repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46050 |
| fragaria_vesca | FvH4_7g14820 |
| malus_domestica | MD01G1066700.v1.1 MD11G1207600.v1.1 |
| pyrus_communis | pycom01g09600 pycom01g22640 pycom17g24510 |
| rosa_chinensis | RchiOBHm_Chr1g0356771 RchiOBHm_Chr1g0356781 RchiOBHm_Chr1g0375691 RchiOBHm_Chr2g0089631 RchiOBHm_Chr4g0418871 |
| rosa_laevigata | RLG00000011901 RLG00000028084 |
| rosa_multiflora | Rmu_co8104928.1_g000001 Rmu_co8368077.1_g000001 Rmu_sc0000517.1_g000030 Rmu_sc0000935.1_g000021 Rmu_sc0002219.1_g000014 Rmu_sc0005718.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00299370 |
| rosa_rugosa | Rorug01G0251100 |
| rosa_samantha | Rh1AG265300 Rh1AG265400 Rh1BG232700 Rh1BG232800 Rh1CG248800 Rh1CG248900 Rh1DG260300 Rh4BG214000 Rh6AG008500 |
| rosa_wichuraiana | Rw4G018520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 990 |
| Acc36I | ACCTGC | 1 cut(s) | 1463 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1590 |
| AciI | CCGC | 2 cut(s) | 605, 1688 |
| AclWI | GGATC | 5 cut(s) | 38, 156, 429, 776, 1201 |
| AcsI | RAATTY | 4 cut(s) | 257, 1061, 1174, 1504 |
| AcuI | CTGAAG | 3 cut(s) | 1203, 1221, 1689 |
| AcvI | CACGTG | 1 cut(s) | 1446 |
| AfaI | GTAC | 2 cut(s) | 457, 541 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1164, 1590 |
| AflIII | ACRYGT | 2 cut(s) | 1443, 1445 |
| AhlI | ACTAGT | 1 cut(s) | 542 |
| AjiI | CACGTC | 1 cut(s) | 163 |
| AjnI | CCWGG | 2 cut(s) | 1163, 1738 |
| AleI | CACNNNNGTG | 1 cut(s) | 410 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1356, 1388 |
| Alw21I | GWGCWC | 1 cut(s) | 370 |
| Alw26I | GTCTC | 4 cut(s) | 339, 578, 976, 1669 |
| AlwI | GGATC | 5 cut(s) | 38, 156, 429, 776, 1201 |
| Ama87I | CYCGRG | 2 cut(s) | 745, 885 |
| AoxI | GGCC | 1 cut(s) | 1672 |
| ApeKI | GCWGC | 2 cut(s) | 1303, 1541 |
| ApoI | RAATTY | 4 cut(s) | 257, 1061, 1174, 1504 |
| AspLEI | GCGC | 1 cut(s) | 1058 |
| AsuHPI | GGTGA | 4 cut(s) | 96, 362, 517, 740 |
| AsuNHI | GCTAGC | 1 cut(s) | 140 |
| AvaI | CYCGRG | 2 cut(s) | 745, 885 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 437, 470 |
| BanII | GRGCYC | 3 cut(s) | 370, 1118, 1386 |
| BbrPI | CACGTG | 1 cut(s) | 1446 |
| BbsI | GAAGAC | 1 cut(s) | 743 |
| Bbv12I | GWGCWC | 1 cut(s) | 370 |
| BbvI | GCAGC | 2 cut(s) | 1290, 1553 |
| BccI | CCATC | 6 cut(s) | 54, 496, 694, 898, 1093, 1652 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 826, 860 |
| BciT130I | CCWGG | 2 cut(s) | 1165, 1740 |
| BciVI | GTATCC | 1 cut(s) | 494 |
| BcoDI | GTCTC | 4 cut(s) | 339, 578, 976, 1669 |
| BcuI | ACTAGT | 1 cut(s) | 542 |
| BfaI | CTAG | 6 cut(s) | 141, 374, 543, 548, 1754, 1771 |
| BfmI | CTRYAG | 2 cut(s) | 108, 1304 |
| BfuAI | ACCTGC | 1 cut(s) | 1463 |
| BfuI | GTATCC | 1 cut(s) | 494 |
| BisI | GCNGC | 3 cut(s) | 1304, 1542, 1689 |
| BlpI | GCTNAGC | 1 cut(s) | 1117 |
| BlsI | GCNGC | 3 cut(s) | 1305, 1543, 1690 |
| BmcAI | AGTACT | 1 cut(s) | 541 |
| Bme1390I | CCNGG | 2 cut(s) | 1165, 1740 |
| BmeT110I | CYCGRG | 2 cut(s) | 745, 885 |
| BmgBI | CACGTC | 1 cut(s) | 163 |
| BmiI | GGNNCC | 1 cut(s) | 1385 |
| BmrFI | CCNGG | 2 cut(s) | 1165, 1740 |
| BmsI | GCATC | 2 cut(s) | 256, 871 |
| BmtI | GCTAGC | 1 cut(s) | 144 |
| BpiI | GAAGAC | 1 cut(s) | 743 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 868, 900 |
| BpmI | CTGGAG | 2 cut(s) | 1147, 1722 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1117 |
| BpuEI | CTTGAG | 2 cut(s) | 677, 1025 |
| Bsa29I | ATCGAT | 2 cut(s) | 902, 1455 |
| BsaAI | YACGTR | 1 cut(s) | 1446 |
| BsaI | GGTCTC | 1 cut(s) | 578 |
| BsaJI | CCNNGG | 1 cut(s) | 1360 |
| BsaWI | WCCGGW | 1 cut(s) | 829 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1356, 1386 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1164, 1590 |
| Bse3DI | GCAATG | 1 cut(s) | 842 |
| BseBI | CCWGG | 2 cut(s) | 1165, 1740 |
| BseCI | ATCGAT | 2 cut(s) | 902, 1455 |
| BseDI | CCNNGG | 1 cut(s) | 1360 |
| BseGI | GGATG | 5 cut(s) | 62, 1438, 1562, 1563, 1644 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1164, 1590 |
| BseMI | GCAATG | 1 cut(s) | 842 |
| BseMII | CTCAG | 3 cut(s) | 769, 1131, 1398 |
| BseRI | GAGGAG | 1 cut(s) | 1726 |
| BseXI | GCAGC | 2 cut(s) | 1290, 1553 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1137 |
| BshFI | GGCC | 1 cut(s) | 1674 |
| BshVI | ATCGAT | 2 cut(s) | 902, 1455 |
| BsiEI | CGRYCG | 1 cut(s) | 1137 |
| BsiHKAI | GWGCWC | 1 cut(s) | 370 |
| BsiHKCI | CYCGRG | 2 cut(s) | 745, 885 |
| BsiSI | CCGG | 1 cut(s) | 830 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1164, 1590 |
| BsmAI | GTCTC | 4 cut(s) | 339, 578, 976, 1669 |
| BsmBI | CGTCTC | 1 cut(s) | 339 |
| BsmI | GAATGC | 1 cut(s) | 937 |
| BsnI | GGCC | 1 cut(s) | 1674 |
| Bso31I | GGTCTC | 1 cut(s) | 578 |
| BsoBI | CYCGRG | 2 cut(s) | 745, 885 |
| Bsp1286I | GDGCHC | 3 cut(s) | 370, 1118, 1386 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1117 |
| Bsp19I | CCATGG | 1 cut(s) | 1360 |
| BspACI | CCGC | 2 cut(s) | 605, 1688 |
| BspANI | GGCC | 1 cut(s) | 1674 |
| BspCNI | CTCAG | 3 cut(s) | 768, 1130, 1399 |
| BspDI | ATCGAT | 2 cut(s) | 902, 1455 |
| BspLI | GGNNCC | 1 cut(s) | 1385 |
| BspMAI | CTGCAG | 1 cut(s) | 1308 |
| BspMI | ACCTGC | 1 cut(s) | 1463 |
| BspOI | GCTAGC | 1 cut(s) | 144 |
| BspPI | GGATC | 5 cut(s) | 38, 156, 429, 776, 1201 |
| BspQI | GCTCTTC | 1 cut(s) | 284 |
| BspTNI | GGTCTC | 1 cut(s) | 578 |
| BsrDI | GCAATG | 1 cut(s) | 842 |
| BssECI | CCNNGG | 1 cut(s) | 1360 |
| BssT1I | CCWWGG | 1 cut(s) | 1360 |
| Bst2UI | CCWGG | 2 cut(s) | 1165, 1740 |
| Bst4CI | ACNGT | 4 cut(s) | 350, 450, 497, 665 |
| Bst6I | CTCTTC | 3 cut(s) | 284, 806, 964 |
| BstBAI | YACGTR | 1 cut(s) | 1446 |
| BstC8I | GCNNGC | 5 cut(s) | 142, 237, 763, 1095, 1283 |
| BstDEI | CTNAG | 5 cut(s) | 755, 861, 1046, 1117, 1407 |
| BstDSI | CCRYGG | 1 cut(s) | 1360 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1162 |
| BstF5I | GGATG | 5 cut(s) | 62, 1438, 1562, 1563, 1644 |
| BstHHI | GCGC | 1 cut(s) | 1058 |
| BstMAI | GTCTC | 4 cut(s) | 339, 578, 976, 1669 |
| BstMCI | CGRYCG | 1 cut(s) | 1137 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1541 |
| BstNI | CCWGG | 2 cut(s) | 1165, 1740 |
| BstNSI | RCATGY | 2 cut(s) | 765, 1535 |
| BstSCI | CCNGG | 2 cut(s) | 1163, 1738 |
| BstSFI | CTRYAG | 2 cut(s) | 108, 1304 |
| BstV1I | GCAGC | 2 cut(s) | 1290, 1553 |
| BstV2I | GAAGAC | 1 cut(s) | 743 |
| BstX2I | RGATCY | 1 cut(s) | 30 |
| BstYI | RGATCY | 1 cut(s) | 30 |
| Bsu15I | ATCGAT | 2 cut(s) | 902, 1455 |
| BsuI | GTATCC | 1 cut(s) | 494 |
| BsuRI | GGCC | 1 cut(s) | 1674 |
| BsuTUI | ATCGAT | 2 cut(s) | 902, 1455 |
| BtgI | CCRYGG | 1 cut(s) | 1360 |
| BtgZI | GCGATG | 2 cut(s) | 950, 1112 |
| BtrI | CACGTC | 1 cut(s) | 163 |
| BtsCI | GGATG | 5 cut(s) | 62, 1438, 1562, 1563, 1644 |
| BtsIMutI | CAGTG | 4 cut(s) | 405, 493, 763, 1245 |
| BveI | ACCTGC | 1 cut(s) | 1463 |
| Cac8I | GCNNGC | 5 cut(s) | 142, 237, 763, 1095, 1283 |
| CfoI | GCGC | 1 cut(s) | 1058 |
| ClaI | ATCGAT | 2 cut(s) | 902, 1455 |
| Csp6I | GTAC | 2 cut(s) | 456, 540 |
| CviQI | GTAC | 2 cut(s) | 456, 540 |
| DdeI | CTNAG | 5 cut(s) | 755, 861, 1046, 1117, 1407 |
| DraI | TTTAAA | 1 cut(s) | 1503 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 990 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 990 |
| Eam1104I | CTCTTC | 3 cut(s) | 284, 806, 964 |
| EarI | CTCTTC | 3 cut(s) | 284, 806, 964 |
| Ecl136II | GAGCTC | 1 cut(s) | 368 |
| Eco130I | CCWWGG | 1 cut(s) | 1360 |
| Eco24I | GRGCYC | 3 cut(s) | 370, 1118, 1386 |
| Eco31I | GGTCTC | 1 cut(s) | 578 |
| Eco53kI | GAGCTC | 1 cut(s) | 368 |
| Eco57I | CTGAAG | 3 cut(s) | 1203, 1221, 1689 |
| Eco72I | CACGTG | 1 cut(s) | 1446 |
| Eco88I | CYCGRG | 2 cut(s) | 745, 885 |
| EcoICRI | GAGCTC | 1 cut(s) | 368 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1162 |
| EcoRI | GAATTC | 1 cut(s) | 257 |
| EcoRII | CCWGG | 2 cut(s) | 1163, 1738 |
| EcoT14I | CCWWGG | 1 cut(s) | 1360 |
| EcoT38I | GRGCYC | 3 cut(s) | 370, 1118, 1386 |
| ErhI | CCWWGG | 1 cut(s) | 1360 |
| Esp3I | CGTCTC | 1 cut(s) | 339 |
| Fnu4HI | GCNGC | 3 cut(s) | 1304, 1542, 1689 |
| FokI | GGATG | 5 cut(s) | 49, 1445, 1550, 1569, 1631 |
| FriOI | GRGCYC | 3 cut(s) | 370, 1118, 1386 |
| Fsp4HI | GCNGC | 3 cut(s) | 1304, 1542, 1689 |
| FspBI | CTAG | 6 cut(s) | 141, 374, 543, 548, 1754, 1771 |
| GlaI | GCGC | 1 cut(s) | 1057 |
| GluI | GCNGC | 3 cut(s) | 1304, 1542, 1689 |
| GsuI | CTGGAG | 2 cut(s) | 1147, 1722 |
| HaeIII | GGCC | 1 cut(s) | 1674 |
| HapII | CCGG | 1 cut(s) | 830 |
| HhaI | GCGC | 1 cut(s) | 1058 |
| Hin6I | GCGC | 1 cut(s) | 1056 |
| HinP1I | GCGC | 1 cut(s) | 1056 |
| HindIII | AAGCTT | 4 cut(s) | 237, 678, 1279, 1604 |
| HpaII | CCGG | 1 cut(s) | 830 |
| HphI | GGTGA | 4 cut(s) | 96, 362, 517, 740 |
| Hpy166II | GTNNAC | 3 cut(s) | 456, 689, 1636 |
| Hpy188III | TCNNGA | 5 cut(s) | 518, 745, 887, 1376, 1610 |
| Hpy8I | GTNNAC | 3 cut(s) | 456, 689, 1636 |
| Hpy99I | CGWCG | 3 cut(s) | 287, 652, 1487 |
| HpyAV | CCTTC | 4 cut(s) | 99, 959, 1373, 1664 |
| HpyCH4III | ACNGT | 4 cut(s) | 350, 450, 497, 665 |
| HpyCH4IV | ACGT | 2 cut(s) | 162, 1445 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1541 |
| HpyF3I | CTNAG | 5 cut(s) | 755, 861, 1046, 1117, 1407 |
| HpySE526I | ACGT | 2 cut(s) | 162, 1445 |
| HspAI | GCGC | 1 cut(s) | 1056 |
| LguI | GCTCTTC | 1 cut(s) | 284 |
| LmnI | GCTCC | 3 cut(s) | 1005, 1247, 1389 |
| Lsp1109I | GCAGC | 2 cut(s) | 1290, 1553 |
| LweI | GCATC | 2 cut(s) | 256, 871 |
| MaeI | CTAG | 6 cut(s) | 141, 374, 543, 548, 1754, 1771 |
| MaeII | ACGT | 2 cut(s) | 162, 1445 |
| MaeIII | GTNAC | 5 cut(s) | 307, 350, 866, 1102, 1559 |
| MflI | RGATCY | 1 cut(s) | 30 |
| MhlI | GDGCHC | 3 cut(s) | 370, 1118, 1386 |
| MlyI | GAGTC | 2 cut(s) | 400, 757 |
| MmeI | TCCRAC | 1 cut(s) | 374 |
| MnlI | CCTC | 9 cut(s) | 26, 130, 595, 1333, 1358, 1423, 1480, 1547, 1704 |
| MseI | TTAA | 3 cut(s) | 660, 1083, 1502 |
| MslI | CAYNNNNRTG | 5 cut(s) | 410, 558, 830, 876, 1192 |
| MspI | CCGG | 1 cut(s) | 830 |
| MspR9I | CCNGG | 2 cut(s) | 1165, 1740 |
| Mva1269I | GAATGC | 1 cut(s) | 937 |
| MvaI | CCWGG | 2 cut(s) | 1165, 1740 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1541 |
| NcoI | CCATGG | 1 cut(s) | 1360 |
| NheI | GCTAGC | 1 cut(s) | 140 |
| NlaIV | GGNNCC | 1 cut(s) | 1385 |
| NmuCI | GTSAC | 1 cut(s) | 350 |
| NspI | RCATGY | 2 cut(s) | 765, 1535 |
| OliI | CACNNNNGTG | 1 cut(s) | 410 |
| PaeI | GCATGC | 1 cut(s) | 765 |
| PaeR7I | CTCGAG | 1 cut(s) | 745 |
| PciSI | GCTCTTC | 1 cut(s) | 284 |
| PctI | GAATGC | 1 cut(s) | 937 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1590 |
| PfoI | TCCNGGA | 1 cut(s) | 1163 |
| PkrI | GCNGC | 3 cut(s) | 1305, 1543, 1690 |
| PleI | GAGTC | 2 cut(s) | 399, 756 |
| PmaCI | CACGTG | 1 cut(s) | 1446 |
| PmlI | CACGTG | 1 cut(s) | 1446 |
| PpsI | GAGTC | 2 cut(s) | 399, 756 |
| Ppu21I | YACGTR | 1 cut(s) | 1446 |
| Psp124BI | GAGCTC | 1 cut(s) | 370 |
| Psp6I | CCWGG | 2 cut(s) | 1163, 1738 |
| PspCI | CACGTG | 1 cut(s) | 1446 |
| PspGI | CCWGG | 2 cut(s) | 1163, 1738 |
| PspN4I | GGNNCC | 1 cut(s) | 1385 |
| PstI | CTGCAG | 1 cut(s) | 1308 |
| PsuI | RGATCY | 1 cut(s) | 30 |
| RsaI | GTAC | 2 cut(s) | 457, 541 |
| RsaNI | GTAC | 2 cut(s) | 456, 540 |
| RseI | CAYNNNNRTG | 5 cut(s) | 410, 558, 830, 876, 1192 |
| SacI | GAGCTC | 1 cut(s) | 370 |
| SapI | GCTCTTC | 1 cut(s) | 284 |
| SaqAI | TTAA | 3 cut(s) | 660, 1083, 1502 |
| SatI | GCNGC | 3 cut(s) | 1304, 1542, 1689 |
| ScaI | AGTACT | 1 cut(s) | 541 |
| SchI | GAGTC | 2 cut(s) | 400, 757 |
| ScrFI | CCNGG | 2 cut(s) | 1165, 1740 |
| SduI | GDGCHC | 3 cut(s) | 370, 1118, 1386 |
| SfaNI | GCATC | 2 cut(s) | 256, 871 |
| SfcI | CTRYAG | 2 cut(s) | 108, 1304 |
| Sfr274I | CTCGAG | 1 cut(s) | 745 |
| SlaI | CTCGAG | 1 cut(s) | 745 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 410, 558, 830, 876, 1192 |
| SmlI | CTYRAG | 3 cut(s) | 692, 745, 1004 |
| SmoI | CTYRAG | 3 cut(s) | 692, 745, 1004 |
| SpeI | ACTAGT | 1 cut(s) | 542 |
| SphI | GCATGC | 1 cut(s) | 765 |
| SsiI | CCGC | 2 cut(s) | 605, 1688 |
| SspI | AATATT | 1 cut(s) | 304 |
| SspMI | CTAG | 6 cut(s) | 141, 374, 543, 548, 1754, 1771 |
| SstI | GAGCTC | 1 cut(s) | 370 |
| StyD4I | CCNGG | 2 cut(s) | 1163, 1738 |
| StyI | CCWWGG | 1 cut(s) | 1360 |
| TaaI | ACNGT | 4 cut(s) | 350, 450, 497, 665 |
| TaiI | ACGT | 2 cut(s) | 165, 1448 |
| TaqII | GACCGA | 1 cut(s) | 1123 |
| TatI | WGTACW | 2 cut(s) | 455, 539 |
| TauI | GCSGC | 1 cut(s) | 1691 |
| Tru1I | TTAA | 3 cut(s) | 660, 1083, 1502 |
| Tru9I | TTAA | 3 cut(s) | 660, 1083, 1502 |
| TscAI | CASTG | 4 cut(s) | 412, 500, 763, 1245 |
| TseFI | GTSAC | 1 cut(s) | 350 |
| TseI | GCWGC | 2 cut(s) | 1303, 1541 |
| Tsp45I | GTSAC | 1 cut(s) | 350 |
| TspGWI | ACGGA | 1 cut(s) | 1376 |
| TspRI | CASTG | 4 cut(s) | 412, 500, 763, 1245 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1590 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1162 |
| XapI | RAATTY | 4 cut(s) | 257, 1061, 1174, 1504 |
| XceI | RCATGY | 2 cut(s) | 765, 1535 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1746 |
| XhoI | CTCGAG | 1 cut(s) | 745 |
| XspI | CTAG | 6 cut(s) | 141, 374, 543, 548, 1754, 1771 |
| ZrmI | AGTACT | 1 cut(s) | 541 |