Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0001661

Physical Location & Seq

Genomic Coordinates Reverse (-)

27673787 .. 27677776

Gene Structure 3990 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G274600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 975 bp

ATGGTCAAAGCCATTCGAGTCCATGAGCTTGGTGGACCTGAGGTCTTGAAATGGGAAGATGTGGAAGTAGGAGAGCCAAAGGAGGGAGAGGTTCGTGTGAAGAACAAGGCCATTGGGCTTAATTTCGTTGATGTATACTTCCGCAAAGGCGTTTATAAGGCTGCTACAGTCCCCTACATCCCAGGTGTTGAGGCTTGTGGAGTTGTGACAGCTGTGGGACCGGGACTAACAGGCAGGCAAGTTGGAGATCTTGTAGCCTATGCTGGTCAGCCAATGGGCTCATATGCGGAAGAGCAGATCCTTCCTGCAAACAGAATTGTGCCTGTTCCTCCTTCCATTGATCCTACTGTTGCTGCATCCCTCTTGCTCAAGGGTATGACAGCTCAGTTTCTACTACGCAGTTGTTTCAAGGTTGAACCTGGACACACAGTCCTTGTCCATGCAGCAGCTGGTGGAGTTGGATCCCTTTTATGCCAGTGGGCTAATGCCCTTGGTGCCACTGTCATTGGAACTGTATCTACTAAAGAGAAGGCAGCTCAAGCCAAGGAGGATGGATGTCACTATGTCATAATCTATAAGGAAGAGGACTTTGTTGCTCGAGTGAAAGAAATAACATCTGACAATGGGGTCGAGGTTGTTTATGATTCTGTTGGGAAGGATACTTTCGAGGGATCACTGGCATGCTTGAAGACTCGTGGATACATGGTGAGTTTTGGGCAGTCATCAGGTGCGCCAGATCCGGTTCCATTGTCAGCCATTGCAGTGAAGTCACTGTTCTTGACTAGGCCTAGACTCTTTAATTACGCTGTAACTCGAGATGAATTGCTAGGGATGGCGGGAGAGGTATTTGGTAATGTTCAATCAGGTGTATTGCGGGTTCGAGTAAATCACACCTACCCATTGTCTCAAGCAGCACAGGCACACGAAGACCTTGAGAATAGGAAAACATCTGGATCTGTTGTGCTTATCCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0003960 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009653 GO:0009664 GO:0009826 GO:0009827 GO:0009828 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0016491 GO:0016651 GO:0016655 GO:0017091 GO:0030312 GO:0032502 GO:0032989 GO:0033554 GO:0034599 GO:0040007 GO:0042221 GO:0042545 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0048589 GO:0048856 GO:0048869 GO:0050896 GO:0051716 GO:0055114 GO:0060560 GO:0070887 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0071944 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

325

Amino Acids

34.54

Weight (kDa)

6.33

Isoelectric Point (pI)

33.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001661)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61510 AT5G61510
fragaria_vesca	FvH4_7g27132 FvH4_7g27132 FvH4_7g27132 FvH4_7g27132 FvH4_7g27140
malus_domestica	MD01G1178400.v1.1 MD01G1179500.v1.1 MD01G1180600.v1.1 MD07G1250800.v1.1 MD07G1251000.v1.1
prunus_persica	Prupe.2G133300_v2.0.a1 Prupe.2G133300_v2.0.a1 Prupe.2G274500_v2.0.a1 Prupe.2G274600_v2.0.a1
pyrus_communis	pycom01g18920 pycom01g19010 pycom01g19080 pycom07g22370
rosa_chinensis	RchiOBHm_Chr1g0363511 RchiOBHm_Chr1g0373931 RchiOBHm_Chr1g0373941
rosa_laevigata	RLG00000026793 RLG00000026794 RLG00000027560
rosa_multiflora	Rmu_sc0002022.1_g000001 Rmu_sc0002740.1_g000012 Rmu_sc0008820.1_g000007
rosa_roxburghii	Rroxscaffold_4G00283890 Rroxscaffold_4G00293100
rosa_rugosa	Rorug01G0308000 Rorug01G0379800 Rorug01G0379900
rosa_samantha	Rh1AG316700 Rh1AG390100 Rh1AG390200 Rh1BG280100 Rh1BG354400 Rh1BG354500 Rh1CG296200 Rh1CG367500 Rh1CG367600 Rh1DG311300 Rh1DG385100 Rh1DG385200
rosa_wichuraiana	Rw1G028070 Rw1G034500 Rw1G034510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	156
AasI	GACNNNNNNGTC	1 cut(s)	626
AccB1I	GGYRCC	1 cut(s)	494
AccI	GTMKAC	1 cut(s)	135
AciI	CCGC	4 cut(s)	142, 287, 836, 874
AclWI	GGATC	7 cut(s)	292, 335, 456, 469, 679, 731, 961
AfiI	CCNNNNNNNGG	1 cut(s)	83
AgsI	TTSAA	5 cut(s)	49, 409, 416, 688, 860
AhdI	GACNNNNNGTC	2 cut(s)	41, 428
AjnI	CCWGG	2 cut(s)	181, 418
AluBI	AGCT	5 cut(s)	28, 212, 383, 449, 536
AluI	AGCT	5 cut(s)	28, 212, 383, 449, 536
Alw26I	GTCTC	1 cut(s)	909
AlwI	GGATC	7 cut(s)	292, 335, 456, 469, 679, 731, 961
AlwNI	CAGNNNCTG	1 cut(s)	449
Ama87I	CYCGRG	2 cut(s)	597, 813
AoxI	GGCC	2 cut(s)	108, 785
ApeKI	GCWGC	6 cut(s)	161, 353, 443, 446, 533, 911
AspLEI	GCGC	1 cut(s)	733
AspS9I	GGNCC	2 cut(s)	35, 218
AsuC2I	CCSGG	1 cut(s)	222
AsuHPI	GGTGA	1 cut(s)	718
AvaI	CYCGRG	2 cut(s)	597, 813
AvaII	GGWCC	2 cut(s)	35, 218
AxyI	CCTNAGG	1 cut(s)	39
BamHI	GGATCC	1 cut(s)	461
BanI	GGYRCC	1 cut(s)	494
BanII	GRGCYC	1 cut(s)	281
BauI	CACGAG	1 cut(s)	693
BbsI	GAAGAC	2 cut(s)	695, 933
BbvI	GCAGC	6 cut(s)	148, 340, 455, 458, 545, 923
BccI	CCATC	2 cut(s)	545, 826
BciT130I	CCWGG	2 cut(s)	183, 420
BciVI	GTATCC	2 cut(s)	652, 692
BcnI	CCSGG	1 cut(s)	222
BcoDI	GTCTC	1 cut(s)	909
BfaI	CTAG	3 cut(s)	783, 789, 827
BfmI	CTRYAG	1 cut(s)	165
BfuI	GTATCC	2 cut(s)	652, 692
BglII	AGATCT	1 cut(s)	247
BisI	GCNGC	6 cut(s)	162, 354, 444, 447, 534, 912
BlsI	GCNGC	6 cut(s)	163, 355, 445, 448, 535, 913
Bme1390I	CCNGG	3 cut(s)	183, 222, 420
Bme18I	GGWCC	2 cut(s)	35, 218
BmeRI	GACNNNNNGTC	2 cut(s)	41, 428
BmeT110I	CYCGRG	2 cut(s)	597, 813
BmgT120I	GGNCC	2 cut(s)	35, 218
BmiI	GGNNCC	4 cut(s)	219, 463, 496, 744
BmrFI	CCNGG	3 cut(s)	183, 222, 420
BmsI	GCATC	1 cut(s)	365
BpiI	GAAGAC	2 cut(s)	695, 933
BpuEI	CTTGAG	4 cut(s)	353, 522, 891, 953
BpuMI	CCSGG	1 cut(s)	222
BsaJI	CCNNGG	3 cut(s)	181, 490, 543
BsaWI	WCCGGW	1 cut(s)	739
BsaXI	ACNNNNNCTCC	2 cut(s)	237, 267
Bsc4I	CCNNNNNNNGG	1 cut(s)	83
Bse1I	ACTGG	2 cut(s)	475, 681
Bse21I	CCTNAGG	1 cut(s)	39
Bse3DI	GCAATG	1 cut(s)	756
BseBI	CCWGG	2 cut(s)	183, 420
BseDI	CCNNGG	3 cut(s)	181, 490, 543
BseGI	GGATG	5 cut(s)	177, 356, 556, 560, 837
BseLI	CCNNNNNNNGG	1 cut(s)	83
BseMI	GCAATG	1 cut(s)	756
BseMII	CTCAG	2 cut(s)	30, 398
BseNI	ACTGG	2 cut(s)	475, 681
BseXI	GCAGC	6 cut(s)	148, 340, 455, 458, 545, 923
BshFI	GGCC	2 cut(s)	110, 787
BshNI	GGYRCC	1 cut(s)	494
BsiHKCI	CYCGRG	2 cut(s)	597, 813
BsiSI	CCGG	2 cut(s)	221, 740
BslFI	GGGAC	3 cut(s)	155, 231, 237
BslI	CCNNNNNNNGG	1 cut(s)	83
BsmAI	GTCTC	1 cut(s)	909
BsmFI	GGGAC	3 cut(s)	155, 231, 237
BsnI	GGCC	2 cut(s)	110, 787
BsoBI	CYCGRG	2 cut(s)	597, 813
Bsp1286I	GDGCHC	1 cut(s)	281
Bsp143I	GATC	7 cut(s)	247, 297, 340, 461, 671, 736, 953
BspACI	CCGC	4 cut(s)	142, 287, 836, 874
BspANI	GGCC	2 cut(s)	110, 787
BspCNI	CTCAG	2 cut(s)	31, 397
BspLI	GGNNCC	4 cut(s)	219, 463, 496, 744
BspPI	GGATC	7 cut(s)	292, 335, 456, 469, 679, 731, 961
BspQI	GCTCTTC	1 cut(s)	285
BspT107I	GGYRCC	1 cut(s)	494
BsrDI	GCAATG	1 cut(s)	756
BsrI	ACTGG	2 cut(s)	475, 681
BssECI	CCNNGG	3 cut(s)	181, 490, 543
BssMI	GATC	7 cut(s)	247, 297, 340, 461, 671, 736, 953
BssNAI	GTATAC	1 cut(s)	136
BssSI	CACGAG	1 cut(s)	693
BssT1I	CCWWGG	2 cut(s)	490, 543
Bst1107I	GTATAC	1 cut(s)	136
Bst2BI	CACGAG	1 cut(s)	693
Bst2UI	CCWGG	2 cut(s)	183, 420
Bst4CI	ACNGT	6 cut(s)	169, 349, 430, 502, 514, 774
Bst6I	CTCTTC	2 cut(s)	285, 576
BstC8I	GCNNGC	2 cut(s)	236, 682
BstDEI	CTNAG	2 cut(s)	39, 384
BstF5I	GGATG	5 cut(s)	177, 356, 556, 560, 837
BstHHI	GCGC	1 cut(s)	733
BstKTI	GATC	7 cut(s)	250, 300, 343, 464, 674, 739, 956
BstMAI	GTCTC	1 cut(s)	909
BstMBI	GATC	7 cut(s)	247, 297, 340, 461, 671, 736, 953
BstMWI	GCNNNNNNNGC	3 cut(s)	494, 539, 917
BstNI	CCWGG	2 cut(s)	183, 420
BstNSI	RCATGY	1 cut(s)	684
BstSCI	CCNGG	3 cut(s)	181, 220, 418
BstSFI	CTRYAG	1 cut(s)	165
BstV1I	GCAGC	6 cut(s)	148, 340, 455, 458, 545, 923
BstV2I	GAAGAC	2 cut(s)	695, 933
BstX2I	RGATCY	5 cut(s)	247, 297, 461, 736, 953
BstXI	CCANNNNNNTGG	1 cut(s)	29
BstYI	RGATCY	5 cut(s)	247, 297, 461, 736, 953
BstZ17I	GTATAC	1 cut(s)	136
Bsu36I	CCTNAGG	1 cut(s)	39
BsuI	GTATCC	2 cut(s)	652, 692
BsuRI	GGCC	2 cut(s)	110, 787
BtsCI	GGATG	5 cut(s)	177, 356, 556, 560, 837
BtsI	GCAGTG	1 cut(s)	768
BtsIMutI	CAGTG	5 cut(s)	482, 498, 674, 768, 770
Cac8I	GCNNGC	2 cut(s)	236, 682
CaiI	CAGNNNCTG	1 cut(s)	449
CfoI	GCGC	1 cut(s)	733
Cfr13I	GGNCC	2 cut(s)	35, 218
CspCI	CAANNNNNGTGG	2 cut(s)	487, 522
CviAII	CATG	4 cut(s)	23, 440, 681, 703
DdeI	CTNAG	2 cut(s)	39, 384
DpnI	GATC	7 cut(s)	249, 299, 342, 463, 673, 738, 955
DpnII	GATC	7 cut(s)	247, 297, 340, 461, 671, 736, 953
DrdI	GACNNNNNNGTC	1 cut(s)	626
DriI	GACNNNNNGTC	2 cut(s)	41, 428
DseDI	GACNNNNNNGTC	1 cut(s)	626
Eam1104I	CTCTTC	2 cut(s)	285, 576
Eam1105I	GACNNNNNGTC	2 cut(s)	41, 428
EarI	CTCTTC	2 cut(s)	285, 576
Eco130I	CCWWGG	2 cut(s)	490, 543
Eco147I	AGGCCT	1 cut(s)	787
Eco24I	GRGCYC	1 cut(s)	281
Eco47I	GGWCC	2 cut(s)	35, 218
Eco81I	CCTNAGG	1 cut(s)	39
Eco88I	CYCGRG	2 cut(s)	597, 813
EcoRII	CCWGG	2 cut(s)	181, 418
EcoT14I	CCWWGG	2 cut(s)	490, 543
EcoT38I	GRGCYC	1 cut(s)	281
ErhI	CCWWGG	2 cut(s)	490, 543
FaeI	CATG	4 cut(s)	26, 443, 684, 706
FaqI	GGGAC	3 cut(s)	155, 231, 237
FatI	CATG	4 cut(s)	22, 439, 680, 702
FauI	CCCGC	2 cut(s)	829, 867
FauNDI	CATATG	1 cut(s)	283
FblI	GTMKAC	1 cut(s)	135
Fnu4HI	GCNGC	6 cut(s)	162, 354, 444, 447, 534, 912
FokI	GGATG	5 cut(s)	164, 343, 563, 567, 844
FriOI	GRGCYC	1 cut(s)	281
Fsp4HI	GCNGC	6 cut(s)	162, 354, 444, 447, 534, 912
FspBI	CTAG	3 cut(s)	783, 789, 827
GlaI	GCGC	1 cut(s)	732
GluI	GCNGC	6 cut(s)	162, 354, 444, 447, 534, 912
HaeIII	GGCC	2 cut(s)	110, 787
HapII	CCGG	2 cut(s)	221, 740
HhaI	GCGC	1 cut(s)	733
Hin1II	CATG	4 cut(s)	26, 443, 684, 706
Hin6I	GCGC	1 cut(s)	731
HinP1I	GCGC	1 cut(s)	731
HinfI	GANTC	4 cut(s)	18, 644, 691, 792
HpaII	CCGG	2 cut(s)	221, 740
HphI	GGTGA	1 cut(s)	718
Hpy166II	GTNNAC	2 cut(s)	35, 136
Hpy188I	TCNGA	1 cut(s)	619
Hpy188III	TCNNGA	4 cut(s)	46, 778, 815, 951
Hpy8I	GTNNAC	2 cut(s)	35, 136
HpyAV	CCTTC	4 cut(s)	311, 342, 523, 649
HpyCH4III	ACNGT	6 cut(s)	169, 349, 430, 502, 514, 774
HpyCH4V	TGCA	4 cut(s)	308, 356, 443, 761
HpyF10VI	GCNNNNNNNGC	3 cut(s)	494, 539, 917
HpyF3I	CTNAG	2 cut(s)	39, 384
Hsp92II	CATG	4 cut(s)	26, 443, 684, 706
HspAI	GCGC	1 cut(s)	731
Kzo9I	GATC	7 cut(s)	247, 297, 340, 461, 671, 736, 953
LguI	GCTCTTC	1 cut(s)	285
Lsp1109I	GCAGC	6 cut(s)	148, 340, 455, 458, 545, 923
LweI	GCATC	1 cut(s)	365
MaeI	CTAG	3 cut(s)	783, 789, 827
MaeIII	GTNAC	4 cut(s)	205, 557, 768, 808
MalI	GATC	7 cut(s)	249, 299, 342, 463, 673, 738, 955
MboI	GATC	7 cut(s)	247, 297, 340, 461, 671, 736, 953
MboII	GAAGA	6 cut(s)	68, 112, 302, 593, 700, 938
MflI	RGATCY	5 cut(s)	247, 297, 461, 736, 953
MhlI	GDGCHC	1 cut(s)	281
MluCI	AATT	4 cut(s)	121, 315, 799, 821
MlyI	GAGTC	3 cut(s)	27, 685, 786
MmeI	TCCRAC	2 cut(s)	223, 439
MseI	TTAA	2 cut(s)	120, 798
MslI	CAYNNNNRTG	2 cut(s)	679, 761
MspA1I	CMGCKG	2 cut(s)	212, 449
MspI	CCGG	2 cut(s)	221, 740
MspR9I	CCNGG	3 cut(s)	183, 222, 420
MvaI	CCWGG	2 cut(s)	183, 420
MwoI	GCNNNNNNNGC	3 cut(s)	494, 539, 917
NciI	CCSGG	1 cut(s)	222
NdeI	CATATG	1 cut(s)	283
NdeII	GATC	7 cut(s)	247, 297, 340, 461, 671, 736, 953
NlaIII	CATG	4 cut(s)	26, 443, 684, 706
NlaIV	GGNNCC	4 cut(s)	219, 463, 496, 744
NmuCI	GTSAC	3 cut(s)	205, 557, 768
NspI	RCATGY	1 cut(s)	684
PaeI	GCATGC	1 cut(s)	684
PaeR7I	CTCGAG	2 cut(s)	597, 813
PceI	AGGCCT	1 cut(s)	787
PciSI	GCTCTTC	1 cut(s)	285
PfeI	GAWTC	1 cut(s)	644
PkrI	GCNGC	6 cut(s)	163, 355, 445, 448, 535, 913
PleI	GAGTC	3 cut(s)	26, 685, 786
PpsI	GAGTC	3 cut(s)	26, 685, 786
PsiI	TTATAA	1 cut(s)	156
Psp6I	CCWGG	2 cut(s)	181, 418
PspGI	CCWGG	2 cut(s)	181, 418
PspN4I	GGNNCC	4 cut(s)	219, 463, 496, 744
PspPI	GGNCC	2 cut(s)	35, 218
PspXI	VCTCGAGB	1 cut(s)	597
PsrI	GAACNNNNNNTAC	4 cut(s)	502, 534, 861, 893
PstNI	CAGNNNCTG	1 cut(s)	449
PsuI	RGATCY	5 cut(s)	247, 297, 461, 736, 953
PvuII	CAGCTG	2 cut(s)	212, 449
RseI	CAYNNNNRTG	2 cut(s)	679, 761
SapI	GCTCTTC	1 cut(s)	285
SaqAI	TTAA	2 cut(s)	120, 798
SatI	GCNGC	6 cut(s)	162, 354, 444, 447, 534, 912
Sau3AI	GATC	7 cut(s)	247, 297, 340, 461, 671, 736, 953
Sau96I	GGNCC	2 cut(s)	35, 218
SchI	GAGTC	3 cut(s)	27, 685, 786
ScrFI	CCNGG	3 cut(s)	183, 222, 420
SduI	GDGCHC	1 cut(s)	281
SfaNI	GCATC	1 cut(s)	365
SfcI	CTRYAG	1 cut(s)	165
Sfr274I	CTCGAG	2 cut(s)	597, 813
SinI	GGWCC	2 cut(s)	35, 218
SlaI	CTCGAG	2 cut(s)	597, 813
SmiMI	CAYNNNNRTG	2 cut(s)	679, 761
SmlI	CTYRAG	6 cut(s)	368, 537, 597, 813, 906, 932
SmoI	CTYRAG	6 cut(s)	368, 537, 597, 813, 906, 932
SphI	GCATGC	1 cut(s)	684
Sse9I	AATT	4 cut(s)	121, 315, 799, 821
SseBI	AGGCCT	1 cut(s)	787
SsiI	CCGC	4 cut(s)	142, 287, 836, 874
SspMI	CTAG	3 cut(s)	783, 789, 827
StuI	AGGCCT	1 cut(s)	787
StyD4I	CCNGG	3 cut(s)	181, 220, 418
StyI	CCWWGG	2 cut(s)	490, 543
TaaI	ACNGT	6 cut(s)	169, 349, 430, 502, 514, 774
TaqI	TCGA	6 cut(s)	16, 598, 630, 666, 814, 880
TasI	AATT	4 cut(s)	121, 315, 799, 821
TfiI	GAWTC	1 cut(s)	644
Tru1I	TTAA	2 cut(s)	120, 798
Tru9I	TTAA	2 cut(s)	120, 798
TscAI	CASTG	5 cut(s)	482, 505, 681, 768, 777
TseFI	GTSAC	3 cut(s)	205, 557, 768
TseI	GCWGC	6 cut(s)	161, 353, 443, 446, 533, 911
Tsp45I	GTSAC	3 cut(s)	205, 557, 768
TspDTI	ATGAA	1 cut(s)	834
TspRI	CASTG	5 cut(s)	482, 505, 681, 768, 777
VpaK11BI	GGWCC	2 cut(s)	35, 218
XceI	RCATGY	1 cut(s)	684
XcmI	CCANNNNNNNNNTGG	2 cut(s)	29, 446
XhoI	CTCGAG	2 cut(s)	597, 813
XmiI	GTMKAC	1 cut(s)	135
XspI	CTAG	3 cut(s)	783, 789, 827

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.