Rmu_sc0002096.1_g000021

UPF0695 membrane protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002096.1
Physical Location & Seq
Reverse (-)
64809 .. 69368
4560 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002096.1_g000021.1.cds

Sequence Viewer

Length: 1500 bp
atgaatccattgccgccatcctcagatagaagcttgcaaacccttttgaatcagtcaccacgagagaaacaaagacctgtgattatggagggagcagggtaccgaggtactgaccctgaacccggaattagtgtacccagcagtgccaattcttcttcaaaaatgtgttcttcaagcgtatcaggtgctcagccttctggaatagatgatgaccctgatgagtgtgtgtctgaggtgggagatattggggatcgagctctgcacagcaacaggaacagtttcagtgagagccttaacaacttgtctggagaggatgttttattgccatcctatgggttttggtgtcgtgatcgtactgcatcccgtgctatccccactgtgcctttgccagaggaaatcatatctctttccattgatgtggcatcacgcaatgaagataaaaagcaagtgagctttcggttggaaaatacaaataagttgctgccaaagtggatggagtatggttcatgtatgacacatttagccgtttttggtattcttggggtcttgacgaggtatctactgcaaaaattgtttggcccaggaggtgctggtgtgacaagtgaccaaacaattctttaccttgatcttccttctaatatggttggttctttcttgatgggatggtggggtgttgttttcaaagcagatatatcctatgtgtcagattttttggccattggattgtcaactggttatctgggaagccttactactttcagtggttggaaccagaaaatgcttgaactcagtgttcaaggccattggccttttgctgtgcttggcaatttaataggtttatttcttgcggcatactctattatttttgggatagagacatcgaagggtttcaggcagcttcttaaaaggtgttcagggtctgacattgccatctctagaaagacctggagggttgacagctacaagcgccacttggcagtttgggcagtgttgctggtgatgctaggttgtctatggagtgtaagtggaatcttggtgaaggaggactttagaaatgacagcagtgagacacatctatggttggcctgcatcattggacctgtaggtgtgtggatcaggtggttcttagctcgactcaatggacgtggattaggaaagacagggttgttaaaatggcttccatttggtactctaattgcaaatgtttctgcagcttgtatcatggcagcccttgctactgtggagaaagaggtgaataccaagacttgcaatatcattgtaaccggagttcaatttggttttttgggttgcctgagtactgtttctaccttcatttctgaattcaatgcaatgagagaaagtaaacacccgtggagagcatatgcatacttcatggttacgagcatccttgtgcttctccagtttgccatggaacttgaagaagattttttcacccgatcaccaacagccaatgctggtttaacagcggccaagttttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

499

Amino Acids

54.76

Weight (kDa)

6.99

Isoelectric Point (pI)

42.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 99
AccB1I GGYRCC 1 cut(s) 99
AccB7I CCANNNNNTGG 1 cut(s) 332
AciI CCGC 3 cut(s) 14, 848, 1487
AclWI GGATC 2 cut(s) 258, 1121
AcoI YGGCCR 2 cut(s) 714, 1488
AcsI RAATTY 1 cut(s) 1340
AfaI GTAC 6 cut(s) 101, 109, 135, 355, 1189, 1318
AfiI CCNNNNNNNGG 2 cut(s) 122, 332
AgsI TTSAA 9 cut(s) 49, 159, 174, 682, 785, 797, 1292, 1345, 1439
AjiI CACGTC 1 cut(s) 1145
AjnI CCWGG 2 cut(s) 580, 944
AluBI AGCT 7 cut(s) 33, 257, 453, 898, 960, 1130, 1214
AluI AGCT 7 cut(s) 33, 257, 453, 898, 960, 1130, 1214
Alw21I GWGCWC 2 cut(s) 190, 259
Alw26I GTCTC 2 cut(s) 869, 1061
AlwI GGATC 2 cut(s) 258, 1121
AlwNI CAGNNNCTG 1 cut(s) 920
AoxI GGCC 6 cut(s) 577, 714, 799, 806, 1083, 1488
ApeKI GCWGC 4 cut(s) 481, 895, 1211, 1226
ApoI RAATTY 1 cut(s) 1340
Asp700I GAANNNNTTC 2 cut(s) 278, 887
Asp718I GGTACC 1 cut(s) 99
AspLEI GCGC 1 cut(s) 969
AspS9I GGNCC 2 cut(s) 578, 1097
AsuC2I CCSGG 1 cut(s) 123
AsuHPI GGTGA 6 cut(s) 48, 1009, 1048, 1264, 1444, 1452
AvaII GGWCC 1 cut(s) 1097
BaeI ACNNNNGTAYC 2 cut(s) 91, 124
BalI TGGCCA 1 cut(s) 716
BanI GGYRCC 1 cut(s) 99
BanII GRGCYC 1 cut(s) 259
BarI GAAGNNNNNNTAC 2 cut(s) 736, 768
BauI CACGAG 1 cut(s) 60
Bbv12I GWGCWC 2 cut(s) 190, 259
BbvI GCAGC 4 cut(s) 468, 907, 1223, 1238
BccI CCATC 6 cut(s) 25, 334, 487, 652, 657, 938
BceAI ACGGC 1 cut(s) 509
BciT130I CCWGG 2 cut(s) 582, 946
BcnI CCSGG 1 cut(s) 123
BcoDI GTCTC 2 cut(s) 869, 1061
BfaI CTAG 2 cut(s) 936, 1004
BfmI CTRYAG 2 cut(s) 1101, 1209
BfoI RGCGCY 1 cut(s) 970
BisI GCNGC 7 cut(s) 14, 482, 849, 896, 1212, 1227, 1488
BlpI GCTNAGC 1 cut(s) 189
BlsI GCNGC 7 cut(s) 15, 483, 850, 897, 1213, 1228, 1489
BmcAI AGTACT 1 cut(s) 1318
Bme1390I CCNGG 3 cut(s) 123, 582, 946
Bme18I GGWCC 1 cut(s) 1097
BmgBI CACGTC 1 cut(s) 1145
BmgT120I GGNCC 2 cut(s) 578, 1097
BmiI GGNNCC 2 cut(s) 101, 770
BmrFI CCNGG 3 cut(s) 123, 582, 946
BmsI GCATC 5 cut(s) 368, 431, 990, 1098, 1413
BpmI CTGGAG 3 cut(s) 327, 967, 1403
Bpu1102I GCTNAGC 1 cut(s) 189
BpuMI CCSGG 1 cut(s) 123
BsaJI CCNNGG 4 cut(s) 103, 580, 1370, 1428
BsaWI WCCGGW 1 cut(s) 1283
BsaXI ACNNNNNCTCC 4 cut(s) 300, 330, 1009, 1039
Bsc4I CCNNNNNNNGG 2 cut(s) 122, 332
Bse1I ACTGG 2 cut(s) 736, 1420
Bse3DI GCAATG 4 cut(s) 8, 436, 924, 1356
BseBI CCWGG 2 cut(s) 582, 946
BseDI CCNNGG 4 cut(s) 103, 580, 1370, 1428
BseGI GGATG 7 cut(s) 17, 319, 326, 359, 498, 668, 1404
BseLI CCNNNNNNNGG 2 cut(s) 122, 332
BseMI GCAATG 4 cut(s) 8, 436, 924, 1356
BseMII CTCAG 5 cut(s) 36, 203, 222, 802, 1304
BseNI ACTGG 2 cut(s) 736, 1420
BseXI GCAGC 4 cut(s) 468, 907, 1223, 1238
BseYI CCCAGC 1 cut(s) 137
BsgI GTGCAG 1 cut(s) 245
BshFI GGCC 6 cut(s) 579, 716, 801, 808, 1085, 1490
BshNI GGYRCC 1 cut(s) 99
BsiHKAI GWGCWC 2 cut(s) 190, 259
BsiSI CCGG 2 cut(s) 123, 1284
BslI CCNNNNNNNGG 2 cut(s) 122, 332
BsmAI GTCTC 2 cut(s) 869, 1061
BsnI GGCC 6 cut(s) 579, 716, 801, 808, 1085, 1490
Bsp1286I GDGCHC 2 cut(s) 190, 259
Bsp143I GATC 5 cut(s) 250, 349, 625, 1113, 1457
Bsp1720I GCTNAGC 1 cut(s) 189
Bsp19I CCATGG 1 cut(s) 1428
BspACI CCGC 3 cut(s) 14, 848, 1487
BspANI GGCC 6 cut(s) 579, 716, 801, 808, 1085, 1490
BspCNI CTCAG 5 cut(s) 35, 202, 223, 801, 1305
BspLI GGNNCC 2 cut(s) 101, 770
BspMAI CTGCAG 1 cut(s) 1213
BspPI GGATC 2 cut(s) 258, 1121
BspT107I GGYRCC 1 cut(s) 99
BsrDI GCAATG 4 cut(s) 8, 436, 924, 1356
BsrI ACTGG 2 cut(s) 736, 1420
BssECI CCNNGG 4 cut(s) 103, 580, 1370, 1428
BssMI GATC 5 cut(s) 250, 349, 625, 1113, 1457
BssSI CACGAG 1 cut(s) 60
BssT1I CCWWGG 1 cut(s) 1428
Bst2BI CACGAG 1 cut(s) 60
Bst2UI CCWGG 2 cut(s) 582, 946
Bst4CI ACNGT 4 cut(s) 278, 379, 1240, 1321
BstAPI GCANNNNNTGC 2 cut(s) 365, 1232
BstC8I GCNNGC 2 cut(s) 35, 1087
BstDEI CTNAG 6 cut(s) 22, 189, 231, 788, 1126, 1313
BstDSI CCRYGG 2 cut(s) 1370, 1428
BstF5I GGATG 7 cut(s) 17, 319, 326, 359, 498, 668, 1404
BstH2I RGCGCY 1 cut(s) 970
BstHHI GCGC 1 cut(s) 969
BstKTI GATC 5 cut(s) 253, 352, 628, 1116, 1460
BstMAI GTCTC 2 cut(s) 869, 1061
BstMBI GATC 5 cut(s) 250, 349, 625, 1113, 1457
BstMWI GCNNNNNNNGC 5 cut(s) 365, 966, 983, 1000, 1232
BstNI CCWGG 2 cut(s) 582, 946
BstSCI CCNGG 3 cut(s) 121, 580, 944
BstSFI CTRYAG 2 cut(s) 1101, 1209
BstV1I GCAGC 4 cut(s) 468, 907, 1223, 1238
BstXI CCANNNNNNTGG 1 cut(s) 418
BsuRI GGCC 6 cut(s) 579, 716, 801, 808, 1085, 1490
BtgI CCRYGG 2 cut(s) 1370, 1428
BtrI CACGTC 1 cut(s) 1145
BtsCI GGATG 7 cut(s) 17, 319, 326, 359, 498, 668, 1404
BtsI GCAGTG 3 cut(s) 148, 993, 1069
BtsIMutI CAGTG 7 cut(s) 148, 289, 375, 766, 796, 993, 1069
Cac8I GCNNGC 2 cut(s) 35, 1087
CaiI CAGNNNCTG 1 cut(s) 920
CfoI GCGC 1 cut(s) 969
Cfr13I GGNCC 2 cut(s) 578, 1097
Csp6I GTAC 6 cut(s) 100, 108, 134, 354, 1188, 1317
CspCI CAANNNNNGTGG 2 cut(s) 1126, 1161
CviAII CATG 4 cut(s) 507, 1222, 1393, 1429
CviQI GTAC 6 cut(s) 100, 108, 134, 354, 1188, 1317
DdeI CTNAG 6 cut(s) 22, 189, 231, 788, 1126, 1313
DpnI GATC 5 cut(s) 252, 351, 627, 1115, 1459
DpnII GATC 5 cut(s) 250, 349, 625, 1113, 1457
EaeI YGGCCR 2 cut(s) 714, 1488
Ecl136II GAGCTC 1 cut(s) 257
Eco130I CCWWGG 1 cut(s) 1428
Eco24I GRGCYC 1 cut(s) 259
Eco47I GGWCC 1 cut(s) 1097
Eco53kI GAGCTC 1 cut(s) 257
EcoICRI GAGCTC 1 cut(s) 257
EcoRI GAATTC 1 cut(s) 1340
EcoRII CCWGG 2 cut(s) 580, 944
EcoT14I CCWWGG 1 cut(s) 1428
EcoT22I ATGCAT 1 cut(s) 1387
EcoT38I GRGCYC 1 cut(s) 259
ErhI CCWWGG 1 cut(s) 1428
FaeI CATG 4 cut(s) 510, 1225, 1396, 1432
FalI AAGNNNNNCTT 4 cut(s) 956, 988, 1031, 1063
FatI CATG 4 cut(s) 506, 1221, 1392, 1428
FauNDI CATATG 1 cut(s) 1381
Fnu4HI GCNGC 7 cut(s) 14, 482, 849, 896, 1212, 1227, 1488
FokI GGATG 7 cut(s) 4, 313, 326, 346, 505, 675, 1391
FriOI GRGCYC 1 cut(s) 259
Fsp4HI GCNGC 7 cut(s) 14, 482, 849, 896, 1212, 1227, 1488
FspBI CTAG 2 cut(s) 936, 1004
GlaI GCGC 1 cut(s) 968
GluI GCNGC 7 cut(s) 14, 482, 849, 896, 1212, 1227, 1488
GsaI CCCAGC 1 cut(s) 141
GsuI CTGGAG 3 cut(s) 327, 967, 1403
HaeII RGCGCY 1 cut(s) 970
HaeIII GGCC 6 cut(s) 579, 716, 801, 808, 1085, 1490
HapII CCGG 2 cut(s) 123, 1284
HhaI GCGC 1 cut(s) 969
Hin1II CATG 4 cut(s) 510, 1225, 1396, 1432
Hin6I GCGC 1 cut(s) 967
HinP1I GCGC 1 cut(s) 967
HincII GTYRAC 2 cut(s) 729, 955
HindII GTYRAC 2 cut(s) 729, 955
HindIII AAGCTT 1 cut(s) 31
HinfI GANTC 4 cut(s) 4, 49, 1029, 1134
HpaII CCGG 2 cut(s) 123, 1284
HphI GGTGA 6 cut(s) 48, 1009, 1048, 1264, 1444, 1452
Hpy166II GTNNAC 4 cut(s) 134, 729, 955, 1364
Hpy188I TCNGA 5 cut(s) 25, 232, 706, 922, 1339
Hpy188III TCNNGA 6 cut(s) 198, 306, 347, 547, 655, 936
Hpy8I GTNNAC 4 cut(s) 134, 729, 955, 1364
HpyAV CCTTC 5 cut(s) 204, 642, 877, 1033, 1339
HpyCH4III ACNGT 4 cut(s) 278, 379, 1240, 1321
HpyCH4IV ACGT 1 cut(s) 1144
HpyF10VI GCNNNNNNNGC 5 cut(s) 365, 966, 983, 1000, 1232
HpyF3I CTNAG 6 cut(s) 22, 189, 231, 788, 1126, 1313
HpySE526I ACGT 1 cut(s) 1144
Hsp92II CATG 4 cut(s) 510, 1225, 1396, 1432
HspAI GCGC 1 cut(s) 967
KpnI GGTACC 1 cut(s) 103
Kzo9I GATC 5 cut(s) 250, 349, 625, 1113, 1457
LmnI GCTCC 1 cut(s) 92
Lsp1109I GCAGC 4 cut(s) 468, 907, 1223, 1238
LweI GCATC 5 cut(s) 368, 431, 990, 1098, 1413
MaeI CTAG 2 cut(s) 936, 1004
MaeII ACGT 1 cut(s) 1144
MaeIII GTNAC 5 cut(s) 54, 595, 602, 1279, 1396
MalI GATC 5 cut(s) 252, 351, 627, 1115, 1459
MboI GATC 5 cut(s) 250, 349, 625, 1113, 1457
MboII GAAGA 7 cut(s) 144, 147, 162, 446, 620, 1451, 1454
MhlI GDGCHC 2 cut(s) 190, 259
MlsI TGGCCA 1 cut(s) 716
MluCI AATT 8 cut(s) 126, 148, 569, 612, 826, 1194, 1292, 1340
MluNI TGGCCA 1 cut(s) 716
MlyI GAGTC 1 cut(s) 1128
MmeI TCCRAC 2 cut(s) 441, 746
Mox20I TGGCCA 1 cut(s) 716
Mph1103I ATGCAT 1 cut(s) 1387
MroXI GAANNNNTTC 2 cut(s) 278, 887
MscI TGGCCA 1 cut(s) 716
MseI TTAA 5 cut(s) 294, 830, 903, 1169, 1481
MslI CAYNNNNRTG 3 cut(s) 416, 1075, 1409
Msp20I TGGCCA 1 cut(s) 716
MspA1I CMGCKG 1 cut(s) 1487
MspI CCGG 2 cut(s) 123, 1284
MspR9I CCNGG 3 cut(s) 123, 582, 946
MvaI CCWGG 2 cut(s) 582, 946
MwoI GCNNNNNNNGC 5 cut(s) 365, 966, 983, 1000, 1232
NciI CCSGG 1 cut(s) 123
NcoI CCATGG 1 cut(s) 1428
NdeI CATATG 1 cut(s) 1381
NdeII GATC 5 cut(s) 250, 349, 625, 1113, 1457
NlaIII CATG 4 cut(s) 510, 1225, 1396, 1432
NlaIV GGNNCC 2 cut(s) 101, 770
NmuCI GTSAC 3 cut(s) 54, 595, 602
NsiI ATGCAT 1 cut(s) 1387
PdmI GAANNNNTTC 2 cut(s) 278, 887
PfeI GAWTC 3 cut(s) 4, 49, 1029
PflMI CCANNNNNTGG 1 cut(s) 332
PkrI GCNGC 7 cut(s) 15, 483, 850, 897, 1213, 1228, 1489
PleI GAGTC 1 cut(s) 1128
PpsI GAGTC 1 cut(s) 1128
Psp124BI GAGCTC 1 cut(s) 259
Psp6I CCWGG 2 cut(s) 580, 944
PspFI CCCAGC 1 cut(s) 137
PspGI CCWGG 2 cut(s) 580, 944
PspN4I GGNNCC 2 cut(s) 101, 770
PspPI GGNCC 2 cut(s) 578, 1097
PsrI GAACNNNNNNTAC 2 cut(s) 1272, 1304
PstI CTGCAG 1 cut(s) 1213
PstNI CAGNNNCTG 1 cut(s) 920
RsaI GTAC 6 cut(s) 101, 109, 135, 355, 1189, 1318
RsaNI GTAC 6 cut(s) 100, 108, 134, 354, 1188, 1317
RseI CAYNNNNRTG 3 cut(s) 416, 1075, 1409
SacI GAGCTC 1 cut(s) 259
SaqAI TTAA 5 cut(s) 294, 830, 903, 1169, 1481
SatI GCNGC 7 cut(s) 14, 482, 849, 896, 1212, 1227, 1488
Sau3AI GATC 5 cut(s) 250, 349, 625, 1113, 1457
Sau96I GGNCC 2 cut(s) 578, 1097
ScaI AGTACT 1 cut(s) 1318
SchI GAGTC 1 cut(s) 1128
ScrFI CCNGG 3 cut(s) 123, 582, 946
SduI GDGCHC 2 cut(s) 190, 259
SfaNI GCATC 5 cut(s) 368, 431, 990, 1098, 1413
SfcI CTRYAG 2 cut(s) 1101, 1209
SinI GGWCC 1 cut(s) 1097
SmiMI CAYNNNNRTG 3 cut(s) 416, 1075, 1409
Sse9I AATT 8 cut(s) 126, 148, 569, 612, 826, 1194, 1292, 1340
SsiI CCGC 3 cut(s) 14, 848, 1487
SspMI CTAG 2 cut(s) 936, 1004
SstI GAGCTC 1 cut(s) 259
StyD4I CCNGG 3 cut(s) 121, 580, 944
StyI CCWWGG 1 cut(s) 1428
TaaI ACNGT 4 cut(s) 278, 379, 1240, 1321
TaiI ACGT 1 cut(s) 1147
TaqI TCGA 3 cut(s) 253, 881, 1132
TasI AATT 8 cut(s) 126, 148, 569, 612, 826, 1194, 1292, 1340
TatI WGTACW 1 cut(s) 1316
TauI GCSGC 3 cut(s) 16, 851, 1490
TfiI GAWTC 3 cut(s) 4, 49, 1029
Tru1I TTAA 5 cut(s) 294, 830, 903, 1169, 1481
Tru9I TTAA 5 cut(s) 294, 830, 903, 1169, 1481
TscAI CASTG 7 cut(s) 148, 289, 382, 766, 796, 993, 1069
TseFI GTSAC 3 cut(s) 54, 595, 602
TseI GCWGC 4 cut(s) 481, 895, 1211, 1226
Tsp45I GTSAC 3 cut(s) 54, 595, 602
TspDTI ATGAA 5 cut(s) 17, 447, 495, 1321, 1381
TspRI CASTG 7 cut(s) 148, 289, 382, 766, 796, 993, 1069
Van91I CCANNNNNTGG 1 cut(s) 332
VpaK11BI GGWCC 1 cut(s) 1097
XapI RAATTY 1 cut(s) 1340
XbaI TCTAGA 1 cut(s) 935
XmnI GAANNNNTTC 2 cut(s) 278, 887
XspI CTAG 2 cut(s) 936, 1004
ZrmI AGTACT 1 cut(s) 1318
Zsp2I ATGCAT 1 cut(s) 1387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.