Rorug06G0249200

UPF0695 membrane protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0001325
Physical Location & Seq
Forward (+)
39547449 .. 39551905
4457 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0249200.1

Sequence Viewer

Length: 2733 bp
ATGTTTGCAGTAAGCACCATTAATGGAGGAGTCTCAAAGATTGCCATTAAGGCTGCCGAGGAGGATGTGAATGCCGATCCAAGCATTCTTAGTGGAACTAAATTTTCTGTATCTATTCATGATTCGAACTACAGTGGATTTCTCAGCATCATCGGAGCACTAAATTACATGGAGTCCGATACCGTGGCTATAATTGGTCCTCAAACTTCTGTAATGGCTCATATAATCTCACATCTTGCAAATGAACTACACGTGCCGTTACTGTCATTCACTGCACTAGATCCCACCCTATCAAGCCTGCAGTACCCTTACTTTCTTCAAACTGCACCAAATGATCAATTCCAGATGAATGCTGTTGGAGACATGGTTAGTTATTTCGGTTGGAAGGAGGTGGTTGCACTTTTCACTGATGATGATCAGAGCCGAAATGGTGTTACTGCATTAGGTGATAAGCTTGCAGAAAAAATGCACAAGATTTCTTACAAGGCAGTACTTCCACCTGATCCAACAGCAACTCGAGACCAAGTTAAGACTGAGCTGGTAAAGATTCAGATAATGGAGTCTCGAGTAATTGTTCTACACACATTCTCGAAAACCGGCCTCTTGGTTTTTGATGTTGCAAAGGAACTTGGGATGATGGAGAGTGGATATGTTTGGATAGCTACTGCTTGGTTGTCCACAGTTTTGGATTCAACTTCCCCACTTCCTCAGAAGACTAAAGACTCCATCGAAGGAGCTCTCACTCTTCGTCCGCACACACCGGATTCAAAAGGGAAAAGAGCTTTCATTTCAAGGTGGAAGAAGTTGAGTAATGGCACTAGAGGGTTGAACCCTTATGCTCTATATGCCTATGACACTGTTTGGATTATTGCTCATGCTGTCAATTTGCTTTTGGATCAGGGAGGTACCATTTCTTTTTCCAATCATGCTAGTATACCTCGTTATGGGGGAGGGATTATGAACCTTTCTGCATTAAGCATTTTTAATGGTGGCAAGCAGTTGCTGGAAAACATATTGCAAACCAACACGACCGGTCTCACTGGTCCACTGGCTTTTCATTCAGACAGGTCTCTAGTGAATCCTTCCTATGATATCATTAACATAATTGAAAATGGATATCAACAGATTGGATACTGGTCTAACAGTTCAGGGCTATCTGTTGTGCCCCCTGAGACAGCACCCAACTGGTCTAGTTCAAACCAACATTTAGATGCTGTTGTATGGCCTGGAGGGAAAACAGATAAGCCCCGAGGGTGGGTTTTTCCAAACAATGGGAAGCAGTTAATAATTGGAGTACCAGATAGAGTAAGCTATCGCGACTTTGTGTCACGACAAAATGGTACAGATATAGCTAAAGGATACTGCATTGACATTTTCCGTGCAGCCATAAAGTTGCTTCCCTATGCAGTTCCACATAGGTTTGAGCTGTTTGGTGATGGCCACAAGAACCCAAGCTACTACGATCTTGTTAGCAATATCGCTTCAGGTAAGTTTGATGCTGCTGTTGGTGACATTGCAATAGTTGCAAACAGAACAAAGATTGTGGATTTCACTCAGCCATATATAGAGTCAGGGCTAGTAGTGGTGGCACCAGTTAGGGGTTCAGATGCAAGAGCTTGGGCATTCTTGAAGCCGTTTTCTCCATTGATGTGGGGTGTCACAGCAGCTTTCTTCCTAATTGTTGGATCAGTCCTGTGGGTTCTTGAACATAGATTAAATGATGATTTCCGGGGCCCTCCTAGGAAACAGATTGGCACAATTTTATGGTTTAGCTTCTCTACCATGTTTTTTGCTCATAGAGAAAATACTGTGAGCTTACTAGGGCGAATGGTGCTAATCATCTGGCTTTTTATAATTCTGATAATCAACTCGAGCTACACAGCTAGCCTGACATCAATGCTCACAGTACAACAATTATCTTCACCCATCACTGGAATCGATACCTTGATATCTAGCTTCGAGCCTATAGGATTCCAAGTAGGGTCTTTTGCTGAAAACTATTTGATCGAGGAACTCAACATCCCAAAATCTAGACTGGTTCCTCTTGGTTCACCAGAAGAATATGCAAATGCCCTCAAGGAAAGAACTGTTGCTGCTGTGGTTGATGAAAGGCCTTATATAGAACTCTTCCTATCAGATAACTGCATGTTCTCAATCAGAGGGCCAGAATTCACCAAAAGTGGCTGGGGATTTGCATTTCCAAGAGACTCTCCTTTAGCCATAGATATGTCAACTGCCATTCTCACTCTATCAGAGAACGGTGAGCTTCAGCAAATTCATGACAAATGGCTATCAAGGAAGGCTTGTGCTTCACAAACCTCTGACGTCGAATCCGACCAGCTTCAACTACAAAGCTTCTGGGGAGTATTCCTAATAGTTGGCACTGCATGTTTCATTGCTCTAGTCATTCACTTTTCGTTGGCTTTTAGACAGTACCTCCGGCGTTCCCCTGAAGATGATCATCATTCTGATCTAGAGCCGTCTGGCCATGGCAGCACAAGTTCTGGTTCTACTGCAACACCCCGCCTCACGTTCTTGTCATTCATTGACGAAAAGAAAGATCAATCAAAAGATAACAAGTCAAAAAGAAAACGTGAGGAAATCATGGGAAAGTCATCTAATTGGCATGAAAAGGAAGATGTATCAAGGAATGTTAGTACATCCAAGAGAGTACAAGTGAACAAGTCTGAGATATCGCATATTTCTGATAATGATACTTGGTTAACTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CRCB

Protein Analysis

910

Amino Acids

100.75

Weight (kDa)

6.21

Isoelectric Point (pI)

42.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 8 - 295 8.2e-16 Periplasmic binding protein
ANF_receptor PF01094 13 - 369 4.6e-88 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 445 - 530 7.2e-09 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 486 - 765 1.5e-10 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 550 - 797 3.5e-37 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1853
AatII GACGTC 1 cut(s) 2328
Acc65I GGTACC 1 cut(s) 905
AccB1I GGYRCC 2 cut(s) 905, 1588
AccB7I CCANNNNNTGG 1 cut(s) 1271
AccI GTMKAC 1 cut(s) 934
AccII CGCG 1 cut(s) 1317
AciI CCGC 2 cut(s) 752, 2524
AclWI GGATC 5 cut(s) 71, 275, 497, 903, 1693
AcoI YGGCCR 2 cut(s) 1438, 2485
AcsI RAATTY 3 cut(s) 101, 2168, 2274
AcuI CTGAAG 3 cut(s) 1467, 2252, 2472
AcvI CACGTG 1 cut(s) 253
AcyI GRCGYC 1 cut(s) 2325
AfaI GTAC 9 cut(s) 305, 492, 907, 1296, 1342, 1908, 2435, 2659, 2673
AfiI CCNNNNNNNGG 6 cut(s) 944, 1254, 1255, 1271, 1598, 1931
AflIII ACRYGT 1 cut(s) 250
AgeI ACCGGT 1 cut(s) 1031
AhdI GACNNNNNGTC 1 cut(s) 1324
AjnI CCWGG 1 cut(s) 1225
AloI GAACNNNNNNTCC 2 cut(s) 2004, 2036
Alw21I GWGCWC 2 cut(s) 160, 739
Alw26I GTCTC 8 cut(s) 37, 354, 513, 567, 1040, 1074, 1166, 2199
AlwI GGATC 5 cut(s) 71, 275, 497, 903, 1693
AlwNI CAGNNNCTG 1 cut(s) 1003
Ama87I CYCGRG 4 cut(s) 516, 564, 1248, 1870
AoxI GGCC 7 cut(s) 598, 1223, 1438, 1732, 2111, 2162, 2485
ApaI GGGCCC 1 cut(s) 1736
ApeKI GCWGC 6 cut(s) 53, 1382, 1499, 1664, 2093, 2493
ApoI RAATTY 3 cut(s) 101, 2168, 2274
AseI ATTAAT 1 cut(s) 21
AsiGI ACCGGT 1 cut(s) 1031
Asp718I GGTACC 1 cut(s) 905
AspA2I CCTAGG 1 cut(s) 1739
AspS9I GGNCC 5 cut(s) 197, 1043, 1732, 1733, 2162
AsuC2I CCSGG 1 cut(s) 1730
AsuHPI GGTGA 7 cut(s) 458, 1445, 1520, 1914, 2043, 2164, 2273
AsuII TTCGAA 1 cut(s) 125
AsuNHI GCTAGC 1 cut(s) 1883
AvaI CYCGRG 4 cut(s) 516, 564, 1248, 1870
AvaII GGWCC 2 cut(s) 197, 1043
AvrII CCTAGG 1 cut(s) 1739
BaeGI GKGCMC 2 cut(s) 1167, 1736
BalI TGGCCA 2 cut(s) 1440, 2487
BanI GGYRCC 2 cut(s) 905, 1588
BanII GRGCYC 2 cut(s) 739, 1736
BbrPI CACGTG 1 cut(s) 253
BbsI GAAGAC 1 cut(s) 719
Bbv12I GWGCWC 2 cut(s) 160, 739
BbvI GCAGC 6 cut(s) 40, 1394, 1486, 1676, 2080, 2505
BccI CCATC 4 cut(s) 631, 734, 1430, 1934
BceAI ACGGC 3 cut(s) 241, 1618, 2464
BciT130I CCWGG 1 cut(s) 1227
BciVI GTATCC 2 cut(s) 1124, 1352
BclI TGATCA 3 cut(s) 334, 415, 2458
BcnI CCSGG 1 cut(s) 1730
BcoDI GTCTC 8 cut(s) 37, 354, 513, 567, 1040, 1074, 1166, 2199
BfmI CTRYAG 3 cut(s) 130, 299, 1965
BfuI GTATCC 2 cut(s) 1124, 1352
BglI GCCNNNNNGGC 1 cut(s) 50
BisI GCNGC 6 cut(s) 54, 1383, 1500, 1665, 2094, 2494
BlnI CCTAGG 1 cut(s) 1739
BlsI GCNGC 6 cut(s) 55, 1384, 1501, 1666, 2095, 2495
BmcAI AGTACT 1 cut(s) 492
Bme1390I CCNGG 2 cut(s) 1227, 1730
Bme18I GGWCC 2 cut(s) 197, 1043
BmeRI GACNNNNNGTC 1 cut(s) 1324
BmeT110I CYCGRG 4 cut(s) 516, 564, 1248, 1870
BmgT120I GGNCC 5 cut(s) 197, 1043, 1732, 1733, 2162
BmiI GGNNCC 5 cut(s) 907, 1590, 1733, 1734, 2040
BmrFI CCNGG 2 cut(s) 1227, 1730
BmsI GCATC 4 cut(s) 156, 1201, 1486, 1597
BmtI GCTAGC 1 cut(s) 1887
BpiI GAAGAC 1 cut(s) 719
BpmI CTGGAG 1 cut(s) 1248
Bpu14I TTCGAA 1 cut(s) 125
BpuEI CTTGAG 1 cut(s) 2060
BpuMI CCSGG 1 cut(s) 1730
Bsa29I ATCGAT 1 cut(s) 1938
BsaAI YACGTR 1 cut(s) 253
BsaBI GATNNNNATC 2 cut(s) 414, 2460
BsaHI GRCGYC 1 cut(s) 2325
BsaI GGTCTC 3 cut(s) 513, 1040, 1074
BsaJI CCNNGG 6 cut(s) 57, 183, 1249, 1729, 1739, 2488
BsaWI WCCGGW 2 cut(s) 760, 1031
BsaXI ACNNNNNCTCC 4 cut(s) 351, 381, 2421, 2451
Bsc4I CCNNNNNNNGG 6 cut(s) 944, 1254, 1255, 1271, 1598, 1931
Bse118I RCCGGY 2 cut(s) 596, 1031
Bse1I ACTGG 7 cut(s) 1045, 1053, 1139, 1190, 1592, 1936, 2040
Bse3DI GCAATG 2 cut(s) 1512, 2394
Bse8I GATNNNNATC 2 cut(s) 414, 2460
BseBI CCWGG 1 cut(s) 1227
BseCI ATCGAT 1 cut(s) 1938
BseDI CCNNGG 6 cut(s) 57, 183, 1249, 1729, 1739, 2488
BseGI GGATG 4 cut(s) 70, 639, 2019, 2660
BseJI GATNNNNATC 2 cut(s) 414, 2460
BseLI CCNNNNNNNGG 6 cut(s) 944, 1254, 1255, 1271, 1598, 1931
BseMI GCAATG 2 cut(s) 1512, 2394
BseMII CTCAG 6 cut(s) 157, 525, 722, 1161, 1568, 2679
BseNI ACTGG 7 cut(s) 1045, 1053, 1139, 1190, 1592, 1936, 2040
BseRI GAGGAG 2 cut(s) 42, 74
BseSI GKGCMC 2 cut(s) 1167, 1736
BseXI GCAGC 6 cut(s) 40, 1394, 1486, 1676, 2080, 2505
BseYI CCCAGC 1 cut(s) 2184
BsgI GTGCAG 3 cut(s) 258, 309, 1401
Bsh1236I CGCG 1 cut(s) 1317
Bsh1285I CGRYCG 1 cut(s) 1032
BshFI GGCC 7 cut(s) 600, 1225, 1440, 1734, 2113, 2164, 2487
BshNI GGYRCC 2 cut(s) 905, 1588
BshTI ACCGGT 1 cut(s) 1031
BshVI ATCGAT 1 cut(s) 1938
BsiEI CGRYCG 1 cut(s) 1032
BsiHKAI GWGCWC 2 cut(s) 160, 739
BsiHKCI CYCGRG 4 cut(s) 516, 564, 1248, 1870
BsiSI CCGG 5 cut(s) 597, 761, 1032, 1729, 2440
BslI CCNNNNNNNGG 6 cut(s) 944, 1254, 1255, 1271, 1598, 1931
BsmAI GTCTC 8 cut(s) 37, 354, 513, 567, 1040, 1074, 1166, 2199
BsmI GAATGC 4 cut(s) 76, 84, 355, 1622
BsnI GGCC 7 cut(s) 600, 1225, 1440, 1734, 2113, 2164, 2487
Bso31I GGTCTC 3 cut(s) 513, 1040, 1074
BsoBI CYCGRG 4 cut(s) 516, 564, 1248, 1870
Bsp119I TTCGAA 1 cut(s) 125
Bsp120I GGGCCC 1 cut(s) 1732
Bsp1286I GDGCHC 4 cut(s) 160, 739, 1167, 1736
Bsp19I CCATGG 1 cut(s) 2488
Bsp68I TCGCGA 1 cut(s) 1317
BspACI CCGC 2 cut(s) 752, 2524
BspANI GGCC 7 cut(s) 600, 1225, 1440, 1734, 2113, 2164, 2487
BspCNI CTCAG 6 cut(s) 156, 526, 721, 1162, 1567, 2680
BspDI ATCGAT 1 cut(s) 1938
BspFNI CGCG 1 cut(s) 1317
BspHI TCATGA 2 cut(s) 118, 2278
BspLI GGNNCC 5 cut(s) 907, 1590, 1733, 1734, 2040
BspMAI CTGCAG 1 cut(s) 303
BspOI GCTAGC 1 cut(s) 1887
BspPI GGATC 5 cut(s) 71, 275, 497, 903, 1693
BspT104I TTCGAA 1 cut(s) 125
BspT107I GGYRCC 2 cut(s) 905, 1588
BspTNI GGTCTC 3 cut(s) 513, 1040, 1074
BsrDI GCAATG 2 cut(s) 1512, 2394
BsrFI RCCGGY 2 cut(s) 596, 1031
BsrI ACTGG 7 cut(s) 1045, 1053, 1139, 1190, 1592, 1936, 2040
BssAI RCCGGY 2 cut(s) 596, 1031
BssECI CCNNGG 6 cut(s) 57, 183, 1249, 1729, 1739, 2488
BssNAI GTATAC 1 cut(s) 935
BssNI GRCGYC 1 cut(s) 2325
BssT1I CCWWGG 2 cut(s) 1739, 2488
Bst1107I GTATAC 1 cut(s) 935
Bst2UI CCWGG 1 cut(s) 1227
Bst6I CTCTTC 2 cut(s) 750, 2132
BstACI GRCGYC 1 cut(s) 2325
BstAPI GCANNNNNTGC 1 cut(s) 1523
BstBAI YACGTR 1 cut(s) 253
BstBI TTCGAA 1 cut(s) 125
BstC8I GCNNGC 4 cut(s) 299, 456, 995, 1885
BstDEI CTNAG 7 cut(s) 89, 143, 534, 708, 1170, 1554, 2688
BstDSI CCRYGG 2 cut(s) 183, 2488
BstF5I GGATG 4 cut(s) 70, 639, 2019, 2660
BstFNI CGCG 1 cut(s) 1317
BstMAI GTCTC 8 cut(s) 37, 354, 513, 567, 1040, 1074, 1166, 2199
BstMCI CGRYCG 1 cut(s) 1032
BstMWI GCNNNNNNNGC 5 cut(s) 50, 845, 1523, 1831, 2493
BstNI CCWGG 1 cut(s) 1227
BstNSI RCATGY 2 cut(s) 2149, 2391
BstSCI CCNGG 2 cut(s) 1225, 1728
BstSFI CTRYAG 3 cut(s) 130, 299, 1965
BstSLI GKGCMC 2 cut(s) 1167, 1736
BstUI CGCG 1 cut(s) 1317
BstV1I GCAGC 6 cut(s) 40, 1394, 1486, 1676, 2080, 2505
BstV2I GAAGAC 1 cut(s) 719
BstX2I RGATCY 1 cut(s) 280
BstXI CCANNNNNNTGG 2 cut(s) 685, 1650
BstYI RGATCY 1 cut(s) 280
BstZ17I GTATAC 1 cut(s) 935
Bsu15I ATCGAT 1 cut(s) 1938
BsuI GTATCC 2 cut(s) 1124, 1352
BsuRI GGCC 7 cut(s) 600, 1225, 1440, 1734, 2113, 2164, 2487
BsuTUI ATCGAT 1 cut(s) 1938
BtgI CCRYGG 2 cut(s) 183, 2488
BtsCI GGATG 4 cut(s) 70, 639, 2019, 2660
BtsI GCAGTG 2 cut(s) 270, 2382
BtsIMutI CAGTG 8 cut(s) 139, 270, 405, 855, 1038, 1046, 1929, 2382
BtuMI TCGCGA 1 cut(s) 1317
Cac8I GCNNGC 4 cut(s) 299, 456, 995, 1885
CaiI CAGNNNCTG 1 cut(s) 1003
CciI TCATGA 2 cut(s) 118, 2278
Cfr10I RCCGGY 2 cut(s) 596, 1031
Cfr13I GGNCC 5 cut(s) 197, 1043, 1732, 1733, 2162
ClaI ATCGAT 1 cut(s) 1938
Csp6I GTAC 9 cut(s) 304, 491, 906, 1295, 1341, 1907, 2434, 2658, 2672
CspAI ACCGGT 1 cut(s) 1031
CspCI CAANNNNNGTGG 2 cut(s) 1524, 1559
CviQI GTAC 9 cut(s) 304, 491, 906, 1295, 1341, 1907, 2434, 2658, 2672
DdeI CTNAG 7 cut(s) 89, 143, 534, 708, 1170, 1554, 2688
DriI GACNNNNNGTC 1 cut(s) 1324
EaeI YGGCCR 2 cut(s) 1438, 2485
Eam1104I CTCTTC 2 cut(s) 750, 2132
Eam1105I GACNNNNNGTC 1 cut(s) 1324
EarI CTCTTC 2 cut(s) 750, 2132
Ecl136II GAGCTC 1 cut(s) 737
Eco130I CCWWGG 2 cut(s) 1739, 2488
Eco147I AGGCCT 1 cut(s) 2113
Eco24I GRGCYC 2 cut(s) 739, 1736
Eco31I GGTCTC 3 cut(s) 513, 1040, 1074
Eco32I GATATC 4 cut(s) 1093, 1118, 1950, 2694
Eco47I GGWCC 2 cut(s) 197, 1043
Eco53kI GAGCTC 1 cut(s) 737
Eco57I CTGAAG 3 cut(s) 1467, 2252, 2472
Eco72I CACGTG 1 cut(s) 253
Eco88I CYCGRG 4 cut(s) 516, 564, 1248, 1870
EcoICRI GAGCTC 1 cut(s) 737
EcoO109I RGGNCCY 2 cut(s) 1732, 1733
EcoRI GAATTC 1 cut(s) 2168
EcoRII CCWGG 1 cut(s) 1225
EcoRV GATATC 4 cut(s) 1093, 1118, 1950, 2694
EcoT14I CCWWGG 2 cut(s) 1739, 2488
EcoT38I GRGCYC 2 cut(s) 739, 1736
ErhI CCWWGG 2 cut(s) 1739, 2488
FalI AAGNNNNNCTT 2 cut(s) 2287, 2319
FauI CCCGC 1 cut(s) 2531
FbaI TGATCA 3 cut(s) 334, 415, 2458
FblI GTMKAC 1 cut(s) 934
Fnu4HI GCNGC 6 cut(s) 54, 1383, 1500, 1665, 2094, 2494
FokI GGATG 4 cut(s) 77, 646, 2006, 2647
FriOI GRGCYC 2 cut(s) 739, 1736
Fsp4HI GCNGC 6 cut(s) 54, 1383, 1500, 1665, 2094, 2494
GluI GCNGC 6 cut(s) 54, 1383, 1500, 1665, 2094, 2494
GsaI CCCAGC 1 cut(s) 2188
GsuI CTGGAG 1 cut(s) 1248
HaeIII GGCC 7 cut(s) 600, 1225, 1440, 1734, 2113, 2164, 2487
HapII CCGG 5 cut(s) 597, 761, 1032, 1729, 2440
Hin1I GRCGYC 1 cut(s) 2325
HincII GTYRAC 2 cut(s) 2232, 2724
HindII GTYRAC 2 cut(s) 2232, 2724
HindIII AAGCTT 2 cut(s) 452, 2353
HpaI GTTAAC 1 cut(s) 2724
HpaII CCGG 5 cut(s) 597, 761, 1032, 1729, 2440
HphI GGTGA 7 cut(s) 458, 1445, 1520, 1914, 2043, 2164, 2273
Hpy166II GTNNAC 7 cut(s) 678, 935, 1046, 2051, 2232, 2680, 2724
Hpy8I GTNNAC 7 cut(s) 678, 935, 1046, 2051, 2232, 2680, 2724
Hpy99I CGWCG 1 cut(s) 2330
HpyAV CCTTC 4 cut(s) 379, 725, 1092, 2293
HpyCH4IV ACGT 4 cut(s) 252, 2325, 2531, 2593
HpyF10VI GCNNNNNNNGC 5 cut(s) 50, 845, 1523, 1831, 2493
HpyF3I CTNAG 7 cut(s) 89, 143, 534, 708, 1170, 1554, 2688
HpySE526I ACGT 4 cut(s) 252, 2325, 2531, 2593
Hsp92I GRCGYC 1 cut(s) 2325
KpnI GGTACC 1 cut(s) 909
Ksp22I TGATCA 3 cut(s) 334, 415, 2458
KspAI GTTAAC 1 cut(s) 2724
LmnI GCTCC 2 cut(s) 155, 734
Lsp1109I GCAGC 6 cut(s) 40, 1394, 1486, 1676, 2080, 2505
LweI GCATC 4 cut(s) 156, 1201, 1486, 1597
MaeII ACGT 4 cut(s) 252, 2325, 2531, 2593
MaeIII GTNAC 5 cut(s) 258, 433, 1326, 1508, 1657
MflI RGATCY 1 cut(s) 280
MhlI GDGCHC 4 cut(s) 160, 739, 1167, 1736
MlsI TGGCCA 2 cut(s) 1440, 2487
MluNI TGGCCA 2 cut(s) 1440, 2487
MlyI GAGTC 6 cut(s) 39, 182, 569, 716, 1577, 2201
MmeI TCCRAC 5 cut(s) 337, 362, 530, 1663, 2358
Mox20I TGGCCA 2 cut(s) 1440, 2487
MscI TGGCCA 2 cut(s) 1440, 2487
MslI CAYNNNNRTG 3 cut(s) 1209, 1648, 2225
Msp20I TGGCCA 2 cut(s) 1440, 2487
MspI CCGG 5 cut(s) 597, 761, 1032, 1729, 2440
MspR9I CCNGG 2 cut(s) 1227, 1730
Mva1269I GAATGC 4 cut(s) 76, 84, 355, 1622
MvaI CCWGG 1 cut(s) 1227
MvnI CGCG 1 cut(s) 1317
MwoI GCNNNNNNNGC 5 cut(s) 50, 845, 1523, 1831, 2493
NciI CCSGG 1 cut(s) 1730
NcoI CCATGG 1 cut(s) 2488
NheI GCTAGC 1 cut(s) 1883
NlaIV GGNNCC 5 cut(s) 907, 1590, 1733, 1734, 2040
NmeAIII GCCGAG 1 cut(s) 82
NmuCI GTSAC 3 cut(s) 1326, 1508, 1657
NruI TCGCGA 1 cut(s) 1317
NspI RCATGY 2 cut(s) 2149, 2391
NspV TTCGAA 1 cut(s) 125
PaeR7I CTCGAG 3 cut(s) 516, 564, 1870
PagI TCATGA 2 cut(s) 118, 2278
PceI AGGCCT 1 cut(s) 2113
PcsI WCGNNNNNNNCGW 1 cut(s) 2331
PctI GAATGC 4 cut(s) 76, 84, 355, 1622
PfeI GAWTC 8 cut(s) 122, 547, 689, 764, 1078, 1935, 1971, 2330
PflMI CCANNNNNTGG 1 cut(s) 1271
PinAI ACCGGT 1 cut(s) 1031
PkrI GCNGC 6 cut(s) 55, 1384, 1501, 1666, 2095, 2495
PleI GAGTC 6 cut(s) 38, 181, 568, 716, 1576, 2201
PmaCI CACGTG 1 cut(s) 253
PmlI CACGTG 1 cut(s) 253
PpsI GAGTC 6 cut(s) 38, 181, 568, 716, 1576, 2201
Ppu21I YACGTR 1 cut(s) 253
PshBI ATTAAT 1 cut(s) 21
PsiI TTATAA 1 cut(s) 1853
Psp124BI GAGCTC 1 cut(s) 739
Psp6I CCWGG 1 cut(s) 1225
PspCI CACGTG 1 cut(s) 253
PspFI CCCAGC 1 cut(s) 2184
PspGI CCWGG 1 cut(s) 1225
PspN4I GGNNCC 5 cut(s) 907, 1590, 1733, 1734, 2040
PspOMI GGGCCC 1 cut(s) 1732
PspPI GGNCC 5 cut(s) 197, 1043, 1732, 1733, 2162
PspXI VCTCGAGB 1 cut(s) 1870
PsrI GAACNNNNNNTAC 2 cut(s) 1439, 1471
PstI CTGCAG 1 cut(s) 303
PstNI CAGNNNCTG 1 cut(s) 1003
PsuI RGATCY 1 cut(s) 280
RruI TCGCGA 1 cut(s) 1317
RsaI GTAC 9 cut(s) 305, 492, 907, 1296, 1342, 1908, 2435, 2659, 2673
RsaNI GTAC 9 cut(s) 304, 491, 906, 1295, 1341, 1907, 2434, 2658, 2672
RseI CAYNNNNRTG 3 cut(s) 1209, 1648, 2225
SacI GAGCTC 1 cut(s) 739
SatI GCNGC 6 cut(s) 54, 1383, 1500, 1665, 2094, 2494
Sau96I GGNCC 5 cut(s) 197, 1043, 1732, 1733, 2162
ScaI AGTACT 1 cut(s) 492
SchI GAGTC 6 cut(s) 39, 182, 569, 716, 1577, 2201
ScrFI CCNGG 2 cut(s) 1227, 1730
SduI GDGCHC 4 cut(s) 160, 739, 1167, 1736
SfaNI GCATC 4 cut(s) 156, 1201, 1486, 1597
SfcI CTRYAG 3 cut(s) 130, 299, 1965
Sfr274I CTCGAG 3 cut(s) 516, 564, 1870
SfuI TTCGAA 1 cut(s) 125
SinI GGWCC 2 cut(s) 197, 1043
SlaI CTCGAG 3 cut(s) 516, 564, 1870
SmiMI CAYNNNNRTG 3 cut(s) 1209, 1648, 2225
SmlI CTYRAG 4 cut(s) 516, 564, 1870, 2075
SmoI CTYRAG 4 cut(s) 516, 564, 1870, 2075
SseBI AGGCCT 1 cut(s) 2113
SsiI CCGC 2 cut(s) 752, 2524
SstI GAGCTC 1 cut(s) 739
StuI AGGCCT 1 cut(s) 2113
StyD4I CCNGG 2 cut(s) 1225, 1728
StyI CCWWGG 2 cut(s) 1739, 2488
TaiI ACGT 4 cut(s) 255, 2328, 2534, 2596
TatI WGTACW 4 cut(s) 490, 1906, 2657, 2671
TfiI GAWTC 8 cut(s) 122, 547, 689, 764, 1078, 1935, 1971, 2330
TscAI CASTG 8 cut(s) 139, 277, 412, 862, 1045, 1053, 1936, 2389
TseFI GTSAC 3 cut(s) 1326, 1508, 1657
TseI GCWGC 6 cut(s) 53, 1382, 1499, 1664, 2093, 2493
Tsp45I GTSAC 3 cut(s) 1326, 1508, 1657
TspGWI ACGGA 1 cut(s) 1367
TspRI CASTG 8 cut(s) 139, 277, 412, 862, 1045, 1053, 1936, 2389
Van91I CCANNNNNTGG 1 cut(s) 1271
VpaK11BI GGWCC 2 cut(s) 197, 1043
VspI ATTAAT 1 cut(s) 21
XapI RAATTY 3 cut(s) 101, 2168, 2274
XbaI TCTAGA 2 cut(s) 2030, 2473
XceI RCATGY 2 cut(s) 2149, 2391
XhoI CTCGAG 3 cut(s) 516, 564, 1870
XmaJI CCTAGG 1 cut(s) 1739
XmiI GTMKAC 1 cut(s) 934
ZraI GACGTC 1 cut(s) 2326
ZrmI AGTACT 1 cut(s) 492
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.