Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002914

Physical Location & Seq

Genomic Coordinates Forward (+)

26514194 .. 26518124

Gene Structure 3931 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ18717

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGCCAGGTGTGCTCAACACCAGCAGAAATGATGGTTTGGCCATTGATCATGGTAATGAGGAGGAAAGTGATAGTTCTGGACTTCATGAAGTAGTGGACGAAAGTGATTCATCTGAAGATGAGGTTGCTCCTCGAAATACAATTGGTGCTGTTCCCTTGGAGTGGTATCGGGATGAGAAACATATTGGTTATGACCTTACAGGGAAGAAGATTAAAAAGAAGGAAAGAGAAGATAAATTACAATCCTTTCTTGCTAGCGCTGATGATTCCAAAAATTGGCGCAAATTTTTGGATGAATACAATGACGAGGAAGTAGAAGTGACAAAAGAAGATATGAAAACTATAAATAGATTGCTTGAAGGAAAGGCGCCACACGGTGACTTTGATCCATATGCACCTTATGTTGATTGGTTTAAATGGGATGACTCAAAGCATCCACTGTCAAATGCCCCTGAACCCAAGAGACGATTCATTCCTTCAAAATCTGAAAGTAAACTGGTGAAGAGGTTAGTATTAGCAATTCGGAAGGGTTTAATTAAGCCTAGAAAGGATGAAGAAGAAGAAGAAGAAGAAAGTGTTTATCCCTTGTGGGGAGATGACTCTAATTCAACGGAAAAGGATGGTAGCCATTTATCTTACATTCCAGCGCCAAAGCCAAAATTGCCAGGGTATGAGGAGTCCTTCAATCCTCCTCCAGAATTCATCCCATCACAAGAAGAGATTGATGCTTATCAGTTAATGTATGAGGAAGACCGCCCTAAGTTTATACCGAAAAGGTTTACATCTATGAGAAGCATCCCTGCATATGAGAATGCTATTAAGGAGTGCTTCGAAAGATGTTTGGATCTATACTTGTGCCCCAGAGTTCGGAAGAAACGTATCAATATTGATCCTGAATCTCTGAAGCCCAAGCTACCAAGCCGAAAGGATCTCAAGCCTTATCCTGTGAAATGTTATCTAGAGTATAGAGGTCACAAAGACACAGTTACATCAGTTTCCACAGAAGTTTCAGGGCAGTGGATTGCATCAGGTTCATTGGATGGAACTGTGCGAATTTGGGAGGTTGAAACTGGTAGATGTCTCAAACTCTGGGAGATTGGAGAAGCTGTCACATATGTAGCTTGGAATCCCAATCCTGAGTATTCCACTGTGTCTTCAGTGGAATGGCATCGTAGAGGAGACTACTTTTCAACGGTGAAGTCTACCCAGACATTTTCAATCAAGTTGGGTGGGCTAGCAGTTACTTCAGTTTTCCATCCTGTTCGCTCCCACATCTTCATTTCTACGAAGAAAACTATTCGCCAATATGATTTGGTGAAGGGAAAGCAAATCAGAAAGCTTGATACAGGACTAAAAGAAATCTCCTCCATTGCAGTTCATCCTTCTGGTGATCATGTAATTGTGGGGAGCAGAGAAGGAAAATTTTGTTGGTTTGATATGGACCTTTCAACCAAAAAACCTTACCTTATTCGCCAGTGGCATAAGAAGGACATCAACAATGTGTCTATCCATCATTTATATCCGTTGTTTGCAACATGCTCTGATGATTGCACTGTACAAGTTTCTCATGGCATGGTTTATTCAGATCTTAACCAGAACCCTCTTATAGTTCCACTGGAAATACTCCGAGGTCATGCAAGCTCAGATGGGAGAGGTGTAATGGATTGCAAATTCCACCCAAGGCAGCCCTGGTTGTTCACGGCCGGTGCTGACTCGGTGATCAGACTTTACTGCGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030684 GO:0030686 GO:0030687 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043021 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044877 GO:0046483 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BOP1NT WD40

Protein Analysis

579

Amino Acids

66.44

Weight (kDa)

6.04

Isoelectric Point (pI)

44.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BOP1NT	PF08145	56 - 315	5.5e-100	BOP1NT (NUC169) domain
WD40	PF00400	317 - 353	1.6e-09	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	318 - 387	2.7e-12	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	320 - 384	5.2e-10	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	320 - 390	1.5e-09	WDHD1 first WD40 domain
Beta-prop_WDR3_1st	PF25173	321 - 363	5.9e-07	WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	321 - 384	1.1e-06	WDR36/Utp21 second beta-propeller domain
EIF3I	PF24805	322 - 456	1.4e-08	EIF3I
Beta-prop_CAF1B_HIR1	PF24105	322 - 390	5.9e-06	CAF1B/HIR1 beta-propeller domain
WD40_CDC20-Fz	PF24807	402 - 526	4.5e-07	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	418 - 577	1.5e-11	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	426 - 577	1.1e-08	WDR3 first beta-propeller domain
Beta-prop_EML_2	PF23414	427 - 521	1.8e-07	Echinoderm microtubule-associated protein second beta-propeller
WD40_Prp19	PF24814	431 - 577	4.7e-09	Prp19 WD40 domain
Beta-prop_WDR5	PF25175	452 - 577	5e-07	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0002914)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40360 AT2G40360
fragaria_vesca	FvH4_5g21650 FvH4_5g21650 FvH4_5g21650
malus_domestica	MD05G1062400.v1.1 MD10G1070100.v1.1
prunus_persica	Prupe.6G114000_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1
pyrus_communis	pycom05g05370 pycom05g05390 pycom10g05570
rosa_chinensis	RchiOBHm_Chr7g0209131 RchiOBHm_Chr7g0241521 RchiOBHm_Chr7g0241531 RchiOBHm_Chr7g0241541
rosa_laevigata	RLG00000000568
rosa_multiflora	Rmu_sc0000821.1_g000025 Rmu_sc0002268.1_g000023
rosa_roxburghii	Rroxscaffold_3G00218950 Rroxscaffold_3G00249700
rosa_rugosa	Rorug07G0109700 Rorug07G0109800 Rorug07G0345000
rosa_samantha	Rh7AG243600 Rh7AG499500 Rh7AG499600 Rh7BG238700 Rh7BG470600 Rh7BG470700 Rh7CG259100 Rh7DG250600 Rh7DG484000 Rh7DG484200
rosa_wichuraiana	Rw7G020660 Rw7G042200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	367
AccB7I	CCANNNNNTGG	1 cut(s)	276
AccI	GTMKAC	1 cut(s)	1202
AciI	CCGC	1 cut(s)	754
AclWI	GGATC	4 cut(s)	380, 852, 884, 936
AcoI	YGGCCR	2 cut(s)	39, 1701
AcsI	RAATTY	5 cut(s)	284, 698, 1053, 1421, 1670
AcuI	CTGAAG	4 cut(s)	135, 923, 1140, 1230
AcyI	GRCGYC	1 cut(s)	368
AdeI	CACNNNGTG	1 cut(s)	377
AfaI	GTAC	1 cut(s)	1557
AfeI	AGCGCT	1 cut(s)	259
AfiI	CCNNNNNNNGG	4 cut(s)	162, 276, 590, 867
AgsI	TTSAA	8 cut(s)	359, 480, 609, 685, 1067, 1191, 1218, 1449
AjnI	CCWGG	3 cut(s)	4, 664, 1688
AjuI	GAANNNNNNNTTGG	4 cut(s)	452, 484, 1411, 1443
AluBI	AGCT	5 cut(s)	913, 1106, 1121, 1339, 1641
AluI	AGCT	5 cut(s)	913, 1106, 1121, 1339, 1641
Alw21I	GWGCWC	1 cut(s)	15
Alw26I	GTCTC	3 cut(s)	457, 1085, 1173
AlwI	GGATC	4 cut(s)	380, 852, 884, 936
Aor51HI	AGCGCT	1 cut(s)	259
AoxI	GGCC	2 cut(s)	39, 1701
ApeKI	GCWGC	1 cut(s)	1684
ApoI	RAATTY	5 cut(s)	284, 698, 1053, 1421, 1670
AspLEI	GCGC	4 cut(s)	260, 282, 370, 649
AspS9I	GGNCC	1 cut(s)	1441
AsuHPI	GGTGA	6 cut(s)	389, 511, 1207, 1327, 1400, 1729
AsuII	TTCGAA	1 cut(s)	831
AsuNHI	GCTAGC	2 cut(s)	254, 1234
AvaII	GGWCC	1 cut(s)	1441
BaeGI	GKGCMC	1 cut(s)	860
BalI	TGGCCA	1 cut(s)	41
BanI	GGYRCC	1 cut(s)	367
BarI	GAAGNNNNNNTAC	2 cut(s)	222, 254
BbsI	GAAGAC	2 cut(s)	756, 1146
Bbv12I	GWGCWC	1 cut(s)	15
BbvI	GCAGC	1 cut(s)	1696
BccI	CCATC	7 cut(s)	26, 614, 715, 1034, 1263, 1518, 1640
BceAI	ACGGC	1 cut(s)	1716
BciT130I	CCWGG	3 cut(s)	6, 666, 1690
BclI	TGATCA	3 cut(s)	46, 1390, 1719
BcoDI	GTCTC	3 cut(s)	457, 1085, 1173
BfaI	CTAG	4 cut(s)	255, 543, 959, 1235
BfoI	RGCGCY	3 cut(s)	261, 371, 650
BglII	AGATCT	1 cut(s)	1585
BisI	GCNGC	1 cut(s)	1685
BlsI	GCNGC	1 cut(s)	1686
Bme1390I	CCNGG	3 cut(s)	6, 666, 1690
Bme18I	GGWCC	1 cut(s)	1441
BmgT120I	GGNCC	1 cut(s)	1441
BmiI	GGNNCC	1 cut(s)	369
BmrFI	CCNGG	3 cut(s)	6, 666, 1690
BmsI	GCATC	5 cut(s)	442, 715, 804, 1034, 1177
BmtI	GCTAGC	2 cut(s)	258, 1238
BpiI	GAAGAC	2 cut(s)	756, 1146
BpmI	CTGGAG	1 cut(s)	678
Bpu14I	TTCGAA	1 cut(s)	831
BpuEI	CTTGAG	1 cut(s)	917
BsaBI	GATNNNNATC	1 cut(s)	729
BsaHI	GRCGYC	1 cut(s)	368
BsaJI	CCNNGG	5 cut(s)	156, 665, 1627, 1679, 1688
BsaXI	ACNNNNNCTCC	2 cut(s)	1092, 1122
Bsc4I	CCNNNNNNNGG	4 cut(s)	162, 276, 590, 867
Bse118I	RCCGGY	1 cut(s)	1703
Bse1I	ACTGG	4 cut(s)	501, 1075, 1474, 1620
Bse3DI	GCAATG	1 cut(s)	1368
Bse8I	GATNNNNATC	1 cut(s)	729
BseBI	CCWGG	3 cut(s)	6, 666, 1690
BseDI	CCNNGG	5 cut(s)	156, 665, 1627, 1679, 1688
BseJI	GATNNNNATC	1 cut(s)	729
BseLI	CCNNNNNNNGG	4 cut(s)	162, 276, 590, 867
BseMI	GCAATG	1 cut(s)	1368
BseMII	CTCAG	2 cut(s)	1128, 1656
BseNI	ACTGG	4 cut(s)	501, 1075, 1474, 1620
BseRI	GAGGAG	6 cut(s)	74, 120, 681, 689, 1191, 1354
BseSI	GKGCMC	1 cut(s)	860
BseX3I	CGGCCG	1 cut(s)	1701
BseXI	GCAGC	1 cut(s)	1696
Bsh1285I	CGRYCG	1 cut(s)	1704
BshFI	GGCC	2 cut(s)	41, 1703
BshNI	GGYRCC	1 cut(s)	367
BsiEI	CGRYCG	1 cut(s)	1704
BsiHKAI	GWGCWC	1 cut(s)	15
BsiSI	CCGG	1 cut(s)	1704
BslI	CCNNNNNNNGG	4 cut(s)	162, 276, 590, 867
BsmAI	GTCTC	3 cut(s)	457, 1085, 1173
BsmBI	CGTCTC	1 cut(s)	457
BsmI	GAATGC	1 cut(s)	817
BsnI	GGCC	2 cut(s)	41, 1703
Bsp119I	TTCGAA	1 cut(s)	831
Bsp1286I	GDGCHC	2 cut(s)	15, 860
Bsp1407I	TGTACA	1 cut(s)	1555
Bsp143I	GATC	8 cut(s)	46, 385, 844, 889, 928, 1390, 1585, 1719
BspACI	CCGC	1 cut(s)	754
BspANI	GGCC	2 cut(s)	41, 1703
BspCNI	CTCAG	2 cut(s)	1129, 1655
BspHI	TCATGA	1 cut(s)	85
BspLI	GGNNCC	1 cut(s)	369
BspOI	GCTAGC	2 cut(s)	258, 1238
BspPI	GGATC	4 cut(s)	380, 852, 884, 936
BspT104I	TTCGAA	1 cut(s)	831
BspT107I	GGYRCC	1 cut(s)	367
BsrDI	GCAATG	1 cut(s)	1368
BsrFI	RCCGGY	1 cut(s)	1703
BsrGI	TGTACA	1 cut(s)	1555
BsrI	ACTGG	4 cut(s)	501, 1075, 1474, 1620
BssAI	RCCGGY	1 cut(s)	1703
BssECI	CCNNGG	5 cut(s)	156, 665, 1627, 1679, 1688
BssMI	GATC	8 cut(s)	46, 385, 844, 889, 928, 1390, 1585, 1719
BssNI	GRCGYC	1 cut(s)	368
BssT1I	CCWWGG	2 cut(s)	156, 1679
Bst2UI	CCWGG	3 cut(s)	6, 666, 1690
Bst4CI	ACNGT	7 cut(s)	377, 441, 985, 1048, 1150, 1195, 1555
Bst6I	CTCTTC	2 cut(s)	497, 711
BstACI	GRCGYC	1 cut(s)	368
BstAUI	TGTACA	1 cut(s)	1555
BstBI	TTCGAA	1 cut(s)	831
BstC8I	GCNNGC	3 cut(s)	256, 1236, 1639
BstDEI	CTNAG	3 cut(s)	759, 1137, 1642
BstH2I	RGCGCY	3 cut(s)	261, 371, 650
BstHHI	GCGC	4 cut(s)	260, 282, 370, 649
BstKTI	GATC	8 cut(s)	49, 388, 847, 892, 931, 1393, 1588, 1722
BstMAI	GTCTC	3 cut(s)	457, 1085, 1173
BstMBI	GATC	8 cut(s)	46, 385, 844, 889, 928, 1390, 1585, 1719
BstMCI	CGRYCG	1 cut(s)	1704
BstMWI	GCNNNNNNNGC	2 cut(s)	10, 661
BstNI	CCWGG	3 cut(s)	6, 666, 1690
BstNSI	RCATGY	1 cut(s)	1539
BstSCI	CCNGG	3 cut(s)	4, 664, 1688
BstSLI	GKGCMC	1 cut(s)	860
BstV1I	GCAGC	1 cut(s)	1696
BstV2I	GAAGAC	2 cut(s)	756, 1146
BstX2I	RGATCY	3 cut(s)	844, 928, 1585
BstYI	RGATCY	3 cut(s)	844, 928, 1585
BstZI	CGGCCG	1 cut(s)	1701
BsuRI	GGCC	2 cut(s)	41, 1703
BtsI	GCAGTG	1 cut(s)	1022
BtsIMutI	CAGTG	7 cut(s)	437, 1022, 1146, 1164, 1481, 1551, 1613
Cac8I	GCNNGC	3 cut(s)	256, 1236, 1639
CciI	TCATGA	1 cut(s)	85
CfoI	GCGC	4 cut(s)	260, 282, 370, 649
Cfr10I	RCCGGY	1 cut(s)	1703
Cfr13I	GGNCC	1 cut(s)	1441
Csp6I	GTAC	1 cut(s)	1556
CspCI	CAANNNNNGTGG	2 cut(s)	1210, 1245
CviAII	CATG	7 cut(s)	50, 86, 1394, 1536, 1568, 1573, 1634
CviQI	GTAC	1 cut(s)	1556
DdeI	CTNAG	3 cut(s)	759, 1137, 1642
DinI	GGCGCC	1 cut(s)	369
DpnI	GATC	8 cut(s)	48, 387, 846, 891, 930, 1392, 1587, 1721
DpnII	GATC	8 cut(s)	46, 385, 844, 889, 928, 1390, 1585, 1719
DraI	TTTAAA	1 cut(s)	415
DraIII	CACNNNGTG	1 cut(s)	377
EaeI	YGGCCR	2 cut(s)	39, 1701
EagI	CGGCCG	1 cut(s)	1701
Eam1104I	CTCTTC	2 cut(s)	497, 711
EarI	CTCTTC	2 cut(s)	497, 711
EclXI	CGGCCG	1 cut(s)	1701
Eco130I	CCWWGG	2 cut(s)	156, 1679
Eco47I	GGWCC	1 cut(s)	1441
Eco47III	AGCGCT	1 cut(s)	259
Eco52I	CGGCCG	1 cut(s)	1701
Eco57I	CTGAAG	4 cut(s)	135, 923, 1140, 1230
EcoRI	GAATTC	1 cut(s)	698
EcoRII	CCWGG	3 cut(s)	4, 664, 1688
EcoT14I	CCWWGG	2 cut(s)	156, 1679
EgeI	GGCGCC	1 cut(s)	369
EheI	GGCGCC	1 cut(s)	369
ErhI	CCWWGG	2 cut(s)	156, 1679
Esp3I	CGTCTC	1 cut(s)	457
FaeI	CATG	7 cut(s)	53, 89, 1397, 1539, 1571, 1576, 1637
FalI	AAGNNNNNCTT	2 cut(s)	812, 844
FatI	CATG	7 cut(s)	49, 85, 1393, 1535, 1567, 1572, 1633
FauNDI	CATATG	3 cut(s)	391, 805, 1114
FbaI	TGATCA	3 cut(s)	46, 1390, 1719
FblI	GTMKAC	1 cut(s)	1202
Fnu4HI	GCNGC	1 cut(s)	1685
Fsp4HI	GCNGC	1 cut(s)	1685
FspBI	CTAG	4 cut(s)	255, 543, 959, 1235
GlaI	GCGC	4 cut(s)	259, 281, 369, 648
GluI	GCNGC	1 cut(s)	1685
GsuI	CTGGAG	1 cut(s)	678
HaeII	RGCGCY	3 cut(s)	261, 371, 650
HaeIII	GGCC	2 cut(s)	41, 1703
HapII	CCGG	1 cut(s)	1704
HhaI	GCGC	4 cut(s)	260, 282, 370, 649
Hin1I	GRCGYC	1 cut(s)	368
Hin1II	CATG	7 cut(s)	53, 89, 1397, 1539, 1571, 1576, 1637
Hin6I	GCGC	4 cut(s)	258, 280, 368, 647
HinP1I	GCGC	4 cut(s)	258, 280, 368, 647
HindIII	AAGCTT	1 cut(s)	1337
HinfI	GANTC	9 cut(s)	107, 266, 425, 468, 599, 677, 896, 1126, 1712
HpaII	CCGG	1 cut(s)	1704
HphI	GGTGA	6 cut(s)	389, 511, 1207, 1327, 1400, 1729
Hpy166II	GTNNAC	5 cut(s)	97, 494, 780, 1203, 1698
Hpy188III	TCNNGA	7 cut(s)	78, 86, 170, 695, 893, 959, 1136
Hpy8I	GTNNAC	5 cut(s)	97, 494, 780, 1203, 1698
HpyAV	CCTTC	9 cut(s)	214, 353, 486, 520, 691, 1312, 1392, 1409, 1480
HpyCH4III	ACNGT	7 cut(s)	377, 441, 985, 1048, 1150, 1195, 1555
HpyCH4IV	ACGT	1 cut(s)	877
HpyCH4V	TGCA	8 cut(s)	395, 803, 1025, 1373, 1532, 1551, 1637, 1668
HpyF10VI	GCNNNNNNNGC	2 cut(s)	10, 661
HpyF3I	CTNAG	3 cut(s)	759, 1137, 1642
HpySE526I	ACGT	1 cut(s)	877
Hsp92I	GRCGYC	1 cut(s)	368
Hsp92II	CATG	7 cut(s)	53, 89, 1397, 1539, 1571, 1576, 1637
HspAI	GCGC	4 cut(s)	258, 280, 368, 647
KasI	GGCGCC	1 cut(s)	367
Ksp22I	TGATCA	3 cut(s)	46, 1390, 1719
Kzo9I	GATC	8 cut(s)	46, 385, 844, 889, 928, 1390, 1585, 1719
LmnI	GCTCC	3 cut(s)	133, 1271, 1407
Lsp1109I	GCAGC	1 cut(s)	1696
LweI	GCATC	5 cut(s)	442, 715, 804, 1034, 1177
MaeI	CTAG	4 cut(s)	255, 543, 959, 1235
MaeII	ACGT	1 cut(s)	877
MaeIII	GTNAC	6 cut(s)	319, 377, 971, 985, 1108, 1240
MalI	GATC	8 cut(s)	48, 387, 846, 891, 930, 1392, 1587, 1721
MboI	GATC	8 cut(s)	46, 385, 844, 889, 928, 1390, 1585, 1719
MfeI	CAATTG	1 cut(s)	141
MflI	RGATCY	3 cut(s)	844, 928, 1585
MhlI	GDGCHC	2 cut(s)	15, 860
MlsI	TGGCCA	1 cut(s)	41
MluNI	TGGCCA	1 cut(s)	41
Mly113I	GGCGCC	1 cut(s)	368
MlyI	GAGTC	4 cut(s)	419, 593, 686, 1706
Mox20I	TGGCCA	1 cut(s)	41
MscI	TGGCCA	1 cut(s)	41
MseI	TTAA	7 cut(s)	213, 414, 533, 537, 737, 819, 1590
MslI	CAYNNNNRTG	1 cut(s)	54
Msp20I	TGGCCA	1 cut(s)	41
MspI	CCGG	1 cut(s)	1704
MspR9I	CCNGG	3 cut(s)	6, 666, 1690
MunI	CAATTG	1 cut(s)	141
Mva1269I	GAATGC	1 cut(s)	817
MvaI	CCWGG	3 cut(s)	6, 666, 1690
MwoI	GCNNNNNNNGC	2 cut(s)	10, 661
NarI	GGCGCC	1 cut(s)	368
NdeI	CATATG	3 cut(s)	391, 805, 1114
NdeII	GATC	8 cut(s)	46, 385, 844, 889, 928, 1390, 1585, 1719
NheI	GCTAGC	2 cut(s)	254, 1234
NlaIII	CATG	7 cut(s)	53, 89, 1397, 1539, 1571, 1576, 1637
NlaIV	GGNNCC	1 cut(s)	369
NmuCI	GTSAC	4 cut(s)	319, 377, 971, 1108
NspI	RCATGY	1 cut(s)	1539
NspV	TTCGAA	1 cut(s)	831
PacI	TTAATTAA	1 cut(s)	537
PagI	TCATGA	1 cut(s)	85
PcsI	WCGNNNNNNNCGW	1 cut(s)	874
PctI	GAATGC	1 cut(s)	817
PfeI	GAWTC	5 cut(s)	107, 266, 468, 896, 1126
PflMI	CCANNNNNTGG	1 cut(s)	276
PkrI	GCNGC	1 cut(s)	1686
PleI	GAGTC	4 cut(s)	419, 593, 685, 1706
PluTI	GGCGCC	1 cut(s)	371
PpsI	GAGTC	4 cut(s)	419, 593, 685, 1706
Psp6I	CCWGG	3 cut(s)	4, 664, 1688
PspGI	CCWGG	3 cut(s)	4, 664, 1688
PspN4I	GGNNCC	1 cut(s)	369
PspPI	GGNCC	1 cut(s)	1441
PsuI	RGATCY	3 cut(s)	844, 928, 1585
RsaI	GTAC	1 cut(s)	1557
RsaNI	GTAC	1 cut(s)	1556
RseI	CAYNNNNRTG	1 cut(s)	54
SaqAI	TTAA	7 cut(s)	213, 414, 533, 537, 737, 819, 1590
SatI	GCNGC	1 cut(s)	1685
Sau3AI	GATC	8 cut(s)	46, 385, 844, 889, 928, 1390, 1585, 1719
Sau96I	GGNCC	1 cut(s)	1441
SchI	GAGTC	4 cut(s)	419, 593, 686, 1706
ScrFI	CCNGG	3 cut(s)	6, 666, 1690
SduI	GDGCHC	2 cut(s)	15, 860
SfaNI	GCATC	5 cut(s)	442, 715, 804, 1034, 1177
SfoI	GGCGCC	1 cut(s)	369
SfuI	TTCGAA	1 cut(s)	831
SinI	GGWCC	1 cut(s)	1441
SmiMI	CAYNNNNRTG	1 cut(s)	54
SmlI	CTYRAG	1 cut(s)	932
SmoI	CTYRAG	1 cut(s)	932
SsiI	CCGC	1 cut(s)	754
SspDI	GGCGCC	1 cut(s)	367
SspI	AATATT	1 cut(s)	886
SspMI	CTAG	4 cut(s)	255, 543, 959, 1235
StyD4I	CCNGG	3 cut(s)	4, 664, 1688
StyI	CCWWGG	2 cut(s)	156, 1679
TaaI	ACNGT	7 cut(s)	377, 441, 985, 1048, 1150, 1195, 1555
TaiI	ACGT	1 cut(s)	880
TaqI	TCGA	2 cut(s)	133, 831
TatI	WGTACW	1 cut(s)	1555
TfiI	GAWTC	5 cut(s)	107, 266, 468, 896, 1126
Tru1I	TTAA	7 cut(s)	213, 414, 533, 537, 737, 819, 1590
Tru9I	TTAA	7 cut(s)	213, 414, 533, 537, 737, 819, 1590
TscAI	CASTG	7 cut(s)	444, 1022, 1153, 1164, 1481, 1558, 1620
TseFI	GTSAC	4 cut(s)	319, 377, 971, 1108
TseI	GCWGC	1 cut(s)	1684
Tsp45I	GTSAC	4 cut(s)	319, 377, 971, 1108
TspGWI	ACGGA	2 cut(s)	626, 1512
TspRI	CASTG	7 cut(s)	444, 1022, 1153, 1164, 1481, 1558, 1620
Van91I	CCANNNNNTGG	1 cut(s)	276
VpaK11BI	GGWCC	1 cut(s)	1441
XapI	RAATTY	5 cut(s)	284, 698, 1053, 1421, 1670
XbaI	TCTAGA	1 cut(s)	958
XceI	RCATGY	1 cut(s)	1539
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1686
XmiI	GTMKAC	1 cut(s)	1202
XspI	CTAG	4 cut(s)	255, 543, 959, 1235

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.