNAG	6 cut(s)	9, 223, 256, 1041, 1710, 2158
HpySE526I	ACGT	1 cut(s)	1159
Hsp92I	GRCGYC	1 cut(s)	653
HspAI	GCGC	5 cut(s)	543, 565, 653, 680, 929
KasI	GGCGCC	1 cut(s)	652
Kpn2I	TCCGGA	1 cut(s)	158
Ksp22I	TGATCA	3 cut(s)	331, 1906, 2235
Kzo9I	GATC	9 cut(s)	215, 331, 670, 1126, 1171, 1210, 1906, 2101, 2235
LguI	GCTCTTC	1 cut(s)	11
LmnI	GCTCC	5 cut(s)	109, 161, 418, 1787, 2222
Lsp1109I	GCAGC	1 cut(s)	2212
LweI	GCATC	6 cut(s)	727, 997, 1086, 1316, 1349, 1645
MaeI	CTAG	2 cut(s)	540, 828
MaeII	ACGT	1 cut(s)	1159
MaeIII	GTNAC	5 cut(s)	604, 1253, 1267, 1390, 1756
MalI	GATC	9 cut(s)	217, 333, 672, 1128, 1173, 1212, 1908, 2103, 2237
MboI	GATC	9 cut(s)	215, 331, 670, 1126, 1171, 1210, 1906, 2101, 2235
MfeI	CAATTG	1 cut(s)	426
MflI	RGATCY	4 cut(s)	215, 1126, 1210, 2101
MhlI	GDGCHC	3 cut(s)	23, 300, 1142
Mly113I	GGCGCC	1 cut(s)	653
MlyI	GAGTC	8 cut(s)	29, 172, 215, 248, 704, 875, 968, 2222
Mph1103I	ATGCAT	1 cut(s)	1701
MroI	TCCGGA	1 cut(s)	158
MslI	CAYNNNNRTG	1 cut(s)	339
MspI	CCGG	3 cut(s)	122, 159, 2220
MspR9I	CCNGG	2 cut(s)	948, 2206
MunI	CAATTG	1 cut(s)	426
Mva1269I	GAATGC	1 cut(s)	1099
MvaI	CCWGG	2 cut(s)	948, 2206
MwoI	GCNNNNNNNGC	2 cut(s)	38, 943
NarI	GGCGCC	1 cut(s)	653
NdeI	CATATG	2 cut(s)	676, 1087
NdeII	GATC	9 cut(s)	215, 331, 670, 1126, 1171, 1210, 1906, 2101, 2235
NheI	GCTAGC	1 cut(s)	539
NlaIV	GGNNCC	3 cut(s)	277, 654, 1668
NmeAIII	GCCGAG	1 cut(s)	17
NmuCI	GTSAC	3 cut(s)	604, 1253, 1390
NsiI	ATGCAT	1 cut(s)	1701
NspI	RCATGY	2 cut(s)	1400, 2055
NspV	TTCGAA	1 cut(s)	1113
PacI	TTAATTAA	1 cut(s)	822
PciI	ACATGT	1 cut(s)	1396
PciSI	GCTCTTC	1 cut(s)	11
PcsI	WCGNNNNNNNCGW	1 cut(s)	1156
PctI	GAATGC	1 cut(s)	1099
PflFI	GACNNNGTC	2 cut(s)	181, 1618
PflMI	CCANNNNNTGG	1 cut(s)	561
PkrI	GCNGC	1 cut(s)	2202
PleI	GAGTC	8 cut(s)	29, 172, 215, 248, 704, 875, 967, 2222
PluTI	GGCGCC	1 cut(s)	656
PpsI	GAGTC	8 cut(s)	29, 172, 215, 248, 704, 875, 967, 2222
PscI	ACATGT	1 cut(s)	1396
Psp124BI	GAGCTC	2 cut(s)	23, 300
Psp6I	CCWGG	2 cut(s)	946, 2204
PspFI	CCCAGC	1 cut(s)	305
PspGI	CCWGG	2 cut(s)	946, 2204
PspN4I	GGNNCC	3 cut(s)	277, 654, 1668
PspPI	GGNCC	1 cut(s)	1957
PsuI	RGATCY	4 cut(s)	215, 1126, 1210, 2101
PsyI	GACNNNGTC	2 cut(s)	181, 1618
RsaI	GTAC	5 cut(s)	1431, 1458, 1494, 2036, 2073
RsaNI	GTAC	5 cut(s)	1430, 1457, 1493, 2035, 2072
RseI	CAYNNNNRTG	1 cut(s)	339
SacI	GAGCTC	2 cut(s)	23, 300
SapI	GCTCTTC	1 cut(s)	11
SatI	GCNGC	1 cut(s)	2201
Sau3AI	GATC	9 cut(s)	215, 331, 670, 1126, 1171, 1210, 1906, 2101, 2235
Sau96I	GGNCC	1 cut(s)	1957
SchI	GAGTC	8 cut(s)	29, 172, 215, 248, 704, 875, 968, 2222
ScrFI	CCNGG	2 cut(s)	948, 2206
SduI	GDGCHC	3 cut(s)	23, 300, 1142
SfaNI	GCATC	6 cut(s)	727, 997, 1086, 1316, 1349, 1645
SfcI	CTRYAG	1 cut(s)	1241
SfoI	GGCGCC	1 cut(s)	654
SfuI	TTCGAA	1 cut(s)	1113
SinI	GGWCC	1 cut(s)	1957
SmiMI	CAYNNNNRTG	1 cut(s)	339
SmlI	CTYRAG	2 cut(s)	191, 1214
SmoI	CTYRAG	2 cut(s)	191, 1214
SsiI	CCGC	3 cut(s)	1036, 1523, 1746
SspDI	GGCGCC	1 cut(s)	652
SspI	AATATT	1 cut(s)	1168
SspMI	CTAG	2 cut(s)	540, 828
SstI	GAGCTC	2 cut(s)	23, 300
StyD4I	CCNGG	2 cut(s)	946, 2204
StyI	CCWWGG	2 cut(s)	441, 2195
TaaI	ACNGT	7 cut(s)	726, 905, 1245, 1330, 1618, 1663, 2071
TaiI	ACGT	1 cut(s)	1162
TaqI	TCGA	5 cut(s)	381, 418, 1113, 1204, 1357
TatI	WGTACW	3 cut(s)	1456, 1492, 2071
TscAI	CASTG	9 cut(s)	145, 729, 1304, 1477, 1632, 1997, 2074, 2136, 2221
TseFI	GTSAC	3 cut(s)	604, 1253, 1390
TseI	GCWGC	1 cut(s)	2200
Tsp45I	GTSAC	3 cut(s)	604, 1253, 1390
TspGWI	ACGGA	2 cut(s)	171, 1417
TspRI	CASTG	9 cut(s)	145, 729, 1304, 1477, 1632, 1997, 2074, 2136, 2221
Tth111I	GACNNNGTC	2 cut(s)	181, 1618
Van91I	CCANNNNNTGG	1 cut(s)	561
VpaK11BI	GGWCC	1 cut(s)	1957
XapI	RAATTY	4 cut(s)	569, 980, 1937, 2186
XceI	RCATGY	2 cut(s)	1400, 2055
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2202
XmiI	GTMKAC	1 cut(s)	1718
XspI	CTAG	2 cut(s)	540, 828
Zsp2I	ATGCAT	1 cut(s)	1701

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.