Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46050 |
| fragaria_vesca | FvH4_7g14820 |
| malus_domestica | MD01G1066700.v1.1 MD11G1207600.v1.1 |
| pyrus_communis | pycom01g09600 pycom01g22640 pycom17g24510 |
| rosa_chinensis | RchiOBHm_Chr1g0356771 RchiOBHm_Chr1g0356781 RchiOBHm_Chr1g0375691 RchiOBHm_Chr2g0089631 RchiOBHm_Chr4g0418871 |
| rosa_laevigata | RLG00000011901 RLG00000028084 |
| rosa_multiflora | Rmu_co8104928.1_g000001 Rmu_co8368077.1_g000001 Rmu_sc0000517.1_g000030 Rmu_sc0000935.1_g000021 Rmu_sc0002219.1_g000014 Rmu_sc0005718.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00299370 |
| rosa_rugosa | Rorug01G0251100 |
| rosa_samantha | Rh1AG265300 Rh1AG265400 Rh1BG232700 Rh1BG232800 Rh1CG248800 Rh1CG248900 Rh1DG260300 Rh4BG214000 Rh6AG008500 |
| rosa_wichuraiana | Rw4G018520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 21 |
| AclWI | GGATC | 1 cut(s) | 40 |
| AcsI | RAATTY | 1 cut(s) | 118 |
| AgsI | TTSAA | 2 cut(s) | 144, 245 |
| AjnI | CCWGG | 1 cut(s) | 226 |
| AluBI | AGCT | 2 cut(s) | 47, 237 |
| AluI | AGCT | 2 cut(s) | 47, 237 |
| AlwI | GGATC | 1 cut(s) | 40 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 299 |
| AoxI | GGCC | 1 cut(s) | 211 |
| ApeKI | GCWGC | 2 cut(s) | 44, 234 |
| ApoI | RAATTY | 1 cut(s) | 118 |
| AspLEI | GCGC | 1 cut(s) | 22 |
| AspS9I | GGNCC | 1 cut(s) | 211 |
| AsuHPI | GGTGA | 1 cut(s) | 290 |
| BbvI | GCAGC | 2 cut(s) | 56, 246 |
| BccI | CCATC | 1 cut(s) | 162 |
| BciT130I | CCWGG | 1 cut(s) | 228 |
| BfaI | CTAG | 1 cut(s) | 74 |
| BisI | GCNGC | 2 cut(s) | 45, 235 |
| BlsI | GCNGC | 2 cut(s) | 46, 236 |
| Bme1390I | CCNGG | 1 cut(s) | 228 |
| BmgT120I | GGNCC | 1 cut(s) | 211 |
| BmrFI | CCNGG | 1 cut(s) | 228 |
| BmsI | GCATC | 2 cut(s) | 7, 221 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 71, 101 |
| BseBI | CCWGG | 1 cut(s) | 228 |
| BseGI | GGATG | 2 cut(s) | 178, 236 |
| BseMII | CTCAG | 2 cut(s) | 206, 291 |
| BseRI | GAGGAG | 1 cut(s) | 92 |
| BseXI | GCAGC | 2 cut(s) | 56, 246 |
| BshFI | GGCC | 1 cut(s) | 213 |
| BsnI | GGCC | 1 cut(s) | 213 |
| Bsp143I | GATC | 2 cut(s) | 32, 91 |
| BspANI | GGCC | 1 cut(s) | 213 |
| BspCNI | CTCAG | 2 cut(s) | 207, 292 |
| BspPI | GGATC | 1 cut(s) | 40 |
| BssMI | GATC | 2 cut(s) | 32, 91 |
| Bst2UI | CCWGG | 1 cut(s) | 228 |
| BstDEI | CTNAG | 2 cut(s) | 215, 300 |
| BstF5I | GGATG | 2 cut(s) | 178, 236 |
| BstHHI | GCGC | 1 cut(s) | 22 |
| BstKTI | GATC | 2 cut(s) | 35, 94 |
| BstMBI | GATC | 2 cut(s) | 32, 91 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 10, 19, 272 |
| BstNI | CCWGG | 1 cut(s) | 228 |
| BstSCI | CCNGG | 1 cut(s) | 226 |
| BstV1I | GCAGC | 2 cut(s) | 56, 246 |
| BsuRI | GGCC | 1 cut(s) | 213 |
| BtsCI | GGATG | 2 cut(s) | 178, 236 |
| CaiI | CAGNNNCTG | 1 cut(s) | 299 |
| CfoI | GCGC | 1 cut(s) | 22 |
| Cfr13I | GGNCC | 1 cut(s) | 211 |
| CviAII | CATG | 1 cut(s) | 263 |
| CviJI | RGCY | 5 cut(s) | 13, 47, 112, 213, 237 |
| CviKI_1 | RGCY | 5 cut(s) | 13, 47, 112, 213, 237 |
| DdeI | CTNAG | 2 cut(s) | 215, 300 |
| DpnI | GATC | 2 cut(s) | 34, 93 |
| DpnII | GATC | 2 cut(s) | 32, 91 |
| EcoO109I | RGGNCCY | 1 cut(s) | 211 |
| EcoRI | GAATTC | 1 cut(s) | 118 |
| EcoRII | CCWGG | 1 cut(s) | 226 |
| FaeI | CATG | 1 cut(s) | 266 |
| FaiI | YATR | 8 cut(s) | 9, 68, 132, 151, 153, 264, 312, 314 |
| FatI | CATG | 1 cut(s) | 262 |
| Fnu4HI | GCNGC | 2 cut(s) | 45, 235 |
| FokI | GGATG | 2 cut(s) | 185, 243 |
| Fsp4HI | GCNGC | 2 cut(s) | 45, 235 |
| FspBI | CTAG | 1 cut(s) | 74 |
| FspI | TGCGCA | 1 cut(s) | 21 |
| GlaI | GCGC | 1 cut(s) | 21 |
| GluI | GCNGC | 2 cut(s) | 45, 235 |
| HaeIII | GGCC | 1 cut(s) | 213 |
| HhaI | GCGC | 1 cut(s) | 22 |
| Hin1II | CATG | 1 cut(s) | 266 |
| Hin6I | GCGC | 1 cut(s) | 20 |
| HinP1I | GCGC | 1 cut(s) | 20 |
| HinfI | GANTC | 2 cut(s) | 223, 241 |
| HphI | GGTGA | 1 cut(s) | 290 |
| Hpy188I | TCNGA | 1 cut(s) | 91 |
| Hpy188III | TCNNGA | 1 cut(s) | 123 |
| HpyCH4V | TGCA | 4 cut(s) | 44, 155, 161, 234 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 10, 19, 272 |
| HpyF3I | CTNAG | 2 cut(s) | 215, 300 |
| Hsp92II | CATG | 1 cut(s) | 266 |
| HspAI | GCGC | 1 cut(s) | 20 |
| Kzo9I | GATC | 2 cut(s) | 32, 91 |
| Lsp1109I | GCAGC | 2 cut(s) | 56, 246 |
| LweI | GCATC | 2 cut(s) | 7, 221 |
| MaeI | CTAG | 1 cut(s) | 74 |
| MaeIII | GTNAC | 1 cut(s) | 278 |
| MalI | GATC | 2 cut(s) | 34, 93 |
| MboI | GATC | 2 cut(s) | 32, 91 |
| MboII | GAAGA | 2 cut(s) | 177, 266 |
| MluCI | AATT | 5 cut(s) | 95, 104, 118, 246, 323 |
| MmeI | TCCRAC | 1 cut(s) | 309 |
| MnlI | CCTC | 3 cut(s) | 70, 169, 183 |
| MseI | TTAA | 1 cut(s) | 197 |
| MspA1I | CMGCKG | 1 cut(s) | 237 |
| MspR9I | CCNGG | 1 cut(s) | 228 |
| MvaI | CCWGG | 1 cut(s) | 228 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 10, 19, 272 |
| NdeII | GATC | 2 cut(s) | 32, 91 |
| NlaIII | CATG | 1 cut(s) | 266 |
| NmuCI | GTSAC | 1 cut(s) | 278 |
| NsbI | TGCGCA | 1 cut(s) | 21 |
| PfeI | GAWTC | 2 cut(s) | 223, 241 |
| PfoI | TCCNGGA | 1 cut(s) | 226 |
| PkrI | GCNGC | 2 cut(s) | 46, 236 |
| Psp6I | CCWGG | 1 cut(s) | 226 |
| PspGI | CCWGG | 1 cut(s) | 226 |
| PspPI | GGNCC | 1 cut(s) | 211 |
| PstNI | CAGNNNCTG | 1 cut(s) | 299 |
| PvuII | CAGCTG | 1 cut(s) | 237 |
| SaqAI | TTAA | 1 cut(s) | 197 |
| SatI | GCNGC | 2 cut(s) | 45, 235 |
| Sau3AI | GATC | 2 cut(s) | 32, 91 |
| Sau96I | GGNCC | 1 cut(s) | 211 |
| ScrFI | CCNGG | 1 cut(s) | 228 |
| SetI | ASST | 3 cut(s) | 49, 180, 239 |
| SfaNI | GCATC | 2 cut(s) | 7, 221 |
| Sse9I | AATT | 5 cut(s) | 95, 104, 118, 246, 323 |
| SspMI | CTAG | 1 cut(s) | 74 |
| StyD4I | CCNGG | 1 cut(s) | 226 |
| TasI | AATT | 5 cut(s) | 95, 104, 118, 246, 323 |
| TfiI | GAWTC | 2 cut(s) | 223, 241 |
| Tru1I | TTAA | 1 cut(s) | 197 |
| Tru9I | TTAA | 1 cut(s) | 197 |
| TseFI | GTSAC | 1 cut(s) | 278 |
| TseI | GCWGC | 2 cut(s) | 44, 234 |
| Tsp45I | GTSAC | 1 cut(s) | 278 |
| TspDTI | ATGAA | 1 cut(s) | 215 |
| XapI | RAATTY | 1 cut(s) | 118 |
| XspI | CTAG | 1 cut(s) | 74 |