purine permease
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G18195 AT4G18197 AT4G18205 AT4G18210 AT4G18220 |
| fragaria_vesca | FvH4_3g06161 FvH4_3g06170 FvH4_3g06171 |
| malus_domestica | MD05G1290000.v1.1 MD10G1265700.v1.1 MD10G1266100.v1.1 MD10G1266200.v1.1 MD16G1205700.v1.1 |
| prunus_persica | Prupe.4G075600_v2.0.a1 Prupe.4G075700_v2.0.a1 Prupe.4G179000_v2.0.a1 Prupe.4G179000_v2.0.a1 |
| pyrus_communis | pycom05g26700 pycom10g22160 pycom10g22190 |
| rosa_chinensis | RchiOBHm_Chr2g0095021 RchiOBHm_Chr5g0011461 RchiOBHm_Chr5g0013171 |
| rosa_laevigata | RLG00000020229 RLG00000031993 |
| rosa_multiflora | Rmu_sc0003892.1_g000002 Rmu_sc0004521.1_g000002 Rmu_sc0004521.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00063430 |
| rosa_rugosa | Rorug01G0225400 Rorug05G0007500 Rorug05G0007600 Rorug05G0007600 Rorug05G0007700 |
| rosa_samantha | Rh5AG102000 Rh5BG098200 Rh5DG097500 |
| rosa_wichuraiana | Rw5G008900 Rw7G021620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2944 |
| Acc16I | TGCGCA | 1 cut(s) | 128 |
| Acc36I | ACCTGC | 3 cut(s) | 295, 1825, 2944 |
| AccB1I | GGYRCC | 1 cut(s) | 2936 |
| AccBSI | CCGCTC | 1 cut(s) | 1648 |
| AccI | GTMKAC | 1 cut(s) | 1503 |
| AccII | CGCG | 1 cut(s) | 729 |
| AciI | CCGC | 5 cut(s) | 511, 1242, 1646, 2541, 3144 |
| AcsI | RAATTY | 3 cut(s) | 1261, 2863, 3177 |
| AdeI | CACNNNGTG | 1 cut(s) | 2553 |
| AfaI | GTAC | 8 cut(s) | 76, 343, 940, 1758, 1777, 1894, 2085, 2492 |
| AflIII | ACRYGT | 2 cut(s) | 836, 1564 |
| AgeI | ACCGGT | 2 cut(s) | 662, 2674 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 40, 409 |
| AjnI | CCWGG | 4 cut(s) | 1161, 1655, 1713, 2788 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 870, 902 |
| Alw21I | GWGCWC | 4 cut(s) | 27, 1736, 2508, 3162 |
| Alw26I | GTCTC | 3 cut(s) | 48, 177, 2095 |
| Alw44I | GTGCAC | 1 cut(s) | 23 |
| Ama87I | CYCGRG | 4 cut(s) | 38, 1422, 1633, 2876 |
| AoxI | GGCC | 6 cut(s) | 652, 678, 780, 1213, 1413, 2293 |
| ApaLI | GTGCAC | 1 cut(s) | 23 |
| ApeKI | GCWGC | 5 cut(s) | 347, 614, 2037, 2576, 3146 |
| ApoI | RAATTY | 3 cut(s) | 1261, 2863, 3177 |
| AsiGI | ACCGGT | 2 cut(s) | 662, 2674 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 968 |
| AspLEI | GCGC | 4 cut(s) | 102, 129, 718, 1800 |
| AspS9I | GGNCC | 6 cut(s) | 653, 678, 780, 1642, 1814, 2777 |
| AsuC2I | CCSGG | 2 cut(s) | 891, 1085 |
| AsuHPI | GGTGA | 9 cut(s) | 176, 254, 866, 905, 1061, 1435, 2437, 2500, 2968 |
| AsuII | TTCGAA | 1 cut(s) | 2185 |
| AvaI | CYCGRG | 4 cut(s) | 38, 1422, 1633, 2876 |
| AvaII | GGWCC | 3 cut(s) | 1642, 1814, 2777 |
| AxyI | CCTNAGG | 1 cut(s) | 1226 |
| BaeGI | GKGCMC | 3 cut(s) | 27, 526, 2197 |
| BamHI | GGATCC | 3 cut(s) | 428, 815, 3101 |
| BanI | GGYRCC | 1 cut(s) | 2936 |
| BanII | GRGCYC | 4 cut(s) | 1090, 1454, 2508, 3162 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1759, 1791 |
| BauI | CACGAG | 1 cut(s) | 2127 |
| BbsI | GAAGAC | 3 cut(s) | 1206, 1403, 3020 |
| Bbv12I | GWGCWC | 4 cut(s) | 27, 1736, 2508, 3162 |
| BbvI | GCAGC | 5 cut(s) | 334, 601, 2024, 2588, 3133 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 606, 640 |
| BciT130I | CCWGG | 4 cut(s) | 1163, 1657, 1715, 2790 |
| BciVI | GTATCC | 1 cut(s) | 1316 |
| BcnI | CCSGG | 2 cut(s) | 891, 1085 |
| BcoDI | GTCTC | 3 cut(s) | 48, 177, 2095 |
| BfaI | CTAG | 4 cut(s) | 1985, 2018, 2618, 3155 |
| BfmI | CTRYAG | 5 cut(s) | 273, 572, 615, 774, 882 |
| BfoI | RGCGCY | 1 cut(s) | 103 |
| BfuAI | ACCTGC | 3 cut(s) | 295, 1825, 2944 |
| BfuI | GTATCC | 1 cut(s) | 1316 |
| BisI | GCNGC | 6 cut(s) | 348, 511, 615, 2038, 2577, 3147 |
| BlsI | GCNGC | 6 cut(s) | 349, 512, 616, 2039, 2578, 3148 |
| BmcAI | AGTACT | 4 cut(s) | 76, 343, 1758, 1777 |
| Bme1390I | CCNGG | 6 cut(s) | 891, 1085, 1163, 1657, 1715, 2790 |
| Bme18I | GGWCC | 3 cut(s) | 1642, 1814, 2777 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 40, 409 |
| BmeT110I | CYCGRG | 4 cut(s) | 38, 1422, 1633, 2876 |
| BmgT120I | GGNCC | 6 cut(s) | 653, 678, 780, 1642, 1814, 2777 |
| BmrFI | CCNGG | 6 cut(s) | 891, 1085, 1163, 1657, 1715, 2790 |
| BmrI | ACTGGG | 1 cut(s) | 509 |
| BmsI | GCATC | 5 cut(s) | 235, 346, 1599, 2320, 2802 |
| BmuI | ACTGGG | 1 cut(s) | 509 |
| BpiI | GAAGAC | 3 cut(s) | 1206, 1403, 3020 |
| BpmI | CTGGAG | 3 cut(s) | 327, 350, 1736 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3097 |
| Bpu14I | TTCGAA | 1 cut(s) | 2185 |
| BpuEI | CTTGAG | 2 cut(s) | 1925, 2522 |
| BpuMI | CCSGG | 2 cut(s) | 891, 1085 |
| BsaBI | GATNNNNATC | 3 cut(s) | 315, 1145, 1304 |
| BsaI | GGTCTC | 2 cut(s) | 177, 2095 |
| BsaJI | CCNNGG | 4 cut(s) | 436, 1446, 1656, 2788 |
| BsaWI | WCCGGW | 2 cut(s) | 662, 2674 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 526, 556 |
| Bse118I | RCCGGY | 2 cut(s) | 662, 2674 |
| Bse1I | ACTGG | 9 cut(s) | 28, 69, 101, 244, 515, 1486, 1555, 2091, 3081 |
| Bse21I | CCTNAGG | 1 cut(s) | 1226 |
| Bse8I | GATNNNNATC | 3 cut(s) | 315, 1145, 1304 |
| BseBI | CCWGG | 4 cut(s) | 1163, 1657, 1715, 2790 |
| BseDI | CCNNGG | 4 cut(s) | 436, 1446, 1656, 2788 |
| BseJI | GATNNNNATC | 3 cut(s) | 315, 1145, 1304 |
| BseMII | CTCAG | 4 cut(s) | 59, 1962, 2106, 3111 |
| BseNI | ACTGG | 9 cut(s) | 28, 69, 101, 244, 515, 1486, 1555, 2091, 3081 |
| BseRI | GAGGAG | 1 cut(s) | 125 |
| BseSI | GKGCMC | 3 cut(s) | 27, 526, 2197 |
| BseXI | GCAGC | 5 cut(s) | 334, 601, 2024, 2588, 3133 |
| BsgI | GTGCAG | 1 cut(s) | 2023 |
| Bsh1236I | CGCG | 1 cut(s) | 729 |
| BshFI | GGCC | 6 cut(s) | 654, 680, 782, 1215, 1415, 2295 |
| BshNI | GGYRCC | 1 cut(s) | 2936 |
| BshTI | ACCGGT | 2 cut(s) | 662, 2674 |
| BsiHKAI | GWGCWC | 4 cut(s) | 27, 1736, 2508, 3162 |
| BsiHKCI | CYCGRG | 4 cut(s) | 38, 1422, 1633, 2876 |
| BsiSI | CCGG | 4 cut(s) | 663, 891, 1084, 2675 |
| BslFI | GGGAC | 4 cut(s) | 283, 1441, 2386, 2435 |
| BsmAI | GTCTC | 3 cut(s) | 48, 177, 2095 |
| BsmFI | GGGAC | 4 cut(s) | 283, 1441, 2386, 2435 |
| BsmI | GAATGC | 1 cut(s) | 1683 |
| BsnI | GGCC | 6 cut(s) | 654, 680, 782, 1215, 1415, 2295 |
| Bso31I | GGTCTC | 2 cut(s) | 177, 2095 |
| BsoBI | CYCGRG | 4 cut(s) | 38, 1422, 1633, 2876 |
| Bsp119I | TTCGAA | 1 cut(s) | 2185 |
| Bsp1286I | GDGCHC | 8 cut(s) | 27, 526, 1090, 1454, 1736, 2197, 2508, 3162 |
| Bsp143I | GATC | 7 cut(s) | 321, 428, 815, 878, 1140, 1299, 3101 |
| BspACI | CCGC | 5 cut(s) | 511, 1242, 1646, 2541, 3144 |
| BspANI | GGCC | 6 cut(s) | 654, 680, 782, 1215, 1415, 2295 |
| BspCNI | CTCAG | 4 cut(s) | 58, 1963, 2105, 3110 |
| BspFNI | CGCG | 1 cut(s) | 729 |
| BspMAI | CTGCAG | 2 cut(s) | 619, 778 |
| BspMI | ACCTGC | 3 cut(s) | 295, 1825, 2944 |
| BspT104I | TTCGAA | 1 cut(s) | 2185 |
| BspT107I | GGYRCC | 1 cut(s) | 2936 |
| BspTNI | GGTCTC | 2 cut(s) | 177, 2095 |
| BsrBI | CCGCTC | 1 cut(s) | 1648 |
| BsrFI | RCCGGY | 2 cut(s) | 662, 2674 |
| BsrI | ACTGG | 9 cut(s) | 28, 69, 101, 244, 515, 1486, 1555, 2091, 3081 |
| BssAI | RCCGGY | 2 cut(s) | 662, 2674 |
| BssECI | CCNNGG | 4 cut(s) | 436, 1446, 1656, 2788 |
| BssMI | GATC | 7 cut(s) | 321, 428, 815, 878, 1140, 1299, 3101 |
| BssSI | CACGAG | 1 cut(s) | 2127 |
| BssT1I | CCWWGG | 1 cut(s) | 436 |
| Bst2BI | CACGAG | 1 cut(s) | 2127 |
| Bst2UI | CCWGG | 4 cut(s) | 1163, 1657, 1715, 2790 |
| Bst4CI | ACNGT | 6 cut(s) | 55, 576, 886, 943, 1447, 2831 |
| Bst6I | CTCTTC | 2 cut(s) | 1608, 2619 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 380 |
| BstBI | TTCGAA | 1 cut(s) | 2185 |
| BstDEI | CTNAG | 6 cut(s) | 45, 1226, 1971, 2092, 3092, 3097 |
| BstDSI | CCRYGG | 1 cut(s) | 1446 |
| BstEII | GGTNACC | 1 cut(s) | 2443 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 549 |
| BstFNI | CGCG | 1 cut(s) | 729 |
| BstH2I | RGCGCY | 1 cut(s) | 103 |
| BstHHI | GCGC | 4 cut(s) | 102, 129, 718, 1800 |
| BstKTI | GATC | 7 cut(s) | 324, 431, 818, 881, 1143, 1302, 3104 |
| BstMAI | GTCTC | 3 cut(s) | 48, 177, 2095 |
| BstMBI | GATC | 7 cut(s) | 321, 428, 815, 878, 1140, 1299, 3101 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 356, 380, 686, 2576, 2936, 2993 |
| BstNI | CCWGG | 4 cut(s) | 1163, 1657, 1715, 2790 |
| BstNSI | RCATGY | 5 cut(s) | 374, 840, 1015, 1568, 1927 |
| BstPI | GGTNACC | 1 cut(s) | 2443 |
| BstSCI | CCNGG | 6 cut(s) | 889, 1083, 1161, 1655, 1713, 2788 |
| BstSFI | CTRYAG | 5 cut(s) | 273, 572, 615, 774, 882 |
| BstSLI | GKGCMC | 3 cut(s) | 27, 526, 2197 |
| BstUI | CGCG | 1 cut(s) | 729 |
| BstV1I | GCAGC | 5 cut(s) | 334, 601, 2024, 2588, 3133 |
| BstV2I | GAAGAC | 3 cut(s) | 1206, 1403, 3020 |
| BstX2I | RGATCY | 5 cut(s) | 428, 815, 878, 1140, 3101 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 790, 2587 |
| BstYI | RGATCY | 5 cut(s) | 428, 815, 878, 1140, 3101 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1226 |
| BsuI | GTATCC | 1 cut(s) | 1316 |
| BsuRI | GGCC | 6 cut(s) | 654, 680, 782, 1215, 1415, 2295 |
| BtgI | CCRYGG | 1 cut(s) | 1446 |
| BtsI | GCAGTG | 4 cut(s) | 624, 1416, 1756, 2012 |
| BveI | ACCTGC | 3 cut(s) | 295, 1825, 2944 |
| CfoI | GCGC | 4 cut(s) | 102, 129, 718, 1800 |
| Cfr10I | RCCGGY | 2 cut(s) | 662, 2674 |
| Cfr13I | GGNCC | 6 cut(s) | 653, 678, 780, 1642, 1814, 2777 |
| Csp6I | GTAC | 8 cut(s) | 75, 342, 939, 1757, 1776, 1893, 2084, 2491 |
| CspAI | ACCGGT | 2 cut(s) | 662, 2674 |
| CviQI | GTAC | 8 cut(s) | 75, 342, 939, 1757, 1776, 1893, 2084, 2491 |
| DdeI | CTNAG | 6 cut(s) | 45, 1226, 1971, 2092, 3092, 3097 |
| DpnI | GATC | 7 cut(s) | 323, 430, 817, 880, 1142, 1301, 3103 |
| DpnII | GATC | 7 cut(s) | 321, 428, 815, 878, 1140, 1299, 3101 |
| DraIII | CACNNNGTG | 1 cut(s) | 2553 |
| DriI | GACNNNNNGTC | 2 cut(s) | 40, 409 |
| Eam1104I | CTCTTC | 2 cut(s) | 1608, 2619 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 40, 409 |
| EarI | CTCTTC | 2 cut(s) | 1608, 2619 |
| Ecl136II | GAGCTC | 2 cut(s) | 2506, 3160 |
| Eco130I | CCWWGG | 1 cut(s) | 436 |
| Eco24I | GRGCYC | 4 cut(s) | 1090, 1454, 2508, 3162 |
| Eco31I | GGTCTC | 2 cut(s) | 177, 2095 |
| Eco47I | GGWCC | 3 cut(s) | 1642, 1814, 2777 |
| Eco53kI | GAGCTC | 2 cut(s) | 2506, 3160 |
| Eco81I | CCTNAGG | 1 cut(s) | 1226 |
| Eco88I | CYCGRG | 4 cut(s) | 38, 1422, 1633, 2876 |
| Eco91I | GGTNACC | 1 cut(s) | 2443 |
| EcoICRI | GAGCTC | 2 cut(s) | 2506, 3160 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 549 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1642, 1814 |
| EcoO65I | GGTNACC | 1 cut(s) | 2443 |
| EcoRI | GAATTC | 1 cut(s) | 2863 |
| EcoRII | CCWGG | 4 cut(s) | 1161, 1655, 1713, 2788 |
| EcoT14I | CCWWGG | 1 cut(s) | 436 |
| EcoT38I | GRGCYC | 4 cut(s) | 1090, 1454, 2508, 3162 |
| ErhI | CCWWGG | 1 cut(s) | 436 |
| FaqI | GGGAC | 4 cut(s) | 283, 1441, 2386, 2435 |
| FauI | CCCGC | 1 cut(s) | 1653 |
| FblI | GTMKAC | 1 cut(s) | 1503 |
| Fnu4HI | GCNGC | 6 cut(s) | 348, 511, 615, 2038, 2577, 3147 |
| FriOI | GRGCYC | 4 cut(s) | 1090, 1454, 2508, 3162 |
| Fsp4HI | GCNGC | 6 cut(s) | 348, 511, 615, 2038, 2577, 3147 |
| FspBI | CTAG | 4 cut(s) | 1985, 2018, 2618, 3155 |
| FspI | TGCGCA | 1 cut(s) | 128 |
| GlaI | GCGC | 4 cut(s) | 101, 128, 717, 1799 |
| GluI | GCNGC | 6 cut(s) | 348, 511, 615, 2038, 2577, 3147 |
| GsuI | CTGGAG | 3 cut(s) | 327, 350, 1736 |
| HaeII | RGCGCY | 1 cut(s) | 103 |
| HaeIII | GGCC | 6 cut(s) | 654, 680, 782, 1215, 1415, 2295 |
| HapII | CCGG | 4 cut(s) | 663, 891, 1084, 2675 |
| HhaI | GCGC | 4 cut(s) | 102, 129, 718, 1800 |
| Hin6I | GCGC | 4 cut(s) | 100, 127, 716, 1798 |
| HinP1I | GCGC | 4 cut(s) | 100, 127, 716, 1798 |
| HincII | GTYRAC | 1 cut(s) | 2077 |
| HindII | GTYRAC | 1 cut(s) | 2077 |
| HindIII | AAGCTT | 3 cut(s) | 1575, 2055, 2733 |
| HpaII | CCGG | 4 cut(s) | 663, 891, 1084, 2675 |
| HphI | GGTGA | 9 cut(s) | 176, 254, 866, 905, 1061, 1435, 2437, 2500, 2968 |
| Hpy166II | GTNNAC | 3 cut(s) | 25, 1504, 2077 |
| Hpy8I | GTNNAC | 3 cut(s) | 25, 1504, 2077 |
| HpyCH4III | ACNGT | 6 cut(s) | 55, 576, 886, 943, 1447, 2831 |
| HpyCH4IV | ACGT | 2 cut(s) | 1022, 2889 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 356, 380, 686, 2576, 2936, 2993 |
| HpyF3I | CTNAG | 6 cut(s) | 45, 1226, 1971, 2092, 3092, 3097 |
| HpySE526I | ACGT | 2 cut(s) | 1022, 2889 |
| HspAI | GCGC | 4 cut(s) | 100, 127, 716, 1798 |
| Kzo9I | GATC | 7 cut(s) | 321, 428, 815, 878, 1140, 1299, 3101 |
| LmnI | GCTCC | 6 cut(s) | 547, 573, 1653, 2268, 2338, 3165 |
| Lsp1109I | GCAGC | 5 cut(s) | 334, 601, 2024, 2588, 3133 |
| LweI | GCATC | 5 cut(s) | 235, 346, 1599, 2320, 2802 |
| MaeI | CTAG | 4 cut(s) | 1985, 2018, 2618, 3155 |
| MaeII | ACGT | 2 cut(s) | 1022, 2889 |
| MaeIII | GTNAC | 8 cut(s) | 391, 854, 1018, 1366, 1441, 1546, 2443, 2608 |
| MalI | GATC | 7 cut(s) | 323, 430, 817, 880, 1142, 1301, 3103 |
| MbiI | CCGCTC | 1 cut(s) | 1648 |
| MboI | GATC | 7 cut(s) | 321, 428, 815, 878, 1140, 1299, 3101 |
| MfeI | CAATTG | 3 cut(s) | 2571, 2585, 3054 |
| MflI | RGATCY | 5 cut(s) | 428, 815, 878, 1140, 3101 |
| MhlI | GDGCHC | 8 cut(s) | 27, 526, 1090, 1454, 1736, 2197, 2508, 3162 |
| MlyI | GAGTC | 6 cut(s) | 50, 419, 2082, 2325, 2605, 2822 |
| MmeI | TCCRAC | 5 cut(s) | 1277, 2293, 2299, 2360, 2672 |
| MroXI | GAANNNNTTC | 1 cut(s) | 968 |
| MseI | TTAA | 9 cut(s) | 530, 786, 1265, 1722, 1905, 2000, 2006, 3069, 3208 |
| MslI | CAYNNNNRTG | 6 cut(s) | 788, 1569, 1851, 2366, 2606, 3110 |
| MspA1I | CMGCKG | 1 cut(s) | 3146 |
| MspI | CCGG | 4 cut(s) | 663, 891, 1084, 2675 |
| MspR9I | CCNGG | 6 cut(s) | 891, 1085, 1163, 1657, 1715, 2790 |
| MunI | CAATTG | 3 cut(s) | 2571, 2585, 3054 |
| Mva1269I | GAATGC | 1 cut(s) | 1683 |
| MvaI | CCWGG | 4 cut(s) | 1163, 1657, 1715, 2790 |
| MvnI | CGCG | 1 cut(s) | 729 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 356, 380, 686, 2576, 2936, 2993 |
| NciI | CCSGG | 2 cut(s) | 891, 1085 |
| NdeII | GATC | 7 cut(s) | 321, 428, 815, 878, 1140, 1299, 3101 |
| NmuCI | GTSAC | 6 cut(s) | 391, 854, 1441, 1546, 2443, 2608 |
| NsbI | TGCGCA | 1 cut(s) | 128 |
| NspI | RCATGY | 5 cut(s) | 374, 840, 1015, 1568, 1927 |
| NspV | TTCGAA | 1 cut(s) | 2185 |
| PaeI | GCATGC | 3 cut(s) | 374, 1015, 1927 |
| PaeR7I | CTCGAG | 4 cut(s) | 38, 1422, 1633, 2876 |
| PaqCI | CACCTGC | 1 cut(s) | 2944 |
| PciI | ACATGT | 2 cut(s) | 836, 1564 |
| PctI | GAATGC | 1 cut(s) | 1683 |
| PdmI | GAANNNNTTC | 1 cut(s) | 968 |
| PfeI | GAWTC | 6 cut(s) | 115, 477, 1590, 2690, 3140, 3188 |
| PflFI | GACNNNGTC | 1 cut(s) | 1544 |
| PfoI | TCCNGGA | 1 cut(s) | 1713 |
| PinAI | ACCGGT | 2 cut(s) | 662, 2674 |
| PkrI | GCNGC | 6 cut(s) | 349, 512, 616, 2039, 2578, 3148 |
| PleI | GAGTC | 6 cut(s) | 49, 418, 2081, 2324, 2605, 2821 |
| PpsI | GAGTC | 6 cut(s) | 49, 418, 2081, 2324, 2605, 2821 |
| PpuMI | RGGWCCY | 2 cut(s) | 1642, 1814 |
| PscI | ACATGT | 2 cut(s) | 836, 1564 |
| Psp124BI | GAGCTC | 2 cut(s) | 2508, 3162 |
| Psp5II | RGGWCCY | 2 cut(s) | 1642, 1814 |
| Psp6I | CCWGG | 4 cut(s) | 1161, 1655, 1713, 2788 |
| PspEI | GGTNACC | 1 cut(s) | 2443 |
| PspGI | CCWGG | 4 cut(s) | 1161, 1655, 1713, 2788 |
| PspPI | GGNCC | 6 cut(s) | 653, 678, 780, 1642, 1814, 2777 |
| PspPPI | RGGWCCY | 2 cut(s) | 1642, 1814 |
| PspXI | VCTCGAGB | 2 cut(s) | 38, 1422 |
| PstI | CTGCAG | 2 cut(s) | 619, 778 |
| PsuI | RGATCY | 5 cut(s) | 428, 815, 878, 1140, 3101 |
| PsyI | GACNNNGTC | 1 cut(s) | 1544 |
| RsaI | GTAC | 8 cut(s) | 76, 343, 940, 1758, 1777, 1894, 2085, 2492 |
| RsaNI | GTAC | 8 cut(s) | 75, 342, 939, 1757, 1776, 1893, 2084, 2491 |
| RseI | CAYNNNNRTG | 6 cut(s) | 788, 1569, 1851, 2366, 2606, 3110 |
| SacI | GAGCTC | 2 cut(s) | 2508, 3162 |
| SaqAI | TTAA | 9 cut(s) | 530, 786, 1265, 1722, 1905, 2000, 2006, 3069, 3208 |
| SatI | GCNGC | 6 cut(s) | 348, 511, 615, 2038, 2577, 3147 |
| Sau3AI | GATC | 7 cut(s) | 321, 428, 815, 878, 1140, 1299, 3101 |
| Sau96I | GGNCC | 6 cut(s) | 653, 678, 780, 1642, 1814, 2777 |
| ScaI | AGTACT | 4 cut(s) | 76, 343, 1758, 1777 |
| SchI | GAGTC | 6 cut(s) | 50, 419, 2082, 2325, 2605, 2822 |
| ScrFI | CCNGG | 6 cut(s) | 891, 1085, 1163, 1657, 1715, 2790 |
| SduI | GDGCHC | 8 cut(s) | 27, 526, 1090, 1454, 1736, 2197, 2508, 3162 |
| SfaNI | GCATC | 5 cut(s) | 235, 346, 1599, 2320, 2802 |
| SfcI | CTRYAG | 5 cut(s) | 273, 572, 615, 774, 882 |
| Sfr274I | CTCGAG | 4 cut(s) | 38, 1422, 1633, 2876 |
| SfuI | TTCGAA | 1 cut(s) | 2185 |
| SinI | GGWCC | 3 cut(s) | 1642, 1814, 2777 |
| SlaI | CTCGAG | 4 cut(s) | 38, 1422, 1633, 2876 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 788, 1569, 1851, 2366, 2606, 3110 |
| SmlI | CTYRAG | 6 cut(s) | 38, 1422, 1633, 1940, 2501, 2876 |
| SmoI | CTYRAG | 6 cut(s) | 38, 1422, 1633, 1940, 2501, 2876 |
| SphI | GCATGC | 3 cut(s) | 374, 1015, 1927 |
| SsiI | CCGC | 5 cut(s) | 511, 1242, 1646, 2541, 3144 |
| SspI | AATATT | 2 cut(s) | 379, 1830 |
| SspMI | CTAG | 4 cut(s) | 1985, 2018, 2618, 3155 |
| SstI | GAGCTC | 2 cut(s) | 2508, 3162 |
| StyD4I | CCNGG | 6 cut(s) | 889, 1083, 1161, 1655, 1713, 2788 |
| StyI | CCWWGG | 1 cut(s) | 436 |
| TaaI | ACNGT | 6 cut(s) | 55, 576, 886, 943, 1447, 2831 |
| TaiI | ACGT | 2 cut(s) | 1025, 2892 |
| TaqI | TCGA | 7 cut(s) | 33, 39, 626, 1423, 1634, 2185, 2877 |
| TatI | WGTACW | 6 cut(s) | 74, 341, 1756, 1775, 1892, 2490 |
| TauI | GCSGC | 1 cut(s) | 513 |
| TfiI | GAWTC | 6 cut(s) | 115, 477, 1590, 2690, 3140, 3188 |
| Tru1I | TTAA | 9 cut(s) | 530, 786, 1265, 1722, 1905, 2000, 2006, 3069, 3208 |
| Tru9I | TTAA | 9 cut(s) | 530, 786, 1265, 1722, 1905, 2000, 2006, 3069, 3208 |
| TseFI | GTSAC | 6 cut(s) | 391, 854, 1441, 1546, 2443, 2608 |
| TseI | GCWGC | 5 cut(s) | 347, 614, 2037, 2576, 3146 |
| Tsp45I | GTSAC | 6 cut(s) | 391, 854, 1441, 1546, 2443, 2608 |
| TspGWI | ACGGA | 3 cut(s) | 410, 421, 2439 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1544 |
| VneI | GTGCAC | 1 cut(s) | 23 |
| VpaK11BI | GGWCC | 3 cut(s) | 1642, 1814, 2777 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 549 |
| XapI | RAATTY | 3 cut(s) | 1261, 2863, 3177 |
| XbaI | TCTAGA | 1 cut(s) | 3154 |
| XceI | RCATGY | 5 cut(s) | 374, 840, 1015, 1568, 1927 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 93, 663, 790 |
| XhoI | CTCGAG | 4 cut(s) | 38, 1422, 1633, 2876 |
| XmiI | GTMKAC | 1 cut(s) | 1503 |
| XmnI | GAANNNNTTC | 1 cut(s) | 968 |
| XspI | CTAG | 4 cut(s) | 1985, 2018, 2618, 3155 |
| ZrmI | AGTACT | 4 cut(s) | 76, 343, 1758, 1777 |