AT2G41705

Camphor resistance CrcB family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0001325
Physical Location & Seq
Forward (+)
17397270 .. 17400081
2812 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G41705.2

Sequence Viewer

Length: 1386 bp
ATGGATACGGGTCAAAGCAGCATAGAACCTTATCAAGCCAAGTCTTTTAGTCGGGAGAGCAGTGTAGCCTCTTCTTTAAGCTTATCACGTAGTTTGCCTCACCTAATTGACAATGACGTCGATAGTGAGAGTGTCTCAGAGGCAGGGGATATTGGGGACCGCTCACTTCGGAGAAGGCATAGTGCTGGTAGAAGCAGCCGTTTGTCTGCTGATGATTTTATAGAACAAGGGACTCATGATACTTCTCGTCAAGAACAAGATATATTACATGACCTTCGAGCTTTCAACACTGCTTCCGTAAATAAAACTTTGCCTGAGGACATAACAGCATCTCCTTTACCGACCAAGTCACTCTTGTCACCTGAAATAAACAACTCCGGAAAGGAGGAAGAGCGAGTGTTACCAAAGTCCTTGGAGTACATATCATGCCTAATTCATTTGGCTGTTTTTGGGATTTTTGGGGCCATTACGAGATATTTGCTGCAAAAATTGTTTGGGCCAACTGGTGCTCGAGTAACAAGTGATGGGAGCATCTTGTACCTTGATCTTCCCTCCAACATGGTAGGATCATTCTTGATGGGTTGGTTTGGCGTTGTATTCAAAGCAGATATAGCAAGAGTTTCTGAATTTGTGGCGATAGGATTATCGACTGGTTATTTGGGGAGTCTGACAACATTCAGCGGTTGGAACCAGAAAATGCTGGATCTTAGTGCTGATGGTCAATGGGTGTATGCTGTGCTTGGCTTTTTATTAGGATTGTTTCTCACGTCATACTCCATAATTCTGGGAGTGGAAACGGCCAAAGGGTTTAAATGGCTTCTTCATAGAAGAGCTTCTTCTGAGGATAAATTCCATTGTCTTAAGGTTAACACCTTCCAGAGCCATATTGTGTCTCTGACCCTGATGCTTCTGTTGCTTGTGGCTTTACTCACTGCCAGTTCCATACTGCTTGTGAAAGAGTTTGACAAAGGAACAAGCGAGGCTCAGCTATGGTTTGGTTGCTTAGTTGCAGCCCCTGGTGTCTGGCTCAGATGGTTCTTAGCCCGACTCAATGGACGTGGGCTGGGAAAGGATAGTCAAAATTTGAGATGGGTCCCATTTGGCACCCTCATTGCAAATGTAGTTGCAGCTTGCGTTATGGCAGCATTGGCTACCTTGAAGAAATCGGTGAACACGAGAACATGTAACACGGTTGCTTCGAGCATACAGTTTGGTCTGTTGGGATGTCTGAGCACAGTTTCGACCTTCATGGCTGAGTTCAATGCGATGAGAGAAAGTGATTACCCATGGAGAGCCTATGCGTATGCATCTTTTACCATTGTGGTTTCTTTTGCGATTGGAACTATTATATACTCAGTCCCTGTCTGGGTAATAGGATTCAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CRCB

Protein Analysis

461

Amino Acids

50.47

Weight (kDa)

7.08

Isoelectric Point (pI)

49.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CRCB PF02537 147 - 264 6.2e-16 CrcB-like protein, Camphor Resistance (CrcB)
CRCB PF02537 334 - 446 2.1e-16 CrcB-like protein, Camphor Resistance (CrcB)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 116
AatII GACGTC 1 cut(s) 120
AccB1I GGYRCC 1 cut(s) 1103
AccBSI CCGCTC 1 cut(s) 162
AccIII TCCGGA 1 cut(s) 377
AciI CCGC 2 cut(s) 160, 681
AclWI GGATC 2 cut(s) 574, 711
AcoI YGGCCR 1 cut(s) 798
AcsI RAATTY 3 cut(s) 626, 848, 1081
AcyI GRCGYC 1 cut(s) 117
AfaI GTAC 2 cut(s) 419, 539
AfiI CCNNNNNNNGG 1 cut(s) 1366
AflII CTTAAG 1 cut(s) 860
AflIII ACRYGT 1 cut(s) 1181
AgsI TTSAA 4 cut(s) 286, 601, 1159, 1261
AjiI CACGTC 2 cut(s) 768, 1058
AjnI CCWGG 1 cut(s) 1015
AluBI AGCT 5 cut(s) 81, 281, 833, 988, 1130
AluI AGCT 5 cut(s) 81, 281, 833, 988, 1130
Alw21I GWGCWC 2 cut(s) 511, 1235
Alw26I GTCTC 2 cut(s) 139, 897
AlwI GGATC 2 cut(s) 574, 711
AlwNI CAGNNNCTG 2 cut(s) 1016, 1361
Ama87I CYCGRG 1 cut(s) 510
Aor13HI TCCGGA 1 cut(s) 377
AoxI GGCC 3 cut(s) 462, 497, 798
ApeKI GCWGC 6 cut(s) 18, 195, 481, 1010, 1127, 1142
ApoI RAATTY 3 cut(s) 626, 848, 1081
ArsI GACNNNNNNTTYG 2 cut(s) 640, 672
Asp700I GAANNNNTTC 1 cut(s) 832
AspS9I GGNCC 4 cut(s) 157, 462, 497, 1093
AsuHPI GGTGA 3 cut(s) 92, 351, 1180
AvaI CYCGRG 1 cut(s) 510
AvaII GGWCC 2 cut(s) 157, 1093
AxyI CCTNAGG 1 cut(s) 315
BanI GGYRCC 1 cut(s) 1103
BauI CACGAG 1 cut(s) 1174
Bbv12I GWGCWC 2 cut(s) 511, 1235
BbvI GCAGC 6 cut(s) 30, 207, 468, 1022, 1139, 1154
BccI CCATC 5 cut(s) 518, 571, 710, 1026, 1083
BceAI ACGGC 2 cut(s) 183, 813
BcgI CGANNNNNNTGC 2 cut(s) 460, 494
BciT130I CCWGG 1 cut(s) 1017
BcoDI GTCTC 2 cut(s) 139, 897
BfrI CTTAAG 1 cut(s) 860
BisI GCNGC 6 cut(s) 19, 196, 482, 1011, 1128, 1143
BlpI GCTNAGC 1 cut(s) 984
BlsI GCNGC 6 cut(s) 20, 197, 483, 1012, 1129, 1144
Bme1390I CCNGG 1 cut(s) 1017
Bme18I GGWCC 2 cut(s) 157, 1093
BmeT110I CYCGRG 1 cut(s) 510
BmgBI CACGTC 2 cut(s) 768, 1058
BmgT120I GGNCC 4 cut(s) 157, 462, 497, 1093
BmiI GGNNCC 6 cut(s) 158, 463, 689, 1094, 1095, 1105
BmrFI CCNGG 1 cut(s) 1017
BmsI GCATC 4 cut(s) 338, 540, 894, 1316
BplI GAGNNNNNCTC 2 cut(s) 119, 151
Bpu1102I GCTNAGC 1 cut(s) 984
BsaAI YACGTR 1 cut(s) 89
BsaHI GRCGYC 1 cut(s) 117
BsaJI CCNNGG 3 cut(s) 411, 1015, 1286
BsaWI WCCGGW 1 cut(s) 377
BsaXI ACNNNNNCTCC 2 cut(s) 316, 346
Bsc4I CCNNNNNNNGG 1 cut(s) 1366
Bse1I ACTGG 3 cut(s) 508, 655, 936
Bse21I CCTNAGG 1 cut(s) 315
Bse3DI GCAATG 1 cut(s) 1110
BseAI TCCGGA 1 cut(s) 377
BseBI CCWGG 1 cut(s) 1017
BseDI CCNNGG 3 cut(s) 411, 1015, 1286
BseGI GGATG 1 cut(s) 1229
BseLI CCNNNNNNNGG 1 cut(s) 1366
BseMI GCAATG 1 cut(s) 1110
BseMII CTCAG 8 cut(s) 150, 306, 831, 998, 1042, 1220, 1245, 1368
BseNI ACTGG 3 cut(s) 508, 655, 936
BseXI GCAGC 6 cut(s) 30, 207, 468, 1022, 1139, 1154
BseYI CCCAGC 1 cut(s) 1063
BshFI GGCC 3 cut(s) 464, 499, 800
BshNI GGYRCC 1 cut(s) 1103
BsiHKAI GWGCWC 2 cut(s) 511, 1235
BsiHKCI CYCGRG 1 cut(s) 510
BsiSI CCGG 1 cut(s) 378
BslFI GGGAC 4 cut(s) 170, 244, 1079, 1343
BslI CCNNNNNNNGG 1 cut(s) 1366
BsmAI GTCTC 2 cut(s) 139, 897
BsmFI GGGAC 4 cut(s) 170, 244, 1079, 1343
BsnI GGCC 3 cut(s) 464, 499, 800
BsoBI CYCGRG 1 cut(s) 510
Bsp1286I GDGCHC 2 cut(s) 511, 1235
Bsp13I TCCGGA 1 cut(s) 377
Bsp143I GATC 3 cut(s) 544, 566, 703
Bsp1720I GCTNAGC 1 cut(s) 984
Bsp19I CCATGG 1 cut(s) 1286
BspACI CCGC 2 cut(s) 160, 681
BspANI GGCC 3 cut(s) 464, 499, 800
BspCNI CTCAG 8 cut(s) 149, 307, 832, 997, 1041, 1221, 1246, 1367
BspEI TCCGGA 1 cut(s) 377
BspHI TCATGA 1 cut(s) 235
BspLI GGNNCC 6 cut(s) 158, 463, 689, 1094, 1095, 1105
BspPI GGATC 2 cut(s) 574, 711
BspQI GCTCTTC 2 cut(s) 384, 823
BspT107I GGYRCC 1 cut(s) 1103
BspTI CTTAAG 1 cut(s) 860
BsrBI CCGCTC 1 cut(s) 162
BsrDI GCAATG 1 cut(s) 1110
BsrI ACTGG 3 cut(s) 508, 655, 936
BssECI CCNNGG 3 cut(s) 411, 1015, 1286
BssMI GATC 3 cut(s) 544, 566, 703
BssNI GRCGYC 1 cut(s) 117
BssSI CACGAG 1 cut(s) 1174
BssT1I CCWWGG 2 cut(s) 411, 1286
Bst2BI CACGAG 1 cut(s) 1174
Bst2UI CCWGG 1 cut(s) 1017
Bst4CI ACNGT 3 cut(s) 1192, 1209, 1237
Bst6I CTCTTC 3 cut(s) 76, 384, 823
BstACI GRCGYC 1 cut(s) 117
BstAFI CTTAAG 1 cut(s) 860
BstBAI YACGTR 1 cut(s) 89
BstC8I GCNNGC 1 cut(s) 1132
BstDSI CCRYGG 1 cut(s) 1286
BstF5I GGATG 1 cut(s) 1229
BstKTI GATC 3 cut(s) 547, 569, 706
BstMAI GTCTC 2 cut(s) 139, 897
BstMBI GATC 3 cut(s) 544, 566, 703
BstMWI GCNNNNNNNGC 3 cut(s) 611, 913, 1148
BstNI CCWGG 1 cut(s) 1017
BstNSI RCATGY 1 cut(s) 1185
BstSCI CCNGG 1 cut(s) 1015
BstV1I GCAGC 6 cut(s) 30, 207, 468, 1022, 1139, 1154
BstX2I RGATCY 1 cut(s) 703
BstXI CCANNNNNNTGG 1 cut(s) 784
BstYI RGATCY 1 cut(s) 703
Bsu36I CCTNAGG 1 cut(s) 315
BsuRI GGCC 3 cut(s) 464, 499, 800
BtgI CCRYGG 1 cut(s) 1286
BtgZI GCGATG 1 cut(s) 1280
BtrI CACGTC 2 cut(s) 768, 1058
BtsCI GGATG 1 cut(s) 1229
BtsI GCAGTG 3 cut(s) 67, 288, 930
BtsIMutI CAGTG 3 cut(s) 67, 288, 930
Cac8I GCNNGC 1 cut(s) 1132
CaiI CAGNNNCTG 2 cut(s) 1016, 1361
CciI TCATGA 1 cut(s) 235
Cfr13I GGNCC 4 cut(s) 157, 462, 497, 1093
Csp6I GTAC 2 cut(s) 418, 538
CspCI CAANNNNNGTGG 2 cut(s) 1039, 1074
CviAII CATG 7 cut(s) 236, 269, 426, 559, 1182, 1249, 1287
CviQI GTAC 2 cut(s) 418, 538
DpnI GATC 3 cut(s) 546, 568, 705
DpnII GATC 3 cut(s) 544, 566, 703
DraI TTTAAA 1 cut(s) 811
DrdI GACNNNNNNGTC 1 cut(s) 116
DseDI GACNNNNNNGTC 1 cut(s) 116
EaeI YGGCCR 1 cut(s) 798
Eam1104I CTCTTC 3 cut(s) 76, 384, 823
EarI CTCTTC 3 cut(s) 76, 384, 823
Eco130I CCWWGG 2 cut(s) 411, 1286
Eco47I GGWCC 2 cut(s) 157, 1093
Eco81I CCTNAGG 1 cut(s) 315
Eco88I CYCGRG 1 cut(s) 510
EcoO109I RGGNCCY 1 cut(s) 1093
EcoRII CCWGG 1 cut(s) 1015
EcoT14I CCWWGG 2 cut(s) 411, 1286
EcoT22I ATGCAT 1 cut(s) 1309
ErhI CCWWGG 2 cut(s) 411, 1286
FaeI CATG 7 cut(s) 239, 272, 429, 562, 1185, 1252, 1290
FalI AAGNNNNNCTT 4 cut(s) 338, 370, 820, 852
FaqI GGGAC 4 cut(s) 170, 244, 1079, 1343
FatI CATG 7 cut(s) 235, 268, 425, 558, 1181, 1248, 1286
Fnu4HI GCNGC 6 cut(s) 19, 196, 482, 1011, 1128, 1143
FokI GGATG 1 cut(s) 1236
Fsp4HI GCNGC 6 cut(s) 19, 196, 482, 1011, 1128, 1143
GluI GCNGC 6 cut(s) 19, 196, 482, 1011, 1128, 1143
GsaI CCCAGC 1 cut(s) 1067
HaeIII GGCC 3 cut(s) 464, 499, 800
HapII CCGG 1 cut(s) 378
Hin1I GRCGYC 1 cut(s) 117
Hin1II CATG 7 cut(s) 239, 272, 429, 562, 1185, 1252, 1290
HincII GTYRAC 1 cut(s) 868
HindII GTYRAC 1 cut(s) 868
HindIII AAGCTT 1 cut(s) 79
HinfI GANTC 4 cut(s) 232, 664, 1047, 1377
HpaI GTTAAC 1 cut(s) 868
HpaII CCGG 1 cut(s) 378
HphI GGTGA 3 cut(s) 92, 351, 1180
Hpy166II GTNNAC 2 cut(s) 868, 1171
Hpy188I TCNGA 8 cut(s) 139, 171, 625, 669, 841, 897, 1031, 1230
Hpy188III TCNNGA 6 cut(s) 53, 236, 251, 378, 574, 877
Hpy8I GTNNAC 2 cut(s) 868, 1171
Hpy99I CGWCG 1 cut(s) 122
HpyAV CCTTC 4 cut(s) 168, 284, 883, 1255
HpyCH4III ACNGT 3 cut(s) 1192, 1209, 1237
HpyCH4IV ACGT 4 cut(s) 88, 117, 767, 1057
HpyCH4V TGCA 5 cut(s) 484, 1010, 1115, 1127, 1307
HpyF10VI GCNNNNNNNGC 3 cut(s) 611, 913, 1148
HpySE526I ACGT 4 cut(s) 88, 117, 767, 1057
Hsp92I GRCGYC 1 cut(s) 117
Hsp92II CATG 7 cut(s) 239, 272, 429, 562, 1185, 1252, 1290
KflI GGGWCCC 1 cut(s) 1093
Kpn2I TCCGGA 1 cut(s) 377
KspAI GTTAAC 1 cut(s) 868
Kzo9I GATC 3 cut(s) 544, 566, 703
LguI GCTCTTC 2 cut(s) 384, 823
LmnI GCTCC 1 cut(s) 528
Lsp1109I GCAGC 6 cut(s) 30, 207, 468, 1022, 1139, 1154
LweI GCATC 4 cut(s) 338, 540, 894, 1316
MaeII ACGT 4 cut(s) 88, 117, 767, 1057
MaeIII GTNAC 5 cut(s) 348, 357, 399, 514, 1184
MalI GATC 3 cut(s) 546, 568, 705
MbiI CCGCTC 1 cut(s) 162
MboI GATC 3 cut(s) 544, 566, 703
MboII GAAGA 7 cut(s) 63, 401, 539, 812, 828, 840, 1171
MflI RGATCY 1 cut(s) 703
MhlI GDGCHC 2 cut(s) 511, 1235
MluCI AATT 7 cut(s) 105, 432, 488, 626, 780, 848, 1081
MlyI GAGTC 3 cut(s) 226, 673, 1041
MmeI TCCRAC 2 cut(s) 579, 665
MnlI CCTC 9 cut(s) 79, 108, 133, 310, 379, 562, 835, 973, 1118
Mph1103I ATGCAT 1 cut(s) 1309
MroI TCCGGA 1 cut(s) 377
MroXI GAANNNNTTC 1 cut(s) 832
MseI TTAA 4 cut(s) 77, 810, 861, 867
MspA1I CMGCKG 1 cut(s) 681
MspCI CTTAAG 1 cut(s) 860
MspI CCGG 1 cut(s) 378
MspR9I CCNGG 1 cut(s) 1017
MvaI CCWGG 1 cut(s) 1017
MwoI GCNNNNNNNGC 3 cut(s) 611, 913, 1148
NcoI CCATGG 1 cut(s) 1286
NdeII GATC 3 cut(s) 544, 566, 703
NlaIII CATG 7 cut(s) 239, 272, 429, 562, 1185, 1252, 1290
NlaIV GGNNCC 6 cut(s) 158, 463, 689, 1094, 1095, 1105
NmuCI GTSAC 2 cut(s) 348, 357
NsiI ATGCAT 1 cut(s) 1309
NspI RCATGY 1 cut(s) 1185
PaeR7I CTCGAG 1 cut(s) 510
PagI TCATGA 1 cut(s) 235
PciI ACATGT 1 cut(s) 1181
PciSI GCTCTTC 2 cut(s) 384, 823
PcsI WCGNNNNNNNCGW 2 cut(s) 1172, 1196
PdmI GAANNNNTTC 1 cut(s) 832
PfeI GAWTC 1 cut(s) 1377
PflFI GACNNNGTC 1 cut(s) 346
PkrI GCNGC 6 cut(s) 20, 197, 483, 1012, 1129, 1144
PleI GAGTC 3 cut(s) 226, 672, 1041
PpsI GAGTC 3 cut(s) 226, 672, 1041
Ppu21I YACGTR 1 cut(s) 89
PpuMI RGGWCCY 1 cut(s) 1093
PscI ACATGT 1 cut(s) 1181
Psp5II RGGWCCY 1 cut(s) 1093
Psp6I CCWGG 1 cut(s) 1015
PspFI CCCAGC 1 cut(s) 1063
PspGI CCWGG 1 cut(s) 1015
PspN4I GGNNCC 6 cut(s) 158, 463, 689, 1094, 1095, 1105
PspPI GGNCC 4 cut(s) 157, 462, 497, 1093
PspPPI RGGWCCY 1 cut(s) 1093
PspXI VCTCGAGB 1 cut(s) 510
PstNI CAGNNNCTG 2 cut(s) 1016, 1361
PsuI RGATCY 1 cut(s) 703
PsyI GACNNNGTC 1 cut(s) 346
RsaI GTAC 2 cut(s) 419, 539
RsaNI GTAC 2 cut(s) 418, 538
SapI GCTCTTC 2 cut(s) 384, 823
SaqAI TTAA 4 cut(s) 77, 810, 861, 867
SatI GCNGC 6 cut(s) 19, 196, 482, 1011, 1128, 1143
Sau3AI GATC 3 cut(s) 544, 566, 703
Sau96I GGNCC 4 cut(s) 157, 462, 497, 1093
SchI GAGTC 3 cut(s) 226, 673, 1041
ScrFI CCNGG 1 cut(s) 1017
SduI GDGCHC 2 cut(s) 511, 1235
SfaNI GCATC 4 cut(s) 338, 540, 894, 1316
Sfr274I CTCGAG 1 cut(s) 510
SinI GGWCC 2 cut(s) 157, 1093
SlaI CTCGAG 1 cut(s) 510
SmlI CTYRAG 2 cut(s) 510, 860
SmoI CTYRAG 2 cut(s) 510, 860
Sse9I AATT 7 cut(s) 105, 432, 488, 626, 780, 848, 1081
SsiI CCGC 2 cut(s) 160, 681
StyD4I CCNGG 1 cut(s) 1015
StyI CCWWGG 2 cut(s) 411, 1286
TaaI ACNGT 3 cut(s) 1192, 1209, 1237
TaiI ACGT 4 cut(s) 91, 120, 770, 1060
TaqI TCGA 6 cut(s) 120, 277, 511, 647, 1199, 1241
TasI AATT 7 cut(s) 105, 432, 488, 626, 780, 848, 1081
TatI WGTACW 1 cut(s) 417
TfiI GAWTC 1 cut(s) 1377
Tru1I TTAA 4 cut(s) 77, 810, 861, 867
Tru9I TTAA 4 cut(s) 77, 810, 861, 867
TscAI CASTG 3 cut(s) 67, 295, 937
TseFI GTSAC 2 cut(s) 348, 357
TseI GCWGC 6 cut(s) 18, 195, 481, 1010, 1127, 1142
Tsp45I GTSAC 2 cut(s) 348, 357
TspDTI ATGAA 3 cut(s) 425, 812, 1237
TspGWI ACGGA 1 cut(s) 286
TspRI CASTG 3 cut(s) 67, 295, 937
Tth111I GACNNNGTC 1 cut(s) 346
Vha464I CTTAAG 1 cut(s) 860
VpaK11BI GGWCC 2 cut(s) 157, 1093
XapI RAATTY 3 cut(s) 626, 848, 1081
XceI RCATGY 1 cut(s) 1185
XhoI CTCGAG 1 cut(s) 510
XmnI GAANNNNTTC 1 cut(s) 832
ZraI GACGTC 1 cut(s) 118
Zsp2I ATGCAT 1 cut(s) 1309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.