Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0002914

Physical Location & Seq

Genomic Coordinates Forward (+)

8536987 .. 8539772

Gene Structure 2786 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0109700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGGCGGAGCTCATCAACAATGAAACTCTTTCACTTGTACTCGTCGCCGTTTTCCTCATCCTCTTGTACAAGTGGTCTTCTTCCACTTCCAGTAGTACCAAAAACTCACCACCTTCTCCACCAAAACTCCCCATCATCGGAAACCTTCACCAACTAGGCGCTCGAGGAACTCCACCCCATCGCGCACTTCAAGCCTTATCTCGAGTACATGGTCCTCTCATGCTCCTCCATTTCGGAAGCGTCCCCGTCCTCGTCGTCTCGTCGGCCGAGGCTGCCCGGGAGATCATGAAAACCCATGACCTCGCATTCGCCAGCAGACCTAAGTCCACCGCCTTCGAGAAGCTTCTCTACAACTACAAAGACGTGGCAACTGCGCCATACGGTGATTACTGGAGGCAGGTGAAGAGCATATGCGTGCTGAATCTCTTGAGCGCCAAGAAGGTTCGGTCCTTTCGTGGCGTGAGAGAAGAGGAGACCAGATCCATGATCAACAAGATACAGGAAACGTCACGACGGGGAGGAGTTGTGAACGTGAGGAAGATGCTTATGACGCTTACGAACGACGTCGTCTCGAGGGCGGCTCTAGGGAGGAAGTACTACGATGCTGGGGAATTTAAGGAGCTCTCCACCGAATTTACGGAGTTGGCGGGAAGTCTTCATGTTGGAGACTTAATTCCATGGCTTGGTTGGTTGAGCCGTCTTGGTGGTTTGGACGCTAAACTAGTCAGTTTGGCTAAACGGTACGATGAATTTTTGGATTCGGTGCTTCAAGAGCATATTGATAAAACTTCAGACACTAGCAACAGAAATGATCAAGGCCTTGATGATCAGAACGAGGATAACAAGGATTTTGTGGATGTTTTACTTGAAATTCAGCGGGAAAACTTGCTCAATTTTCCTCTTGACAGAGTTAGCATAAAAGGTGTCGTCTTGGATATGTTCCTTGCTGGGACTGATACCACATCTACACTTCTAGAGTGGGCAATGGCAGAGATTTTGAAGCACCCAAGGGTCATGAGCAAATTGCAGAAAGAAGTTAGGGGTGTAATAAAAGGAGAAGAAGAAATATTAACTGAGGATGATTTGGTTGATATGCACTACTTGAAGGCAGTGATTAAGGAGGCTCTTCGCTTACATCCTCCATTTACCCTACTATTGCCAAAGATGTCGACTCAAGATGTGAAAATAAACGGTTATGACATTAAGGCCAACACACAAGTCTTGGTGAATGCCTGGCAGATCGGGAGAGATCCCGAATCATTCAATGACAAACCAGAAGAGTTTGAGCCGGAGAGGTTCTTGGAGGATAATAGTGGTCTAAGTTATAAAGGGACCGACTTCCAGTTTATTCCATTCGGAGCTGGCAGGAGGATCTGTCCCGGGATCCAGTTTGCTACGACTGTCAATGAGATTGCTCTAGCGAATTTGCTGCACAAGTTTGATTGGACATTTCCCGGTGGAGTAAGAAATGAGGATTTAGACATGACTGAATCATCTGGCTTAACAATTCATAAGAAATACCCTCTTAAAGCCGTGGCTATTCCATATTCATCAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030684 GO:0030686 GO:0030687 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043021 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0044877 GO:0046483 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BOP1NT WD40

Protein Analysis

519

Amino Acids

58.22

Weight (kDa)

6.22

Isoelectric Point (pI)

42.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	37 - 507	2.8e-102	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002914)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40360 AT2G40360
fragaria_vesca	FvH4_5g21650 FvH4_5g21650 FvH4_5g21650
malus_domestica	MD05G1062400.v1.1 MD10G1070100.v1.1
prunus_persica	Prupe.6G114000_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1 Prupe.7G053600_v2.0.a1
pyrus_communis	pycom05g05370 pycom05g05390 pycom10g05570
rosa_chinensis	RchiOBHm_Chr7g0209131 RchiOBHm_Chr7g0241521 RchiOBHm_Chr7g0241531 RchiOBHm_Chr7g0241541
rosa_laevigata	RLG00000000568
rosa_multiflora	Rmu_sc0000821.1_g000025 Rmu_sc0002268.1_g000023
rosa_roxburghii	Rroxscaffold_3G00218950 Rroxscaffold_3G00249700
rosa_rugosa	Rorug07G0109700 Rorug07G0109800 Rorug07G0345000
rosa_samantha	Rh7AG243600 Rh7AG499500 Rh7AG499600 Rh7BG238700 Rh7BG470600 Rh7BG470700 Rh7CG259100 Rh7DG250600 Rh7DG484000 Rh7DG484200
rosa_wichuraiana	Rw7G020660 Rw7G042200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1326
AarI	CACCTGC	1 cut(s)	388
AatII	GACGTC	1 cut(s)	567
Acc36I	ACCTGC	1 cut(s)	388
AccB7I	CCANNNNNTGG	1 cut(s)	683
AccI	GTMKAC	1 cut(s)	1169
AccII	CGCG	1 cut(s)	183
AciI	CCGC	5 cut(s)	5, 330, 578, 647, 877
AclWI	GGATC	5 cut(s)	474, 1244, 1378, 1379, 1391
AcoI	YGGCCR	1 cut(s)	264
AcsI	RAATTY	5 cut(s)	611, 632, 749, 870, 1423
AcuI	CTGAAG	1 cut(s)	774
AcyI	GRCGYC	1 cut(s)	564
AfaI	GTAC	6 cut(s)	39, 68, 97, 207, 596, 743
AfiI	CCNNNNNNNGG	2 cut(s)	137, 683
AgsI	TTSAA	6 cut(s)	191, 770, 869, 1000, 1105, 1264
AhlI	ACTAGT	1 cut(s)	721
AjiI	CACGTC	1 cut(s)	364
AjnI	CCWGG	1 cut(s)	1232
AluBI	AGCT	5 cut(s)	10, 343, 622, 1361, 1556
AluI	AGCT	5 cut(s)	10, 343, 622, 1361, 1556
Alw21I	GWGCWC	2 cut(s)	12, 624
Alw26I	GTCTC	4 cut(s)	262, 467, 574, 660
AlwI	GGATC	5 cut(s)	474, 1244, 1378, 1379, 1391
Ama87I	CYCGRG	5 cut(s)	162, 201, 276, 571, 1379
AoxI	GGCC	3 cut(s)	264, 817, 1206
ApeKI	GCWGC	2 cut(s)	272, 1429
ApoI	RAATTY	5 cut(s)	611, 632, 749, 870, 1423
ArsI	GACNNNNNNTTYG	2 cut(s)	290, 322
AspLEI	GCGC	4 cut(s)	161, 185, 376, 434
AspS9I	GGNCC	3 cut(s)	212, 447, 1332
AsuC2I	CCSGG	5 cut(s)	277, 278, 1380, 1381, 1455
AsuHPI	GGTGA	5 cut(s)	99, 140, 395, 412, 1237
AvaI	CYCGRG	5 cut(s)	162, 201, 276, 571, 1379
AvaII	GGWCC	3 cut(s)	212, 447, 1332
BamHI	GGATCC	1 cut(s)	1383
BanII	GRGCYC	2 cut(s)	12, 624
BarI	GAAGNNNNNNTAC	2 cut(s)	332, 364
BbsI	GAAGAC	2 cut(s)	69, 647
Bbv12I	GWGCWC	2 cut(s)	12, 624
BbvI	GCAGC	2 cut(s)	259, 1416
BccI	CCATC	2 cut(s)	140, 186
BceAI	ACGGC	3 cut(s)	32, 681, 1517
BcgI	CGANNNNNNTGC	2 cut(s)	1411, 1445
BciT130I	CCWGG	1 cut(s)	1234
BclI	TGATCA	3 cut(s)	486, 811, 826
BcnI	CCSGG	5 cut(s)	277, 278, 1380, 1381, 1455
BcoDI	GTCTC	4 cut(s)	262, 467, 574, 660
BcuI	ACTAGT	1 cut(s)	721
BfaI	CTAG	6 cut(s)	155, 584, 722, 798, 974, 1418
BfoI	RGCGCY	2 cut(s)	162, 435
BfuAI	ACCTGC	1 cut(s)	388
BisI	GCNGC	3 cut(s)	273, 579, 1430
BlsI	GCNGC	3 cut(s)	274, 580, 1431
BmcAI	AGTACT	1 cut(s)	596
Bme1390I	CCNGG	6 cut(s)	277, 278, 1234, 1380, 1381, 1455
Bme18I	GGWCC	3 cut(s)	212, 447, 1332
BmeT110I	CYCGRG	5 cut(s)	162, 201, 276, 571, 1379
BmgBI	CACGTC	1 cut(s)	364
BmgT120I	GGNCC	3 cut(s)	212, 447, 1332
BmiI	GGNNCC	2 cut(s)	1333, 1385
BmrFI	CCNGG	6 cut(s)	277, 278, 1234, 1380, 1381, 1455
BmsI	GCATC	2 cut(s)	531, 592
BoxI	GACNNNNGTC	1 cut(s)	322
BpiI	GAAGAC	2 cut(s)	69, 647
BplI	GAGNNNNNCTC	2 cut(s)	565, 597
BpmI	CTGGAG	1 cut(s)	412
BpuEI	CTTGAG	2 cut(s)	448, 1158
BpuMI	CCSGG	5 cut(s)	277, 278, 1380, 1381, 1455
BsaHI	GRCGYC	1 cut(s)	564
BsaI	GGTCTC	1 cut(s)	467
BsaJI	CCNNGG	6 cut(s)	267, 276, 677, 1007, 1379, 1533
BsaXI	ACNNNNNCTCC	6 cut(s)	111, 141, 510, 540, 1360, 1390
Bsc4I	CCNNNNNNNGG	2 cut(s)	137, 683
Bse1I	ACTGG	4 cut(s)	90, 395, 1342, 1387
Bse3DI	GCAATG	1 cut(s)	990
BseBI	CCWGG	1 cut(s)	1234
BseDI	CCNNGG	6 cut(s)	267, 276, 677, 1007, 1379, 1533
BseGI	GGATG	4 cut(s)	57, 862, 1084, 1135
BseLI	CCNNNNNNNGG	2 cut(s)	137, 683
BseMI	GCAATG	1 cut(s)	990
BseMII	CTCAG	1 cut(s)	1065
BseNI	ACTGG	4 cut(s)	90, 395, 1342, 1387
BseRI	GAGGAG	3 cut(s)	215, 485, 534
BseX3I	CGGCCG	1 cut(s)	264
BseXI	GCAGC	2 cut(s)	259, 1416
BseYI	CCCAGC	2 cut(s)	605, 947
BsgI	GTGCAG	1 cut(s)	1415
Bsh1236I	CGCG	1 cut(s)	183
Bsh1285I	CGRYCG	1 cut(s)	267
BshFI	GGCC	3 cut(s)	266, 819, 1208
BsiEI	CGRYCG	1 cut(s)	267
BsiHKAI	GWGCWC	2 cut(s)	12, 624
BsiHKCI	CYCGRG	5 cut(s)	162, 201, 276, 571, 1379
BsiSI	CCGG	4 cut(s)	277, 1289, 1380, 1455
BslFI	GGGAC	4 cut(s)	227, 964, 1345, 1362
BslI	CCNNNNNNNGG	2 cut(s)	137, 683
BsmAI	GTCTC	4 cut(s)	262, 467, 574, 660
BsmBI	CGTCTC	2 cut(s)	262, 574
BsmFI	GGGAC	4 cut(s)	227, 964, 1345, 1362
BsmI	GAATGC	2 cut(s)	305, 1234
BsnI	GGCC	3 cut(s)	266, 819, 1208
Bso31I	GGTCTC	1 cut(s)	467
BsoBI	CYCGRG	5 cut(s)	162, 201, 276, 571, 1379
Bsp1286I	GDGCHC	2 cut(s)	12, 624
Bsp1407I	TGTACA	1 cut(s)	66
Bsp143I	GATC	9 cut(s)	282, 479, 486, 811, 826, 1239, 1249, 1371, 1383
Bsp19I	CCATGG	1 cut(s)	677
BspACI	CCGC	5 cut(s)	5, 330, 578, 647, 877
BspANI	GGCC	3 cut(s)	266, 819, 1208
BspCNI	CTCAG	1 cut(s)	1066
BspFNI	CGCG	1 cut(s)	183
BspHI	TCATGA	2 cut(s)	285, 1014
BspLI	GGNNCC	2 cut(s)	1333, 1385
BspMI	ACCTGC	1 cut(s)	388
BspPI	GGATC	5 cut(s)	474, 1244, 1378, 1379, 1391
BspQI	GCTCTTC	2 cut(s)	398, 1131
BspTNI	GGTCTC	1 cut(s)	467
BsrDI	GCAATG	1 cut(s)	990
BsrGI	TGTACA	1 cut(s)	66
BsrI	ACTGG	4 cut(s)	90, 395, 1342, 1387
BssECI	CCNNGG	6 cut(s)	267, 276, 677, 1007, 1379, 1533
BssMI	GATC	9 cut(s)	282, 479, 486, 811, 826, 1239, 1249, 1371, 1383
BssNI	GRCGYC	1 cut(s)	564
BssT1I	CCWWGG	2 cut(s)	677, 1007
Bst2UI	CCWGG	1 cut(s)	1234
Bst4CI	ACNGT	4 cut(s)	383, 741, 1193, 1402
Bst6I	CTCTTC	4 cut(s)	398, 462, 1131, 1272
BstACI	GRCGYC	1 cut(s)	564
BstAUI	TGTACA	1 cut(s)	66
BstC8I	GCNNGC	3 cut(s)	313, 416, 1363
BstDEI	CTNAG	3 cut(s)	321, 1074, 1319
BstDSI	CCRYGG	2 cut(s)	677, 1533
BstF5I	GGATG	4 cut(s)	57, 862, 1084, 1135
BstFNI	CGCG	1 cut(s)	183
BstH2I	RGCGCY	2 cut(s)	162, 435
BstHHI	GCGC	4 cut(s)	161, 185, 376, 434
BstKTI	GATC	9 cut(s)	285, 482, 489, 814, 829, 1242, 1252, 1374, 1386
BstMAI	GTCTC	4 cut(s)	262, 467, 574, 660
BstMBI	GATC	9 cut(s)	282, 479, 486, 811, 826, 1239, 1249, 1371, 1383
BstMCI	CGRYCG	1 cut(s)	267
BstMWI	GCNNNNNNNGC	4 cut(s)	191, 272, 550, 772
BstNI	CCWGG	1 cut(s)	1234
BstPAI	GACNNNNGTC	1 cut(s)	322
BstSCI	CCNGG	6 cut(s)	275, 276, 1232, 1378, 1379, 1453
BstUI	CGCG	1 cut(s)	183
BstV1I	GCAGC	2 cut(s)	259, 1416
BstV2I	GAAGAC	2 cut(s)	69, 647
BstX2I	RGATCY	4 cut(s)	479, 1249, 1371, 1383
BstYI	RGATCY	4 cut(s)	479, 1249, 1371, 1383
BstZI	CGGCCG	1 cut(s)	264
BsuRI	GGCC	3 cut(s)	266, 819, 1208
BtgI	CCRYGG	2 cut(s)	677, 1533
BtgZI	GCGATG	1 cut(s)	164
BtrI	CACGTC	1 cut(s)	364
BtsCI	GGATG	4 cut(s)	57, 862, 1084, 1135
BtsI	GCAGTG	1 cut(s)	1116
BtsIMutI	CAGTG	1 cut(s)	1116
BveI	ACCTGC	1 cut(s)	388
Cac8I	GCNNGC	3 cut(s)	313, 416, 1363
CciI	TCATGA	2 cut(s)	285, 1014
CfoI	GCGC	4 cut(s)	161, 185, 376, 434
Cfr13I	GGNCC	3 cut(s)	212, 447, 1332
Cfr9I	CCCGGG	2 cut(s)	276, 1379
CseI	GACGC	3 cut(s)	229, 559, 722
Csp6I	GTAC	6 cut(s)	38, 67, 96, 206, 595, 742
CviAII	CATG	9 cut(s)	209, 220, 286, 296, 484, 659, 678, 1015, 1483
CviQI	GTAC	6 cut(s)	38, 67, 96, 206, 595, 742
DdeI	CTNAG	3 cut(s)	321, 1074, 1319
DpnI	GATC	9 cut(s)	284, 481, 488, 813, 828, 1241, 1251, 1373, 1385
DpnII	GATC	9 cut(s)	282, 479, 486, 811, 826, 1239, 1249, 1371, 1383
EaeI	YGGCCR	1 cut(s)	264
EagI	CGGCCG	1 cut(s)	264
Eam1104I	CTCTTC	4 cut(s)	398, 462, 1131, 1272
EarI	CTCTTC	4 cut(s)	398, 462, 1131, 1272
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	2 cut(s)	10, 622
EclXI	CGGCCG	1 cut(s)	264
Eco130I	CCWWGG	2 cut(s)	677, 1007
Eco147I	AGGCCT	1 cut(s)	819
Eco24I	GRGCYC	2 cut(s)	12, 624
Eco31I	GGTCTC	1 cut(s)	467
Eco47I	GGWCC	3 cut(s)	212, 447, 1332
Eco52I	CGGCCG	1 cut(s)	264
Eco53kI	GAGCTC	2 cut(s)	10, 622
Eco57I	CTGAAG	1 cut(s)	774
Eco88I	CYCGRG	5 cut(s)	162, 201, 276, 571, 1379
EcoICRI	GAGCTC	2 cut(s)	10, 622
EcoRII	CCWGG	1 cut(s)	1232
EcoT14I	CCWWGG	2 cut(s)	677, 1007
EcoT38I	GRGCYC	2 cut(s)	12, 624
ErhI	CCWWGG	2 cut(s)	677, 1007
Esp3I	CGTCTC	2 cut(s)	262, 574
FaeI	CATG	9 cut(s)	212, 223, 289, 299, 487, 662, 681, 1018, 1486
FaqI	GGGAC	4 cut(s)	227, 964, 1345, 1362
FatI	CATG	9 cut(s)	208, 219, 285, 295, 483, 658, 677, 1014, 1482
FauI	CCCGC	2 cut(s)	640, 870
FauNDI	CATATG	1 cut(s)	410
FbaI	TGATCA	3 cut(s)	486, 811, 826
FblI	GTMKAC	1 cut(s)	1169
Fnu4HI	GCNGC	3 cut(s)	273, 579, 1430
FokI	GGATG	4 cut(s)	44, 869, 1091, 1122
FriOI	GRGCYC	2 cut(s)	12, 624
Fsp4HI	GCNGC	3 cut(s)	273, 579, 1430
FspBI	CTAG	6 cut(s)	155, 584, 722, 798, 974, 1418
GlaI	GCGC	4 cut(s)	160, 184, 375, 433
GluI	GCNGC	3 cut(s)	273, 579, 1430
GsaI	CCCAGC	2 cut(s)	609, 951
GsuI	CTGGAG	1 cut(s)	412
HaeII	RGCGCY	2 cut(s)	162, 435
HaeIII	GGCC	3 cut(s)	266, 819, 1208
HapII	CCGG	4 cut(s)	277, 1289, 1380, 1455
HgaI	GACGC	3 cut(s)	229, 559, 722
HhaI	GCGC	4 cut(s)	161, 185, 376, 434
Hin1I	GRCGYC	1 cut(s)	564
Hin1II	CATG	9 cut(s)	212, 223, 289, 299, 487, 662, 681, 1018, 1486
Hin6I	GCGC	4 cut(s)	159, 183, 374, 432
HinP1I	GCGC	4 cut(s)	159, 183, 374, 432
HincII	GTYRAC	1 cut(s)	1170
HindII	GTYRAC	1 cut(s)	1170
HindIII	AAGCTT	1 cut(s)	341
HinfI	GANTC	5 cut(s)	421, 758, 1171, 1256, 1490
HpaII	CCGG	4 cut(s)	277, 1289, 1380, 1455
HphI	GGTGA	5 cut(s)	99, 140, 395, 412, 1237
Hpy166II	GTNNAC	3 cut(s)	327, 529, 1170
Hpy188I	TCNGA	5 cut(s)	140, 236, 793, 831, 1358
Hpy8I	GTNNAC	3 cut(s)	327, 529, 1170
Hpy99I	CGWCG	6 cut(s)	47, 257, 265, 516, 566, 569
HpyAV	CCTTC	5 cut(s)	123, 155, 343, 433, 1099
HpyCH4III	ACNGT	4 cut(s)	383, 741, 1193, 1402
HpyCH4IV	ACGT	4 cut(s)	363, 506, 531, 564
HpyCH4V	TGCA	3 cut(s)	1027, 1096, 1432
HpyF10VI	GCNNNNNNNGC	4 cut(s)	191, 272, 550, 772
HpyF3I	CTNAG	3 cut(s)	321, 1074, 1319
HpySE526I	ACGT	4 cut(s)	363, 506, 531, 564
Hsp92I	GRCGYC	1 cut(s)	564
Hsp92II	CATG	9 cut(s)	212, 223, 289, 299, 487, 662, 681, 1018, 1486
HspAI	GCGC	4 cut(s)	159, 183, 374, 432
Ksp22I	TGATCA	3 cut(s)	486, 811, 826
Kzo9I	GATC	9 cut(s)	282, 479, 486, 811, 826, 1239, 1249, 1371, 1383
LguI	GCTCTTC	2 cut(s)	398, 1131
LmnI	GCTCC	4 cut(s)	7, 228, 619, 1358
Lsp1109I	GCAGC	2 cut(s)	259, 1416
LweI	GCATC	2 cut(s)	531, 592
MaeI	CTAG	6 cut(s)	155, 584, 722, 798, 974, 1418
MaeII	ACGT	4 cut(s)	363, 506, 531, 564
MaeIII	GTNAC	1 cut(s)	507
MalI	GATC	9 cut(s)	284, 481, 488, 813, 828, 1241, 1251, 1373, 1385
MboI	GATC	9 cut(s)	282, 479, 486, 811, 826, 1239, 1249, 1371, 1383
MflI	RGATCY	4 cut(s)	479, 1249, 1371, 1383
MhlI	GDGCHC	2 cut(s)	12, 624
MluCI	AATT	9 cut(s)	611, 632, 672, 749, 870, 892, 1022, 1423, 1506
MlyI	GAGTC	1 cut(s)	1165
MmeI	TCCRAC	1 cut(s)	643
MseI	TTAA	8 cut(s)	615, 671, 1070, 1116, 1203, 1502, 1527, 1558
MslI	CAYNNNNRTG	1 cut(s)	413
MspA1I	CMGCKG	1 cut(s)	877
MspI	CCGG	4 cut(s)	277, 1289, 1380, 1455
MspR9I	CCNGG	6 cut(s)	277, 278, 1234, 1380, 1381, 1455
Mva1269I	GAATGC	2 cut(s)	305, 1234
MvaI	CCWGG	1 cut(s)	1234
MvnI	CGCG	1 cut(s)	183
MwoI	GCNNNNNNNGC	4 cut(s)	191, 272, 550, 772
NciI	CCSGG	5 cut(s)	277, 278, 1380, 1381, 1455
NcoI	CCATGG	1 cut(s)	677
NdeI	CATATG	1 cut(s)	410
NdeII	GATC	9 cut(s)	282, 479, 486, 811, 826, 1239, 1249, 1371, 1383
NlaIII	CATG	9 cut(s)	212, 223, 289, 299, 487, 662, 681, 1018, 1486
NlaIV	GGNNCC	2 cut(s)	1333, 1385
NmeAIII	GCCGAG	1 cut(s)	292
NmuCI	GTSAC	1 cut(s)	507
PaeR7I	CTCGAG	3 cut(s)	162, 201, 571
PagI	TCATGA	2 cut(s)	285, 1014
PaqCI	CACCTGC	1 cut(s)	388
PceI	AGGCCT	1 cut(s)	819
PciSI	GCTCTTC	2 cut(s)	398, 1131
PcsI	WCGNNNNNNNCGW	1 cut(s)	451
PctI	GAATGC	2 cut(s)	305, 1234
PfeI	GAWTC	4 cut(s)	421, 758, 1256, 1490
PflFI	GACNNNGTC	1 cut(s)	566
PflMI	CCANNNNNTGG	1 cut(s)	683
PkrI	GCNGC	3 cut(s)	274, 580, 1431
PleI	GAGTC	1 cut(s)	1165
PpsI	GAGTC	1 cut(s)	1165
PshAI	GACNNNNGTC	1 cut(s)	322
PsiI	TTATAA	1 cut(s)	1326
Psp124BI	GAGCTC	2 cut(s)	12, 624
Psp6I	CCWGG	1 cut(s)	1232
PspFI	CCCAGC	2 cut(s)	605, 947
PspGI	CCWGG	1 cut(s)	1232
PspN4I	GGNNCC	2 cut(s)	1333, 1385
PspPI	GGNCC	3 cut(s)	212, 447, 1332
PspXI	VCTCGAGB	1 cut(s)	162
PsuI	RGATCY	4 cut(s)	479, 1249, 1371, 1383
PsyI	GACNNNGTC	1 cut(s)	566
RsaI	GTAC	6 cut(s)	39, 68, 97, 207, 596, 743
RsaNI	GTAC	6 cut(s)	38, 67, 96, 206, 595, 742
RseI	CAYNNNNRTG	1 cut(s)	413
SacI	GAGCTC	2 cut(s)	12, 624
SalI	GTCGAC	1 cut(s)	1168
SapI	GCTCTTC	2 cut(s)	398, 1131
SaqAI	TTAA	8 cut(s)	615, 671, 1070, 1116, 1203, 1502, 1527, 1558
SatI	GCNGC	3 cut(s)	273, 579, 1430
Sau3AI	GATC	9 cut(s)	282, 479, 486, 811, 826, 1239, 1249, 1371, 1383
Sau96I	GGNCC	3 cut(s)	212, 447, 1332
ScaI	AGTACT	1 cut(s)	596
SchI	GAGTC	1 cut(s)	1165
ScrFI	CCNGG	6 cut(s)	277, 278, 1234, 1380, 1381, 1455
SduI	GDGCHC	2 cut(s)	12, 624
SfaNI	GCATC	2 cut(s)	531, 592
Sfr274I	CTCGAG	3 cut(s)	162, 201, 571
SinI	GGWCC	3 cut(s)	212, 447, 1332
SlaI	CTCGAG	3 cut(s)	162, 201, 571
SmaI	CCCGGG	2 cut(s)	278, 1381
SmiMI	CAYNNNNRTG	1 cut(s)	413
SmlI	CTYRAG	5 cut(s)	162, 201, 427, 571, 1173
SmoI	CTYRAG	5 cut(s)	162, 201, 427, 571, 1173
SpeI	ACTAGT	1 cut(s)	721
Sse9I	AATT	9 cut(s)	611, 632, 672, 749, 870, 892, 1022, 1423, 1506
SseBI	AGGCCT	1 cut(s)	819
SsiI	CCGC	5 cut(s)	5, 330, 578, 647, 877
SspI	AATATT	1 cut(s)	1068
SspMI	CTAG	6 cut(s)	155, 584, 722, 798, 974, 1418
SstI	GAGCTC	2 cut(s)	12, 624
StuI	AGGCCT	1 cut(s)	819
StyD4I	CCNGG	6 cut(s)	275, 276, 1232, 1378, 1379, 1453
StyI	CCWWGG	2 cut(s)	677, 1007
TaaI	ACNGT	4 cut(s)	383, 741, 1193, 1402
TaiI	ACGT	4 cut(s)	366, 509, 534, 567
TaqI	TCGA	5 cut(s)	163, 202, 336, 572, 1169
TaqII	GACCGA	2 cut(s)	435, 1349
TasI	AATT	9 cut(s)	611, 632, 672, 749, 870, 892, 1022, 1423, 1506
TatI	WGTACW	4 cut(s)	37, 66, 205, 594
TauI	GCSGC	1 cut(s)	581
TfiI	GAWTC	4 cut(s)	421, 758, 1256, 1490
Tru1I	TTAA	8 cut(s)	615, 671, 1070, 1116, 1203, 1502, 1527, 1558
Tru9I	TTAA	8 cut(s)	615, 671, 1070, 1116, 1203, 1502, 1527, 1558
TscAI	CASTG	1 cut(s)	1116
TseFI	GTSAC	1 cut(s)	507
TseI	GCWGC	2 cut(s)	272, 1429
Tsp45I	GTSAC	1 cut(s)	507
TspDTI	ATGAA	6 cut(s)	36, 302, 647, 762, 1499, 1539
TspGWI	ACGGA	1 cut(s)	653
TspMI	CCCGGG	2 cut(s)	276, 1379
TspRI	CASTG	1 cut(s)	1116
Tth111I	GACNNNGTC	1 cut(s)	566
Van91I	CCANNNNNTGG	1 cut(s)	683
VpaK11BI	GGWCC	3 cut(s)	212, 447, 1332
XapI	RAATTY	5 cut(s)	611, 632, 749, 870, 1423
XbaI	TCTAGA	1 cut(s)	973
XcmI	CCANNNNNNNNNTGG	1 cut(s)	684
XhoI	CTCGAG	3 cut(s)	162, 201, 571
XmaI	CCCGGG	2 cut(s)	276, 1379
XmiI	GTMKAC	1 cut(s)	1169
XspI	CTAG	6 cut(s)	155, 584, 722, 798, 974, 1418
ZraI	GACGTC	1 cut(s)	565
ZrmI	AGTACT	1 cut(s)	596

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.