Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0004368

Physical Location & Seq

Genomic Coordinates Forward (+)

17038179 .. 17040255

Gene Structure 2077 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1066700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGCTCTCCAGATGCCGCTCATCTTCAATCCCCACCGTCCACTTCAAACGACCGTTACGTTTCCCGCCAACCCCTCCTCCTGCTTCGTTTCAAACCAATACAGACGCCCCAAATCATGCTCACCCATTTCATCAAACCAACTCGTCTTTCCCTCCGAGTCCACGCAGTGCCTTCACGCCGGTACTCGAATCCGCCCATTCCTTCTGCTCAAACGCCCTCAAAGTTTCAGCCAAAATGGGTTTTCTTCCCGAGGGAAAACAATTCCATGGACATGTGGTAAAGTTGGGTTTGCATAACCTGCAGTCGCTGCAAATTCATGTCCTGAATCTATACGTCAAGTGCAAGGAATTCAATGATGCACAGAAGCTGTTTGGTGAAATGCCTGTGAGAAATGTGGTTGCTTGGAATACCTTGATTTATGGGCTTGTCAACTGTGGGAGTGAGGATTTGGTTTTGTGGAACGTGATGGTGAATTGCTATGCTTCAAGTTCTTTGGCTGTAGGGGCTTTTAGGGTATTCAATTTGATGAGACTGGAAGGTGTTCAGGGGGATCAGTTTACATTTAGCAGTCTGCTCAGTTCATGCCGTAGATTTGGATCTTGTGAGCCGGGAAGGCAGGTTCATGGCATTATCATTAGACAGGCTTTTGATTCAGATGTTCTAGTTTCCAGCGCACTTGTTGACATGTATGCAAAGAATGATAGCATAGGTGATGCTTGGAAGGTTTTTGATGCAATGCCCATCAAGAATGTCATTTCTTGGACCACTATAATTGTGGGATATGGACTACATGGAAAAGAGAAGGAGGCTATTAAACTACTCCGGGAAATGTTGCAGGAACACTTTTATCCTGATGAATTAACTCTGGCAAGCATTGTTAGCTCATGTGGTAATGTGTCATCTACTACTGAACTTATGAAAATTCATGCTTACATGGTTAAATTTGGGTTTGATTTCTTTTCATCAATTGCTAATGCTCTGATAAGTGCATACTCCAAATGTGGTAGTATGTCTAGTGCGTCTAAGTGTTTCAACTTGGTTGTTGAGCCCGATCAAGTTACTTGGACGTCAGTTATATGCGCATATGCATTCCATGGTCTTTCCAAAGAAGCTACAGAGGTTTTTGAGAAAATGCTAACTTACGGTACAAGGCCAGACCACATTGCTTTTCTTGCGGTTCTTTCTGCATGTAGCCATGGAGGGTTGGTAAAGAAAGGGCTTCACTACTTTAGATTAATGACCAATGACTATCAGATTATTCCAGATTCAGAACACTATACCTGTCTAATTGACCTTCTAGGGCGAGCTGGTCTTGTAGAAGAGGCTTTCACGGCTTTGACATCGATTCCCACCGAAGCTGATCCAAGCACCTTGGGAGCATTCATAGGGGCATGTAAAGTCCATGGAAACGTAGGATTAGCAAAATGGGCTGCAGAAAAGCTTTTTGCATTGGAGCCAAACAAGCCTGTAAATTATACTCTCATGTCTAACATCTATTCTTCTGAAGGTCATTGGGATGATGTAGCAAGAGTACGCCAAATGATGAAGAACAGTTGTGATCATAAAGCTCCAGGTTGTAGCTGGGTGGAGACTGGGGGTGACATTCATACATTTGTTTCTGGTGATGAATCCCACCCGCAAGCACCAGAGGTGTATTCCATGCTAGGGATGCTGCTCAGGTTTATGAAGGAGAAAAGTTATACGTCTGATGCGATGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:0140053 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

574

Amino Acids

63.33

Weight (kDa)

6.76

Isoelectric Point (pI)

43.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	149 - 195	1.5e-07	PPR repeat family
PPR_2	PF13041	249 - 296	3.4e-07	PPR repeat family
PPR_2	PF13041	350 - 398	4.9e-08	PPR repeat family
PPR	PF01535	353 - 382	2.3e-06	PPR repeat
E_motif	PF20431	468 - 530	2.3e-21	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004368)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46050
fragaria_vesca	FvH4_7g14820
malus_domestica	MD01G1066700.v1.1 MD11G1207600.v1.1
pyrus_communis	pycom01g09600 pycom01g22640 pycom17g24510
rosa_chinensis	RchiOBHm_Chr1g0356771 RchiOBHm_Chr1g0356781 RchiOBHm_Chr1g0375691 RchiOBHm_Chr2g0089631 RchiOBHm_Chr4g0418871
rosa_laevigata	RLG00000011901 RLG00000028084
rosa_multiflora	Rmu_co8104928.1_g000001 Rmu_co8368077.1_g000001 Rmu_sc0000517.1_g000030 Rmu_sc0000935.1_g000021 Rmu_sc0002219.1_g000014 Rmu_sc0005718.1_g000009
rosa_roxburghii	Rroxscaffold_4G00299370
rosa_rugosa	Rorug01G0251100
rosa_samantha	Rh1AG265300 Rh1AG265400 Rh1BG232700 Rh1BG232800 Rh1CG248800 Rh1CG248900 Rh1DG260300 Rh4BG214000 Rh6AG008500
rosa_wichuraiana	Rw4G018520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1070
Acc16I	TGCGCA	1 cut(s)	1081
Acc36I	ACCTGC	2 cut(s)	306, 607
AccBSI	CCGCTC	1 cut(s)	18
AciI	CCGC	5 cut(s)	16, 65, 192, 1175, 1637
AclWI	GGATC	3 cut(s)	558, 604, 1355
AcsI	RAATTY	4 cut(s)	312, 347, 921, 941
AcuI	CTGAAG	1 cut(s)	1524
AcyI	GRCGYC	2 cut(s)	105, 1067
AdeI	CACNNNGTG	1 cut(s)	167
AfaI	GTAC	3 cut(s)	183, 1147, 1533
AfiI	CCNNNNNNNGG	1 cut(s)	1665
AflIII	ACRYGT	2 cut(s)	271, 684
AgsI	TTSAA	7 cut(s)	27, 46, 92, 352, 486, 520, 1033
AjnI	CCWGG	1 cut(s)	1570
AjuI	GAANNNNNNNTTGG	2 cut(s)	131, 163
AloI	GAACNNNNNNTCC	2 cut(s)	603, 635
AluBI	AGCT	8 cut(s)	367, 882, 1112, 1307, 1358, 1441, 1568, 1581
AluI	AGCT	8 cut(s)	367, 882, 1112, 1307, 1358, 1441, 1568, 1581
Alw26I	GTCTC	2 cut(s)	523, 1583
AlwI	GGATC	3 cut(s)	558, 604, 1355
AlwNI	CAGNNNCTG	2 cut(s)	307, 367
Ama87I	CYCGRG	1 cut(s)	248
AoxI	GGCC	1 cut(s)	1151
ApeKI	GCWGC	3 cut(s)	307, 1430, 1672
ApoI	RAATTY	4 cut(s)	312, 347, 921, 941
AseI	ATTAAT	1 cut(s)	1235
Asp700I	GAANNNNTTC	1 cut(s)	540
AspLEI	GCGC	2 cut(s)	674, 1082
AspS9I	GGNCC	1 cut(s)	762
AsuC2I	CCSGG	2 cut(s)	609, 824
AsuHPI	GGTGA	6 cut(s)	113, 386, 481, 722, 1610, 1634
AvaI	CYCGRG	1 cut(s)	248
AvaII	GGWCC	1 cut(s)	762
BanII	GRGCYC	1 cut(s)	1050
BbvI	GCAGC	3 cut(s)	294, 1417, 1659
BccI	CCATC	3 cut(s)	460, 749, 1708
BceAI	ACGGC	2 cut(s)	570, 1347
BciT130I	CCWGG	1 cut(s)	1572
BclI	TGATCA	1 cut(s)	1558
BcnI	CCSGG	2 cut(s)	609, 824
BcoDI	GTCTC	2 cut(s)	523, 1583
BfaI	CTAG	4 cut(s)	662, 1014, 1298, 1664
BfmI	CTRYAG	4 cut(s)	299, 498, 1113, 1431
BfuAI	ACCTGC	2 cut(s)	306, 607
BglI	GCCNNNNNGGC	1 cut(s)	613
BisI	GCNGC	4 cut(s)	16, 308, 1431, 1673
BlsI	GCNGC	4 cut(s)	17, 309, 1432, 1674
Bme1390I	CCNGG	3 cut(s)	609, 824, 1572
Bme18I	GGWCC	1 cut(s)	762
BmeT110I	CYCGRG	1 cut(s)	248
BmgT120I	GGNCC	1 cut(s)	762
BmiI	GGNNCC	1 cut(s)	1455
BmrFI	CCNGG	3 cut(s)	609, 824, 1572
BmrI	ACTGGG	1 cut(s)	1602
BmsI	GCATC	6 cut(s)	2, 346, 703, 721, 1659, 1699
BmuI	ACTGGG	1 cut(s)	1602
BpmI	CTGGAG	1 cut(s)	1554
Bpu10I	CCTNAGC	1 cut(s)	1676
BpuMI	CCSGG	2 cut(s)	609, 824
Bsa29I	ATCGAT	1 cut(s)	1343
BsaBI	GATNNNNATC	1 cut(s)	595
BsaHI	GRCGYC	2 cut(s)	105, 1067
BsaJI	CCNNGG	6 cut(s)	249, 265, 1093, 1195, 1371, 1402
BsaXI	ACNNNNNCTCC	4 cut(s)	61, 91, 1191, 1221
Bsc4I	CCNNNNNNNGG	1 cut(s)	1665
Bse118I	RCCGGY	1 cut(s)	178
Bse1I	ACTGG	2 cut(s)	537, 1597
Bse3DI	GCAATG	2 cut(s)	741, 1161
Bse8I	GATNNNNATC	1 cut(s)	595
BseBI	CCWGG	1 cut(s)	1572
BseCI	ATCGAT	1 cut(s)	1343
BseDI	CCNNGG	6 cut(s)	249, 265, 1093, 1195, 1371, 1402
BseGI	GGATG	2 cut(s)	1522, 1674
BseJI	GATNNNNATC	1 cut(s)	595
BseLI	CCNNNNNNNGG	1 cut(s)	1665
BseMI	GCAATG	2 cut(s)	741, 1161
BseMII	CTCAG	2 cut(s)	589, 1690
BseNI	ACTGG	2 cut(s)	537, 1597
BseRI	GAGGAG	1 cut(s)	66
BseXI	GCAGC	3 cut(s)	294, 1417, 1659
BseYI	CCCAGC	1 cut(s)	1581
Bsh1285I	CGRYCG	1 cut(s)	53
BshFI	GGCC	1 cut(s)	1153
BshVI	ATCGAT	1 cut(s)	1343
BsiEI	CGRYCG	1 cut(s)	53
BsiHKCI	CYCGRG	1 cut(s)	248
BsiSI	CCGG	3 cut(s)	179, 608, 823
BslI	CCNNNNNNNGG	1 cut(s)	1665
BsmAI	GTCTC	2 cut(s)	523, 1583
BsmI	GAATGC	2 cut(s)	1088, 1379
BsnI	GGCC	1 cut(s)	1153
BsoBI	CYCGRG	1 cut(s)	248
Bsp1286I	GDGCHC	1 cut(s)	1050
Bsp143I	GATC	5 cut(s)	550, 596, 1051, 1360, 1558
Bsp19I	CCATGG	4 cut(s)	265, 1093, 1195, 1402
BspACI	CCGC	5 cut(s)	16, 65, 192, 1175, 1637
BspANI	GGCC	1 cut(s)	1153
BspCNI	CTCAG	2 cut(s)	588, 1689
BspDI	ATCGAT	1 cut(s)	1343
BspLI	GGNNCC	1 cut(s)	1455
BspMAI	CTGCAG	2 cut(s)	303, 1435
BspMI	ACCTGC	2 cut(s)	306, 607
BspPI	GGATC	3 cut(s)	558, 604, 1355
BsrBI	CCGCTC	1 cut(s)	18
BsrDI	GCAATG	2 cut(s)	741, 1161
BsrFI	RCCGGY	1 cut(s)	178
BsrI	ACTGG	2 cut(s)	537, 1597
BssAI	RCCGGY	1 cut(s)	178
BssECI	CCNNGG	6 cut(s)	249, 265, 1093, 1195, 1371, 1402
BssMI	GATC	5 cut(s)	550, 596, 1051, 1360, 1558
BssNI	GRCGYC	2 cut(s)	105, 1067
BssT1I	CCWWGG	5 cut(s)	265, 1093, 1195, 1371, 1402
Bst2UI	CCWGG	1 cut(s)	1572
Bst4CI	ACNGT	5 cut(s)	37, 54, 434, 1145, 1553
Bst6I	CTCTTC	1 cut(s)	1314
BstACI	GRCGYC	2 cut(s)	105, 1067
BstAPI	GCANNNNNTGC	2 cut(s)	298, 307
BstC8I	GCNNGC	3 cut(s)	871, 1305, 1641
BstDEI	CTNAG	3 cut(s)	575, 1023, 1676
BstDSI	CCRYGG	4 cut(s)	265, 1093, 1195, 1402
BstF5I	GGATG	2 cut(s)	1522, 1674
BstHHI	GCGC	2 cut(s)	674, 1082
BstKTI	GATC	5 cut(s)	553, 599, 1054, 1363, 1561
BstMAI	GTCTC	2 cut(s)	523, 1583
BstMBI	GATC	5 cut(s)	550, 596, 1051, 1360, 1558
BstMCI	CGRYCG	1 cut(s)	53
BstNI	CCWGG	1 cut(s)	1572
BstNSI	RCATGY	4 cut(s)	275, 688, 1191, 1395
BstSCI	CCNGG	3 cut(s)	607, 822, 1570
BstSFI	CTRYAG	4 cut(s)	299, 498, 1113, 1431
BstV1I	GCAGC	3 cut(s)	294, 1417, 1659
BstX2I	RGATCY	1 cut(s)	596
BstYI	RGATCY	1 cut(s)	596
Bsu15I	ATCGAT	1 cut(s)	1343
BsuRI	GGCC	1 cut(s)	1153
BsuTUI	ATCGAT	1 cut(s)	1343
BtgI	CCRYGG	4 cut(s)	265, 1093, 1195, 1402
BtsCI	GGATG	2 cut(s)	1522, 1674
BtsI	GCAGTG	1 cut(s)	172
BtsIMutI	CAGTG	1 cut(s)	172
BveI	ACCTGC	2 cut(s)	306, 607
Cac8I	GCNNGC	3 cut(s)	871, 1305, 1641
CaiI	CAGNNNCTG	2 cut(s)	307, 367
CfoI	GCGC	2 cut(s)	674, 1082
Cfr10I	RCCGGY	1 cut(s)	178
Cfr13I	GGNCC	1 cut(s)	762
ClaI	ATCGAT	1 cut(s)	1343
CseI	GACGC	2 cut(s)	113, 1008
Csp6I	GTAC	3 cut(s)	182, 1146, 1532
CspCI	CAANNNNNGTGG	2 cut(s)	754, 789
CviQI	GTAC	3 cut(s)	182, 1146, 1532
DdeI	CTNAG	3 cut(s)	575, 1023, 1676
DpnI	GATC	5 cut(s)	552, 598, 1053, 1362, 1560
DpnII	GATC	5 cut(s)	550, 596, 1051, 1360, 1558
DraIII	CACNNNGTG	1 cut(s)	167
Eam1104I	CTCTTC	1 cut(s)	1314
EarI	CTCTTC	1 cut(s)	1314
EciI	GGCGGA	1 cut(s)	181
Eco130I	CCWWGG	5 cut(s)	265, 1093, 1195, 1371, 1402
Eco24I	GRGCYC	1 cut(s)	1050
Eco47I	GGWCC	1 cut(s)	762
Eco57I	CTGAAG	1 cut(s)	1524
Eco88I	CYCGRG	1 cut(s)	248
EcoRI	GAATTC	1 cut(s)	347
EcoRII	CCWGG	1 cut(s)	1570
EcoT14I	CCWWGG	5 cut(s)	265, 1093, 1195, 1371, 1402
EcoT22I	ATGCAT	1 cut(s)	1090
EcoT38I	GRGCYC	1 cut(s)	1050
ErhI	CCWWGG	5 cut(s)	265, 1093, 1195, 1371, 1402
FauI	CCCGC	2 cut(s)	72, 1644
FauNDI	CATATG	1 cut(s)	1084
FbaI	TGATCA	1 cut(s)	1558
Fnu4HI	GCNGC	4 cut(s)	16, 308, 1431, 1673
FokI	GGATG	2 cut(s)	1529, 1681
FriOI	GRGCYC	1 cut(s)	1050
Fsp4HI	GCNGC	4 cut(s)	16, 308, 1431, 1673
FspAI	RTGCGCAY	1 cut(s)	1081
FspBI	CTAG	4 cut(s)	662, 1014, 1298, 1664
FspI	TGCGCA	1 cut(s)	1081
GlaI	GCGC	2 cut(s)	673, 1081
GluI	GCNGC	4 cut(s)	16, 308, 1431, 1673
GsaI	CCCAGC	1 cut(s)	1585
GsuI	CTGGAG	1 cut(s)	1554
HaeIII	GGCC	1 cut(s)	1153
HapII	CCGG	3 cut(s)	179, 608, 823
HgaI	GACGC	2 cut(s)	113, 1008
HhaI	GCGC	2 cut(s)	674, 1082
Hin1I	GRCGYC	2 cut(s)	105, 1067
Hin6I	GCGC	2 cut(s)	672, 1080
HinP1I	GCGC	2 cut(s)	672, 1080
HincII	GTYRAC	2 cut(s)	430, 682
HindII	GTYRAC	2 cut(s)	430, 682
HindIII	AAGCTT	1 cut(s)	1439
HinfI	GANTC	7 cut(s)	157, 188, 325, 650, 1265, 1345, 1628
HpaII	CCGG	3 cut(s)	179, 608, 823
HphI	GGTGA	6 cut(s)	113, 386, 481, 722, 1610, 1634
Hpy166II	GTNNAC	5 cut(s)	40, 161, 430, 558, 682
Hpy188I	TCNGA	7 cut(s)	156, 655, 981, 1254, 1270, 1504, 1708
Hpy188III	TCNNGA	6 cut(s)	9, 248, 322, 745, 851, 1262
Hpy8I	GTNNAC	5 cut(s)	40, 161, 430, 558, 682
HpyAV	CCTTC	9 cut(s)	181, 211, 530, 606, 715, 796, 1304, 1499, 1681
HpyCH4III	ACNGT	5 cut(s)	37, 54, 434, 1145, 1553
HpyCH4IV	ACGT	6 cut(s)	58, 333, 462, 1067, 1410, 1703
HpyF3I	CTNAG	3 cut(s)	575, 1023, 1676
HpySE526I	ACGT	6 cut(s)	58, 333, 462, 1067, 1410, 1703
Hsp92I	GRCGYC	2 cut(s)	105, 1067
HspAI	GCGC	2 cut(s)	672, 1080
Ksp22I	TGATCA	1 cut(s)	1558
Kzo9I	GATC	5 cut(s)	550, 596, 1051, 1360, 1558
LmnI	GCTCC	3 cut(s)	1376, 1453, 1573
Lsp1109I	GCAGC	3 cut(s)	294, 1417, 1659
LweI	GCATC	6 cut(s)	2, 346, 703, 721, 1659, 1699
MaeI	CTAG	4 cut(s)	662, 1014, 1298, 1664
MaeII	ACGT	6 cut(s)	58, 333, 462, 1067, 1410, 1703
MaeIII	GTNAC	3 cut(s)	54, 1057, 1598
MalI	GATC	5 cut(s)	552, 598, 1053, 1362, 1560
MbiI	CCGCTC	1 cut(s)	18
MboI	GATC	5 cut(s)	550, 596, 1051, 1360, 1558
MboII	GAAGA	5 cut(s)	15, 236, 1331, 1491, 1558
MfeI	CAATTG	1 cut(s)	966
MflI	RGATCY	1 cut(s)	596
MhlI	GDGCHC	1 cut(s)	1050
MlyI	GAGTC	1 cut(s)	166
Mph1103I	ATGCAT	1 cut(s)	1090
MroXI	GAANNNNTTC	1 cut(s)	540
MseI	TTAA	4 cut(s)	813, 860, 939, 1235
MslI	CAYNNNNRTG	2 cut(s)	270, 1515
MspI	CCGG	3 cut(s)	179, 608, 823
MspR9I	CCNGG	3 cut(s)	609, 824, 1572
MunI	CAATTG	1 cut(s)	966
Mva1269I	GAATGC	2 cut(s)	1088, 1379
MvaI	CCWGG	1 cut(s)	1572
NciI	CCSGG	2 cut(s)	609, 824
NcoI	CCATGG	4 cut(s)	265, 1093, 1195, 1402
NdeI	CATATG	1 cut(s)	1084
NdeII	GATC	5 cut(s)	550, 596, 1051, 1360, 1558
NlaIV	GGNNCC	1 cut(s)	1455
NmuCI	GTSAC	1 cut(s)	1598
NsbI	TGCGCA	1 cut(s)	1081
NsiI	ATGCAT	1 cut(s)	1090
NspI	RCATGY	4 cut(s)	275, 688, 1191, 1395
PciI	ACATGT	2 cut(s)	271, 684
PcsI	WCGNNNNNNNCGW	2 cut(s)	55, 1709
PctI	GAATGC	2 cut(s)	1088, 1379
PdmI	GAANNNNTTC	1 cut(s)	540
PfeI	GAWTC	6 cut(s)	188, 325, 650, 1265, 1345, 1628
PfoI	TCCNGGA	1 cut(s)	822
PkrI	GCNGC	4 cut(s)	17, 309, 1432, 1674
PleI	GAGTC	1 cut(s)	165
PpsI	GAGTC	1 cut(s)	165
PscI	ACATGT	2 cut(s)	271, 684
PshBI	ATTAAT	1 cut(s)	1235
Psp6I	CCWGG	1 cut(s)	1570
PspFI	CCCAGC	1 cut(s)	1581
PspGI	CCWGG	1 cut(s)	1570
PspN4I	GGNNCC	1 cut(s)	1455
PspPI	GGNCC	1 cut(s)	762
PstI	CTGCAG	2 cut(s)	303, 1435
PstNI	CAGNNNCTG	2 cut(s)	307, 367
PsuI	RGATCY	1 cut(s)	596
RsaI	GTAC	3 cut(s)	183, 1147, 1533
RsaNI	GTAC	3 cut(s)	182, 1146, 1532
RseI	CAYNNNNRTG	2 cut(s)	270, 1515
SaqAI	TTAA	4 cut(s)	813, 860, 939, 1235
SatI	GCNGC	4 cut(s)	16, 308, 1431, 1673
Sau3AI	GATC	5 cut(s)	550, 596, 1051, 1360, 1558
Sau96I	GGNCC	1 cut(s)	762
SchI	GAGTC	1 cut(s)	166
ScrFI	CCNGG	3 cut(s)	609, 824, 1572
SduI	GDGCHC	1 cut(s)	1050
SfaNI	GCATC	6 cut(s)	2, 346, 703, 721, 1659, 1699
SfcI	CTRYAG	4 cut(s)	299, 498, 1113, 1431
SinI	GGWCC	1 cut(s)	762
SmiMI	CAYNNNNRTG	2 cut(s)	270, 1515
SsiI	CCGC	5 cut(s)	16, 65, 192, 1175, 1637
SspMI	CTAG	4 cut(s)	662, 1014, 1298, 1664
StyD4I	CCNGG	3 cut(s)	607, 822, 1570
StyI	CCWWGG	5 cut(s)	265, 1093, 1195, 1371, 1402
TaaI	ACNGT	5 cut(s)	37, 54, 434, 1145, 1553
TaiI	ACGT	6 cut(s)	61, 336, 465, 1070, 1413, 1706
TaqI	TCGA	2 cut(s)	186, 1343
TauI	GCSGC	1 cut(s)	18
TfiI	GAWTC	6 cut(s)	188, 325, 650, 1265, 1345, 1628
Tru1I	TTAA	4 cut(s)	813, 860, 939, 1235
Tru9I	TTAA	4 cut(s)	813, 860, 939, 1235
TscAI	CASTG	1 cut(s)	172
TseFI	GTSAC	1 cut(s)	1598
TseI	GCWGC	3 cut(s)	307, 1430, 1672
Tsp45I	GTSAC	1 cut(s)	1598
TspRI	CASTG	1 cut(s)	172
VpaK11BI	GGWCC	1 cut(s)	762
VspI	ATTAAT	1 cut(s)	1235
XapI	RAATTY	4 cut(s)	312, 347, 921, 941
XceI	RCATGY	4 cut(s)	275, 688, 1191, 1395
XcmI	CCANNNNNNNNNTGG	2 cut(s)	772, 1578
XmnI	GAANNNNTTC	1 cut(s)	540
XspI	CTAG	4 cut(s)	662, 1014, 1298, 1664
ZraI	GACGTC	1 cut(s)	1068
Zsp2I	ATGCAT	1 cut(s)	1090

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.