Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46050 |
| fragaria_vesca | FvH4_7g14820 |
| malus_domestica | MD01G1066700.v1.1 MD11G1207600.v1.1 |
| pyrus_communis | pycom01g09600 pycom01g22640 pycom17g24510 |
| rosa_chinensis | RchiOBHm_Chr1g0356771 RchiOBHm_Chr1g0356781 RchiOBHm_Chr1g0375691 RchiOBHm_Chr2g0089631 RchiOBHm_Chr4g0418871 |
| rosa_laevigata | RLG00000011901 RLG00000028084 |
| rosa_multiflora | Rmu_co8104928.1_g000001 Rmu_co8368077.1_g000001 Rmu_sc0000517.1_g000030 Rmu_sc0000935.1_g000021 Rmu_sc0002219.1_g000014 Rmu_sc0005718.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00299370 |
| rosa_rugosa | Rorug01G0251100 |
| rosa_samantha | Rh1AG265300 Rh1AG265400 Rh1BG232700 Rh1BG232800 Rh1CG248800 Rh1CG248900 Rh1DG260300 Rh4BG214000 Rh6AG008500 |
| rosa_wichuraiana | Rw4G018520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 202 |
| AfaI | GTAC | 1 cut(s) | 276 |
| AflIII | ACRYGT | 1 cut(s) | 63 |
| AgsI | TTSAA | 1 cut(s) | 185 |
| AluBI | AGCT | 1 cut(s) | 261 |
| AluI | AGCT | 1 cut(s) | 261 |
| AspLEI | GCGC | 1 cut(s) | 52 |
| BccI | CCATC | 2 cut(s) | 128, 286 |
| BfaI | CTAG | 1 cut(s) | 14 |
| BmsI | GCATC | 1 cut(s) | 100 |
| Bse3DI | GCAATG | 3 cut(s) | 97, 120, 277 |
| BseMI | GCAATG | 3 cut(s) | 97, 120, 277 |
| BspACI | CCGC | 1 cut(s) | 202 |
| BsrDI | GCAATG | 3 cut(s) | 97, 120, 277 |
| Bst4CI | ACNGT | 1 cut(s) | 9 |
| BstC8I | GCNNGC | 2 cut(s) | 97, 250 |
| BstHHI | GCGC | 1 cut(s) | 52 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 96, 101, 110, 258, 267 |
| BstNSI | RCATGY | 1 cut(s) | 67 |
| BtsIMutI | CAGTG | 1 cut(s) | 5 |
| Cac8I | GCNNGC | 2 cut(s) | 97, 250 |
| CfoI | GCGC | 1 cut(s) | 52 |
| Csp6I | GTAC | 1 cut(s) | 275 |
| CviAII | CATG | 4 cut(s) | 64, 170, 264, 305 |
| CviJI | RGCY | 2 cut(s) | 104, 261 |
| CviKI_1 | RGCY | 2 cut(s) | 104, 261 |
| CviQI | GTAC | 1 cut(s) | 275 |
| FaeI | CATG | 4 cut(s) | 67, 173, 267, 308 |
| FatI | CATG | 4 cut(s) | 63, 169, 263, 304 |
| FauI | CCCGC | 1 cut(s) | 195 |
| FspBI | CTAG | 1 cut(s) | 14 |
| GlaI | GCGC | 1 cut(s) | 51 |
| HhaI | GCGC | 1 cut(s) | 52 |
| Hin1II | CATG | 4 cut(s) | 67, 173, 267, 308 |
| Hin6I | GCGC | 1 cut(s) | 50 |
| HinP1I | GCGC | 1 cut(s) | 50 |
| HinfI | GANTC | 1 cut(s) | 181 |
| Hpy188III | TCNNGA | 2 cut(s) | 124, 230 |
| HpyCH4III | ACNGT | 1 cut(s) | 9 |
| HpyCH4IV | ACGT | 1 cut(s) | 326 |
| HpyCH4V | TGCA | 1 cut(s) | 113 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 96, 101, 110, 258, 267 |
| HpySE526I | ACGT | 1 cut(s) | 326 |
| Hsp92II | CATG | 4 cut(s) | 67, 173, 267, 308 |
| HspAI | GCGC | 1 cut(s) | 50 |
| LpnPI | CCDG | 5 cut(s) | 25, 60, 230, 243, 306 |
| LweI | GCATC | 1 cut(s) | 100 |
| MaeI | CTAG | 1 cut(s) | 14 |
| MaeII | ACGT | 1 cut(s) | 326 |
| MaeIII | GTNAC | 2 cut(s) | 9, 80 |
| MluCI | AATT | 1 cut(s) | 150 |
| MseI | TTAA | 1 cut(s) | 26 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 96, 101, 110, 258, 267 |
| NlaIII | CATG | 4 cut(s) | 67, 173, 267, 308 |
| NspI | RCATGY | 1 cut(s) | 67 |
| PciI | ACATGT | 1 cut(s) | 63 |
| PfeI | GAWTC | 1 cut(s) | 181 |
| PscI | ACATGT | 1 cut(s) | 63 |
| RsaI | GTAC | 1 cut(s) | 276 |
| RsaNI | GTAC | 1 cut(s) | 275 |
| SaqAI | TTAA | 1 cut(s) | 26 |
| SetI | ASST | 4 cut(s) | 44, 57, 263, 329 |
| SfaNI | GCATC | 1 cut(s) | 100 |
| Sse9I | AATT | 1 cut(s) | 150 |
| SsiI | CCGC | 1 cut(s) | 202 |
| SspI | AATATT | 1 cut(s) | 30 |
| SspMI | CTAG | 1 cut(s) | 14 |
| TaaI | ACNGT | 1 cut(s) | 9 |
| TaiI | ACGT | 1 cut(s) | 329 |
| TasI | AATT | 1 cut(s) | 150 |
| TfiI | GAWTC | 1 cut(s) | 181 |
| Tru1I | TTAA | 1 cut(s) | 26 |
| Tru9I | TTAA | 1 cut(s) | 26 |
| TscAI | CASTG | 1 cut(s) | 12 |
| TspDTI | ATGAA | 2 cut(s) | 293, 303 |
| TspRI | CASTG | 1 cut(s) | 12 |
| XceI | RCATGY | 1 cut(s) | 67 |
| XspI | CTAG | 1 cut(s) | 14 |