Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46050 |
| fragaria_vesca | FvH4_7g14820 |
| malus_domestica | MD01G1066700.v1.1 MD11G1207600.v1.1 |
| pyrus_communis | pycom01g09600 pycom01g22640 pycom17g24510 |
| rosa_chinensis | RchiOBHm_Chr1g0356771 RchiOBHm_Chr1g0356781 RchiOBHm_Chr1g0375691 RchiOBHm_Chr2g0089631 RchiOBHm_Chr4g0418871 |
| rosa_laevigata | RLG00000011901 RLG00000028084 |
| rosa_multiflora | Rmu_co8104928.1_g000001 Rmu_co8368077.1_g000001 Rmu_sc0000517.1_g000030 Rmu_sc0000935.1_g000021 Rmu_sc0002219.1_g000014 Rmu_sc0005718.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00299370 |
| rosa_rugosa | Rorug01G0251100 |
| rosa_samantha | Rh1AG265300 Rh1AG265400 Rh1BG232700 Rh1BG232800 Rh1CG248800 Rh1CG248900 Rh1DG260300 Rh4BG214000 Rh6AG008500 |
| rosa_wichuraiana | Rw4G018520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 274 |
| AcsI | RAATTY | 1 cut(s) | 22 |
| AfaI | GTAC | 1 cut(s) | 348 |
| AflIII | ACRYGT | 1 cut(s) | 135 |
| AgsI | TTSAA | 3 cut(s) | 21, 55, 257 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 27, 59 |
| AluBI | AGCT | 1 cut(s) | 333 |
| AluI | AGCT | 1 cut(s) | 333 |
| AoxI | GGCC | 1 cut(s) | 39 |
| ApeKI | GCWGC | 1 cut(s) | 102 |
| ApoI | RAATTY | 1 cut(s) | 22 |
| AspLEI | GCGC | 1 cut(s) | 124 |
| AspS9I | GGNCC | 1 cut(s) | 39 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| BbsI | GAAGAC | 1 cut(s) | 43 |
| BbvI | GCAGC | 1 cut(s) | 114 |
| BccI | CCATC | 2 cut(s) | 200, 358 |
| BisI | GCNGC | 1 cut(s) | 103 |
| BlsI | GCNGC | 1 cut(s) | 104 |
| BmgT120I | GGNCC | 1 cut(s) | 39 |
| BmiI | GGNNCC | 1 cut(s) | 40 |
| BmsI | GCATC | 1 cut(s) | 172 |
| BpiI | GAAGAC | 1 cut(s) | 43 |
| Bpu10I | CCTNAGC | 1 cut(s) | 110 |
| Bse3DI | GCAATG | 3 cut(s) | 169, 192, 349 |
| BseGI | GGATG | 1 cut(s) | 91 |
| BseMI | GCAATG | 3 cut(s) | 169, 192, 349 |
| BseMII | CTCAG | 1 cut(s) | 124 |
| BseXI | GCAGC | 1 cut(s) | 114 |
| BshFI | GGCC | 1 cut(s) | 41 |
| BsnI | GGCC | 1 cut(s) | 41 |
| BspACI | CCGC | 1 cut(s) | 274 |
| BspANI | GGCC | 1 cut(s) | 41 |
| BspCNI | CTCAG | 1 cut(s) | 123 |
| BspLI | GGNNCC | 1 cut(s) | 40 |
| BsrDI | GCAATG | 3 cut(s) | 169, 192, 349 |
| BstC8I | GCNNGC | 3 cut(s) | 107, 169, 322 |
| BstDEI | CTNAG | 1 cut(s) | 110 |
| BstF5I | GGATG | 1 cut(s) | 91 |
| BstHHI | GCGC | 1 cut(s) | 124 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 38, 168, 173, 182, 330, 339 |
| BstNSI | RCATGY | 1 cut(s) | 139 |
| BstV1I | GCAGC | 1 cut(s) | 114 |
| BstV2I | GAAGAC | 1 cut(s) | 43 |
| BsuRI | GGCC | 1 cut(s) | 41 |
| BtsCI | GGATG | 1 cut(s) | 91 |
| Cac8I | GCNNGC | 3 cut(s) | 107, 169, 322 |
| CfoI | GCGC | 1 cut(s) | 124 |
| Cfr13I | GGNCC | 1 cut(s) | 39 |
| Csp6I | GTAC | 1 cut(s) | 347 |
| CviAII | CATG | 4 cut(s) | 136, 242, 336, 377 |
| CviJI | RGCY | 4 cut(s) | 41, 105, 176, 333 |
| CviKI_1 | RGCY | 4 cut(s) | 41, 105, 176, 333 |
| CviQI | GTAC | 1 cut(s) | 347 |
| DdeI | CTNAG | 1 cut(s) | 110 |
| EcoO109I | RGGNCCY | 1 cut(s) | 39 |
| FaeI | CATG | 4 cut(s) | 139, 245, 339, 380 |
| FatI | CATG | 4 cut(s) | 135, 241, 335, 376 |
| FauI | CCCGC | 1 cut(s) | 267 |
| Fnu4HI | GCNGC | 1 cut(s) | 103 |
| FokI | GGATG | 1 cut(s) | 98 |
| Fsp4HI | GCNGC | 1 cut(s) | 103 |
| GlaI | GCGC | 1 cut(s) | 123 |
| GluI | GCNGC | 1 cut(s) | 103 |
| HaeIII | GGCC | 1 cut(s) | 41 |
| HhaI | GCGC | 1 cut(s) | 124 |
| Hin1II | CATG | 4 cut(s) | 139, 245, 339, 380 |
| Hin6I | GCGC | 1 cut(s) | 122 |
| HinP1I | GCGC | 1 cut(s) | 122 |
| HinfI | GANTC | 1 cut(s) | 253 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy166II | GTNNAC | 1 cut(s) | 93 |
| Hpy188III | TCNNGA | 2 cut(s) | 196, 302 |
| Hpy8I | GTNNAC | 1 cut(s) | 93 |
| HpyAV | CCTTC | 2 cut(s) | 29, 65 |
| HpyCH4IV | ACGT | 1 cut(s) | 398 |
| HpyCH4V | TGCA | 1 cut(s) | 185 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 38, 168, 173, 182, 330, 339 |
| HpyF3I | CTNAG | 1 cut(s) | 110 |
| HpySE526I | ACGT | 1 cut(s) | 398 |
| Hsp92II | CATG | 4 cut(s) | 139, 245, 339, 380 |
| HspAI | GCGC | 1 cut(s) | 122 |
| LpnPI | CCDG | 6 cut(s) | 97, 119, 132, 302, 315, 378 |
| Lsp1109I | GCAGC | 1 cut(s) | 114 |
| LweI | GCATC | 1 cut(s) | 172 |
| MaeII | ACGT | 1 cut(s) | 398 |
| MaeIII | GTNAC | 1 cut(s) | 152 |
| MboII | GAAGA | 1 cut(s) | 43 |
| MluCI | AATT | 3 cut(s) | 7, 22, 222 |
| MmeI | TCCRAC | 1 cut(s) | 48 |
| MnlI | CCTC | 1 cut(s) | 57 |
| MseI | TTAA | 1 cut(s) | 78 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 38, 168, 173, 182, 330, 339 |
| NlaIII | CATG | 4 cut(s) | 139, 245, 339, 380 |
| NlaIV | GGNNCC | 1 cut(s) | 40 |
| NspI | RCATGY | 1 cut(s) | 139 |
| PciI | ACATGT | 1 cut(s) | 135 |
| PfeI | GAWTC | 1 cut(s) | 253 |
| PkrI | GCNGC | 1 cut(s) | 104 |
| PscI | ACATGT | 1 cut(s) | 135 |
| PspN4I | GGNNCC | 1 cut(s) | 40 |
| PspPI | GGNCC | 1 cut(s) | 39 |
| RsaI | GTAC | 1 cut(s) | 348 |
| RsaNI | GTAC | 1 cut(s) | 347 |
| SaqAI | TTAA | 1 cut(s) | 78 |
| SatI | GCNGC | 1 cut(s) | 103 |
| Sau96I | GGNCC | 1 cut(s) | 39 |
| SetI | ASST | 6 cut(s) | 68, 76, 116, 129, 335, 401 |
| SfaNI | GCATC | 1 cut(s) | 172 |
| Sse9I | AATT | 3 cut(s) | 7, 22, 222 |
| SsiI | CCGC | 1 cut(s) | 274 |
| TaiI | ACGT | 1 cut(s) | 401 |
| TasI | AATT | 3 cut(s) | 7, 22, 222 |
| TfiI | GAWTC | 1 cut(s) | 253 |
| Tru1I | TTAA | 1 cut(s) | 78 |
| Tru9I | TTAA | 1 cut(s) | 78 |
| TseI | GCWGC | 1 cut(s) | 102 |
| TspDTI | ATGAA | 2 cut(s) | 365, 375 |
| XapI | RAATTY | 1 cut(s) | 22 |
| XceI | RCATGY | 1 cut(s) | 139 |