Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002718

Physical Location & Seq

Genomic Coordinates Forward (+)

10075527 .. 10078261

Gene Structure 2735 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G18210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1173 bp

ATGACGGCGGATCAAGAACTACAAATCATTGTTCGGCAGGGAAAAGAACCAAATCCAACAGTTCAAGATGAAAGAAATTCAGTCAGTAGCAGCCAAGCAGAAGTATCTCACTCTAACACATACAAACGGTGGCTCAGGGTGACTTTATATACATTCTTTGTCATTTCAGGCCAAACAGTTGCTACAATTTTGGGCAGAGTATACTATGACAACGGAGGAAACAGTAAATGGCTAGCAACGGTAGTTCAACTTGTTGGCTTTCCTGTGCTACTTCCATATTATATCTTGTCATTTAAAACACATGCAACAACTGATAGAGATGGAAAAAGAACCTCACCTAGGAACCGTGTATTGGTTTACGTAGTGCTTGGACTTCTTGTAGGAGCAGATTGCTATCTGTACTCCATTGGACTTCTTTACTTACCCGTTTCTACCTATTCCCTGATCTGTGCATCTCAGTTAGCCTTCAATGCTTTCTTCTCTTATTTTCTTAACTCACAAAAACTTACCCCTATCATTTTAAATTCTCTTTTCCTCCTAACTATATCTTCCACCCTACTTGCATTCAATAATGAGGAGACAGACTCCACAAAAGTTACAAAAGGAGAGTATGTCAAAGGTTTCATATGCACCGTTGCTGCGTCTGCTGGTTATGGTCTAGTCTTATCCCTACAACAGCTAGCCTTTCTAAAAGTCCTAAAGAAGCAAAATTTCTCAGAAGTTATGGATATGATAATCTACGTGAGTCTAGTGGCCAGTTGTGTTAGCGTGGTGGGGCTTTTTGCTAGCAGTGAGTGGAAAACTTTGAGCAGTGAAATGGATAACTACAAACATGGGAAGGTATCCTACATTATGAACCTAGTGTGGACAGCTGTTACCTGGCAGGTATTCTCCATCGGTGGCACAGGACTGATCTTCGAGCTCTCCTCTCTATTCTCAAATGCAATAAGCGTTTTGGGACTCCCAGTGGTTCCTATCTTGGCTGTAATCATTTTCCATGACAAAATGAATGGGTTAAAGGTGATTTCTATGATCCTAGCTATTTGGGGTTTCACTTCCTATGTCTACCAACAATATCTTGATGACAAAAACTTGAAGAAAAATCATGAAATCACAACAACAGAATCCCCTGACCCACCAGAAGCAGAAGAGTCAACTTGGCAATCAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005345 GO:0005575 GO:0006810 GO:0006863 GO:0008150 GO:0009605 GO:0009607 GO:0009624 GO:0015205 GO:0015851 GO:0016020 GO:0022857 GO:0043207 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071702 GO:0071705 GO:0072530 GO:1904823

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PUNUT

Protein Analysis

390

Amino Acids

43.48

Weight (kDa)

7.61

Isoelectric Point (pI)

32.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUNUT	PF16913	46 - 363	3.2e-122	Purine nucleobase transmembrane transport

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002718)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18195 AT4G18197 AT4G18205 AT4G18210 AT4G18220
fragaria_vesca	FvH4_3g06161 FvH4_3g06170 FvH4_3g06171
malus_domestica	MD05G1290000.v1.1 MD10G1265700.v1.1 MD10G1266100.v1.1 MD10G1266200.v1.1 MD16G1205700.v1.1
prunus_persica	Prupe.4G075600_v2.0.a1 Prupe.4G075700_v2.0.a1 Prupe.4G179000_v2.0.a1 Prupe.4G179000_v2.0.a1
pyrus_communis	pycom05g26700 pycom10g22160 pycom10g22190
rosa_chinensis	RchiOBHm_Chr2g0095021 RchiOBHm_Chr5g0011461 RchiOBHm_Chr5g0013171
rosa_laevigata	RLG00000020229 RLG00000031993
rosa_multiflora	Rmu_sc0003892.1_g000002 Rmu_sc0004521.1_g000002 Rmu_sc0004521.1_g000004
rosa_roxburghii	Rroxscaffold_1G00063430
rosa_rugosa	Rorug01G0225400 Rorug05G0007500 Rorug05G0007600 Rorug05G0007600 Rorug05G0007700
rosa_samantha	Rh5AG102000 Rh5BG098200 Rh5DG097500
rosa_wichuraiana	Rw5G008900 Rw7G021620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	874
AccI	GTMKAC	2 cut(s)	201, 1065
AciI	CCGC	1 cut(s)	8
AclWI	GGATC	2 cut(s)	18, 1027
AcoI	YGGCCR	1 cut(s)	753
AcsI	RAATTY	3 cut(s)	76, 523, 709
AfaI	GTAC	1 cut(s)	401
AfiI	CCNNNNNNNGG	2 cut(s)	339, 352
AgsI	TTSAA	5 cut(s)	65, 248, 469, 568, 1096
AjnI	CCWGG	1 cut(s)	878
AjuI	GAANNNNNNNTTGG	2 cut(s)	335, 367
AluBI	AGCT	4 cut(s)	679, 872, 922, 1040
AluI	AGCT	4 cut(s)	679, 872, 922, 1040
Alw21I	GWGCWC	1 cut(s)	924
Alw26I	GTCTC	1 cut(s)	572
AlwI	GGATC	2 cut(s)	18, 1027
AoxI	GGCC	2 cut(s)	169, 753
ApeKI	GCWGC	2 cut(s)	90, 638
ApoI	RAATTY	3 cut(s)	76, 523, 709
AspA2I	CCTAGG	1 cut(s)	338
AsuHPI	GGTGA	3 cut(s)	151, 327, 1033
AsuNHI	GCTAGC	3 cut(s)	232, 679, 785
AvrII	CCTAGG	1 cut(s)	338
BalI	TGGCCA	1 cut(s)	755
BanII	GRGCYC	1 cut(s)	924
BarI	GAAGNNNNNNTAC	2 cut(s)	830, 862
Bbv12I	GWGCWC	1 cut(s)	924
BbvI	GCAGC	2 cut(s)	102, 625
BccI	CCATC	2 cut(s)	314, 902
BceAI	ACGGC	1 cut(s)	21
BciT130I	CCWGG	1 cut(s)	880
BciVI	GTATCC	1 cut(s)	853
BcoDI	GTCTC	1 cut(s)	572
BfaI	CTAG	8 cut(s)	233, 339, 659, 680, 749, 786, 860, 1037
BfuAI	ACCTGC	1 cut(s)	874
BfuI	GTATCC	1 cut(s)	853
BisI	GCNGC	2 cut(s)	91, 639
BlnI	CCTAGG	1 cut(s)	338
BlsI	GCNGC	2 cut(s)	92, 640
Bme1390I	CCNGG	1 cut(s)	880
BmiI	GGNNCC	2 cut(s)	344, 972
BmrFI	CCNGG	1 cut(s)	880
BmrI	ACTGGG	1 cut(s)	959
BmsI	GCATC	1 cut(s)	461
BmtI	GCTAGC	3 cut(s)	236, 683, 789
BmuI	ACTGGG	1 cut(s)	959
BplI	GAGNNNNNCTC	4 cut(s)	569, 601, 911, 943
Bpu10I	CCTNAGC	1 cut(s)	134
BsaAI	YACGTR	2 cut(s)	361, 742
BsaBI	GATNNNNATC	1 cut(s)	393
BsaJI	CCNNGG	1 cut(s)	338
BsaXI	ACNNNNNCTCC	2 cut(s)	597, 627
Bsc4I	CCNNNNNNNGG	2 cut(s)	339, 352
Bse1I	ACTGG	2 cut(s)	756, 965
Bse8I	GATNNNNATC	1 cut(s)	393
BseBI	CCWGG	1 cut(s)	880
BseDI	CCNNGG	1 cut(s)	338
BseJI	GATNNNNATC	1 cut(s)	393
BseLI	CCNNNNNNNGG	2 cut(s)	339, 352
BseMII	CTCAG	3 cut(s)	148, 470, 729
BseNI	ACTGG	2 cut(s)	756, 965
BseRI	GAGGAG	2 cut(s)	590, 916
BseXI	GCAGC	2 cut(s)	102, 625
BshFI	GGCC	2 cut(s)	171, 755
BsiHKAI	GWGCWC	1 cut(s)	924
BslFI	GGGAC	1 cut(s)	972
BslI	CCNNNNNNNGG	2 cut(s)	339, 352
BsmAI	GTCTC	1 cut(s)	572
BsmFI	GGGAC	1 cut(s)	972
BsmI	GAATGC	1 cut(s)	563
BsnI	GGCC	2 cut(s)	171, 755
Bsp1286I	GDGCHC	1 cut(s)	924
Bsp143I	GATC	4 cut(s)	10, 444, 912, 1032
BspACI	CCGC	1 cut(s)	8
BspANI	GGCC	2 cut(s)	171, 755
BspCNI	CTCAG	3 cut(s)	147, 469, 728
BspHI	TCATGA	1 cut(s)	1105
BspLI	GGNNCC	2 cut(s)	344, 972
BspMI	ACCTGC	1 cut(s)	874
BspOI	GCTAGC	3 cut(s)	236, 683, 789
BspPI	GGATC	2 cut(s)	18, 1027
BsrI	ACTGG	2 cut(s)	756, 965
BssECI	CCNNGG	1 cut(s)	338
BssMI	GATC	4 cut(s)	10, 444, 912, 1032
BssNAI	GTATAC	1 cut(s)	202
BssT1I	CCWWGG	1 cut(s)	338
Bst1107I	GTATAC	1 cut(s)	202
Bst2UI	CCWGG	1 cut(s)	880
Bst4CI	ACNGT	7 cut(s)	61, 129, 178, 224, 241, 347, 634
Bst6I	CTCTTC	1 cut(s)	1143
BstBAI	YACGTR	2 cut(s)	361, 742
BstC8I	GCNNGC	3 cut(s)	234, 681, 787
BstDEI	CTNAG	3 cut(s)	134, 456, 715
BstENI	CCTNNNNNAGG	1 cut(s)	337
BstKTI	GATC	4 cut(s)	13, 447, 915, 1035
BstMAI	GTCTC	1 cut(s)	572
BstMBI	GATC	4 cut(s)	10, 444, 912, 1032
BstMWI	GCNNNNNNNGC	2 cut(s)	470, 644
BstNI	CCWGG	1 cut(s)	880
BstNSI	RCATGY	1 cut(s)	305
BstSCI	CCNGG	1 cut(s)	878
BstSNI	TACGTA	1 cut(s)	361
BstV1I	GCAGC	2 cut(s)	102, 625
BstZ17I	GTATAC	1 cut(s)	202
BsuI	GTATCC	1 cut(s)	853
BsuRI	GGCC	2 cut(s)	171, 755
BtsI	GCAGTG	2 cut(s)	796, 817
BtsIMutI	CAGTG	3 cut(s)	796, 817, 972
BveI	ACCTGC	1 cut(s)	874
Cac8I	GCNNGC	3 cut(s)	234, 681, 787
CciI	TCATGA	1 cut(s)	1105
CseI	GACGC	1 cut(s)	630
Csp6I	GTAC	1 cut(s)	400
CspCI	CAANNNNNGTGG	2 cut(s)	541, 576
CviAII	CATG	4 cut(s)	302, 833, 998, 1106
CviQI	GTAC	1 cut(s)	400
DdeI	CTNAG	3 cut(s)	134, 456, 715
DpnI	GATC	4 cut(s)	12, 446, 914, 1034
DpnII	GATC	4 cut(s)	10, 444, 912, 1032
DraI	TTTAAA	2 cut(s)	295, 522
EaeI	YGGCCR	1 cut(s)	753
Eam1104I	CTCTTC	1 cut(s)	1143
EarI	CTCTTC	1 cut(s)	1143
EciI	GGCGGA	1 cut(s)	23
Ecl136II	GAGCTC	1 cut(s)	922
Eco105I	TACGTA	1 cut(s)	361
Eco130I	CCWWGG	1 cut(s)	338
Eco24I	GRGCYC	1 cut(s)	924
Eco53kI	GAGCTC	1 cut(s)	922
EcoICRI	GAGCTC	1 cut(s)	922
EcoNI	CCTNNNNNAGG	1 cut(s)	337
EcoRII	CCWGG	1 cut(s)	878
EcoT14I	CCWWGG	1 cut(s)	338
EcoT38I	GRGCYC	1 cut(s)	924
ErhI	CCWWGG	1 cut(s)	338
FaeI	CATG	4 cut(s)	305, 836, 1001, 1109
FaqI	GGGAC	1 cut(s)	972
FatI	CATG	4 cut(s)	301, 832, 997, 1105
FauNDI	CATATG	1 cut(s)	626
FblI	GTMKAC	2 cut(s)	201, 1065
Fnu4HI	GCNGC	2 cut(s)	91, 639
FriOI	GRGCYC	1 cut(s)	924
Fsp4HI	GCNGC	2 cut(s)	91, 639
FspBI	CTAG	8 cut(s)	233, 339, 659, 680, 749, 786, 860, 1037
GluI	GCNGC	2 cut(s)	91, 639
HaeIII	GGCC	2 cut(s)	171, 755
HgaI	GACGC	1 cut(s)	630
Hin1II	CATG	4 cut(s)	305, 836, 1001, 1109
HincII	GTYRAC	1 cut(s)	1155
HindII	GTYRAC	1 cut(s)	1155
HinfI	GANTC	5 cut(s)	584, 745, 960, 1124, 1151
HphI	GGTGA	3 cut(s)	151, 327, 1033
Hpy166II	GTNNAC	5 cut(s)	202, 358, 867, 1066, 1155
Hpy188I	TCNGA	1 cut(s)	718
Hpy188III	TCNNGA	4 cut(s)	14, 65, 1079, 1106
Hpy8I	GTNNAC	5 cut(s)	202, 358, 867, 1066, 1155
HpyAV	CCTTC	2 cut(s)	475, 832
HpyCH4III	ACNGT	7 cut(s)	61, 129, 178, 224, 241, 347, 634
HpyCH4IV	ACGT	2 cut(s)	360, 741
HpyCH4V	TGCA	5 cut(s)	305, 452, 563, 630, 944
HpyF10VI	GCNNNNNNNGC	2 cut(s)	470, 644
HpyF3I	CTNAG	3 cut(s)	134, 456, 715
HpySE526I	ACGT	2 cut(s)	360, 741
Hsp92II	CATG	4 cut(s)	305, 836, 1001, 1109
Kzo9I	GATC	4 cut(s)	10, 444, 912, 1032
LmnI	GCTCC	1 cut(s)	383
Lsp1109I	GCAGC	2 cut(s)	102, 625
LweI	GCATC	1 cut(s)	461
MaeI	CTAG	8 cut(s)	233, 339, 659, 680, 749, 786, 860, 1037
MaeII	ACGT	2 cut(s)	360, 741
MaeIII	GTNAC	3 cut(s)	139, 595, 874
MalI	GATC	4 cut(s)	12, 446, 914, 1034
MboI	GATC	4 cut(s)	10, 444, 912, 1032
MboII	GAAGA	5 cut(s)	469, 540, 907, 1108, 1160
MhlI	GDGCHC	1 cut(s)	924
MlsI	TGGCCA	1 cut(s)	755
MluCI	AATT	4 cut(s)	76, 186, 523, 709
MluNI	TGGCCA	1 cut(s)	755
MlyI	GAGTC	4 cut(s)	578, 754, 954, 1160
MmeI	TCCRAC	1 cut(s)	80
MnlI	CCTC	5 cut(s)	209, 343, 545, 568, 937
Mox20I	TGGCCA	1 cut(s)	755
MscI	TGGCCA	1 cut(s)	755
MseI	TTAA	4 cut(s)	294, 492, 521, 1016
Msp20I	TGGCCA	1 cut(s)	755
MspA1I	CMGCKG	1 cut(s)	872
MspR9I	CCNGG	1 cut(s)	880
Mva1269I	GAATGC	1 cut(s)	563
MvaI	CCWGG	1 cut(s)	880
MwoI	GCNNNNNNNGC	2 cut(s)	470, 644
NdeI	CATATG	1 cut(s)	626
NdeII	GATC	4 cut(s)	10, 444, 912, 1032
NheI	GCTAGC	3 cut(s)	232, 679, 785
NlaIII	CATG	4 cut(s)	305, 836, 1001, 1109
NlaIV	GGNNCC	2 cut(s)	344, 972
NmuCI	GTSAC	1 cut(s)	139
NspI	RCATGY	1 cut(s)	305
PagI	TCATGA	1 cut(s)	1105
PctI	GAATGC	1 cut(s)	563
PfeI	GAWTC	1 cut(s)	1124
PkrI	GCNGC	2 cut(s)	92, 640
PleI	GAGTC	4 cut(s)	578, 753, 954, 1159
PpsI	GAGTC	4 cut(s)	578, 753, 954, 1159
Ppu21I	YACGTR	2 cut(s)	361, 742
Psp124BI	GAGCTC	1 cut(s)	924
Psp6I	CCWGG	1 cut(s)	878
PspGI	CCWGG	1 cut(s)	878
PspN4I	GGNNCC	2 cut(s)	344, 972
PvuII	CAGCTG	1 cut(s)	872
RsaI	GTAC	1 cut(s)	401
RsaNI	GTAC	1 cut(s)	400
SacI	GAGCTC	1 cut(s)	924
SaqAI	TTAA	4 cut(s)	294, 492, 521, 1016
SatI	GCNGC	2 cut(s)	91, 639
Sau3AI	GATC	4 cut(s)	10, 444, 912, 1032
SchI	GAGTC	4 cut(s)	578, 754, 954, 1160
ScrFI	CCNGG	1 cut(s)	880
SduI	GDGCHC	1 cut(s)	924
SfaNI	GCATC	1 cut(s)	461
SnaBI	TACGTA	1 cut(s)	361
Sse9I	AATT	4 cut(s)	76, 186, 523, 709
SsiI	CCGC	1 cut(s)	8
SspMI	CTAG	8 cut(s)	233, 339, 659, 680, 749, 786, 860, 1037
SstI	GAGCTC	1 cut(s)	924
StyD4I	CCNGG	1 cut(s)	878
StyI	CCWWGG	1 cut(s)	338
TaaI	ACNGT	7 cut(s)	61, 129, 178, 224, 241, 347, 634
TaiI	ACGT	2 cut(s)	363, 744
TaqI	TCGA	1 cut(s)	918
TasI	AATT	4 cut(s)	76, 186, 523, 709
TatI	WGTACW	1 cut(s)	399
TfiI	GAWTC	1 cut(s)	1124
Tru1I	TTAA	4 cut(s)	294, 492, 521, 1016
Tru9I	TTAA	4 cut(s)	294, 492, 521, 1016
TscAI	CASTG	3 cut(s)	796, 817, 972
TseFI	GTSAC	1 cut(s)	139
TseI	GCWGC	2 cut(s)	90, 638
Tsp45I	GTSAC	1 cut(s)	139
TspDTI	ATGAA	5 cut(s)	84, 613, 869, 1022, 1122
TspGWI	ACGGA	1 cut(s)	228
TspRI	CASTG	3 cut(s)	796, 817, 972
XagI	CCTNNNNNAGG	1 cut(s)	337
XapI	RAATTY	3 cut(s)	76, 523, 709
XceI	RCATGY	1 cut(s)	305
XmaJI	CCTAGG	1 cut(s)	338
XmiI	GTMKAC	2 cut(s)	201, 1065
XspI	CTAG	8 cut(s)	233, 339, 659, 680, 749, 786, 860, 1037

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.