Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0002914

Physical Location & Seq

Genomic Coordinates Forward (+)

8545247 .. 8547270

Gene Structure 2024 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0109800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGTCTAGCTATACGCTTATCAATCTCCTGCAAATAATGGCGGAGCAGATCAATAATGAAACCTTTTCAATAGTACTTCTTGCCATTTTCTTCGTTCTCCTATACAGGTGGTCTTCCACTTCCACTTATTCTACAAAAAACTCACCACCTTCTCCACCAAAACTCCCCATCATCGGAAACCTTCACCAACTAGTCTCACCACGGTGTCCGCCACATCGCTTACTTGGAGCCTTGTCTCAGGTCCATGGCCCTCTCATGCTCCTCCACTTCGGAAGCGTCCCCGTCCTCATCGTCTCATCGGCCGAGGGTGCTCAGGCGATCATGAAAACACATGACCTCAATTTCTGCAGCAGGCCCAAGTCCACCGTCTTCGCAAAGCTTCTCTACAACTCAAACGATGTGGCAACCACGCCTTGCGGCGAGTATTGGAGGCAGATTAAGAGCATATGCGTGTTGAATCTGTTGAGCACCAAAAGGGTTCGGTCTTACCGCGGCGTTAGGGAGGAGGAAACCAAAGCCATGATCAAGCAGATAAGGGACTCAAAAGGAGTTGTGAATTTAAGGGAGATGCTTATGACGCTTACAAACGATGTCGTCTCGAGAGTGGCTCTAGGGAAGAGTTACTATAGTGATGGGGGTTTTAAAGAGCTTTCGGTGGATCATACGGAGTTGCTGGGAAGTCTTTATATTGGGGACTATATTCCATGGCTTGGTTGGTTGAGCCGTGTCACTGGTTTGGACGCGAAACTAGACAAAGTGGCTAAACGGTTTGATGACTTCTTGGATGTAGTAATTCAAGAGCATATGGATAATACTGATCAGAAGGAGGAGGACCAAAAGGATTTTGTAGACGTTTTACTTGAGATTCAGCAGGAAAAGTCCCTTGGTTTTCGTATTGACAAAATTGGCATAAAGGGTGTCATCTTGGATATGTTCCTTGCTGGGACGGATACGGTAGCAACGGTCTTAGAGTGGGCAATGGCTGAGATTTTAAAGCACCCAAGTGTCATGACCAAATTGCAGAATGAAGTAAGGGGAGTAAACAAAGCTGAAGAAGACATACTAACAGAGGATGATTTGATCGATATGCATTACTTGAAGGCAGTGATTAAGGAGACTCTTCGCTTGCATCCTCCGCTTACGCTACTAATGCCTAGAATCTCGATGCAAGATGTGAAAATAAACGGTTACAACATTAAAGCCAACACACAAGTCCTAGTGAATGTCTGGCAGATCGGGAGAGATTCTGAATCATTCAATTACAAACCAGAGGAGTTTGAGCCAGAAAGGTTCTTGAATGCGAATAGTGGTATAAGTTATAAAGGGACTGACTTTGAATTGATTCCGTTTGGAGCTGGCAGGAGGTTGTGTCCCGGGATTCAGTTTGCTTCGGCAGTTGATGAGATTGCTCTAGCAAATTTAATGCACAAGTTTGATTGGACATTACCTGGTGGAGTAACAATTGAGGATATAGACATGACTGAAACAGCTGGTATAACAGCTCACAAAAGAGACTCTCTTAAGGTCGTTGCTATTCCATATTCATCGGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030684 GO:0030686 GO:0030687 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043021 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044877 GO:0046483 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BOP1NT WD40

Protein Analysis

517

Amino Acids

58.08

Weight (kDa)

5.9

Isoelectric Point (pI)

37.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	49 - 503	2.4e-94	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002914)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40360 AT2G40360
fragaria_vesca	FvH4_5g21650 FvH4_5g21650 FvH4_5g21650
malus_domestica	MD05G1062400.v1.1 MD10G1070100.v1.1
prunus_persica	Prupe.6G114000_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1
pyrus_communis	pycom05g05370 pycom05g05390 pycom10g05570
rosa_chinensis	RchiOBHm_Chr7g0209131 RchiOBHm_Chr7g0241521 RchiOBHm_Chr7g0241531 RchiOBHm_Chr7g0241541
rosa_laevigata	RLG00000000568
rosa_multiflora	Rmu_sc0000821.1_g000025 Rmu_sc0002268.1_g000023
rosa_roxburghii	Rroxscaffold_3G00218950 Rroxscaffold_3G00249700
rosa_rugosa	Rorug07G0109700 Rorug07G0109800 Rorug07G0345000
rosa_samantha	Rh7AG243600 Rh7AG499500 Rh7AG499600 Rh7BG238700 Rh7BG470600 Rh7BG470700 Rh7CG259100 Rh7DG250600 Rh7DG484000 Rh7DG484200
rosa_wichuraiana	Rw7G020660 Rw7G042200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1320
AccB7I	CCANNNNNTGG	1 cut(s)	710
AccI	GTMKAC	1 cut(s)	849
AccII	CGCG	2 cut(s)	492, 743
AciI	CCGC	6 cut(s)	41, 209, 417, 490, 492, 1136
AclWI	GGATC	1 cut(s)	666
AcoI	YGGCCR	1 cut(s)	300
AcsI	RAATTY	2 cut(s)	556, 1417
AcuI	CTGAAG	1 cut(s)	1071
AfaI	GTAC	1 cut(s)	75
AfiI	CCNNNNNNNGG	2 cut(s)	173, 710
AflII	CTTAAG	1 cut(s)	1520
AgsI	TTSAA	7 cut(s)	69, 457, 797, 1099, 1258, 1297, 1337
AhlI	ACTAGT	1 cut(s)	190
AjnI	CCWGG	1 cut(s)	1447
AjuI	GAANNNNNNNTTGG	2 cut(s)	867, 899
AleI	CACNNNNGTG	2 cut(s)	202, 1002
AluBI	AGCT	7 cut(s)	9, 379, 649, 1049, 1355, 1490, 1502
AluI	AGCT	7 cut(s)	9, 379, 649, 1049, 1355, 1490, 1502
Alw21I	GWGCWC	2 cut(s)	313, 470
Alw26I	GTCTC	6 cut(s)	199, 240, 298, 601, 1109, 1506
AlwI	GGATC	1 cut(s)	666
Ama87I	CYCGRG	2 cut(s)	598, 1373
AoxI	GGCC	3 cut(s)	247, 300, 353
ApeKI	GCWGC	1 cut(s)	348
ApoI	RAATTY	2 cut(s)	556, 1417
Asp700I	GAANNNNTTC	1 cut(s)	1341
AspS9I	GGNCC	4 cut(s)	241, 248, 354, 832
AsuC2I	CCSGG	2 cut(s)	1374, 1375
AsuHPI	GGTGA	3 cut(s)	135, 176, 189
AvaI	CYCGRG	2 cut(s)	598, 1373
AvaII	GGWCC	2 cut(s)	241, 832
BarI	GAAGNNNNNNTAC	2 cut(s)	1044, 1076
BbsI	GAAGAC	3 cut(s)	105, 361, 1062
Bbv12I	GWGCWC	2 cut(s)	313, 470
BbvI	GCAGC	1 cut(s)	360
BccI	CCATC	2 cut(s)	176, 626
BceAI	ACGGC	1 cut(s)	708
BciT130I	CCWGG	1 cut(s)	1449
BciVI	GTATCC	1 cut(s)	943
BclI	TGATCA	2 cut(s)	522, 817
BcnI	CCSGG	2 cut(s)	1374, 1375
BcoDI	GTCTC	6 cut(s)	199, 240, 298, 601, 1109, 1506
BcuI	ACTAGT	1 cut(s)	190
BfaI	CTAG	7 cut(s)	6, 191, 611, 749, 1155, 1217, 1412
BfmI	CTRYAG	2 cut(s)	346, 625
BfrI	CTTAAG	1 cut(s)	1520
BfuI	GTATCC	1 cut(s)	943
BisI	GCNGC	3 cut(s)	349, 418, 493
BlsI	GCNGC	3 cut(s)	350, 419, 494
BmcAI	AGTACT	1 cut(s)	75
Bme1390I	CCNGG	3 cut(s)	1374, 1375, 1449
Bme18I	GGWCC	2 cut(s)	241, 832
BmeT110I	CYCGRG	2 cut(s)	598, 1373
BmgT120I	GGNCC	4 cut(s)	241, 248, 354, 832
BmiI	GGNNCC	1 cut(s)	229
BmrFI	CCNGG	3 cut(s)	1374, 1375, 1449
BmsI	GCATC	3 cut(s)	558, 1138, 1155
BpiI	GAAGAC	3 cut(s)	105, 361, 1062
BplI	GAGNNNNNCTC	2 cut(s)	592, 624
Bpu10I	CCTNAGC	1 cut(s)	312
BpuEI	CTTGAG	1 cut(s)	881
BpuMI	CCSGG	2 cut(s)	1374, 1375
Bsa29I	ATCGAT	1 cut(s)	1083
BsaJI	CCNNGG	7 cut(s)	200, 244, 303, 490, 704, 883, 1373
BsaXI	ACNNNNNCTCC	4 cut(s)	147, 177, 1354, 1384
Bsc4I	CCNNNNNNNGG	2 cut(s)	173, 710
Bse1I	ACTGG	1 cut(s)	736
Bse3DI	GCAATG	1 cut(s)	984
BseBI	CCWGG	1 cut(s)	1449
BseCI	ATCGAT	1 cut(s)	1083
BseDI	CCNNGG	7 cut(s)	200, 244, 303, 490, 704, 883, 1373
BseGI	GGATG	3 cut(s)	790, 1078, 1129
BseLI	CCNNNNNNNGG	2 cut(s)	173, 710
BseMI	GCAATG	1 cut(s)	984
BseMII	CTCAG	3 cut(s)	251, 326, 975
BseNI	ACTGG	1 cut(s)	736
BseRI	GAGGAG	4 cut(s)	251, 518, 842, 1286
BseX3I	CGGCCG	1 cut(s)	300
BseXI	GCAGC	1 cut(s)	360
BseYI	CCCAGC	2 cut(s)	673, 941
Bsh1236I	CGCG	2 cut(s)	492, 743
Bsh1285I	CGRYCG	1 cut(s)	303
BshFI	GGCC	3 cut(s)	249, 302, 355
BshVI	ATCGAT	1 cut(s)	1083
BsiEI	CGRYCG	1 cut(s)	303
BsiHKAI	GWGCWC	2 cut(s)	313, 470
BsiHKCI	CYCGRG	2 cut(s)	598, 1373
BsiSI	CCGG	1 cut(s)	1374
BslFI	GGGAC	7 cut(s)	263, 551, 707, 865, 958, 1339, 1356
BslI	CCNNNNNNNGG	2 cut(s)	173, 710
BsmAI	GTCTC	6 cut(s)	199, 240, 298, 601, 1109, 1506
BsmBI	CGTCTC	2 cut(s)	298, 601
BsmFI	GGGAC	7 cut(s)	263, 551, 707, 865, 958, 1339, 1356
BsmI	GAATGC	1 cut(s)	1303
BsnI	GGCC	3 cut(s)	249, 302, 355
BsoBI	CYCGRG	2 cut(s)	598, 1373
Bsp1286I	GDGCHC	2 cut(s)	313, 470
Bsp143I	GATC	7 cut(s)	48, 318, 522, 658, 817, 1080, 1233
Bsp19I	CCATGG	2 cut(s)	244, 704
BspACI	CCGC	6 cut(s)	41, 209, 417, 490, 492, 1136
BspANI	GGCC	3 cut(s)	249, 302, 355
BspCNI	CTCAG	3 cut(s)	250, 325, 976
BspDI	ATCGAT	1 cut(s)	1083
BspFNI	CGCG	2 cut(s)	492, 743
BspHI	TCATGA	2 cut(s)	321, 1008
BspLI	GGNNCC	1 cut(s)	229
BspMAI	CTGCAG	1 cut(s)	350
BspPI	GGATC	1 cut(s)	666
BspTI	CTTAAG	1 cut(s)	1520
BsrDI	GCAATG	1 cut(s)	984
BsrI	ACTGG	1 cut(s)	736
BssECI	CCNNGG	7 cut(s)	200, 244, 303, 490, 704, 883, 1373
BssMI	GATC	7 cut(s)	48, 318, 522, 658, 817, 1080, 1233
BssT1I	CCWWGG	3 cut(s)	244, 704, 883
Bst2UI	CCWGG	1 cut(s)	1449
Bst4CI	ACNGT	6 cut(s)	204, 367, 768, 955, 964, 1187
Bst6I	CTCTTC	2 cut(s)	611, 1125
BstAFI	CTTAAG	1 cut(s)	1520
BstC8I	GCNNGC	3 cut(s)	353, 1127, 1357
BstDEI	CTNAG	4 cut(s)	237, 312, 967, 984
BstDSI	CCRYGG	4 cut(s)	200, 244, 490, 704
BstF5I	GGATG	3 cut(s)	790, 1078, 1129
BstFNI	CGCG	2 cut(s)	492, 743
BstKTI	GATC	7 cut(s)	51, 321, 525, 661, 820, 1083, 1236
BstMAI	GTCTC	6 cut(s)	199, 240, 298, 601, 1109, 1506
BstMBI	GATC	7 cut(s)	48, 318, 522, 658, 817, 1080, 1233
BstMCI	CGRYCG	1 cut(s)	303
BstMWI	GCNNNNNNNGC	4 cut(s)	308, 577, 1135, 1150
BstNI	CCWGG	1 cut(s)	1449
BstSCI	CCNGG	3 cut(s)	1372, 1373, 1447
BstSFI	CTRYAG	2 cut(s)	346, 625
BstUI	CGCG	2 cut(s)	492, 743
BstV1I	GCAGC	1 cut(s)	360
BstV2I	GAAGAC	3 cut(s)	105, 361, 1062
BstZI	CGGCCG	1 cut(s)	300
Bsu15I	ATCGAT	1 cut(s)	1083
BsuI	GTATCC	1 cut(s)	943
BsuRI	GGCC	3 cut(s)	249, 302, 355
BsuTUI	ATCGAT	1 cut(s)	1083
BtgI	CCRYGG	4 cut(s)	200, 244, 490, 704
BtgZI	GCGATG	1 cut(s)	200
BtsCI	GGATG	3 cut(s)	790, 1078, 1129
BtsI	GCAGTG	1 cut(s)	1110
BtsIMutI	CAGTG	2 cut(s)	729, 1110
Cac8I	GCNNGC	3 cut(s)	353, 1127, 1357
CciI	TCATGA	2 cut(s)	321, 1008
Cfr13I	GGNCC	4 cut(s)	241, 248, 354, 832
Cfr42I	CCGCGG	1 cut(s)	493
Cfr9I	CCCGGG	1 cut(s)	1373
ClaI	ATCGAT	1 cut(s)	1083
CseI	GACGC	3 cut(s)	265, 586, 749
CsiI	ACCWGGT	1 cut(s)	1447
Csp6I	GTAC	1 cut(s)	74
CspCI	CAANNNNNGTGG	2 cut(s)	381, 416
CviAII	CATG	8 cut(s)	245, 256, 322, 332, 520, 705, 1009, 1477
CviQI	GTAC	1 cut(s)	74
DdeI	CTNAG	4 cut(s)	237, 312, 967, 984
DpnI	GATC	7 cut(s)	50, 320, 524, 660, 819, 1082, 1235
DpnII	GATC	7 cut(s)	48, 318, 522, 658, 817, 1080, 1233
DraI	TTTAAA	2 cut(s)	643, 993
EaeI	YGGCCR	1 cut(s)	300
EagI	CGGCCG	1 cut(s)	300
Eam1104I	CTCTTC	2 cut(s)	611, 1125
EarI	CTCTTC	2 cut(s)	611, 1125
EciI	GGCGGA	2 cut(s)	56, 198
EclXI	CGGCCG	1 cut(s)	300
Eco130I	CCWWGG	3 cut(s)	244, 704, 883
Eco47I	GGWCC	2 cut(s)	241, 832
Eco52I	CGGCCG	1 cut(s)	300
Eco57I	CTGAAG	1 cut(s)	1071
Eco88I	CYCGRG	2 cut(s)	598, 1373
EcoRII	CCWGG	1 cut(s)	1447
EcoT14I	CCWWGG	3 cut(s)	244, 704, 883
EcoT22I	ATGCAT	1 cut(s)	1092
ErhI	CCWWGG	3 cut(s)	244, 704, 883
Esp3I	CGTCTC	2 cut(s)	298, 601
FaeI	CATG	8 cut(s)	248, 259, 325, 335, 523, 708, 1012, 1480
FaqI	GGGAC	7 cut(s)	263, 551, 707, 865, 958, 1339, 1356
FatI	CATG	8 cut(s)	244, 255, 321, 331, 519, 704, 1008, 1476
FauNDI	CATATG	2 cut(s)	446, 804
FbaI	TGATCA	2 cut(s)	522, 817
FblI	GTMKAC	1 cut(s)	849
Fnu4HI	GCNGC	3 cut(s)	349, 418, 493
FokI	GGATG	3 cut(s)	797, 1085, 1116
Fsp4HI	GCNGC	3 cut(s)	349, 418, 493
FspBI	CTAG	7 cut(s)	6, 191, 611, 749, 1155, 1217, 1412
GluI	GCNGC	3 cut(s)	349, 418, 493
GsaI	CCCAGC	2 cut(s)	677, 945
HaeIII	GGCC	3 cut(s)	249, 302, 355
HapII	CCGG	1 cut(s)	1374
HgaI	GACGC	3 cut(s)	265, 586, 749
Hin1II	CATG	8 cut(s)	248, 259, 325, 335, 523, 708, 1012, 1480
HindIII	AAGCTT	1 cut(s)	377
HpaII	CCGG	1 cut(s)	1374
HphI	GGTGA	3 cut(s)	135, 176, 189
Hpy166II	GTNNAC	3 cut(s)	363, 850, 1042
Hpy188I	TCNGA	4 cut(s)	176, 272, 822, 1249
Hpy188III	TCNNGA	8 cut(s)	322, 598, 600, 797, 1009, 1162, 1237, 1294
Hpy8I	GTNNAC	3 cut(s)	363, 850, 1042
HpyAV	CCTTC	4 cut(s)	159, 191, 817, 1093
HpyCH4III	ACNGT	6 cut(s)	204, 367, 768, 955, 964, 1187
HpyCH4IV	ACGT	1 cut(s)	852
HpyCH4V	TGCA	7 cut(s)	31, 348, 1021, 1090, 1129, 1168, 1426
HpyF10VI	GCNNNNNNNGC	4 cut(s)	308, 577, 1135, 1150
HpyF3I	CTNAG	4 cut(s)	237, 312, 967, 984
HpySE526I	ACGT	1 cut(s)	852
Hsp92II	CATG	8 cut(s)	248, 259, 325, 335, 523, 708, 1012, 1480
Ksp22I	TGATCA	2 cut(s)	522, 817
KspI	CCGCGG	1 cut(s)	493
Kzo9I	GATC	7 cut(s)	48, 318, 522, 658, 817, 1080, 1233
LmnI	GCTCC	4 cut(s)	43, 227, 264, 1352
Lsp1109I	GCAGC	1 cut(s)	360
LweI	GCATC	3 cut(s)	558, 1138, 1155
MabI	ACCWGGT	1 cut(s)	1447
MaeI	CTAG	7 cut(s)	6, 191, 611, 749, 1155, 1217, 1412
MaeII	ACGT	1 cut(s)	852
MaeIII	GTNAC	4 cut(s)	620, 727, 1187, 1456
MalI	GATC	7 cut(s)	50, 320, 524, 660, 819, 1082, 1235
MboI	GATC	7 cut(s)	48, 318, 522, 658, 817, 1080, 1233
MboII	GAAGA	7 cut(s)	82, 105, 361, 628, 1064, 1067, 1112
MfeI	CAATTG	1 cut(s)	1461
MhlI	GDGCHC	2 cut(s)	313, 470
MluCI	AATT	9 cut(s)	340, 556, 792, 903, 1016, 1258, 1337, 1417, 1461
MlyI	GAGTC	3 cut(s)	533, 1111, 1508
Mph1103I	ATGCAT	1 cut(s)	1092
MroXI	GAANNNNTTC	1 cut(s)	1341
MseI	TTAA	9 cut(s)	438, 560, 642, 992, 1110, 1197, 1421, 1521, 1552
MslI	CAYNNNNRTG	3 cut(s)	202, 449, 1002
MspA1I	CMGCKG	2 cut(s)	492, 1490
MspCI	CTTAAG	1 cut(s)	1520
MspI	CCGG	1 cut(s)	1374
MspR9I	CCNGG	3 cut(s)	1374, 1375, 1449
MunI	CAATTG	1 cut(s)	1461
Mva1269I	GAATGC	1 cut(s)	1303
MvaI	CCWGG	1 cut(s)	1449
MvnI	CGCG	2 cut(s)	492, 743
MwoI	GCNNNNNNNGC	4 cut(s)	308, 577, 1135, 1150
NciI	CCSGG	2 cut(s)	1374, 1375
NcoI	CCATGG	2 cut(s)	244, 704
NdeI	CATATG	2 cut(s)	446, 804
NdeII	GATC	7 cut(s)	48, 318, 522, 658, 817, 1080, 1233
NlaIII	CATG	8 cut(s)	248, 259, 325, 335, 523, 708, 1012, 1480
NlaIV	GGNNCC	1 cut(s)	229
NmeAIII	GCCGAG	1 cut(s)	328
NmuCI	GTSAC	1 cut(s)	727
NsiI	ATGCAT	1 cut(s)	1092
OliI	CACNNNNGTG	2 cut(s)	202, 1002
PaeR7I	CTCGAG	1 cut(s)	598
PagI	TCATGA	2 cut(s)	321, 1008
PctI	GAATGC	1 cut(s)	1303
PdmI	GAANNNNTTC	1 cut(s)	1341
PfeI	GAWTC	7 cut(s)	457, 865, 1158, 1244, 1250, 1342, 1378
PflMI	CCANNNNNTGG	1 cut(s)	710
PkrI	GCNGC	3 cut(s)	350, 419, 494
PleI	GAGTC	3 cut(s)	533, 1111, 1508
PpsI	GAGTC	3 cut(s)	533, 1111, 1508
PsiI	TTATAA	1 cut(s)	1320
Psp6I	CCWGG	1 cut(s)	1447
PspFI	CCCAGC	2 cut(s)	673, 941
PspGI	CCWGG	1 cut(s)	1447
PspN4I	GGNNCC	1 cut(s)	229
PspPI	GGNCC	4 cut(s)	241, 248, 354, 832
PstI	CTGCAG	1 cut(s)	350
PvuII	CAGCTG	1 cut(s)	1490
RsaI	GTAC	1 cut(s)	75
RsaNI	GTAC	1 cut(s)	74
RseI	CAYNNNNRTG	3 cut(s)	202, 449, 1002
SacII	CCGCGG	1 cut(s)	493
SaqAI	TTAA	9 cut(s)	438, 560, 642, 992, 1110, 1197, 1421, 1521, 1552
SatI	GCNGC	3 cut(s)	349, 418, 493
Sau3AI	GATC	7 cut(s)	48, 318, 522, 658, 817, 1080, 1233
Sau96I	GGNCC	4 cut(s)	241, 248, 354, 832
ScaI	AGTACT	1 cut(s)	75
SchI	GAGTC	3 cut(s)	533, 1111, 1508
ScrFI	CCNGG	3 cut(s)	1374, 1375, 1449
SduI	GDGCHC	2 cut(s)	313, 470
SexAI	ACCWGGT	1 cut(s)	1447
SfaNI	GCATC	3 cut(s)	558, 1138, 1155
SfcI	CTRYAG	2 cut(s)	346, 625
Sfr274I	CTCGAG	1 cut(s)	598
Sfr303I	CCGCGG	1 cut(s)	493
SgrBI	CCGCGG	1 cut(s)	493
SinI	GGWCC	2 cut(s)	241, 832
SlaI	CTCGAG	1 cut(s)	598
SmaI	CCCGGG	1 cut(s)	1375
SmiMI	CAYNNNNRTG	3 cut(s)	202, 449, 1002
SmlI	CTYRAG	3 cut(s)	598, 860, 1520
SmoI	CTYRAG	3 cut(s)	598, 860, 1520
SpeI	ACTAGT	1 cut(s)	190
Sse9I	AATT	9 cut(s)	340, 556, 792, 903, 1016, 1258, 1337, 1417, 1461
SsiI	CCGC	6 cut(s)	41, 209, 417, 490, 492, 1136
SspMI	CTAG	7 cut(s)	6, 191, 611, 749, 1155, 1217, 1412
StyD4I	CCNGG	3 cut(s)	1372, 1373, 1447
StyI	CCWWGG	3 cut(s)	244, 704, 883
TaaI	ACNGT	6 cut(s)	204, 367, 768, 955, 964, 1187
TaiI	ACGT	1 cut(s)	855
TaqI	TCGA	3 cut(s)	599, 1083, 1163
TaqII	GACCGA	1 cut(s)	471
TasI	AATT	9 cut(s)	340, 556, 792, 903, 1016, 1258, 1337, 1417, 1461
TatI	WGTACW	1 cut(s)	73
TauI	GCSGC	2 cut(s)	420, 495
TfiI	GAWTC	7 cut(s)	457, 865, 1158, 1244, 1250, 1342, 1378
Tru1I	TTAA	9 cut(s)	438, 560, 642, 992, 1110, 1197, 1421, 1521, 1552
Tru9I	TTAA	9 cut(s)	438, 560, 642, 992, 1110, 1197, 1421, 1521, 1552
TscAI	CASTG	2 cut(s)	736, 1110
TseFI	GTSAC	1 cut(s)	727
TseI	GCWGC	1 cut(s)	348
Tsp45I	GTSAC	1 cut(s)	727
TspDTI	ATGAA	4 cut(s)	72, 338, 1041, 1533
TspGWI	ACGGA	3 cut(s)	680, 962, 1335
TspMI	CCCGGG	1 cut(s)	1373
TspRI	CASTG	2 cut(s)	736, 1110
Van91I	CCANNNNNTGG	1 cut(s)	710
Vha464I	CTTAAG	1 cut(s)	1520
VpaK11BI	GGWCC	2 cut(s)	241, 832
XapI	RAATTY	2 cut(s)	556, 1417
XcmI	CCANNNNNNNNNTGG	1 cut(s)	711
XhoI	CTCGAG	1 cut(s)	598
XmaI	CCCGGG	1 cut(s)	1373
XmiI	GTMKAC	1 cut(s)	849
XmnI	GAANNNNTTC	1 cut(s)	1341
XspI	CTAG	7 cut(s)	6, 191, 611, 749, 1155, 1217, 1412
ZrmI	AGTACT	1 cut(s)	75
Zsp2I	ATGCAT	1 cut(s)	1092

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.