Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0002914

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG250600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

ATGAAGGTGAAGAAGAAGAGCTCTGTTGCGGCAGACTCGGTGAAAGAACAACAGAAGAAGCAAAAAGGGAAGGGGAAGATGAAGATGAAGATTCCTGAAGCGAAACAAGAAAAACAGCAACCGGAGGAAGTAGACTCTGATTTTGTTTACGATTCCGGAGCTGAAGATGAGAGGAGTCTGTCAAATCATGAGGATATGTCTGGTGGTGAAGGATCTGACTTAGAGGATTATCCATCAATCAGAGACACAGACTCGGAAGATGAAGAGAGTGGTTTTTCTGAAGATGAGGGTGTGCTCAACACCAGCAGAAATGATGGTTTGGCCATTGATCATGGTAATGAGGAGGAAAGTGATAGTTCTGGACTTCATGAAGTAGTCGAGGAAAGTGATTCATCAGAAGATGAGGTTGCTCCTCGAAATACAATTGGTGCTGTTCCCTTGGAGTGGTATCGGGATGAGAAACATATTGGTTATGATCTTACAGGGAAGAAGATTAAAAAGAAGGAAAGAGAAGATAAATTACAATCCTTTCTTGCTAGCGCTGATGATTCCAAAAATTGGCGCAAATTTTTGGATGAATACAATGACGAGGAAGTAGAAGTGACAAAAGAAGATATGAAAACTATAAATAGATTGCTTGAAGGAAAGGCGCCACACAGTGACTTTGATCCATATGCGCCTTATGTTGATTGGTTTAAATGGGATGACTCAAAGCATCCACTGTCAAATGCTCCTGAACCCAAGAGACGATTCATTCCTTCAAAATCTGAAAGTAAACTGGTGAAGAGGTTAGTATTAGCAATTCGGAAGGGTTTAATTAAGCCTAGAAAGGATGAAGAAGAAGAAGAAGAAGAAAGTGTTTATCCCTTGTGGGGAGACGACTCTAATTCAACGGAAAAGGATGGTAGCCATTTATCTTACATTCCAGCACCAAAGCCAAAATTGCCAGGGTATGAGGAGTCCTTCAATCCTCCTCCAGAATTCATCCCATCACAAGAAGAGATTGATGCTTATCAGTTAATGTATGAGGAAGACCGCCCTAAGTTTATACCAAAAAGGTTTACATCTATGAGAAGCATCCCTGCATATGAGAATGCTATTAAGGAGTGCTTCGAAAGATGTTTGGATCTATACTTGTGCCCCAGAGTTCGGAAGAAACGTATCAATATTGATCCTGAATCTCTGAAGCCCAAGCTACCAAGCCGAAAGGATCTCAAGCCTTATCCTGTGAAATGTTATCTAGAGTATAGAGGTCACAAAGACACAGTTACATCAGTTTCCACAGAAGTTTCAGGGCAGTGGATTGCATCAGGTTCATTGGATGGAACTGTGCGTATTTGGGAGGTTGAAACTGGTAGATGTCTCAAACTCTGGGAGATTGGAGAAGCTGTCACATATGTAGCTTGGAATCCCAATCCTGAGTATTCTGTATTGGCTGTCTCTGTGGGACAAGATGTACTTATTCTCAACACTGGTTTTGGGAATGAAGAAGTACAGAAAAAAACTAAAGAACTTCTTTCGGCTGAAACCCCTACCACAACAGATGACACGGCTACCTTCGTGAGCTGGATTCAAGATGAAACACATGAGGGCACCAGGTTAAGACATTTTAAGACTGTGTCTTCAGTGGAATGGCATCGTAGAGGAGACTACTTTTCAACGGTGGTGCCAGCAGGCCAATCAAAATCAATTTTTATGCATAGGCTCTCTCAGAAGTCTACCCAGACATTTTCAATTAAGTTGGGTGGGCTTGCAGTTACTTCAGTTTTCCATCCTGTTCGCTCCCACATCTTCATTTCTACGAAGAAAACTATTCGCCAATATGATTTGGTGAAGGGAAAGCAAATCAGAAAGCTTGATACAGGACTAAAAGAAATCTCCTCCATTGCAGTTCATCCTTCTGGTGATCATGTAATTGTGGGGAGCAGAGAAGGAAAATTTTGTTGGTTTGATATGGACCTTTCAACCAAAAAACCTTACCTTATTCGCCAGTGGCATAAGAAGGACATCAACAATGTGTCTATCCATCGTTTATATCCGTTGTTTGCAACATGCTCTGATGATTGCACCGTACAAGTTTCTCATGGCATGGTTTATTCAGATCTTAACCAGAACCCTCTTATAGTTCCACTGGAAATACTCCGAGGTCATGCAAGCTCAGATGGGAGAGGTGTAATGGATTGCAAATTCCACCCAAGGCAGCCCTGGTTGTTCACGGCCGGTGCTGACTCGGTGATCAGACTTTACTGCGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030684 GO:0030686 GO:0030687 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043021 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044877 GO:0046483 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BOP1NT WD40

Protein Analysis

751

Amino Acids

85.67

Weight (kDa)

5.57

Isoelectric Point (pI)

47.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BOP1NT	PF08145	150 - 409	8.9e-100	BOP1NT (NUC169) domain
WD40	PF00400	411 - 447	2.2e-09	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	412 - 491	9.4e-13	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	413 - 487	2.5e-07	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	414 - 551	2.9e-11	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	414 - 497	3.1e-10	WDHD1 first WD40 domain
Beta-prop_WDR36-Utp21_2nd	PF25168	415 - 476	1.5e-06	WDR36/Utp21 second beta-propeller domain
EIF3I	PF24805	416 - 523	1.6e-08	EIF3I
Beta-prop_CAF1B_HIR1	PF24105	416 - 507	5.4e-06	CAF1B/HIR1 beta-propeller domain
WD40_Prp19	PF24814	514 - 653	6e-07	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	536 - 749	8e-13	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	559 - 698	7.7e-08	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	598 - 749	2.2e-08	WDR3 first beta-propeller domain
Beta-prop_EML_2	PF23414	599 - 693	3.3e-07	Echinoderm microtubule-associated protein second beta-propeller
WD40_Prp19	PF24814	603 - 749	1.1e-08	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002914)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40360 AT2G40360
fragaria_vesca	FvH4_5g21650 FvH4_5g21650 FvH4_5g21650
malus_domestica	MD05G1062400.v1.1 MD10G1070100.v1.1
prunus_persica	Prupe.6G114000_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1
pyrus_communis	pycom05g05370 pycom05g05390 pycom10g05570
rosa_chinensis	RchiOBHm_Chr7g0209131 RchiOBHm_Chr7g0241521 RchiOBHm_Chr7g0241531 RchiOBHm_Chr7g0241541
rosa_laevigata	RLG00000000568
rosa_multiflora	Rmu_sc0000821.1_g000025 Rmu_sc0002268.1_g000023
rosa_roxburghii	Rroxscaffold_3G00218950 Rroxscaffold_3G00249700
rosa_rugosa	Rorug07G0109700 Rorug07G0109800 Rorug07G0345000
rosa_samantha	Rh7AG243600 Rh7AG499500 Rh7AG499600 Rh7BG238700 Rh7BG470600 Rh7BG470700 Rh7CG259100 Rh7DG250600 Rh7DG484000 Rh7DG484200
rosa_wichuraiana	Rw7G020660 Rw7G042200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	649, 1592, 1666
AccB7I	CCANNNNNTGG	1 cut(s)	558
AccI	GTMKAC	2 cut(s)	132, 1718
AccIII	TCCGGA	1 cut(s)	155
AciI	CCGC	2 cut(s)	29, 1036
AclWI	GGATC	5 cut(s)	220, 662, 1134, 1166, 1218
AcoI	YGGCCR	2 cut(s)	321, 2217
AcsI	RAATTY	4 cut(s)	566, 980, 1937, 2186
AcuI	CTGAAG	6 cut(s)	117, 183, 300, 1205, 1608, 1746
AcyI	GRCGYC	1 cut(s)	650
AdeI	CACNNNGTG	1 cut(s)	659
AfaI	GTAC	3 cut(s)	1458, 1494, 2073
AfeI	AGCGCT	1 cut(s)	541
AfiI	CCNNNNNNNGG	4 cut(s)	444, 558, 872, 1149
AgsI	TTSAA	9 cut(s)	641, 762, 891, 967, 1349, 1574, 1659, 1734, 1965
AjnI	CCWGG	3 cut(s)	946, 1595, 2204
AjuI	GAANNNNNNNTTGG	4 cut(s)	734, 766, 1927, 1959
AluBI	AGCT	8 cut(s)	21, 161, 1195, 1388, 1403, 1566, 1855, 2157
AluI	AGCT	8 cut(s)	21, 161, 1195, 1388, 1403, 1566, 1855, 2157
Alw21I	GWGCWC	2 cut(s)	23, 297
Alw26I	GTCTC	6 cut(s)	237, 739, 870, 1367, 1444, 1641
AlwI	GGATC	5 cut(s)	220, 662, 1134, 1166, 1218
Aor13HI	TCCGGA	1 cut(s)	155
Aor51HI	AGCGCT	1 cut(s)	541
AoxI	GGCC	3 cut(s)	321, 1675, 2217
ApeKI	GCWGC	1 cut(s)	2200
ApoI	RAATTY	4 cut(s)	566, 980, 1937, 2186
ArsI	GACNNNNNNTTYG	2 cut(s)	125, 157
AspLEI	GCGC	4 cut(s)	542, 564, 652, 679
AspS9I	GGNCC	1 cut(s)	1957
AsuHPI	GGTGA	7 cut(s)	19, 52, 218, 793, 1843, 1916, 2245
AsuII	TTCGAA	1 cut(s)	1113
AsuNHI	GCTAGC	1 cut(s)	536
AvaII	GGWCC	1 cut(s)	1957
BaeGI	GKGCMC	2 cut(s)	1142, 1595
BalI	TGGCCA	1 cut(s)	323
BanI	GGYRCC	3 cut(s)	649, 1592, 1666
BanII	GRGCYC	1 cut(s)	23
BarI	GAAGNNNNNNTAC	2 cut(s)	504, 536
BbsI	GAAGAC	2 cut(s)	1038, 1614
Bbv12I	GWGCWC	2 cut(s)	23, 297
BbvI	GCAGC	1 cut(s)	2212
BccI	CCATC	8 cut(s)	241, 308, 896, 997, 1316, 1779, 2034, 2156
BceAI	ACGGC	2 cut(s)	1566, 2232
BciT130I	CCWGG	3 cut(s)	948, 1597, 2206
BclI	TGATCA	3 cut(s)	328, 1906, 2235
BcoDI	GTCTC	6 cut(s)	237, 739, 870, 1367, 1444, 1641
BfaI	CTAG	3 cut(s)	537, 825, 1241
BfoI	RGCGCY	2 cut(s)	543, 653
BglII	AGATCT	1 cut(s)	2101
BisI	GCNGC	2 cut(s)	30, 2201
BlsI	GCNGC	2 cut(s)	31, 2202
Bme1390I	CCNGG	3 cut(s)	948, 1597, 2206
Bme18I	GGWCC	1 cut(s)	1957
BmgT120I	GGNCC	1 cut(s)	1957
BmiI	GGNNCC	3 cut(s)	651, 1594, 1668
BmrFI	CCNGG	3 cut(s)	948, 1597, 2206
BmsI	GCATC	5 cut(s)	724, 997, 1086, 1316, 1645
BmtI	GCTAGC	1 cut(s)	540
BpiI	GAAGAC	2 cut(s)	1038, 1614
BpmI	CTGGAG	1 cut(s)	960
Bpu14I	TTCGAA	1 cut(s)	1113
BpuEI	CTTGAG	1 cut(s)	1199
BsaBI	GATNNNNATC	1 cut(s)	1011
BsaHI	GRCGYC	1 cut(s)	650
BsaJI	CCNNGG	5 cut(s)	438, 947, 2143, 2195, 2204
BsaWI	WCCGGW	2 cut(s)	121, 155
BsaXI	ACNNNNNCTCC	2 cut(s)	1374, 1404
Bsc4I	CCNNNNNNNGG	4 cut(s)	444, 558, 872, 1149
Bse118I	RCCGGY	1 cut(s)	2219
Bse1I	ACTGG	5 cut(s)	783, 1357, 1477, 1990, 2136
Bse3DI	GCAATG	1 cut(s)	1884
Bse8I	GATNNNNATC	1 cut(s)	1011
BseAI	TCCGGA	1 cut(s)	155
BseBI	CCWGG	3 cut(s)	948, 1597, 2206
BseDI	CCNNGG	5 cut(s)	438, 947, 2143, 2195, 2204
BseJI	GATNNNNATC	1 cut(s)	1011
BseLI	CCNNNNNNNGG	4 cut(s)	444, 558, 872, 1149
BseMI	GCAATG	1 cut(s)	1884
BseMII	CTCAG	3 cut(s)	1410, 1724, 2172
BseNI	ACTGG	5 cut(s)	783, 1357, 1477, 1990, 2136
BseRI	GAGGAG	7 cut(s)	187, 356, 402, 963, 971, 1659, 1870
BseSI	GKGCMC	2 cut(s)	1142, 1595
BseX3I	CGGCCG	1 cut(s)	2217
BseXI	GCAGC	1 cut(s)	2212
Bsh1285I	CGRYCG	1 cut(s)	2220
BshFI	GGCC	3 cut(s)	323, 1677, 2219
BshNI	GGYRCC	3 cut(s)	649, 1592, 1666
BsiEI	CGRYCG	1 cut(s)	2220
BsiHKAI	GWGCWC	2 cut(s)	23, 297
BsiSI	CCGG	3 cut(s)	122, 156, 2220
BslFI	GGGAC	1 cut(s)	1461
BslI	CCNNNNNNNGG	4 cut(s)	444, 558, 872, 1149
BsmAI	GTCTC	6 cut(s)	237, 739, 870, 1367, 1444, 1641
BsmBI	CGTCTC	2 cut(s)	739, 870
BsmFI	GGGAC	1 cut(s)	1461
BsmI	GAATGC	1 cut(s)	1099
BsnI	GGCC	3 cut(s)	323, 1677, 2219
Bsp119I	TTCGAA	1 cut(s)	1113
Bsp1286I	GDGCHC	4 cut(s)	23, 297, 1142, 1595
Bsp13I	TCCGGA	1 cut(s)	155
BspACI	CCGC	2 cut(s)	29, 1036
BspANI	GGCC	3 cut(s)	323, 1677, 2219
BspCNI	CTCAG	3 cut(s)	1411, 1723, 2171
BspEI	TCCGGA	1 cut(s)	155
BspHI	TCATGA	2 cut(s)	187, 367
BspLI	GGNNCC	3 cut(s)	651, 1594, 1668
BspOI	GCTAGC	1 cut(s)	540
BspPI	GGATC	5 cut(s)	220, 662, 1134, 1166, 1218
BspQI	GCTCTTC	1 cut(s)	11
BspT104I	TTCGAA	1 cut(s)	1113
BspT107I	GGYRCC	3 cut(s)	649, 1592, 1666
BsrDI	GCAATG	1 cut(s)	1884
BsrFI	RCCGGY	1 cut(s)	2219
BsrI	ACTGG	5 cut(s)	783, 1357, 1477, 1990, 2136
BssAI	RCCGGY	1 cut(s)	2219
BssECI	CCNNGG	5 cut(s)	438, 947, 2143, 2195, 2204
BssNI	GRCGYC	1 cut(s)	650
BssT1I	CCWWGG	2 cut(s)	438, 2195
Bst2UI	CCWGG	3 cut(s)	948, 1597, 2206
Bst4CI	ACNGT	7 cut(s)	659, 723, 1267, 1330, 1618, 1663, 2071
Bst6I	CTCTTC	4 cut(s)	11, 258, 779, 993
BstACI	GRCGYC	1 cut(s)	650
BstBI	TTCGAA	1 cut(s)	1113
BstC8I	GCNNGC	5 cut(s)	538, 1671, 1675, 1752, 2155
BstDEI	CTNAG	5 cut(s)	220, 1041, 1419, 1710, 2158
BstH2I	RGCGCY	2 cut(s)	543, 653
BstHHI	GCGC	4 cut(s)	542, 564, 652, 679
BstMAI	GTCTC	6 cut(s)	237, 739, 870, 1367, 1444, 1641
BstMCI	CGRYCG	1 cut(s)	2220
BstMWI	GCNNNNNNNGC	1 cut(s)	943
BstNI	CCWGG	3 cut(s)	948, 1597, 2206
BstNSI	RCATGY	1 cut(s)	2055
BstSCI	CCNGG	3 cut(s)	946, 1595, 2204
BstSLI	GKGCMC	2 cut(s)	1142, 1595
BstV1I	GCAGC	1 cut(s)	2212
BstV2I	GAAGAC	2 cut(s)	1038, 1614
BstX2I	RGATCY	4 cut(s)	212, 1126, 1210, 2101
BstYI	RGATCY	4 cut(s)	212, 1126, 1210, 2101
BstZI	CGGCCG	1 cut(s)	2217
BsuRI	GGCC	3 cut(s)	323, 1677, 2219
BtsI	GCAGTG	1 cut(s)	1304
BtsIMutI	CAGTG	7 cut(s)	664, 719, 1304, 1470, 1632, 1997, 2129
Cac8I	GCNNGC	5 cut(s)	538, 1671, 1675, 1752, 2155
CciI	TCATGA	2 cut(s)	187, 367
CfoI	GCGC	4 cut(s)	542, 564, 652, 679
Cfr10I	RCCGGY	1 cut(s)	2219
Cfr13I	GGNCC	1 cut(s)	1957
CsiI	ACCWGGT	1 cut(s)	1595
Csp6I	GTAC	3 cut(s)	1457, 1493, 2072
CviAII	CATG	9 cut(s)	188, 332, 368, 1586, 1910, 2052, 2084, 2089, 2150
CviQI	GTAC	3 cut(s)	1457, 1493, 2072
DdeI	CTNAG	5 cut(s)	220, 1041, 1419, 1710, 2158
DinI	GGCGCC	1 cut(s)	651
DraI	TTTAAA	1 cut(s)	697
DraIII	CACNNNGTG	1 cut(s)	659
EaeI	YGGCCR	2 cut(s)	321, 2217
EagI	CGGCCG	1 cut(s)	2217
Eam1104I	CTCTTC	4 cut(s)	11, 258, 779, 993
EarI	CTCTTC	4 cut(s)	11, 258, 779, 993
Ecl136II	GAGCTC	1 cut(s)	21
EclXI	CGGCCG	1 cut(s)	2217
Eco130I	CCWWGG	2 cut(s)	438, 2195
Eco24I	GRGCYC	1 cut(s)	23
Eco47I	GGWCC	1 cut(s)	1957
Eco47III	AGCGCT	1 cut(s)	541
Eco52I	CGGCCG	1 cut(s)	2217
Eco53kI	GAGCTC	1 cut(s)	21
Eco57I	CTGAAG	6 cut(s)	117, 183, 300, 1205, 1608, 1746
EcoICRI	GAGCTC	1 cut(s)	21
EcoRI	GAATTC	1 cut(s)	980
EcoRII	CCWGG	3 cut(s)	946, 1595, 2204
EcoT14I	CCWWGG	2 cut(s)	438, 2195
EcoT22I	ATGCAT	1 cut(s)	1701
EcoT38I	GRGCYC	1 cut(s)	23
EgeI	GGCGCC	1 cut(s)	651
EheI	GGCGCC	1 cut(s)	651
ErhI	CCWWGG	2 cut(s)	438, 2195
Esp3I	CGTCTC	2 cut(s)	739, 870
FaeI	CATG	9 cut(s)	191, 335, 371, 1589, 1913, 2055, 2087, 2092, 2153
FalI	AAGNNNNNCTT	6 cut(s)	1094, 1126, 1443, 1475, 1500, 1532
FaqI	GGGAC	1 cut(s)	1461
FatI	CATG	9 cut(s)	187, 331, 367, 1585, 1909, 2051, 2083, 2088, 2149
FauNDI	CATATG	3 cut(s)	673, 1087, 1396
FbaI	TGATCA	3 cut(s)	328, 1906, 2235
FblI	GTMKAC	2 cut(s)	132, 1718
Fnu4HI	GCNGC	2 cut(s)	30, 2201
FriOI	GRGCYC	1 cut(s)	23
Fsp4HI	GCNGC	2 cut(s)	30, 2201
FspBI	CTAG	3 cut(s)	537, 825, 1241
GlaI	GCGC	4 cut(s)	541, 563, 651, 678
GluI	GCNGC	2 cut(s)	30, 2201
GsuI	CTGGAG	1 cut(s)	960
HaeII	RGCGCY	2 cut(s)	543, 653
HaeIII	GGCC	3 cut(s)	323, 1677, 2219
HapII	CCGG	3 cut(s)	122, 156, 2220
HhaI	GCGC	4 cut(s)	542, 564, 652, 679
Hin1I	GRCGYC	1 cut(s)	650
Hin1II	CATG	9 cut(s)	191, 335, 371, 1589, 1913, 2055, 2087, 2092, 2153
Hin6I	GCGC	4 cut(s)	540, 562, 650, 677
HinP1I	GCGC	4 cut(s)	540, 562, 650, 677
HindIII	AAGCTT	1 cut(s)	1853
HpaII	CCGG	3 cut(s)	122, 156, 2220
HphI	GGTGA	7 cut(s)	19, 52, 218, 793, 1843, 1916, 2245
Hpy166II	GTNNAC	6 cut(s)	133, 148, 776, 1062, 1719, 2214
Hpy8I	GTNNAC	6 cut(s)	133, 148, 776, 1062, 1719, 2214
HpyCH4III	ACNGT	7 cut(s)	659, 723, 1267, 1330, 1618, 1663, 2071
HpyCH4IV	ACGT	1 cut(s)	1159
HpyCH4V	TGCA	9 cut(s)	1085, 1307, 1699, 1754, 1889, 2048, 2067, 2153, 2184
HpyF10VI	GCNNNNNNNGC	1 cut(s)	943
HpyF3I	CTNAG	5 cut(s)	220, 1041, 1419, 1710, 2158
HpySE526I	ACGT	1 cut(s)	1159
Hsp92I	GRCGYC	1 cut(s)	650
Hsp92II	CATG	9 cut(s)	191, 335, 371, 1589, 1913, 2055, 2087, 2092, 2153
HspAI	GCGC	4 cut(s)	540, 562, 650, 677
KasI	GGCGCC	1 cut(s)	649
Kpn2I	TCCGGA	1 cut(s)	155
Ksp22I	TGATCA	3 cut(s)	328, 1906, 2235
LguI	GCTCTTC	1 cut(s)	11
LmnI	GCTCC	5 cut(s)	158, 415, 736, 1787, 1923
Lsp1109I	GCAGC	1 cut(s)	2212
LweI	GCATC	5 cut(s)	724, 997, 1086, 1316, 1645
MabI	ACCWGGT	1 cut(s)	1595
MaeI	CTAG	3 cut(s)	537, 825, 1241
MaeII	ACGT	1 cut(s)	1159
MaeIII	GTNAC	6 cut(s)	601, 659, 1253, 1267, 1390, 1756
MfeI	CAATTG	1 cut(s)	423
MflI	RGATCY	4 cut(s)	212, 1126, 1210, 2101
MhlI	GDGCHC	4 cut(s)	23, 297, 1142, 1595
MlsI	TGGCCA	1 cut(s)	323
MluNI	TGGCCA	1 cut(s)	323
Mly113I	GGCGCC	1 cut(s)	650
MlyI	GAGTC	8 cut(s)	29, 128, 184, 245, 701, 875, 968, 2222
Mox20I	TGGCCA	1 cut(s)	323
Mph1103I	ATGCAT	1 cut(s)	1701
MroI	TCCGGA	1 cut(s)	155
MscI	TGGCCA	1 cut(s)	323
MslI	CAYNNNNRTG	1 cut(s)	336
Msp20I	TGGCCA	1 cut(s)	323
MspI	CCGG	3 cut(s)	122, 156, 2220
MspR9I	CCNGG	3 cut(s)	948, 1597, 2206
MunI	CAATTG	1 cut(s)	423
Mva1269I	GAATGC	1 cut(s)	1099
MvaI	CCWGG	3 cut(s)	948, 1597, 2206
MwoI	GCNNNNNNNGC	1 cut(s)	943
NarI	GGCGCC	1 cut(s)	650
NdeI	CATATG	3 cut(s)	673, 1087, 1396
NheI	GCTAGC	1 cut(s)	536
NlaIII	CATG	9 cut(s)	191, 335, 371, 1589, 1913, 2055, 2087, 2092, 2153
NlaIV	GGNNCC	3 cut(s)	651, 1594, 1668
NmuCI	GTSAC	4 cut(s)	601, 659, 1253, 1390
NsiI	ATGCAT	1 cut(s)	1701
NspI	RCATGY	1 cut(s)	2055
NspV	TTCGAA	1 cut(s)	1113
PacI	TTAATTAA	1 cut(s)	819
PagI	TCATGA	2 cut(s)	187, 367
PciSI	GCTCTTC	1 cut(s)	11
PcsI	WCGNNNNNNNCGW	1 cut(s)	1156
PctI	GAATGC	1 cut(s)	1099
PfeI	GAWTC	8 cut(s)	91, 152, 389, 548, 750, 1178, 1408, 1570
PflFI	GACNNNGTC	1 cut(s)	1618
PflMI	CCANNNNNTGG	1 cut(s)	558
PkrI	GCNGC	2 cut(s)	31, 2202
PleI	GAGTC	8 cut(s)	29, 128, 183, 245, 701, 875, 967, 2222
PluTI	GGCGCC	1 cut(s)	653
PpsI	GAGTC	8 cut(s)	29, 128, 183, 245, 701, 875, 967, 2222
Psp124BI	GAGCTC	1 cut(s)	23
Psp6I	CCWGG	3 cut(s)	946, 1595, 2204
PspGI	CCWGG	3 cut(s)	946, 1595, 2204
PspN4I	GGNNCC	3 cut(s)	651, 1594, 1668
PspPI	GGNCC	1 cut(s)	1957
PsuI	RGATCY	4 cut(s)	212, 1126, 1210, 2101
PsyI	GACNNNGTC	1 cut(s)	1618
RsaI	GTAC	3 cut(s)	1458, 1494, 2073
RsaNI	GTAC	3 cut(s)	1457, 1493, 2072
RseI	CAYNNNNRTG	1 cut(s)	336
SacI	GAGCTC	1 cut(s)	23
SapI	GCTCTTC	1 cut(s)	11
SatI	GCNGC	2 cut(s)	30, 2201
Sau96I	GGNCC	1 cut(s)	1957
SchI	GAGTC	8 cut(s)	29, 128, 184, 245, 701, 875, 968, 2222
ScrFI	CCNGG	3 cut(s)	948, 1597, 2206
SduI	GDGCHC	4 cut(s)	23, 297, 1142, 1595
SexAI	ACCWGGT	1 cut(s)	1595
SfaNI	GCATC	5 cut(s)	724, 997, 1086, 1316, 1645
SfoI	GGCGCC	1 cut(s)	651
SfuI	TTCGAA	1 cut(s)	1113
SinI	GGWCC	1 cut(s)	1957
SmiMI	CAYNNNNRTG	1 cut(s)	336
SmlI	CTYRAG	1 cut(s)	1214
SmoI	CTYRAG	1 cut(s)	1214
SsiI	CCGC	2 cut(s)	29, 1036
SspDI	GGCGCC	1 cut(s)	649
SspI	AATATT	1 cut(s)	1168
SspMI	CTAG	3 cut(s)	537, 825, 1241
SstI	GAGCTC	1 cut(s)	23
StyD4I	CCNGG	3 cut(s)	946, 1595, 2204
StyI	CCWWGG	2 cut(s)	438, 2195
TaaI	ACNGT	7 cut(s)	659, 723, 1267, 1330, 1618, 1663, 2071
TaiI	ACGT	1 cut(s)	1162
TaqI	TCGA	3 cut(s)	378, 415, 1113
TatI	WGTACW	2 cut(s)	1456, 1492
TauI	GCSGC	1 cut(s)	32
TfiI	GAWTC	8 cut(s)	91, 152, 389, 548, 750, 1178, 1408, 1570
TscAI	CASTG	7 cut(s)	664, 726, 1304, 1477, 1632, 1997, 2136
TseFI	GTSAC	4 cut(s)	601, 659, 1253, 1390
TseI	GCWGC	1 cut(s)	2200
Tsp45I	GTSAC	4 cut(s)	601, 659, 1253, 1390
TspGWI	ACGGA	2 cut(s)	908, 2028
TspRI	CASTG	7 cut(s)	664, 726, 1304, 1477, 1632, 1997, 2136
Tth111I	GACNNNGTC	1 cut(s)	1618
Van91I	CCANNNNNTGG	1 cut(s)	558
VpaK11BI	GGWCC	1 cut(s)	1957
XapI	RAATTY	4 cut(s)	566, 980, 1937, 2186
XbaI	TCTAGA	1 cut(s)	1240
XceI	RCATGY	1 cut(s)	2055
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2202
XmiI	GTMKAC	2 cut(s)	132, 1718
XspI	CTAG	3 cut(s)	537, 825, 1241
Zsp2I	ATGCAT	1 cut(s)	1701

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.