Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0002914

Physical Location & Seq

Genomic Coordinates Reverse (-)

10964184 .. 10969880

Gene Structure 5697 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1062400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGTCAGATGGGGAAGGATCGGATTCGGAGGATTATCCGTCAATCAGAGACTCGGACTCAGAAGGCGAAGAGAGTGATTCCTCTGGAGATGAGGGTGTTATCAACACAAGCGACAATGATGGCGCGGCCAGTGATTCTGGTGATGATGATGATGAAAGTGATAGCTCTGAACTTGGTGAGGGAGTTGAGGAGAGTGATTCATCTGAGGATGAGGTGGTTCCTCGAAATACTGTTGGTGATGTTCCCTTGGAGTGGTATCGGGATGAGAAACATATTGGTTATGACATTAAAGGGAAGAAGATAAAGAAGAAGGAAAAAGAAGATAAGTTGCAATCCTTTCTTGCTAGTGCTGACGATTCAAAGAACTGGCGCAAAATTTATGATGAATATAACGATGAGGAAGTAGAACTGACAAAAGAAGATATCAAATCGATTAGTAGACTACTTGAAGGAAAGGCTCCACATGGTGACTTTGATCCATATGCGCCGTATGTTGATTGGTTTAAATGGGATGACTCCAAGCATCCACTGTCAAATGCACCTGAACCCAAGAGACGATTCATTCCTTCAAAATCAGAAAGTAAACTGGTTAATAAGATTAAGTTGGCCATTCGCAAGGGTTTAATTAAGCCTAAAAAGTCTAAAGAGGAAGAAGAAGATGAAGAAAGTGTTTATCCATTGTGGGAAGATGACTCTAATTCAACGGAAAAGAATAACCATCTAACTTACATTCCTGCACCAAAGCCAAAGTTGCCTGGCCATGAGGAGTCCTTCAATCCATCTTTAGAATACATCCCAACACAAGAAGAGGTCAACTCTTACCAGTTAATGTATGAAGAAGACCGTCCTAAATTTATACCTAAAAGGTTTGCAAATATGAGAAGCATCCCTGCATATGAGAATGCTGTGAAGGAATGCTTTGAGAGATGTTTGGATCTATATTTGTGCCCTAGAGTCCGAAAGAAACGTCTTAATATAGACCCTGAATCTCTCAAGCCCAAGCTACCAAGCCGAACTGAACTTAAGCCTTACCCTGTAGCATGTTATCTTGAGTATAGAGGCCACGAGGATGCAGTTACATCAGTCTCTGTAGAAGCTTCAGGGCAGTGGATTGCATCAGGTTCATTGGATGGAACTTTGCGTATTTGGGAGGTTGAAACTGGTAGATGTGTCAAAATCTGCGATATTGGTGAAGCCGTCAAATATGTGGCTTGGAATCCTAACCCTGAGCATTCTATAGTGGCTGTCTCGGCGGGACAAGACATACTTCTTTTGAACCCTGGTTGTGGGACGGAAGAAGTACAGAAAAGAACTAAAGAACTTCTCTCTGTTGAGATGCCCATGCCTGACGACTCTGCATCCAGTGTAAGCTGGCTTCATGATGATAAACTTGAGGGAATCAGATTAAGGCATTCCAAGACCGTGGCTTCAGTAGAGTGGCATCGTAAAGGAGACTACCTTTCAACACTCTCTAAGAAGTTTACCCAGACACTTTCATTCAAGTTGCATGGGGTTGCAGTTACTTCAGTTTTCCATCCTACAAGGTCTTTCTTCTTCATTTCAACAAAAAAGATTATTCGTGTTTATGATCTGGTGAAGGATGGAAAACTTGTCAAAAAGCTTGAGACTGGACTTCGTGAAGTCTCCTCTATTGCAGTTCATCCTTCTGGTGATCATATAATTGTGGGAAGCAGAGAAGGAAAATTATGTTGGTTCGACATGGACCTTTCATCTAAACCTTACAAAACTCTCAAGTTGCATCAGAAGGACATCAACAATGTATCTTTCCATCGTTTGTACCCGCTGTTTGCTACATGCTCTGATGACTGCACTGCTTATGTTTTTCATGGAATGGTTTATTCAGATCTTAACCAGAACCCTCTTATTGTTCCATTGGAAATACTCCGAGGTCATACAAGCTCAAATGGGAGAGGTGTATTGGACTGTAAGTTCCATCCAAGGCAGCCATGGTTATTCACTAGCGGCGCAGACTCGGTGATTAGACTTTATTGCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030684 GO:0030686 GO:0030687 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043021 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044877 GO:0046483 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BOP1NT WD40

Protein Analysis

673

Amino Acids

76.2

Weight (kDa)

5.25

Isoelectric Point (pI)

41.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BOP1NT	PF08145	86 - 345	8.9e-100	BOP1NT (NUC169) domain
WD40	PF00400	348 - 383	1.9e-09	WD domain, G-beta repeat
WD40_CDC20-Fz	PF24807	348 - 419	8.1e-06	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	348 - 408	3.6e-10	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	350 - 426	1.6e-09	WDHD1 first WD40 domain
Beta-prop_WDR3_1st	PF25173	351 - 407	2e-07	WDR3 first beta-propeller domain
WD40_Prp19	PF24814	351 - 409	7.3e-06	Prp19 WD40 domain
EIF3I	PF24805	352 - 462	3.2e-09	EIF3I
Beta-prop_WDR5	PF25175	352 - 424	1.7e-11	WDR5 beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	352 - 466	4.7e-07	CAF1B/HIR1 beta-propeller domain
Beta-prop_THOC3	PF25174	471 - 670	1.3e-12	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	472 - 615	3.1e-08	WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_1st	PF25171	487 - 670	6.7e-06	WDR36/Utp21 first beta-propeller
WD40_CDC20-Fz	PF24807	492 - 641	2.5e-07	CDC20/Fizzy WD40 domain
Beta-prop_EML_2	PF23414	512 - 616	1.9e-09	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_1st	PF25173	523 - 670	4e-10	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	545 - 670	8.2e-10	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002914)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40360 AT2G40360
fragaria_vesca	FvH4_5g21650 FvH4_5g21650 FvH4_5g21650
malus_domestica	MD05G1062400.v1.1 MD10G1070100.v1.1
prunus_persica	Prupe.6G114000_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1
pyrus_communis	pycom05g05370 pycom05g05390 pycom10g05570
rosa_chinensis	RchiOBHm_Chr7g0209131 RchiOBHm_Chr7g0241521 RchiOBHm_Chr7g0241531 RchiOBHm_Chr7g0241541
rosa_laevigata	RLG00000000568
rosa_multiflora	Rmu_sc0000821.1_g000025 Rmu_sc0002268.1_g000023
rosa_roxburghii	Rroxscaffold_3G00218950 Rroxscaffold_3G00249700
rosa_rugosa	Rorug07G0109700 Rorug07G0109800 Rorug07G0345000
rosa_samantha	Rh7AG243600 Rh7AG499500 Rh7AG499600 Rh7BG238700 Rh7BG470600 Rh7BG470700 Rh7CG259100 Rh7DG250600 Rh7DG484000 Rh7DG484200
rosa_wichuraiana	Rw7G020660 Rw7G042200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	439
AccII	CGCG	1 cut(s)	125
AciI	CCGC	4 cut(s)	125, 1253, 1802, 1983
AclWI	GGATC	3 cut(s)	25, 470, 942
AcoI	YGGCCR	3 cut(s)	126, 606, 757
AcsI	RAATTY	2 cut(s)	375, 851
AcuI	CTGAAG	3 cut(s)	1083, 1413, 1509
AdeI	CACNNNGTG	1 cut(s)	467
AfaI	GTAC	2 cut(s)	1302, 1799
AfiI	CCNNNNNNNGG	2 cut(s)	252, 1286
AflII	CTTAAG	1 cut(s)	1022
AjnI	CCWGG	2 cut(s)	754, 1279
AjuI	GAANNNNNNNTTGG	4 cut(s)	542, 574, 1693, 1725
AloI	GAACNNNNNNTCC	2 cut(s)	1934, 1966
AluBI	AGCT	6 cut(s)	165, 1003, 1097, 1371, 1621, 1920
AluI	AGCT	6 cut(s)	165, 1003, 1097, 1371, 1621, 1920
Alw26I	GTCTC	7 cut(s)	42, 547, 1090, 1252, 1446, 1619, 1648
AlwI	GGATC	3 cut(s)	25, 470, 942
AlwNI	CAGNNNCTG	1 cut(s)	1088
AoxI	GGCC	4 cut(s)	126, 606, 757, 1060
ApeKI	GCWGC	1 cut(s)	1963
ApoI	RAATTY	2 cut(s)	375, 851
ArsI	GACNNNNNNTTYG	2 cut(s)	952, 984
AspLEI	GCGC	4 cut(s)	125, 372, 487, 1988
AspS9I	GGNCC	1 cut(s)	1723
AsuHPI	GGTGA	8 cut(s)	152, 188, 248, 479, 1202, 1606, 1682, 2008
AvaII	GGWCC	1 cut(s)	1723
BaeGI	GKGCMC	1 cut(s)	950
BalI	TGGCCA	2 cut(s)	608, 759
BarI	GAAGNNNNNNTAC	2 cut(s)	1359, 1391
BauI	CACGAG	1 cut(s)	1064
BbsI	GAAGAC	1 cut(s)	846
BbvI	GCAGC	1 cut(s)	1975
BccI	CCATC	9 cut(s)	2, 113, 726, 787, 1124, 1542, 1595, 1797, 1962
BceAI	ACGGC	2 cut(s)	472, 1181
BciT130I	CCWGG	2 cut(s)	756, 1281
BclI	TGATCA	1 cut(s)	1672
BcoDI	GTCTC	7 cut(s)	42, 547, 1090, 1252, 1446, 1619, 1648
BfaI	CTAG	3 cut(s)	345, 951, 1980
BfmI	CTRYAG	3 cut(s)	1035, 1089, 1236
BfrI	CTTAAG	1 cut(s)	1022
BglII	AGATCT	1 cut(s)	1864
BisI	GCNGC	3 cut(s)	126, 1964, 1984
BlsI	GCNGC	3 cut(s)	127, 1965, 1985
Bme1390I	CCNGG	2 cut(s)	756, 1281
Bme18I	GGWCC	1 cut(s)	1723
BmgT120I	GGNCC	1 cut(s)	1723
BmiI	GGNNCC	2 cut(s)	219, 459
BmrFI	CCNGG	2 cut(s)	756, 1281
BmsI	GCATC	8 cut(s)	532, 894, 1060, 1124, 1326, 1367, 1450, 1768
BpiI	GAAGAC	1 cut(s)	846
BplI	GAGNNNNNCTC	2 cut(s)	800, 832
BpmI	CTGGAG	1 cut(s)	105
Bpu10I	CCTNAGC	1 cut(s)	1227
BpuEI	CTTGAG	5 cut(s)	977, 1070, 1412, 1643, 1736
Bsa29I	ATCGAT	1 cut(s)	431
BsaJI	CCNNGG	6 cut(s)	246, 1279, 1422, 1906, 1958, 1967
Bsc4I	CCNNNNNNNGG	2 cut(s)	252, 1286
Bse1I	ACTGG	7 cut(s)	129, 371, 591, 823, 1165, 1362, 1633
BseBI	CCWGG	2 cut(s)	756, 1281
BseCI	ATCGAT	1 cut(s)	431
BseDI	CCNNGG	6 cut(s)	246, 1279, 1422, 1906, 1958, 1967
BseLI	CCNNNNNNNGG	2 cut(s)	252, 1286
BseMII	CTCAG	3 cut(s)	72, 195, 1218
BseNI	ACTGG	7 cut(s)	129, 371, 591, 823, 1165, 1362, 1633
BseRI	GAGGAG	3 cut(s)	203, 779, 1636
BseSI	GKGCMC	1 cut(s)	950
BseXI	GCAGC	1 cut(s)	1975
BsgI	GTGCAG	2 cut(s)	720, 1813
Bsh1236I	CGCG	1 cut(s)	125
BshFI	GGCC	4 cut(s)	128, 608, 759, 1062
BshVI	ATCGAT	1 cut(s)	431
BslFI	GGGAC	2 cut(s)	1269, 1303
BslI	CCNNNNNNNGG	2 cut(s)	252, 1286
BsmAI	GTCTC	7 cut(s)	42, 547, 1090, 1252, 1446, 1619, 1648
BsmBI	CGTCTC	1 cut(s)	547
BsmFI	GGGAC	2 cut(s)	1269, 1303
BsmI	GAATGC	4 cut(s)	907, 920, 1231, 1411
BsnI	GGCC	4 cut(s)	128, 608, 759, 1062
Bsp1286I	GDGCHC	1 cut(s)	950
Bsp143I	GATC	6 cut(s)	17, 475, 934, 1588, 1672, 1864
Bsp19I	CCATGG	1 cut(s)	1967
BspACI	CCGC	4 cut(s)	125, 1253, 1802, 1983
BspANI	GGCC	4 cut(s)	128, 608, 759, 1062
BspCNI	CTCAG	3 cut(s)	71, 196, 1219
BspDI	ATCGAT	1 cut(s)	431
BspFNI	CGCG	1 cut(s)	125
BspHI	TCATGA	1 cut(s)	1378
BspLI	GGNNCC	2 cut(s)	219, 459
BspPI	GGATC	3 cut(s)	25, 470, 942
BspTI	CTTAAG	1 cut(s)	1022
BsrI	ACTGG	7 cut(s)	129, 371, 591, 823, 1165, 1362, 1633
BssECI	CCNNGG	6 cut(s)	246, 1279, 1422, 1906, 1958, 1967
BssMI	GATC	6 cut(s)	17, 475, 934, 1588, 1672, 1864
BssSI	CACGAG	1 cut(s)	1064
BssT1I	CCWWGG	3 cut(s)	246, 1958, 1967
Bst2BI	CACGAG	1 cut(s)	1064
Bst2UI	CCWGG	2 cut(s)	756, 1281
Bst4CI	ACNGT	5 cut(s)	232, 531, 845, 1423, 1946
Bst6I	CTCTTC	2 cut(s)	63, 801
BstAFI	CTTAAG	1 cut(s)	1022
BstC8I	GCNNGC	1 cut(s)	1373
BstDEI	CTNAG	4 cut(s)	58, 204, 1227, 1473
BstDSI	CCRYGG	2 cut(s)	1422, 1967
BstFNI	CGCG	1 cut(s)	125
BstHHI	GCGC	4 cut(s)	125, 372, 487, 1988
BstKTI	GATC	6 cut(s)	20, 478, 937, 1591, 1675, 1867
BstMAI	GTCTC	7 cut(s)	42, 547, 1090, 1252, 1446, 1619, 1648
BstMBI	GATC	6 cut(s)	17, 475, 934, 1588, 1672, 1864
BstMWI	GCNNNNNNNGC	2 cut(s)	751, 1250
BstNI	CCWGG	2 cut(s)	756, 1281
BstNSI	RCATGY	2 cut(s)	1044, 1818
BstSCI	CCNGG	2 cut(s)	754, 1279
BstSFI	CTRYAG	3 cut(s)	1035, 1089, 1236
BstSLI	GKGCMC	1 cut(s)	950
BstUI	CGCG	1 cut(s)	125
BstV1I	GCAGC	1 cut(s)	1975
BstV2I	GAAGAC	1 cut(s)	846
BstX2I	RGATCY	2 cut(s)	934, 1864
BstXI	CCANNNNNNTGG	1 cut(s)	1423
BstYI	RGATCY	2 cut(s)	934, 1864
Bsu15I	ATCGAT	1 cut(s)	431
BsuRI	GGCC	4 cut(s)	128, 608, 759, 1062
BsuTUI	ATCGAT	1 cut(s)	431
BtgI	CCRYGG	2 cut(s)	1422, 1967
BtsI	GCAGTG	2 cut(s)	1112, 1830
BtsIMutI	CAGTG	5 cut(s)	136, 527, 1112, 1369, 1830
Cac8I	GCNNGC	1 cut(s)	1373
CaiI	CAGNNNCTG	1 cut(s)	1088
CciI	TCATGA	1 cut(s)	1378
CfoI	GCGC	4 cut(s)	125, 372, 487, 1988
Cfr13I	GGNCC	1 cut(s)	1723
ClaI	ATCGAT	1 cut(s)	431
Csp6I	GTAC	2 cut(s)	1301, 1798
CviQI	GTAC	2 cut(s)	1301, 1798
DdeI	CTNAG	4 cut(s)	58, 204, 1227, 1473
DpnI	GATC	6 cut(s)	19, 477, 936, 1590, 1674, 1866
DpnII	GATC	6 cut(s)	17, 475, 934, 1588, 1672, 1864
DraI	TTTAAA	1 cut(s)	505
DraIII	CACNNNGTG	1 cut(s)	467
EaeI	YGGCCR	3 cut(s)	126, 606, 757
Eam1104I	CTCTTC	2 cut(s)	63, 801
EarI	CTCTTC	2 cut(s)	63, 801
Eco130I	CCWWGG	3 cut(s)	246, 1958, 1967
Eco32I	GATATC	1 cut(s)	424
Eco47I	GGWCC	1 cut(s)	1723
Eco57I	CTGAAG	3 cut(s)	1083, 1413, 1509
EcoRII	CCWGG	2 cut(s)	754, 1279
EcoRV	GATATC	1 cut(s)	424
EcoT14I	CCWWGG	3 cut(s)	246, 1958, 1967
ErhI	CCWWGG	3 cut(s)	246, 1958, 1967
Esp3I	CGTCTC	1 cut(s)	547
FalI	AAGNNNNNCTT	4 cut(s)	902, 934, 1251, 1283
FaqI	GGGAC	2 cut(s)	1269, 1303
FauI	CCCGC	2 cut(s)	1246, 1809
FauNDI	CATATG	2 cut(s)	481, 895
FbaI	TGATCA	1 cut(s)	1672
FblI	GTMKAC	1 cut(s)	439
Fnu4HI	GCNGC	3 cut(s)	126, 1964, 1984
Fsp4HI	GCNGC	3 cut(s)	126, 1964, 1984
FspBI	CTAG	3 cut(s)	345, 951, 1980
GlaI	GCGC	4 cut(s)	124, 371, 486, 1987
GluI	GCNGC	3 cut(s)	126, 1964, 1984
GsuI	CTGGAG	1 cut(s)	105
HaeIII	GGCC	4 cut(s)	128, 608, 759, 1062
HhaI	GCGC	4 cut(s)	125, 372, 487, 1988
Hin6I	GCGC	4 cut(s)	123, 370, 485, 1986
HinP1I	GCGC	4 cut(s)	123, 370, 485, 1986
HincII	GTYRAC	1 cut(s)	814
HindII	GTYRAC	1 cut(s)	814
HindIII	AAGCTT	2 cut(s)	1095, 1619
HphI	GGTGA	8 cut(s)	152, 188, 248, 479, 1202, 1606, 1682, 2008
Hpy166II	GTNNAC	4 cut(s)	440, 584, 814, 1482
Hpy188III	TCNNGA	5 cut(s)	84, 260, 1049, 1379, 1637
Hpy8I	GTNNAC	4 cut(s)	440, 584, 814, 1482
HpyCH4III	ACNGT	5 cut(s)	232, 531, 845, 1423, 1946
HpyCH4IV	ACGT	1 cut(s)	967
HpyF10VI	GCNNNNNNNGC	2 cut(s)	751, 1250
HpyF3I	CTNAG	4 cut(s)	58, 204, 1227, 1473
HpySE526I	ACGT	1 cut(s)	967
HspAI	GCGC	4 cut(s)	123, 370, 485, 1986
Ksp22I	TGATCA	1 cut(s)	1672
Kzo9I	GATC	6 cut(s)	17, 475, 934, 1588, 1672, 1864
LmnI	GCTCC	1 cut(s)	463
Lsp1109I	GCAGC	1 cut(s)	1975
LweI	GCATC	8 cut(s)	532, 894, 1060, 1124, 1326, 1367, 1450, 1768
MaeI	CTAG	3 cut(s)	345, 951, 1980
MaeII	ACGT	1 cut(s)	967
MaeIII	GTNAC	3 cut(s)	467, 1075, 1519
MalI	GATC	6 cut(s)	19, 477, 936, 1590, 1674, 1866
MboI	GATC	6 cut(s)	17, 475, 934, 1588, 1672, 1864
MfeI	CAATTG	1 cut(s)	2014
MflI	RGATCY	2 cut(s)	934, 1864
MhlI	GDGCHC	1 cut(s)	950
MlsI	TGGCCA	2 cut(s)	608, 759
MluCI	AATT	7 cut(s)	375, 624, 697, 851, 1680, 1703, 2014
MluNI	TGGCCA	2 cut(s)	608, 759
MlyI	GAGTC	8 cut(s)	44, 50, 509, 686, 776, 963, 1346, 1985
Mox20I	TGGCCA	2 cut(s)	608, 759
MscI	TGGCCA	2 cut(s)	608, 759
MslI	CAYNNNNRTG	1 cut(s)	1068
Msp20I	TGGCCA	2 cut(s)	608, 759
MspA1I	CMGCKG	1 cut(s)	1804
MspCI	CTTAAG	1 cut(s)	1022
MspR9I	CCNGG	2 cut(s)	756, 1281
MunI	CAATTG	1 cut(s)	2014
Mva1269I	GAATGC	4 cut(s)	907, 920, 1231, 1411
MvaI	CCWGG	2 cut(s)	756, 1281
MvnI	CGCG	1 cut(s)	125
MwoI	GCNNNNNNNGC	2 cut(s)	751, 1250
NcoI	CCATGG	1 cut(s)	1967
NdeI	CATATG	2 cut(s)	481, 895
NdeII	GATC	6 cut(s)	17, 475, 934, 1588, 1672, 1864
NlaIV	GGNNCC	2 cut(s)	219, 459
NmeAIII	GCCGAG	1 cut(s)	1229
NmuCI	GTSAC	1 cut(s)	467
NspI	RCATGY	2 cut(s)	1044, 1818
PacI	TTAATTAA	1 cut(s)	627
PagI	TCATGA	1 cut(s)	1378
PctI	GAATGC	4 cut(s)	907, 920, 1231, 1411
PfeI	GAWTC	9 cut(s)	23, 77, 134, 197, 356, 558, 986, 1216, 1398
PkrI	GCNGC	3 cut(s)	127, 1965, 1985
PleI	GAGTC	8 cut(s)	44, 50, 509, 686, 775, 962, 1346, 1985
PpsI	GAGTC	8 cut(s)	44, 50, 509, 686, 775, 962, 1346, 1985
Psp6I	CCWGG	2 cut(s)	754, 1279
PspGI	CCWGG	2 cut(s)	754, 1279
PspN4I	GGNNCC	2 cut(s)	219, 459
PspPI	GGNCC	1 cut(s)	1723
PstNI	CAGNNNCTG	1 cut(s)	1088
PsuI	RGATCY	2 cut(s)	934, 1864
RsaI	GTAC	2 cut(s)	1302, 1799
RsaNI	GTAC	2 cut(s)	1301, 1798
RseI	CAYNNNNRTG	1 cut(s)	1068
SatI	GCNGC	3 cut(s)	126, 1964, 1984
Sau3AI	GATC	6 cut(s)	17, 475, 934, 1588, 1672, 1864
Sau96I	GGNCC	1 cut(s)	1723
SchI	GAGTC	8 cut(s)	44, 50, 509, 686, 776, 963, 1346, 1985
ScrFI	CCNGG	2 cut(s)	756, 1281
SduI	GDGCHC	1 cut(s)	950
SfaNI	GCATC	8 cut(s)	532, 894, 1060, 1124, 1326, 1367, 1450, 1768
SfcI	CTRYAG	3 cut(s)	1035, 1089, 1236
SinI	GGWCC	1 cut(s)	1723
SmiMI	CAYNNNNRTG	1 cut(s)	1068
SmlI	CTYRAG	6 cut(s)	992, 1022, 1049, 1391, 1622, 1751
SmoI	CTYRAG	6 cut(s)	992, 1022, 1049, 1391, 1622, 1751
Sse9I	AATT	7 cut(s)	375, 624, 697, 851, 1680, 1703, 2014
SsiI	CCGC	4 cut(s)	125, 1253, 1802, 1983
SspMI	CTAG	3 cut(s)	345, 951, 1980
StyD4I	CCNGG	2 cut(s)	754, 1279
StyI	CCWWGG	3 cut(s)	246, 1958, 1967
TaaI	ACNGT	5 cut(s)	232, 531, 845, 1423, 1946
TaiI	ACGT	1 cut(s)	970
TaqI	TCGA	3 cut(s)	223, 431, 1716
TasI	AATT	7 cut(s)	375, 624, 697, 851, 1680, 1703, 2014
TatI	WGTACW	1 cut(s)	1300
TauI	GCSGC	2 cut(s)	128, 1986
TfiI	GAWTC	9 cut(s)	23, 77, 134, 197, 356, 558, 986, 1216, 1398
TscAI	CASTG	5 cut(s)	136, 534, 1112, 1369, 1837
TseFI	GTSAC	1 cut(s)	467
TseI	GCWGC	1 cut(s)	1963
Tsp45I	GTSAC	1 cut(s)	467
TspGWI	ACGGA	3 cut(s)	27, 719, 1307
TspRI	CASTG	5 cut(s)	136, 534, 1112, 1369, 1837
Vha464I	CTTAAG	1 cut(s)	1022
VpaK11BI	GGWCC	1 cut(s)	1723
XapI	RAATTY	2 cut(s)	375, 851
XceI	RCATGY	2 cut(s)	1044, 1818
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1965
XmiI	GTMKAC	1 cut(s)	439
XspI	CTAG	3 cut(s)	345, 951, 1980

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.