Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0004368

Physical Location & Seq

Genomic Coordinates Forward (+)

10451022 .. 10453007

Gene Structure 1986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g09600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1986 bp

ATGCTGTCCAGATGCCGCTTATCTTCAATCCCCACCGTCCACTTCAAACGACCGTTACGTTTCCCGCCAACCCCTCCTCCTGCTTCATTTCAAACCAATACAGACGCCCCAAATCATGCCCACCCATTTCATCAAACCAACTCGTCTTTCCCTCCGAGTCGACGCAGTGCCTTCACGCCGGTGGTCGAATCCGCCCATTACTTCTGCTCCAACGCCCTCAAAGTTTCAGCCAAAATGGGTTTTCTTTGCGAGGGAAAACAATTCCATGGACATGTGGTAAAGTTGGGTCTGCATAACCTGCAGTCGCTGCAAATTCATGTCCTGAATTTATACGTCAAGTGCAAGGAATTCAATGATGCACAGAAACTGTTTGGTGAAATGCCTGTGAGAAATGTGGTTGCTTGGAATACCTTGATTTATGGGCTTGTCAACCGTGGGAGTGAGAATAAACCGAATTTGTATTTGGGGTTTTATTATTTTAGGAGGATGTTGTTAGAAGCAGTTAGTCCGGATGATATAACAATTAATGGCTTGTTTCGTGCTTGCATTGAGTTAAATGGTGTTGAGATTGGTAGGCAATTGCATTGTTTTTTGGTGAAATTAGGATTTGATTCGAACTGCTTTGTGGGCAGTGCTCTTGTTGATTTTTATGCAAAATATGGTCTAGTTGAAGATGCAAGGCGTGCTTTCGATTTCTTATTGTGCAGGGATTTGGTTTTGTGGAACGTGATGGTGAATTGCTATGCTTCAAGTTCTTTGGCTGTAGGGGCTTTTAGGGTATTCAATTTGATGAGACTGGAAGGTGTTCAGGGGGATGAGTTTACATTTAGCAGTCTGCTCAGTTCATGCCGTAGTTTTGGATCTTGTGAGCCGGGAAAGCAGGTTCATGGCATTATCATTAGACAGGCTTTTGATTCAGATGTTCTAGTTTCCAGCGCACTTGTTGACATGTATGCAAAGAATGATAACATAGGTGATGCTTGGAAGGTTTTTGATGCAATGCCCATCAAGAATGTCATTTCTTGGACCACTATAATTGTGGGATATGGACTACATGGAAAAGAGAAGGAGGCTATTAAACTACTCCGGGAAATGTTGCGGGAACACTTTTATCCTGATGAATTAACTCTGGCAAGCATTGTTAGCTCATGTGGTAACATGTCATCTACTACTGAACTTATGAAAATTCATGCTTACATGGTTAAATTTGGGTTTGATTTCTTTTCATCAATTGCTAATGCTCTGATAAGTGCATACTCCAAATGTGGTAGTATTTCTAGTGCGTCTAAGTGTTTCGACTTGGTTGTTGAGCCTGATCGAGTTACTTGGACGTCCGTTATATGCGCTTATGCATTCCATGGTTTTTCCAAAGAAGCTACAGAGGTTTTTGAGAAAATGCTAACTTACGGCACAAGGCCAGACCACATTGCTTTTCTTGCGGTTCTTTCTGCATGTAGCCATGGAGGTTTGGTAAAGAAAGGGCTTCACTACTTTAGATTAATGACCGATGACTATCTGATTATTCCACATTCAGAACACTATACCTGTCTAATTGACCTTCTAGGGCGAGCTGGTCTTGTAGACGAGGCTTTCACGGCTTTGACATCGATTCCCACTGAAGCTGATCCAAGCACCTTGGGAGCATTCATAGGGGCATGTAAAGTCCATGGAAACGTAGGATTAGCAAAATGGGCTGCAGAAAAGCTTTTTGCATTGGAGCCAAACAAGCCTGTAAATTATACTCTCATGTCTAATATCTATTCTTCTGAAGGTCATTGGGATGATGTAGCAAGAGTACGCCAAATGATGAAGAACAGTTGTGATCATAAAGCTCCAGGTTGTAGCTGGGTGGAGACTGGGGGTGACATTCATACGTTTGTTTCTGGTGATGAATCCCACCCGCAAGCACCAGAGGTGTATTCCATGCTAGGGATGCTGCTCAGGCTTATGAAGGGGAAAAGTTATACGTCTGATGCGATGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:0140053 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

662

Amino Acids

73.57

Weight (kDa)

7.1

Isoelectric Point (pI)

42.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	237 - 283	9.3e-08	PPR repeat family
PPR_2	PF13041	337 - 384	2.5e-07	PPR repeat family
PPR_2	PF13041	438 - 486	8.4e-07	PPR repeat family
PPR	PF01535	441 - 470	4.3e-06	PPR repeat
E_motif	PF20431	556 - 618	2.8e-21	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004368)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46050
fragaria_vesca	FvH4_7g14820
malus_domestica	MD01G1066700.v1.1 MD11G1207600.v1.1
pyrus_communis	pycom01g09600 pycom01g22640 pycom17g24510
rosa_chinensis	RchiOBHm_Chr1g0356771 RchiOBHm_Chr1g0356781 RchiOBHm_Chr1g0375691 RchiOBHm_Chr2g0089631 RchiOBHm_Chr4g0418871
rosa_laevigata	RLG00000011901 RLG00000028084
rosa_multiflora	Rmu_co8104928.1_g000001 Rmu_co8368077.1_g000001 Rmu_sc0000517.1_g000030 Rmu_sc0000935.1_g000021 Rmu_sc0002219.1_g000014 Rmu_sc0005718.1_g000009
rosa_roxburghii	Rroxscaffold_4G00299370
rosa_rugosa	Rorug01G0251100
rosa_samantha	Rh1AG265300 Rh1AG265400 Rh1BG232700 Rh1BG232800 Rh1CG248800 Rh1CG248900 Rh1DG260300 Rh4BG214000 Rh6AG008500
rosa_wichuraiana	Rw4G018520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1334
Acc36I	ACCTGC	2 cut(s)	306, 871
AccI	GTMKAC	2 cut(s)	160, 1581
AccIII	TCCGGA	1 cut(s)	508
AciI	CCGC	6 cut(s)	16, 65, 192, 1099, 1439, 1901
AclWI	GGATC	2 cut(s)	868, 1619
AcsI	RAATTY	6 cut(s)	312, 325, 347, 454, 1185, 1205
AcuI	CTGAAG	2 cut(s)	1638, 1788
AcyI	GRCGYC	2 cut(s)	105, 1331
AfaI	GTAC	1 cut(s)	1797
AfiI	CCNNNNNNNGG	1 cut(s)	1929
AflIII	ACRYGT	3 cut(s)	271, 948, 1158
AgsI	TTSAA	7 cut(s)	27, 46, 92, 352, 671, 750, 784
AjnI	CCWGG	1 cut(s)	1834
AjuI	GAANNNNNNNTTGG	4 cut(s)	131, 163, 446, 478
AleI	CACNNNNGTG	1 cut(s)	179
AloI	GAACNNNNNNTCC	2 cut(s)	867, 899
AluBI	AGCT	7 cut(s)	1146, 1376, 1571, 1622, 1705, 1832, 1845
AluI	AGCT	7 cut(s)	1146, 1376, 1571, 1622, 1705, 1832, 1845
Alw21I	GWGCWC	1 cut(s)	637
Alw26I	GTCTC	2 cut(s)	787, 1847
AlwI	GGATC	2 cut(s)	868, 1619
AlwNI	CAGNNNCTG	2 cut(s)	307, 367
Aor13HI	TCCGGA	1 cut(s)	508
AoxI	GGCC	1 cut(s)	1415
ApeKI	GCWGC	3 cut(s)	307, 1694, 1936
ApoI	RAATTY	6 cut(s)	312, 325, 347, 454, 1185, 1205
AseI	ATTAAT	2 cut(s)	525, 1499
Asp700I	GAANNNNTTC	1 cut(s)	804
AspLEI	GCGC	2 cut(s)	938, 1346
AspS9I	GGNCC	1 cut(s)	1026
AsuC2I	CCSGG	2 cut(s)	873, 1088
AsuHPI	GGTGA	6 cut(s)	386, 607, 745, 986, 1874, 1898
AsuII	TTCGAA	1 cut(s)	614
AvaII	GGWCC	1 cut(s)	1026
Bbv12I	GWGCWC	1 cut(s)	637
BbvI	GCAGC	3 cut(s)	294, 1681, 1923
BccI	CCATC	3 cut(s)	724, 1013, 1972
BceAI	ACGGC	3 cut(s)	834, 1423, 1611
BciT130I	CCWGG	1 cut(s)	1836
BclI	TGATCA	1 cut(s)	1822
BcnI	CCSGG	2 cut(s)	873, 1088
BcoDI	GTCTC	2 cut(s)	787, 1847
BfaI	CTAG	5 cut(s)	665, 926, 1278, 1562, 1928
BfmI	CTRYAG	4 cut(s)	299, 762, 1377, 1695
BfuAI	ACCTGC	2 cut(s)	306, 871
BisI	GCNGC	4 cut(s)	16, 308, 1695, 1937
BlsI	GCNGC	4 cut(s)	17, 309, 1696, 1938
Bme1390I	CCNGG	3 cut(s)	873, 1088, 1836
Bme18I	GGWCC	1 cut(s)	1026
BmgT120I	GGNCC	1 cut(s)	1026
BmiI	GGNNCC	1 cut(s)	1719
BmrFI	CCNGG	3 cut(s)	873, 1088, 1836
BmrI	ACTGGG	1 cut(s)	1866
BmsI	GCATC	7 cut(s)	2, 346, 664, 967, 985, 1923, 1963
BmuI	ACTGGG	1 cut(s)	1866
BpmI	CTGGAG	1 cut(s)	1818
Bpu10I	CCTNAGC	1 cut(s)	1940
Bpu14I	TTCGAA	1 cut(s)	614
BpuMI	CCSGG	2 cut(s)	873, 1088
Bsa29I	ATCGAT	1 cut(s)	1607
BsaBI	GATNNNNATC	1 cut(s)	1512
BsaHI	GRCGYC	2 cut(s)	105, 1331
BsaJI	CCNNGG	6 cut(s)	265, 433, 1357, 1459, 1635, 1666
BsaWI	WCCGGW	1 cut(s)	508
BsaXI	ACNNNNNCTCC	6 cut(s)	61, 91, 191, 221, 1455, 1485
Bsc4I	CCNNNNNNNGG	1 cut(s)	1929
Bse118I	RCCGGY	1 cut(s)	178
Bse1I	ACTGG	2 cut(s)	801, 1861
Bse3DI	GCAATG	2 cut(s)	1005, 1425
Bse8I	GATNNNNATC	1 cut(s)	1512
BseAI	TCCGGA	1 cut(s)	508
BseBI	CCWGG	1 cut(s)	1836
BseCI	ATCGAT	1 cut(s)	1607
BseDI	CCNNGG	6 cut(s)	265, 433, 1357, 1459, 1635, 1666
BseGI	GGATG	5 cut(s)	492, 517, 820, 1786, 1938
BseJI	GATNNNNATC	1 cut(s)	1512
BseLI	CCNNNNNNNGG	1 cut(s)	1929
BseMI	GCAATG	2 cut(s)	1005, 1425
BseMII	CTCAG	2 cut(s)	853, 1954
BseNI	ACTGG	2 cut(s)	801, 1861
BseRI	GAGGAG	1 cut(s)	66
BseXI	GCAGC	3 cut(s)	294, 1681, 1923
BseYI	CCCAGC	1 cut(s)	1845
BsgI	GTGCAG	1 cut(s)	724
Bsh1285I	CGRYCG	1 cut(s)	53
BshFI	GGCC	1 cut(s)	1417
BshVI	ATCGAT	1 cut(s)	1607
BsiEI	CGRYCG	1 cut(s)	53
BsiHKAI	GWGCWC	1 cut(s)	637
BsiSI	CCGG	4 cut(s)	179, 509, 872, 1087
BslI	CCNNNNNNNGG	1 cut(s)	1929
BsmAI	GTCTC	2 cut(s)	787, 1847
BsmI	GAATGC	2 cut(s)	1352, 1643
BsnI	GGCC	1 cut(s)	1417
Bsp119I	TTCGAA	1 cut(s)	614
Bsp1286I	GDGCHC	1 cut(s)	637
Bsp13I	TCCGGA	1 cut(s)	508
Bsp143I	GATC	4 cut(s)	860, 1315, 1624, 1822
Bsp19I	CCATGG	4 cut(s)	265, 1357, 1459, 1666
BspACI	CCGC	6 cut(s)	16, 65, 192, 1099, 1439, 1901
BspANI	GGCC	1 cut(s)	1417
BspCNI	CTCAG	2 cut(s)	852, 1953
BspDI	ATCGAT	1 cut(s)	1607
BspEI	TCCGGA	1 cut(s)	508
BspLI	GGNNCC	1 cut(s)	1719
BspMAI	CTGCAG	2 cut(s)	303, 1699
BspMI	ACCTGC	2 cut(s)	306, 871
BspPI	GGATC	2 cut(s)	868, 1619
BspT104I	TTCGAA	1 cut(s)	614
BsrDI	GCAATG	2 cut(s)	1005, 1425
BsrFI	RCCGGY	1 cut(s)	178
BsrI	ACTGG	2 cut(s)	801, 1861
BssAI	RCCGGY	1 cut(s)	178
BssECI	CCNNGG	6 cut(s)	265, 433, 1357, 1459, 1635, 1666
BssMI	GATC	4 cut(s)	860, 1315, 1624, 1822
BssNI	GRCGYC	2 cut(s)	105, 1331
BssT1I	CCWWGG	5 cut(s)	265, 1357, 1459, 1635, 1666
Bst2UI	CCWGG	1 cut(s)	1836
Bst4CI	ACNGT	5 cut(s)	37, 54, 369, 434, 1817
BstACI	GRCGYC	2 cut(s)	105, 1331
BstAPI	GCANNNNNTGC	3 cut(s)	298, 307, 683
BstBI	TTCGAA	1 cut(s)	614
BstC8I	GCNNGC	5 cut(s)	544, 684, 1135, 1569, 1905
BstDEI	CTNAG	3 cut(s)	839, 1287, 1940
BstDSI	CCRYGG	5 cut(s)	265, 433, 1357, 1459, 1666
BstF5I	GGATG	5 cut(s)	492, 517, 820, 1786, 1938
BstHHI	GCGC	2 cut(s)	938, 1346
BstKTI	GATC	4 cut(s)	863, 1318, 1627, 1825
BstMAI	GTCTC	2 cut(s)	787, 1847
BstMBI	GATC	4 cut(s)	860, 1315, 1624, 1822
BstMCI	CGRYCG	1 cut(s)	53
BstNI	CCWGG	1 cut(s)	1836
BstNSI	RCATGY	5 cut(s)	275, 952, 1162, 1455, 1659
BstSCI	CCNGG	3 cut(s)	871, 1086, 1834
BstSFI	CTRYAG	4 cut(s)	299, 762, 1377, 1695
BstV1I	GCAGC	3 cut(s)	294, 1681, 1923
BstX2I	RGATCY	1 cut(s)	860
BstYI	RGATCY	1 cut(s)	860
Bsu15I	ATCGAT	1 cut(s)	1607
BsuRI	GGCC	1 cut(s)	1417
BsuTUI	ATCGAT	1 cut(s)	1607
BtgI	CCRYGG	5 cut(s)	265, 433, 1357, 1459, 1666
BtsCI	GGATG	5 cut(s)	492, 517, 820, 1786, 1938
BtsI	GCAGTG	2 cut(s)	172, 637
BtsIMutI	CAGTG	3 cut(s)	172, 637, 1614
BveI	ACCTGC	2 cut(s)	306, 871
Cac8I	GCNNGC	5 cut(s)	544, 684, 1135, 1569, 1905
CaiI	CAGNNNCTG	2 cut(s)	307, 367
CfoI	GCGC	2 cut(s)	938, 1346
Cfr10I	RCCGGY	1 cut(s)	178
Cfr13I	GGNCC	1 cut(s)	1026
ClaI	ATCGAT	1 cut(s)	1607
CseI	GACGC	3 cut(s)	113, 171, 1272
Csp6I	GTAC	1 cut(s)	1796
CspCI	CAANNNNNGTGG	2 cut(s)	1018, 1053
CviQI	GTAC	1 cut(s)	1796
DdeI	CTNAG	3 cut(s)	839, 1287, 1940
DpnI	GATC	4 cut(s)	862, 1317, 1626, 1824
DpnII	GATC	4 cut(s)	860, 1315, 1624, 1822
EciI	GGCGGA	1 cut(s)	181
Eco130I	CCWWGG	5 cut(s)	265, 1357, 1459, 1635, 1666
Eco47I	GGWCC	1 cut(s)	1026
Eco57I	CTGAAG	2 cut(s)	1638, 1788
EcoRI	GAATTC	1 cut(s)	347
EcoRII	CCWGG	1 cut(s)	1834
EcoT14I	CCWWGG	5 cut(s)	265, 1357, 1459, 1635, 1666
EcoT22I	ATGCAT	1 cut(s)	1354
ErhI	CCWWGG	5 cut(s)	265, 1357, 1459, 1635, 1666
FalI	AAGNNNNNCTT	2 cut(s)	670, 702
FauI	CCCGC	3 cut(s)	72, 1092, 1908
FbaI	TGATCA	1 cut(s)	1822
FblI	GTMKAC	2 cut(s)	160, 1581
Fnu4HI	GCNGC	4 cut(s)	16, 308, 1695, 1937
FokI	GGATG	5 cut(s)	499, 524, 827, 1793, 1945
Fsp4HI	GCNGC	4 cut(s)	16, 308, 1695, 1937
FspBI	CTAG	5 cut(s)	665, 926, 1278, 1562, 1928
GlaI	GCGC	2 cut(s)	937, 1345
GluI	GCNGC	4 cut(s)	16, 308, 1695, 1937
GsaI	CCCAGC	1 cut(s)	1849
GsuI	CTGGAG	1 cut(s)	1818
HaeIII	GGCC	1 cut(s)	1417
HapII	CCGG	4 cut(s)	179, 509, 872, 1087
HgaI	GACGC	3 cut(s)	113, 171, 1272
HhaI	GCGC	2 cut(s)	938, 1346
Hin1I	GRCGYC	2 cut(s)	105, 1331
Hin6I	GCGC	2 cut(s)	936, 1344
HinP1I	GCGC	2 cut(s)	936, 1344
HincII	GTYRAC	3 cut(s)	161, 430, 946
HindII	GTYRAC	3 cut(s)	161, 430, 946
HindIII	AAGCTT	1 cut(s)	1703
HinfI	GANTC	6 cut(s)	157, 188, 611, 914, 1609, 1892
HpaII	CCGG	4 cut(s)	179, 509, 872, 1087
HphI	GGTGA	6 cut(s)	386, 607, 745, 986, 1874, 1898
Hpy166II	GTNNAC	6 cut(s)	40, 161, 430, 822, 946, 1582
Hpy188I	TCNGA	7 cut(s)	156, 919, 1245, 1518, 1534, 1768, 1972
Hpy188III	TCNNGA	5 cut(s)	9, 322, 509, 1009, 1115
Hpy8I	GTNNAC	6 cut(s)	40, 161, 430, 822, 946, 1582
Hpy99I	CGWCG	1 cut(s)	165
HpyAV	CCTTC	7 cut(s)	181, 794, 979, 1060, 1568, 1763, 1945
HpyCH4III	ACNGT	5 cut(s)	37, 54, 369, 434, 1817
HpyCH4IV	ACGT	7 cut(s)	58, 333, 726, 1331, 1674, 1874, 1967
HpyF3I	CTNAG	3 cut(s)	839, 1287, 1940
HpySE526I	ACGT	7 cut(s)	58, 333, 726, 1331, 1674, 1874, 1967
Hsp92I	GRCGYC	2 cut(s)	105, 1331
HspAI	GCGC	2 cut(s)	936, 1344
Kpn2I	TCCGGA	1 cut(s)	508
Ksp22I	TGATCA	1 cut(s)	1822
Kzo9I	GATC	4 cut(s)	860, 1315, 1624, 1822
LmnI	GCTCC	4 cut(s)	212, 1640, 1717, 1837
Lsp1109I	GCAGC	3 cut(s)	294, 1681, 1923
LweI	GCATC	7 cut(s)	2, 346, 664, 967, 985, 1923, 1963
MaeI	CTAG	5 cut(s)	665, 926, 1278, 1562, 1928
MaeII	ACGT	7 cut(s)	58, 333, 726, 1331, 1674, 1874, 1967
MaeIII	GTNAC	4 cut(s)	54, 1154, 1321, 1862
MalI	GATC	4 cut(s)	862, 1317, 1626, 1824
MboI	GATC	4 cut(s)	860, 1315, 1624, 1822
MboII	GAAGA	4 cut(s)	15, 683, 1755, 1822
MfeI	CAATTG	2 cut(s)	578, 1230
MflI	RGATCY	1 cut(s)	860
MhlI	GDGCHC	1 cut(s)	637
MlyI	GAGTC	1 cut(s)	166
MmeI	TCCRAC	1 cut(s)	234
Mph1103I	ATGCAT	1 cut(s)	1354
MroI	TCCGGA	1 cut(s)	508
MroXI	GAANNNNTTC	1 cut(s)	804
MseI	TTAA	6 cut(s)	525, 554, 1077, 1124, 1203, 1499
MslI	CAYNNNNRTG	3 cut(s)	179, 270, 1779
MspI	CCGG	4 cut(s)	179, 509, 872, 1087
MspR9I	CCNGG	3 cut(s)	873, 1088, 1836
MunI	CAATTG	2 cut(s)	578, 1230
Mva1269I	GAATGC	2 cut(s)	1352, 1643
MvaI	CCWGG	1 cut(s)	1836
NciI	CCSGG	2 cut(s)	873, 1088
NcoI	CCATGG	4 cut(s)	265, 1357, 1459, 1666
NdeII	GATC	4 cut(s)	860, 1315, 1624, 1822
NlaIV	GGNNCC	1 cut(s)	1719
NmuCI	GTSAC	1 cut(s)	1862
NsiI	ATGCAT	1 cut(s)	1354
NspI	RCATGY	5 cut(s)	275, 952, 1162, 1455, 1659
NspV	TTCGAA	1 cut(s)	614
OliI	CACNNNNGTG	1 cut(s)	179
PciI	ACATGT	3 cut(s)	271, 948, 1158
PcsI	WCGNNNNNNNCGW	2 cut(s)	55, 1973
PctI	GAATGC	2 cut(s)	1352, 1643
PdmI	GAANNNNTTC	1 cut(s)	804
PfeI	GAWTC	5 cut(s)	188, 611, 914, 1609, 1892
PfoI	TCCNGGA	1 cut(s)	1086
PkrI	GCNGC	4 cut(s)	17, 309, 1696, 1938
PleI	GAGTC	1 cut(s)	165
PpsI	GAGTC	1 cut(s)	165
PscI	ACATGT	3 cut(s)	271, 948, 1158
PshBI	ATTAAT	2 cut(s)	525, 1499
Psp6I	CCWGG	1 cut(s)	1834
PspFI	CCCAGC	1 cut(s)	1845
PspGI	CCWGG	1 cut(s)	1834
PspN4I	GGNNCC	1 cut(s)	1719
PspPI	GGNCC	1 cut(s)	1026
PstI	CTGCAG	2 cut(s)	303, 1699
PstNI	CAGNNNCTG	2 cut(s)	307, 367
PsuI	RGATCY	1 cut(s)	860
RsaI	GTAC	1 cut(s)	1797
RsaNI	GTAC	1 cut(s)	1796
RseI	CAYNNNNRTG	3 cut(s)	179, 270, 1779
SalI	GTCGAC	1 cut(s)	159
SaqAI	TTAA	6 cut(s)	525, 554, 1077, 1124, 1203, 1499
SatI	GCNGC	4 cut(s)	16, 308, 1695, 1937
Sau3AI	GATC	4 cut(s)	860, 1315, 1624, 1822
Sau96I	GGNCC	1 cut(s)	1026
SchI	GAGTC	1 cut(s)	166
ScrFI	CCNGG	3 cut(s)	873, 1088, 1836
SduI	GDGCHC	1 cut(s)	637
SfaNI	GCATC	7 cut(s)	2, 346, 664, 967, 985, 1923, 1963
SfcI	CTRYAG	4 cut(s)	299, 762, 1377, 1695
SfuI	TTCGAA	1 cut(s)	614
SgrAI	CRCCGGYG	1 cut(s)	178
SinI	GGWCC	1 cut(s)	1026
SmiMI	CAYNNNNRTG	3 cut(s)	179, 270, 1779
SsiI	CCGC	6 cut(s)	16, 65, 192, 1099, 1439, 1901
SspMI	CTAG	5 cut(s)	665, 926, 1278, 1562, 1928
StyD4I	CCNGG	3 cut(s)	871, 1086, 1834
StyI	CCWWGG	5 cut(s)	265, 1357, 1459, 1635, 1666
TaaI	ACNGT	5 cut(s)	37, 54, 369, 434, 1817
TaiI	ACGT	7 cut(s)	61, 336, 729, 1334, 1677, 1877, 1970
TaqI	TCGA	7 cut(s)	160, 186, 614, 690, 1296, 1318, 1607
TaqII	GACCGA	1 cut(s)	1520
TauI	GCSGC	1 cut(s)	18
TfiI	GAWTC	5 cut(s)	188, 611, 914, 1609, 1892
Tru1I	TTAA	6 cut(s)	525, 554, 1077, 1124, 1203, 1499
Tru9I	TTAA	6 cut(s)	525, 554, 1077, 1124, 1203, 1499
TscAI	CASTG	3 cut(s)	172, 637, 1621
TseFI	GTSAC	1 cut(s)	1862
TseI	GCWGC	3 cut(s)	307, 1694, 1936
Tsp45I	GTSAC	1 cut(s)	1862
TspGWI	ACGGA	1 cut(s)	1324
TspRI	CASTG	3 cut(s)	172, 637, 1621
VpaK11BI	GGWCC	1 cut(s)	1026
VspI	ATTAAT	2 cut(s)	525, 1499
XapI	RAATTY	6 cut(s)	312, 325, 347, 454, 1185, 1205
XceI	RCATGY	5 cut(s)	275, 952, 1162, 1455, 1659
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1036, 1842
XmiI	GTMKAC	2 cut(s)	160, 1581
XmnI	GAANNNNTTC	1 cut(s)	804
XspI	CTAG	5 cut(s)	665, 926, 1278, 1562, 1928
ZraI	GACGTC	1 cut(s)	1332
Zsp2I	ATGCAT	1 cut(s)	1354

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.