Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002914

Physical Location & Seq

Genomic Coordinates Forward (+)

67600884 .. 67605831

Gene Structure 4948 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ21642

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1596 bp

ATGTCTGGTGGTGAAGGATCTGACTTAGAGGATTATCCATCAATCAGAGACACAGACTCGGAAGATGAAGAGAGTGGTTCCTCTGAAAATGAGGGTGAGCTCAACACCAGCAGAAATGATGGTTTGGCCATTGATCATGGTAATGAGGAGGAAAGTGATAGTTCTGGACTTCATGAAGCAGTCGAGGAAAGTGATTCATCTGAAGATGATGAGGTTGCTCCCCGAAATACAATTGGTGCTGTTCCCTTGGAGTGGTATCGGGATGAGAAACATATTGGTTATGATCTTACAGGGAAGAAGATTAAAAAGAAGGAAAGAGAAGATAAATTACAATCCTTTCTTGCTAGTGCTGATGATTCCAAAAATTGGCGCAAATTTTTGGATGAATACAATGACGAGGAAGTAGAAGTGACAAAAGAAGATATGAAAACTATAAATAGATTGCTTGAAGGAAAGGCGCCACACGGTGACTTTGATCCATATGCGCCTTATGTTGATTGGTTTAAATGGGATGACTCAAAGCATCCACTGTCAAATGCCCCTGAACCCAAGAGACGATTCATTCCTTCAAAATCTGAAAGTAAACTGGTGAAGAGGTTAGTATTAGCAATTCGGAAGGGTTTAATTAAGCCTACAAAGGATGAAGAAGAGGAAGAAGAAAGTGTTTATCCCTTGTGGGGAGACGACTCTAATTCAACGGAAAAGGATGGTAGCCATTTATCTTACATTCCAGCGCCAAAGCCAAAATTGCCAGGGTATGAGGAGTCCTTCAATCCTCCTCCGGAATTCATCCCAACACAAGAAGAGATTGATGCTTATCAGTTAATGTATGAGGAAGACCGCCCTAAGTTTATACCGAAAAGGTTTACATCTATGAGAAGCATCCCTGCATATGAGAATGCTATTAAGGAGTGCTTCGAAAGATGTTTGGATCTATACTTGTGCCCCAGAGTTCGGAAGAAACGTATCAATATTGATCCTGAATCTCTGAAGCCCAAGCTACCAAGCCGAAAGGATCTCAAGCCTTATCCTGTGAAATGTTATCTAGAGTATAGAGGTCACAAAGACACAGTTACATCAGTTTCCACAGAAGCTTCAGGGCAGTGGATTGCATCAGGTTCATCGGATGGAACTGTGCGTATTTGGGAGGTTGAAACTGGTAGATGTCTCAAACTCTGGGAGATTGGAGAAGCTGTCACATATGTAGCTTGGAATCCCAATCCTGAGTATTCCGTATTGGCTGTCTCTGTGGGACAAGATGTACTTATTCTCAACACTGGTTTTGGGAATGAAGAAGTACAGAAAAAAACTAAAGAACTTCTTTCGGCTGAAAGACCTACCACACCAGATGACACGGCTACCTTCGTGAGCTGGATTCAAGATGAAACACATGAGGGCACCAGGTTAAGACATTTTAAGACTGTGTCTTCAGTGGAATGGCATCGTAGAGGAGACTACTTTTCAACGGTGGTGCCAGCAGATATCCTTTTTAGTGTCAAAATATCATATATGCTCTCTCTCTCTCTCCCTCTCTCTCATATCACTCACTCACTTTTTTTGCATGATCCAATTAGTCATCTCCTTGCATTTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030684 GO:0030686 GO:0030687 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043021 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044877 GO:0046483 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BOP1NT WD40

Protein Analysis

531

Amino Acids

60.58

Weight (kDa)

4.9

Isoelectric Point (pI)

47.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BOP1NT	PF08145	86 - 344	1.9e-100	BOP1NT (NUC169) domain
WD40_CDC20-Fz	PF24807	341 - 418	1.6e-06	CDC20/Fizzy WD40 domain
WD40	PF00400	346 - 382	6.6e-10	WD domain, G-beta repeat
Beta-prop_WDR5	PF25175	347 - 426	7.7e-13	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	349 - 483	1.8e-11	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	349 - 431	6.8e-11	WDHD1 first WD40 domain
Beta-prop_WDR3_1st	PF25173	349 - 420	2.8e-08	WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	350 - 411	7.7e-07	WDR36/Utp21 second beta-propeller domain
WD40_Prp19	PF24814	350 - 413	2.8e-06	Prp19 WD40 domain
EIF3I	PF24805	351 - 423	2.7e-09	EIF3I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002914)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40360 AT2G40360
fragaria_vesca	FvH4_5g21650 FvH4_5g21650 FvH4_5g21650
malus_domestica	MD05G1062400.v1.1 MD10G1070100.v1.1
prunus_persica	Prupe.6G114000_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1
pyrus_communis	pycom05g05370 pycom05g05390 pycom10g05570
rosa_chinensis	RchiOBHm_Chr7g0209131 RchiOBHm_Chr7g0241521 RchiOBHm_Chr7g0241531 RchiOBHm_Chr7g0241541
rosa_laevigata	RLG00000000568
rosa_multiflora	Rmu_sc0000821.1_g000025 Rmu_sc0002268.1_g000023
rosa_roxburghii	Rroxscaffold_3G00218950 Rroxscaffold_3G00249700
rosa_rugosa	Rorug07G0109700 Rorug07G0109800 Rorug07G0345000
rosa_samantha	Rh7AG243600 Rh7AG499500 Rh7AG499600 Rh7BG238700 Rh7BG470600 Rh7BG470700 Rh7CG259100 Rh7DG250600 Rh7DG484000 Rh7DG484200
rosa_wichuraiana	Rw7G020660 Rw7G042200

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	457, 1397, 1471
AccB7I	CCANNNNNTGG	1 cut(s)	366
AccIII	TCCGGA	1 cut(s)	781
AciI	CCGC	1 cut(s)	841
AclWI	GGATC	6 cut(s)	25, 470, 939, 971, 1023, 1559
AcoI	YGGCCR	1 cut(s)	126
AcsI	RAATTY	2 cut(s)	374, 785
AcuI	CTGAAG	4 cut(s)	222, 1010, 1080, 1413
AcyI	GRCGYC	1 cut(s)	458
AdeI	CACNNNGTG	1 cut(s)	467
AfaI	GTAC	2 cut(s)	1263, 1299
AfiI	CCNNNNNNNGG	4 cut(s)	252, 366, 677, 954
AgsI	TTSAA	7 cut(s)	449, 570, 696, 772, 1154, 1379, 1464
AjnI	CCWGG	2 cut(s)	751, 1400
AjuI	GAANNNNNNNTTGG	2 cut(s)	542, 574
AluBI	AGCT	6 cut(s)	100, 1000, 1094, 1193, 1208, 1371
AluI	AGCT	6 cut(s)	100, 1000, 1094, 1193, 1208, 1371
Alw21I	GWGCWC	1 cut(s)	102
Alw26I	GTCTC	6 cut(s)	42, 547, 675, 1172, 1249, 1446
AlwI	GGATC	6 cut(s)	25, 470, 939, 971, 1023, 1559
Aor13HI	TCCGGA	1 cut(s)	781
AoxI	GGCC	1 cut(s)	126
ApoI	RAATTY	2 cut(s)	374, 785
AspLEI	GCGC	4 cut(s)	372, 460, 487, 736
AsuHPI	GGTGA	4 cut(s)	23, 107, 479, 601
AsuII	TTCGAA	1 cut(s)	918
BaeGI	GKGCMC	2 cut(s)	947, 1400
BalI	TGGCCA	1 cut(s)	128
BanI	GGYRCC	3 cut(s)	457, 1397, 1471
BanII	GRGCYC	1 cut(s)	102
BarI	GAAGNNNNNNTAC	2 cut(s)	312, 344
BbsI	GAAGAC	2 cut(s)	843, 1419
Bbv12I	GWGCWC	1 cut(s)	102
BccI	CCATC	4 cut(s)	46, 113, 701, 1121
BceAI	ACGGC	1 cut(s)	1371
BciT130I	CCWGG	2 cut(s)	753, 1402
BclI	TGATCA	1 cut(s)	133
BcoDI	GTCTC	6 cut(s)	42, 547, 675, 1172, 1249, 1446
BfaI	CTAG	2 cut(s)	345, 1046
BfoI	RGCGCY	2 cut(s)	461, 737
Bme1390I	CCNGG	2 cut(s)	753, 1402
BmiI	GGNNCC	4 cut(s)	79, 459, 1399, 1473
BmrFI	CCNGG	2 cut(s)	753, 1402
BmsI	GCATC	5 cut(s)	532, 802, 891, 1121, 1450
BpiI	GAAGAC	2 cut(s)	843, 1419
Bpu14I	TTCGAA	1 cut(s)	918
BpuEI	CTTGAG	1 cut(s)	1004
BsaBI	GATNNNNATC	1 cut(s)	816
BsaHI	GRCGYC	1 cut(s)	458
BsaJI	CCNNGG	2 cut(s)	246, 752
BsaWI	WCCGGW	1 cut(s)	781
BsaXI	ACNNNNNCTCC	2 cut(s)	1179, 1209
Bsc4I	CCNNNNNNNGG	4 cut(s)	252, 366, 677, 954
Bse1I	ACTGG	3 cut(s)	591, 1162, 1282
Bse8I	GATNNNNATC	1 cut(s)	816
BseAI	TCCGGA	1 cut(s)	781
BseBI	CCWGG	2 cut(s)	753, 1402
BseDI	CCNNGG	2 cut(s)	246, 752
BseGI	GGATG	9 cut(s)	268, 388, 517, 523, 646, 712, 789, 882, 1132
BseJI	GATNNNNATC	1 cut(s)	816
BseLI	CCNNNNNNNGG	4 cut(s)	252, 366, 677, 954
BseMII	CTCAG	1 cut(s)	1215
BseNI	ACTGG	3 cut(s)	591, 1162, 1282
BseRI	GAGGAG	4 cut(s)	161, 768, 776, 1464
BseSI	GKGCMC	2 cut(s)	947, 1400
BshFI	GGCC	1 cut(s)	128
BshNI	GGYRCC	3 cut(s)	457, 1397, 1471
BsiHKAI	GWGCWC	1 cut(s)	102
BsiSI	CCGG	1 cut(s)	782
BslFI	GGGAC	1 cut(s)	1266
BslI	CCNNNNNNNGG	4 cut(s)	252, 366, 677, 954
BsmAI	GTCTC	6 cut(s)	42, 547, 675, 1172, 1249, 1446
BsmBI	CGTCTC	2 cut(s)	547, 675
BsmFI	GGGAC	1 cut(s)	1266
BsmI	GAATGC	1 cut(s)	904
BsnI	GGCC	1 cut(s)	128
Bsp119I	TTCGAA	1 cut(s)	918
Bsp1286I	GDGCHC	3 cut(s)	102, 947, 1400
Bsp13I	TCCGGA	1 cut(s)	781
Bsp143I	GATC	8 cut(s)	17, 133, 283, 475, 931, 976, 1015, 1564
BspACI	CCGC	1 cut(s)	841
BspANI	GGCC	1 cut(s)	128
BspCNI	CTCAG	1 cut(s)	1216
BspEI	TCCGGA	1 cut(s)	781
BspHI	TCATGA	1 cut(s)	172
BspLI	GGNNCC	4 cut(s)	79, 459, 1399, 1473
BspPI	GGATC	6 cut(s)	25, 470, 939, 971, 1023, 1559
BspT104I	TTCGAA	1 cut(s)	918
BspT107I	GGYRCC	3 cut(s)	457, 1397, 1471
BsrI	ACTGG	3 cut(s)	591, 1162, 1282
BssECI	CCNNGG	2 cut(s)	246, 752
BssMI	GATC	8 cut(s)	17, 133, 283, 475, 931, 976, 1015, 1564
BssNI	GRCGYC	1 cut(s)	458
BssT1I	CCWWGG	1 cut(s)	246
Bst2UI	CCWGG	2 cut(s)	753, 1402
Bst4CI	ACNGT	6 cut(s)	467, 531, 1072, 1135, 1423, 1468
Bst6I	CTCTTC	4 cut(s)	63, 587, 642, 798
BstACI	GRCGYC	1 cut(s)	458
BstBI	TTCGAA	1 cut(s)	918
BstC8I	GCNNGC	1 cut(s)	1476
BstDEI	CTNAG	3 cut(s)	25, 846, 1224
BstF5I	GGATG	9 cut(s)	268, 388, 517, 523, 646, 712, 789, 882, 1132
BstH2I	RGCGCY	2 cut(s)	461, 737
BstHHI	GCGC	4 cut(s)	372, 460, 487, 736
BstKTI	GATC	8 cut(s)	20, 136, 286, 478, 934, 979, 1018, 1567
BstMAI	GTCTC	6 cut(s)	42, 547, 675, 1172, 1249, 1446
BstMBI	GATC	8 cut(s)	17, 133, 283, 475, 931, 976, 1015, 1564
BstMWI	GCNNNNNNNGC	1 cut(s)	748
BstNI	CCWGG	2 cut(s)	753, 1402
BstSCI	CCNGG	2 cut(s)	751, 1400
BstSLI	GKGCMC	2 cut(s)	947, 1400
BstV2I	GAAGAC	2 cut(s)	843, 1419
BstX2I	RGATCY	3 cut(s)	17, 931, 1015
BstYI	RGATCY	3 cut(s)	17, 931, 1015
BsuRI	GGCC	1 cut(s)	128
BtsCI	GGATG	9 cut(s)	268, 388, 517, 523, 646, 712, 789, 882, 1132
BtsI	GCAGTG	1 cut(s)	1109
BtsIMutI	CAGTG	4 cut(s)	527, 1109, 1275, 1437
Cac8I	GCNNGC	1 cut(s)	1476
CciI	TCATGA	1 cut(s)	172
CfoI	GCGC	4 cut(s)	372, 460, 487, 736
CsiI	ACCWGGT	1 cut(s)	1400
Csp6I	GTAC	2 cut(s)	1262, 1298
CviAII	CATG	4 cut(s)	137, 173, 1391, 1562
CviQI	GTAC	2 cut(s)	1262, 1298
DdeI	CTNAG	3 cut(s)	25, 846, 1224
DinI	GGCGCC	1 cut(s)	459
DpnI	GATC	8 cut(s)	19, 135, 285, 477, 933, 978, 1017, 1566
DpnII	GATC	8 cut(s)	17, 133, 283, 475, 931, 976, 1015, 1564
DraI	TTTAAA	1 cut(s)	505
DraIII	CACNNNGTG	1 cut(s)	467
EaeI	YGGCCR	1 cut(s)	126
Eam1104I	CTCTTC	4 cut(s)	63, 587, 642, 798
EarI	CTCTTC	4 cut(s)	63, 587, 642, 798
Ecl136II	GAGCTC	1 cut(s)	100
Eco130I	CCWWGG	1 cut(s)	246
Eco24I	GRGCYC	1 cut(s)	102
Eco32I	GATATC	1 cut(s)	1483
Eco53kI	GAGCTC	1 cut(s)	100
Eco57I	CTGAAG	4 cut(s)	222, 1010, 1080, 1413
EcoICRI	GAGCTC	1 cut(s)	100
EcoRI	GAATTC	1 cut(s)	785
EcoRII	CCWGG	2 cut(s)	751, 1400
EcoRV	GATATC	1 cut(s)	1483
EcoT14I	CCWWGG	1 cut(s)	246
EcoT38I	GRGCYC	1 cut(s)	102
EgeI	GGCGCC	1 cut(s)	459
EheI	GGCGCC	1 cut(s)	459
ErhI	CCWWGG	1 cut(s)	246
Esp3I	CGTCTC	2 cut(s)	547, 675
FaeI	CATG	4 cut(s)	140, 176, 1394, 1565
FalI	AAGNNNNNCTT	6 cut(s)	899, 931, 1248, 1280, 1305, 1337
FaqI	GGGAC	1 cut(s)	1266
FatI	CATG	4 cut(s)	136, 172, 1390, 1561
FauNDI	CATATG	3 cut(s)	481, 892, 1201
FbaI	TGATCA	1 cut(s)	133
FokI	GGATG	9 cut(s)	275, 395, 510, 524, 653, 719, 776, 869, 1139
FriOI	GRGCYC	1 cut(s)	102
FspBI	CTAG	2 cut(s)	345, 1046
GlaI	GCGC	4 cut(s)	371, 459, 486, 735
HaeII	RGCGCY	2 cut(s)	461, 737
HaeIII	GGCC	1 cut(s)	128
HapII	CCGG	1 cut(s)	782
HhaI	GCGC	4 cut(s)	372, 460, 487, 736
Hin1I	GRCGYC	1 cut(s)	458
Hin1II	CATG	4 cut(s)	140, 176, 1394, 1565
Hin6I	GCGC	4 cut(s)	370, 458, 485, 734
HinP1I	GCGC	4 cut(s)	370, 458, 485, 734
HindIII	AAGCTT	1 cut(s)	1092
HpaII	CCGG	1 cut(s)	782
HphI	GGTGA	4 cut(s)	23, 107, 479, 601
Hpy166II	GTNNAC	2 cut(s)	584, 867
Hpy8I	GTNNAC	2 cut(s)	584, 867
HpyAV	CCTTC	7 cut(s)	8, 304, 443, 576, 610, 778, 1372
HpyCH4III	ACNGT	6 cut(s)	467, 531, 1072, 1135, 1423, 1468
HpyCH4IV	ACGT	1 cut(s)	964
HpyCH4V	TGCA	4 cut(s)	890, 1112, 1561, 1586
HpyF10VI	GCNNNNNNNGC	1 cut(s)	748
HpyF3I	CTNAG	3 cut(s)	25, 846, 1224
HpySE526I	ACGT	1 cut(s)	964
Hsp92I	GRCGYC	1 cut(s)	458
Hsp92II	CATG	4 cut(s)	140, 176, 1394, 1565
HspAI	GCGC	4 cut(s)	370, 458, 485, 734
KasI	GGCGCC	1 cut(s)	457
Kpn2I	TCCGGA	1 cut(s)	781
Ksp22I	TGATCA	1 cut(s)	133
Kzo9I	GATC	8 cut(s)	17, 133, 283, 475, 931, 976, 1015, 1564
LmnI	GCTCC	1 cut(s)	223
LweI	GCATC	5 cut(s)	532, 802, 891, 1121, 1450
MabI	ACCWGGT	1 cut(s)	1400
MaeI	CTAG	2 cut(s)	345, 1046
MaeII	ACGT	1 cut(s)	964
MaeIII	GTNAC	5 cut(s)	409, 467, 1058, 1072, 1195
MalI	GATC	8 cut(s)	19, 135, 285, 477, 933, 978, 1017, 1566
MboI	GATC	8 cut(s)	17, 133, 283, 475, 931, 976, 1015, 1564
MfeI	CAATTG	1 cut(s)	231
MflI	RGATCY	3 cut(s)	17, 931, 1015
MhlI	GDGCHC	3 cut(s)	102, 947, 1400
MlsI	TGGCCA	1 cut(s)	128
MluNI	TGGCCA	1 cut(s)	128
Mly113I	GGCGCC	1 cut(s)	458
MlyI	GAGTC	4 cut(s)	50, 509, 680, 773
Mox20I	TGGCCA	1 cut(s)	128
MroI	TCCGGA	1 cut(s)	781
MscI	TGGCCA	1 cut(s)	128
MseI	TTAA	8 cut(s)	303, 504, 623, 627, 824, 906, 1406, 1416
MslI	CAYNNNNRTG	1 cut(s)	141
Msp20I	TGGCCA	1 cut(s)	128
MspI	CCGG	1 cut(s)	782
MspR9I	CCNGG	2 cut(s)	753, 1402
MunI	CAATTG	1 cut(s)	231
Mva1269I	GAATGC	1 cut(s)	904
MvaI	CCWGG	2 cut(s)	753, 1402
MwoI	GCNNNNNNNGC	1 cut(s)	748
NarI	GGCGCC	1 cut(s)	458
NdeI	CATATG	3 cut(s)	481, 892, 1201
NdeII	GATC	8 cut(s)	17, 133, 283, 475, 931, 976, 1015, 1564
NlaIII	CATG	4 cut(s)	140, 176, 1394, 1565
NlaIV	GGNNCC	4 cut(s)	79, 459, 1399, 1473
NmuCI	GTSAC	4 cut(s)	409, 467, 1058, 1195
NspV	TTCGAA	1 cut(s)	918
PacI	TTAATTAA	1 cut(s)	627
PagI	TCATGA	1 cut(s)	172
PcsI	WCGNNNNNNNCGW	1 cut(s)	961
PctI	GAATGC	1 cut(s)	904
PfeI	GAWTC	6 cut(s)	194, 356, 558, 983, 1213, 1375
PflFI	GACNNNGTC	1 cut(s)	1423
PflMI	CCANNNNNTGG	1 cut(s)	366
PleI	GAGTC	4 cut(s)	50, 509, 680, 772
PluTI	GGCGCC	1 cut(s)	461
PpsI	GAGTC	4 cut(s)	50, 509, 680, 772
Psp124BI	GAGCTC	1 cut(s)	102
Psp6I	CCWGG	2 cut(s)	751, 1400
PspGI	CCWGG	2 cut(s)	751, 1400
PspN4I	GGNNCC	4 cut(s)	79, 459, 1399, 1473
PsuI	RGATCY	3 cut(s)	17, 931, 1015
PsyI	GACNNNGTC	1 cut(s)	1423
RsaI	GTAC	2 cut(s)	1263, 1299
RsaNI	GTAC	2 cut(s)	1262, 1298
RseI	CAYNNNNRTG	1 cut(s)	141
SacI	GAGCTC	1 cut(s)	102
SaqAI	TTAA	8 cut(s)	303, 504, 623, 627, 824, 906, 1406, 1416
Sau3AI	GATC	8 cut(s)	17, 133, 283, 475, 931, 976, 1015, 1564
SchI	GAGTC	4 cut(s)	50, 509, 680, 773
ScrFI	CCNGG	2 cut(s)	753, 1402
SduI	GDGCHC	3 cut(s)	102, 947, 1400
SexAI	ACCWGGT	1 cut(s)	1400
SfaNI	GCATC	5 cut(s)	532, 802, 891, 1121, 1450
SfoI	GGCGCC	1 cut(s)	459
SfuI	TTCGAA	1 cut(s)	918
SmiMI	CAYNNNNRTG	1 cut(s)	141
SmlI	CTYRAG	1 cut(s)	1019
SmoI	CTYRAG	1 cut(s)	1019
SsiI	CCGC	1 cut(s)	841
SspDI	GGCGCC	1 cut(s)	457
SspI	AATATT	1 cut(s)	973
SspMI	CTAG	2 cut(s)	345, 1046
SstI	GAGCTC	1 cut(s)	102
StyD4I	CCNGG	2 cut(s)	751, 1400
StyI	CCWWGG	1 cut(s)	246
TaaI	ACNGT	6 cut(s)	467, 531, 1072, 1135, 1423, 1468
TaiI	ACGT	1 cut(s)	967
TaqI	TCGA	2 cut(s)	183, 918
TatI	WGTACW	2 cut(s)	1261, 1297
TfiI	GAWTC	6 cut(s)	194, 356, 558, 983, 1213, 1375
Tru1I	TTAA	8 cut(s)	303, 504, 623, 627, 824, 906, 1406, 1416
Tru9I	TTAA	8 cut(s)	303, 504, 623, 627, 824, 906, 1406, 1416
TscAI	CASTG	4 cut(s)	534, 1109, 1282, 1437
TseFI	GTSAC	4 cut(s)	409, 467, 1058, 1195
Tsp45I	GTSAC	4 cut(s)	409, 467, 1058, 1195
TspGWI	ACGGA	2 cut(s)	713, 1222
TspRI	CASTG	4 cut(s)	534, 1109, 1282, 1437
Tth111I	GACNNNGTC	1 cut(s)	1423
Van91I	CCANNNNNTGG	1 cut(s)	366
XapI	RAATTY	2 cut(s)	374, 785
XbaI	TCTAGA	1 cut(s)	1045
XspI	CTAG	2 cut(s)	345, 1046

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.