Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46050 |
| fragaria_vesca | FvH4_7g14820 |
| malus_domestica | MD01G1066700.v1.1 MD11G1207600.v1.1 |
| pyrus_communis | pycom01g09600 pycom01g22640 pycom17g24510 |
| rosa_chinensis | RchiOBHm_Chr1g0356771 RchiOBHm_Chr1g0356781 RchiOBHm_Chr1g0375691 RchiOBHm_Chr2g0089631 RchiOBHm_Chr4g0418871 |
| rosa_laevigata | RLG00000011901 RLG00000028084 |
| rosa_multiflora | Rmu_co8104928.1_g000001 Rmu_co8368077.1_g000001 Rmu_sc0000517.1_g000030 Rmu_sc0000935.1_g000021 Rmu_sc0002219.1_g000014 Rmu_sc0005718.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00299370 |
| rosa_rugosa | Rorug01G0251100 |
| rosa_samantha | Rh1AG265300 Rh1AG265400 Rh1BG232700 Rh1BG232800 Rh1CG248800 Rh1CG248900 Rh1DG260300 Rh4BG214000 Rh6AG008500 |
| rosa_wichuraiana | Rw4G018520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 190 |
| AclWI | GGATC | 1 cut(s) | 200 |
| AcuI | CTGAAG | 1 cut(s) | 369 |
| AfaI | GTAC | 4 cut(s) | 214, 322, 378, 399 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 17 |
| AluBI | AGCT | 2 cut(s) | 152, 286 |
| AluI | AGCT | 2 cut(s) | 152, 286 |
| Alw26I | GTCTC | 1 cut(s) | 134 |
| AlwI | GGATC | 1 cut(s) | 200 |
| ApeKI | GCWGC | 1 cut(s) | 275 |
| AseI | ATTAAT | 1 cut(s) | 80 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 389 |
| BbvI | GCAGC | 1 cut(s) | 262 |
| BcoDI | GTCTC | 1 cut(s) | 134 |
| BfmI | CTRYAG | 1 cut(s) | 276 |
| BisI | GCNGC | 1 cut(s) | 276 |
| BlsI | GCNGC | 1 cut(s) | 277 |
| BsaBI | GATNNNNATC | 1 cut(s) | 194 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 36, 66 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 17 |
| Bse8I | GATNNNNATC | 1 cut(s) | 194 |
| BseGI | GGATG | 1 cut(s) | 169 |
| BseJI | GATNNNNATC | 1 cut(s) | 194 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 17 |
| BseXI | GCAGC | 1 cut(s) | 262 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 17 |
| BsmAI | GTCTC | 1 cut(s) | 134 |
| BsmI | GAATGC | 1 cut(s) | 224 |
| Bsp143I | GATC | 2 cut(s) | 205, 390 |
| BspMAI | CTGCAG | 1 cut(s) | 280 |
| BspPI | GGATC | 1 cut(s) | 200 |
| BssMI | GATC | 2 cut(s) | 205, 390 |
| Bst4CI | ACNGT | 1 cut(s) | 402 |
| BstC8I | GCNNGC | 1 cut(s) | 150 |
| BstF5I | GGATG | 1 cut(s) | 169 |
| BstKTI | GATC | 2 cut(s) | 208, 393 |
| BstMAI | GTCTC | 1 cut(s) | 134 |
| BstMBI | GATC | 2 cut(s) | 205, 390 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 272, 368 |
| BstNSI | RCATGY | 1 cut(s) | 36 |
| BstSFI | CTRYAG | 1 cut(s) | 276 |
| BstV1I | GCAGC | 1 cut(s) | 262 |
| BtsCI | GGATG | 1 cut(s) | 169 |
| Cac8I | GCNNGC | 1 cut(s) | 150 |
| Csp6I | GTAC | 4 cut(s) | 213, 321, 377, 398 |
| CviAII | CATG | 3 cut(s) | 33, 41, 328 |
| CviJI | RGCY | 7 cut(s) | 64, 152, 170, 236, 275, 286, 362 |
| CviKI_1 | RGCY | 7 cut(s) | 64, 152, 170, 236, 275, 286, 362 |
| CviQI | GTAC | 4 cut(s) | 213, 321, 377, 398 |
| DpnI | GATC | 2 cut(s) | 207, 392 |
| DpnII | GATC | 2 cut(s) | 205, 390 |
| DraI | TTTAAA | 1 cut(s) | 76 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 190 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 190 |
| Eco57I | CTGAAG | 1 cut(s) | 369 |
| FaeI | CATG | 3 cut(s) | 36, 44, 331 |
| FaiI | YATR | 5 cut(s) | 34, 42, 123, 230, 329 |
| FatI | CATG | 3 cut(s) | 32, 40, 327 |
| Fnu4HI | GCNGC | 1 cut(s) | 276 |
| FokI | GGATG | 1 cut(s) | 176 |
| Fsp4HI | GCNGC | 1 cut(s) | 276 |
| GluI | GCNGC | 1 cut(s) | 276 |
| Hin1II | CATG | 3 cut(s) | 36, 44, 331 |
| HindIII | AAGCTT | 1 cut(s) | 284 |
| HinfI | GANTC | 1 cut(s) | 110 |
| Hpy188I | TCNGA | 1 cut(s) | 115 |
| Hpy188III | TCNNGA | 1 cut(s) | 107 |
| HpyAV | CCTTC | 2 cut(s) | 149, 344 |
| HpyCH4III | ACNGT | 1 cut(s) | 402 |
| HpyCH4V | TGCA | 3 cut(s) | 32, 278, 371 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 272, 368 |
| Hsp92II | CATG | 3 cut(s) | 36, 44, 331 |
| Kzo9I | GATC | 2 cut(s) | 205, 390 |
| LmnI | GCTCC | 1 cut(s) | 221 |
| LpnPI | CCDG | 5 cut(s) | 120, 138, 139, 216, 324 |
| Lsp1109I | GCAGC | 1 cut(s) | 262 |
| MalI | GATC | 2 cut(s) | 207, 392 |
| MboI | GATC | 2 cut(s) | 205, 390 |
| MluCI | AATT | 3 cut(s) | 5, 77, 316 |
| MnlI | CCTC | 4 cut(s) | 38, 160, 196, 388 |
| MseI | TTAA | 2 cut(s) | 75, 80 |
| Mva1269I | GAATGC | 1 cut(s) | 224 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 272, 368 |
| NdeII | GATC | 2 cut(s) | 205, 390 |
| NlaIII | CATG | 3 cut(s) | 36, 44, 331 |
| NspI | RCATGY | 1 cut(s) | 36 |
| PctI | GAATGC | 1 cut(s) | 224 |
| PfeI | GAWTC | 1 cut(s) | 110 |
| PkrI | GCNGC | 1 cut(s) | 277 |
| PshBI | ATTAAT | 1 cut(s) | 80 |
| PstI | CTGCAG | 1 cut(s) | 280 |
| RsaI | GTAC | 4 cut(s) | 214, 322, 378, 399 |
| RsaNI | GTAC | 4 cut(s) | 213, 321, 377, 398 |
| SaqAI | TTAA | 2 cut(s) | 75, 80 |
| SatI | GCNGC | 1 cut(s) | 276 |
| Sau3AI | GATC | 2 cut(s) | 205, 390 |
| SetI | ASST | 9 cut(s) | 128, 141, 154, 188, 205, 288, 313, 355, 399 |
| SfcI | CTRYAG | 1 cut(s) | 276 |
| Sse9I | AATT | 3 cut(s) | 5, 77, 316 |
| TaaI | ACNGT | 1 cut(s) | 402 |
| TaqI | TCGA | 2 cut(s) | 188, 393 |
| TasI | AATT | 3 cut(s) | 5, 77, 316 |
| TatI | WGTACW | 2 cut(s) | 212, 320 |
| TfiI | GAWTC | 1 cut(s) | 110 |
| Tru1I | TTAA | 2 cut(s) | 75, 80 |
| Tru9I | TTAA | 2 cut(s) | 75, 80 |
| TseI | GCWGC | 1 cut(s) | 275 |
| TspDTI | ATGAA | 3 cut(s) | 56, 163, 217 |
| VspI | ATTAAT | 1 cut(s) | 80 |
| XceI | RCATGY | 1 cut(s) | 36 |