AT5G61510

Zinc-binding dehydrogenase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
24736871 .. 24739002
2132 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G61510.2

Sequence Viewer

Length: 1221 bp
ATGGCAGCATTGACTCTTCATCATCATCATCATCATCGTCATCACTCGTGTCTTCAAGCGTCTGGACATCTGTCACGTCGTCTATATCACCGAATATTCTCGAGCTTTCCACGAAATCCCGTCAAAGATCTCAACTTTCGTCTAAGTCTTGCCGATTTCTCGAGTTTTTCTTTATCTACACGTGGCACTGTGTTTGCTGTAAGAGCTCTGAGTACAGTCGCGGTAGAAGAGTCGTCCGAGAAGAAGATGGTGAAAGGGATTAGGGTTTATGAGCATGGCGGTCCTGAGGTTCTGAAATGGGAAGATGTGGAAGTAGGGGAACCAAAGGAGGGTGAGATACGTGTGAAGAACAAGGCTATCGGGCTTAACTTTATTGATGTTTACTTCAGGAAAGGTGTTTACAAGCCAGCTTCTATGCCCTTCACACCAGGTATGGAGGCTGTTGGAGAGGTGGTAGCTGTTGGGTCGGGATTGACTGGCAGAATGATCGGTGATCTCGTTGCTTATGCTGGAAATCCGATGGGTGCGTATGCTGAGGAACAAATCCTTCCAGCGGATAAAGTGGTTCCTGTTCCTTCATCTATTGATCCTATCGTTGCAGCATCAATCATGCTCAAGGGTATGACTGCACAGTTTCTCCTTCGCCGTTGCTTCAAGGTCGAACCTGGGCACACAATCCTTGTTCATGCTGCAGCTGGTGGAGTTGGGTCTCTGTTGTGTCAATGGGCAAATGCGCTTGGAGCCACTGTGATTGGAACTGTCTCGACCAATGAGAAAGCGGCTCAAGCCAAAGAAGATGGATGCCACCATGTTATTATGTACAAGAACGAGGATTTTGTTTCCCGAGTCAATGACATTACATCGGGTAAAGGAGTAAATGTTGTTTATGACTCTGTGGGAAAAGACACCTTTAAGGGATCGTTAGCATGTTTGAAGAGCCGAGGATACATGGTGAGCTTTGGACAATCCTCAGGATCTCCAGATCCGATTCCATTATCTGATCTTGCTCCAAAGTCGCTCTTCTTGACAAGACCTTCCATGATGCATTACAATGAAACTCGAGATGAGCTCTTGGAATGTGCAGGAGAGGTTTTCGCTAATGTTACCTCCGGCATCTTAAAGGCTCGTGTGAATCACAAGTACCCGTTGTCTCGAGTCGCTGACGCCCACGCAGATCTTGAGAATAGGATCACCTCTGGCTCCGTTGTGCTCTTGCCATGA

Protein Analysis

406

Amino Acids

44.02

Weight (kDa)

8.61

Isoelectric Point (pI)

36.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 53 - 135 3.1e-15 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 177 - 301 5.3e-27 Zinc-binding dehydrogenase
ADH_zinc_N_2 PF13602 210 - 347 4.4e-19 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 221
AciI CCGC 4 cut(s) 221, 279, 554, 779
AclWI GGATC 5 cut(s) 581, 925, 977, 982, 1196
AcuI CTGAAG 1 cut(s) 370
AcvI CACGTG 1 cut(s) 182
AcyI GRCGYC 1 cut(s) 1164
AfaI GTAC 3 cut(s) 214, 821, 1142
AfiI CCNNNNNNNGG 2 cut(s) 329, 553
AflIII ACRYGT 2 cut(s) 179, 340
AgsI TTSAA 3 cut(s) 56, 655, 934
AjiI CACGTC 1 cut(s) 77
AjnI CCWGG 2 cut(s) 427, 664
AluBI AGCT 7 cut(s) 105, 206, 410, 458, 695, 957, 1069
AluI AGCT 7 cut(s) 105, 206, 410, 458, 695, 957, 1069
Alw21I GWGCWC 3 cut(s) 208, 1071, 1212
Alw26I GTCTC 3 cut(s) 714, 766, 1155
AlwI GGATC 5 cut(s) 581, 925, 977, 982, 1196
Ama87I CYCGRG 5 cut(s) 100, 160, 843, 1059, 1152
ApeKI GCWGC 4 cut(s) 5, 599, 689, 692
AspLEI GCGC 1 cut(s) 736
AspS9I GGNCC 1 cut(s) 281
AsuHPI GGTGA 6 cut(s) 80, 262, 344, 503, 964, 1183
AvaI CYCGRG 5 cut(s) 100, 160, 843, 1059, 1152
AvaII GGWCC 1 cut(s) 281
AxyI CCTNAGG 2 cut(s) 285, 970
BaeGI GKGCMC 1 cut(s) 672
BanII GRGCYC 2 cut(s) 208, 1071
BauI CACGAG 2 cut(s) 46, 1125
BbrPI CACGTG 1 cut(s) 182
BbsI GAAGAC 1 cut(s) 44
Bbv12I GWGCWC 3 cut(s) 208, 1071, 1212
BbvCI CCTCAGC 1 cut(s) 534
BbvI GCAGC 4 cut(s) 17, 611, 676, 704
BccI CCATC 3 cut(s) 241, 514, 791
BceAI ACGGC 1 cut(s) 630
BcgI CGANNNNNNTGC 2 cut(s) 469, 503
BciT130I CCWGG 2 cut(s) 429, 666
BciVI GTATCC 1 cut(s) 938
BcoDI GTCTC 3 cut(s) 714, 766, 1155
BfmI CTRYAG 1 cut(s) 690
BfuI GTATCC 1 cut(s) 938
BglII AGATCT 2 cut(s) 127, 1174
BisI GCNGC 5 cut(s) 6, 600, 690, 693, 780
BlsI GCNGC 5 cut(s) 7, 601, 691, 694, 781
Bme1390I CCNGG 2 cut(s) 429, 666
Bme18I GGWCC 1 cut(s) 281
BmeT110I CYCGRG 5 cut(s) 100, 160, 843, 1059, 1152
BmgBI CACGTC 1 cut(s) 77
BmgT120I GGNCC 1 cut(s) 281
BmiI GGNNCC 4 cut(s) 321, 567, 742, 1201
BmrFI CCNGG 2 cut(s) 429, 666
BmsI GCATC 4 cut(s) 611, 791, 1032, 1122
BoxI GACNNNNGTC 1 cut(s) 70
BpiI GAAGAC 1 cut(s) 44
BplI GAGNNNNNCTC 2 cut(s) 1053, 1085
BpmI CTGGAG 1 cut(s) 963
Bpu10I CCTNAGC 1 cut(s) 534
BpuEI CTTGAG 3 cut(s) 599, 768, 1199
BsaAI YACGTR 2 cut(s) 182, 341
BsaHI GRCGYC 1 cut(s) 1164
BsaI GGTCTC 1 cut(s) 714
BsaJI CCNNGG 2 cut(s) 665, 940
BsaXI ACNNNNNCTCC 8 cut(s) 438, 468, 621, 651, 732, 762, 864, 894
Bsc4I CCNNNNNNNGG 2 cut(s) 329, 553
Bse1I ACTGG 1 cut(s) 481
Bse21I CCTNAGG 2 cut(s) 285, 970
BseBI CCWGG 2 cut(s) 429, 666
BseDI CCNNGG 2 cut(s) 665, 940
BseGI GGATG 1 cut(s) 806
BseLI CCNNNNNNNGG 2 cut(s) 329, 553
BseMII CTCAG 4 cut(s) 200, 276, 525, 984
BseNI ACTGG 1 cut(s) 481
BseSI GKGCMC 1 cut(s) 672
BseXI GCAGC 4 cut(s) 17, 611, 676, 704
BsgI GTGCAG 2 cut(s) 612, 1101
Bsh1236I CGCG 1 cut(s) 221
BsiHKAI GWGCWC 3 cut(s) 208, 1071, 1212
BsiHKCI CYCGRG 5 cut(s) 100, 160, 843, 1059, 1152
BsiSI CCGG 1 cut(s) 1110
BslI CCNNNNNNNGG 2 cut(s) 329, 553
BsmAI GTCTC 3 cut(s) 714, 766, 1155
Bso31I GGTCTC 1 cut(s) 714
BsoBI CYCGRG 5 cut(s) 100, 160, 843, 1059, 1152
Bsp1286I GDGCHC 4 cut(s) 208, 672, 1071, 1212
Bsp1407I TGTACA 1 cut(s) 819
BspACI CCGC 4 cut(s) 221, 279, 554, 779
BspCNI CTCAG 4 cut(s) 201, 277, 526, 983
BspFNI CGCG 1 cut(s) 221
BspLI GGNNCC 4 cut(s) 321, 567, 742, 1201
BspMAI CTGCAG 1 cut(s) 694
BspPI GGATC 5 cut(s) 581, 925, 977, 982, 1196
BspQI GCTCTTC 2 cut(s) 929, 1025
BspTNI GGTCTC 1 cut(s) 714
BsrGI TGTACA 1 cut(s) 819
BsrI ACTGG 1 cut(s) 481
BssECI CCNNGG 2 cut(s) 665, 940
BssNI GRCGYC 1 cut(s) 1164
BssSI CACGAG 2 cut(s) 46, 1125
Bst2BI CACGAG 2 cut(s) 46, 1125
Bst2UI CCWGG 2 cut(s) 429, 666
Bst4CI ACNGT 5 cut(s) 190, 217, 633, 748, 760
Bst6I CTCTTC 4 cut(s) 21, 222, 929, 1025
BstACI GRCGYC 1 cut(s) 1164
BstAUI TGTACA 1 cut(s) 819
BstBAI YACGTR 2 cut(s) 182, 341
BstC8I GCNNGC 1 cut(s) 408
BstDEI CTNAG 5 cut(s) 143, 209, 285, 534, 970
BstF5I GGATG 1 cut(s) 806
BstFNI CGCG 1 cut(s) 221
BstHHI GCGC 1 cut(s) 736
BstMAI GTCTC 3 cut(s) 714, 766, 1155
BstMWI GCNNNNNNNGC 3 cut(s) 203, 740, 785
BstNI CCWGG 2 cut(s) 429, 666
BstNSI RCATGY 1 cut(s) 930
BstPAI GACNNNNGTC 1 cut(s) 70
BstSCI CCNGG 2 cut(s) 427, 664
BstSFI CTRYAG 1 cut(s) 690
BstSLI GKGCMC 1 cut(s) 672
BstUI CGCG 1 cut(s) 221
BstV1I GCAGC 4 cut(s) 17, 611, 676, 704
BstV2I GAAGAC 1 cut(s) 44
BstX2I RGATCY 4 cut(s) 127, 974, 982, 1174
BstYI RGATCY 4 cut(s) 127, 974, 982, 1174
Bsu36I CCTNAGG 2 cut(s) 285, 970
BsuI GTATCC 1 cut(s) 938
BtrI CACGTC 1 cut(s) 77
BtsCI GGATG 1 cut(s) 806
BtsIMutI CAGTG 2 cut(s) 186, 744
Cac8I GCNNGC 1 cut(s) 408
CfoI GCGC 1 cut(s) 736
Cfr13I GGNCC 1 cut(s) 281
CseI GACGC 2 cut(s) 48, 1172
CsiI ACCWGGT 1 cut(s) 427
Csp6I GTAC 3 cut(s) 213, 820, 1141
CspCI CAANNNNNGTGG 2 cut(s) 733, 768
CviAII CATG 8 cut(s) 275, 610, 686, 809, 927, 949, 1039, 1218
CviQI GTAC 3 cut(s) 213, 820, 1141
DdeI CTNAG 5 cut(s) 143, 209, 285, 534, 970
Eam1104I CTCTTC 4 cut(s) 21, 222, 929, 1025
EarI CTCTTC 4 cut(s) 21, 222, 929, 1025
Ecl136II GAGCTC 2 cut(s) 206, 1069
Eco24I GRGCYC 2 cut(s) 208, 1071
Eco31I GGTCTC 1 cut(s) 714
Eco47I GGWCC 1 cut(s) 281
Eco53kI GAGCTC 2 cut(s) 206, 1069
Eco57I CTGAAG 1 cut(s) 370
Eco72I CACGTG 1 cut(s) 182
Eco81I CCTNAGG 2 cut(s) 285, 970
Eco88I CYCGRG 5 cut(s) 100, 160, 843, 1059, 1152
EcoICRI GAGCTC 2 cut(s) 206, 1069
EcoRII CCWGG 2 cut(s) 427, 664
EcoT22I ATGCAT 1 cut(s) 1047
EcoT38I GRGCYC 2 cut(s) 208, 1071
FaeI CATG 8 cut(s) 278, 613, 689, 812, 930, 952, 1042, 1221
FalI AAGNNNNNCTT 2 cut(s) 1004, 1036
FatI CATG 8 cut(s) 274, 609, 685, 808, 926, 948, 1038, 1217
Fnu4HI GCNGC 5 cut(s) 6, 600, 690, 693, 780
FokI GGATG 1 cut(s) 813
FriOI GRGCYC 2 cut(s) 208, 1071
Fsp4HI GCNGC 5 cut(s) 6, 600, 690, 693, 780
GlaI GCGC 1 cut(s) 735
GluI GCNGC 5 cut(s) 6, 600, 690, 693, 780
GsuI CTGGAG 1 cut(s) 963
HapII CCGG 1 cut(s) 1110
HgaI GACGC 2 cut(s) 48, 1172
HhaI GCGC 1 cut(s) 736
Hin1I GRCGYC 1 cut(s) 1164
Hin1II CATG 8 cut(s) 278, 613, 689, 812, 930, 952, 1042, 1221
Hin6I GCGC 1 cut(s) 734
HinP1I GCGC 1 cut(s) 734
HinfI GANTC 7 cut(s) 13, 230, 846, 890, 988, 1132, 1155
HpaII CCGG 1 cut(s) 1110
HphI GGTGA 6 cut(s) 80, 262, 344, 503, 964, 1183
Hpy166II GTNNAC 2 cut(s) 382, 400
Hpy188I TCNGA 6 cut(s) 210, 238, 294, 519, 987, 1000
Hpy8I GTNNAC 2 cut(s) 382, 400
Hpy99I CGWCG 1 cut(s) 81
HpyAV CCTTC 5 cut(s) 430, 557, 585, 650, 1044
HpyCH4III ACNGT 5 cut(s) 190, 217, 633, 748, 760
HpyCH4IV ACGT 3 cut(s) 76, 181, 340
HpyCH4V TGCA 5 cut(s) 599, 629, 692, 1045, 1082
HpyF10VI GCNNNNNNNGC 3 cut(s) 203, 740, 785
HpyF3I CTNAG 5 cut(s) 143, 209, 285, 534, 970
HpySE526I ACGT 3 cut(s) 76, 181, 340
Hsp92I GRCGYC 1 cut(s) 1164
Hsp92II CATG 8 cut(s) 278, 613, 689, 812, 930, 952, 1042, 1221
HspAI GCGC 1 cut(s) 734
LguI GCTCTTC 2 cut(s) 929, 1025
LmnI GCTCC 3 cut(s) 740, 1012, 1205
Lsp1109I GCAGC 4 cut(s) 17, 611, 676, 704
LweI GCATC 4 cut(s) 611, 791, 1032, 1122
MabI ACCWGGT 1 cut(s) 427
MaeII ACGT 3 cut(s) 76, 181, 340
MaeIII GTNAC 2 cut(s) 72, 1102
MflI RGATCY 4 cut(s) 127, 974, 982, 1174
MhlI GDGCHC 4 cut(s) 208, 672, 1071, 1212
MlyI GAGTC 5 cut(s) 7, 239, 855, 884, 1164
MmeI TCCRAC 1 cut(s) 424
Mph1103I ATGCAT 1 cut(s) 1047
MseI TTAA 3 cut(s) 366, 912, 1118
MslI CAYNNNNRTG 1 cut(s) 1050
MspA1I CMGCKG 2 cut(s) 554, 695
MspI CCGG 1 cut(s) 1110
MspR9I CCNGG 2 cut(s) 429, 666
MvaI CCWGG 2 cut(s) 429, 666
MvnI CGCG 1 cut(s) 221
MwoI GCNNNNNNNGC 3 cut(s) 203, 740, 785
NlaIII CATG 8 cut(s) 278, 613, 689, 812, 930, 952, 1042, 1221
NlaIV GGNNCC 4 cut(s) 321, 567, 742, 1201
NmeAIII GCCGAG 1 cut(s) 965
NmuCI GTSAC 1 cut(s) 72
NsiI ATGCAT 1 cut(s) 1047
NspI RCATGY 1 cut(s) 930
PaeR7I CTCGAG 4 cut(s) 100, 160, 1059, 1152
PciSI GCTCTTC 2 cut(s) 929, 1025
PcsI WCGNNNNNNNCGW 1 cut(s) 495
PfeI GAWTC 2 cut(s) 988, 1132
PkrI GCNGC 5 cut(s) 7, 601, 691, 694, 781
PleI GAGTC 5 cut(s) 7, 238, 854, 884, 1163
PmaCI CACGTG 1 cut(s) 182
PmlI CACGTG 1 cut(s) 182
PpsI GAGTC 5 cut(s) 7, 238, 854, 884, 1163
Ppu21I YACGTR 2 cut(s) 182, 341
PshAI GACNNNNGTC 1 cut(s) 70
Psp124BI GAGCTC 2 cut(s) 208, 1071
Psp6I CCWGG 2 cut(s) 427, 664
PspCI CACGTG 1 cut(s) 182
PspGI CCWGG 2 cut(s) 427, 664
PspN4I GGNNCC 4 cut(s) 321, 567, 742, 1201
PspPI GGNCC 1 cut(s) 281
PstI CTGCAG 1 cut(s) 694
PsuI RGATCY 4 cut(s) 127, 974, 982, 1174
PvuII CAGCTG 1 cut(s) 695
RsaI GTAC 3 cut(s) 214, 821, 1142
RsaNI GTAC 3 cut(s) 213, 820, 1141
RseI CAYNNNNRTG 1 cut(s) 1050
SacI GAGCTC 2 cut(s) 208, 1071
SapI GCTCTTC 2 cut(s) 929, 1025
SaqAI TTAA 3 cut(s) 366, 912, 1118
SatI GCNGC 5 cut(s) 6, 600, 690, 693, 780
Sau96I GGNCC 1 cut(s) 281
SchI GAGTC 5 cut(s) 7, 239, 855, 884, 1164
ScrFI CCNGG 2 cut(s) 429, 666
SduI GDGCHC 4 cut(s) 208, 672, 1071, 1212
SexAI ACCWGGT 1 cut(s) 427
SfaNI GCATC 4 cut(s) 611, 791, 1032, 1122
SfcI CTRYAG 1 cut(s) 690
Sfr274I CTCGAG 4 cut(s) 100, 160, 1059, 1152
SinI GGWCC 1 cut(s) 281
SlaI CTCGAG 4 cut(s) 100, 160, 1059, 1152
SmiMI CAYNNNNRTG 1 cut(s) 1050
SmlI CTYRAG 7 cut(s) 100, 160, 614, 783, 1059, 1152, 1178
SmoI CTYRAG 7 cut(s) 100, 160, 614, 783, 1059, 1152, 1178
SsiI CCGC 4 cut(s) 221, 279, 554, 779
SspI AATATT 1 cut(s) 96
SstI GAGCTC 2 cut(s) 208, 1071
StyD4I CCNGG 2 cut(s) 427, 664
TaaI ACNGT 5 cut(s) 190, 217, 633, 748, 760
TaiI ACGT 3 cut(s) 79, 184, 343
TaqI TCGA 6 cut(s) 101, 161, 660, 764, 1060, 1153
TatI WGTACW 2 cut(s) 212, 819
TauI GCSGC 1 cut(s) 782
TfiI GAWTC 2 cut(s) 988, 1132
Tru1I TTAA 3 cut(s) 366, 912, 1118
Tru9I TTAA 3 cut(s) 366, 912, 1118
TscAI CASTG 2 cut(s) 193, 751
TseFI GTSAC 1 cut(s) 72
TseI GCWGC 4 cut(s) 5, 599, 689, 692
Tsp45I GTSAC 1 cut(s) 72
TspDTI ATGAA 4 cut(s) 8, 567, 674, 1068
TspGWI ACGGA 1 cut(s) 1192
TspRI CASTG 2 cut(s) 193, 751
VpaK11BI GGWCC 1 cut(s) 281
XceI RCATGY 1 cut(s) 930
XhoI CTCGAG 4 cut(s) 100, 160, 1059, 1152
Zsp2I ATGCAT 1 cut(s) 1047
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.