quinone oxidoreductase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G61510 AT5G61510 |
| fragaria_vesca | FvH4_7g27132 FvH4_7g27132 FvH4_7g27132 FvH4_7g27132 FvH4_7g27140 |
| malus_domestica | MD01G1178400.v1.1 MD01G1179500.v1.1 MD01G1180600.v1.1 MD07G1250800.v1.1 MD07G1251000.v1.1 |
| prunus_persica | Prupe.2G133300_v2.0.a1 Prupe.2G133300_v2.0.a1 Prupe.2G274500_v2.0.a1 Prupe.2G274600_v2.0.a1 |
| pyrus_communis | pycom01g18920 pycom01g19010 pycom01g19080 pycom07g22370 |
| rosa_chinensis | RchiOBHm_Chr1g0363511 RchiOBHm_Chr1g0373931 RchiOBHm_Chr1g0373941 |
| rosa_laevigata | RLG00000026793 RLG00000026794 RLG00000027560 |
| rosa_multiflora | Rmu_sc0002022.1_g000001 Rmu_sc0002740.1_g000012 Rmu_sc0008820.1_g000007 |
| rosa_roxburghii | Rroxscaffold_4G00283890 Rroxscaffold_4G00293100 |
| rosa_rugosa | Rorug01G0308000 Rorug01G0379800 Rorug01G0379900 |
| rosa_samantha | Rh1AG316700 Rh1AG390100 Rh1AG390200 Rh1BG280100 Rh1BG354400 Rh1BG354500 Rh1CG296200 Rh1CG367500 Rh1CG367600 Rh1DG311300 Rh1DG385100 Rh1DG385200 |
| rosa_wichuraiana | Rw1G028070 Rw1G034500 Rw1G034510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 384 |
| Acc16I | TGCGCA | 1 cut(s) | 516 |
| AccI | GTMKAC | 1 cut(s) | 867 |
| AccII | CGCG | 2 cut(s) | 33, 324 |
| AciI | CCGC | 7 cut(s) | 31, 33, 71, 370, 628, 1062, 1102 |
| AclWI | GGATC | 7 cut(s) | 520, 563, 684, 697, 907, 959, 1189 |
| AcsI | RAATTY | 2 cut(s) | 101, 937 |
| AcuI | CTGAAG | 2 cut(s) | 219, 1155 |
| AfaI | GTAC | 2 cut(s) | 365, 604 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 311, 385, 852 |
| AflII | CTTAAG | 1 cut(s) | 596 |
| AgsI | TTSAA | 3 cut(s) | 277, 637, 860 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 656 |
| AjiI | CACGTC | 1 cut(s) | 793 |
| AjnI | CCWGG | 4 cut(s) | 155, 409, 448, 646 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 1173 |
| AluBI | AGCT | 5 cut(s) | 440, 545, 611, 677, 983 |
| AluI | AGCT | 5 cut(s) | 440, 545, 611, 677, 983 |
| AlwI | GGATC | 7 cut(s) | 520, 563, 684, 697, 907, 959, 1189 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 88, 677 |
| Ama87I | CYCGRG | 1 cut(s) | 1041 |
| AoxI | GGCC | 6 cut(s) | 262, 336, 376, 768, 1013, 1059 |
| ApoI | RAATTY | 2 cut(s) | 101, 937 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 800, 832 |
| AseI | ATTAAT | 1 cut(s) | 348 |
| AspLEI | GCGC | 2 cut(s) | 517, 961 |
| AspS9I | GGNCC | 4 cut(s) | 159, 263, 376, 446 |
| AsuHPI | GGTGA | 2 cut(s) | 204, 946 |
| AvaI | CYCGRG | 1 cut(s) | 1041 |
| AvaII | GGWCC | 2 cut(s) | 159, 446 |
| AxyI | CCTNAGG | 1 cut(s) | 267 |
| BamHI | GGATCC | 1 cut(s) | 689 |
| BanII | GRGCYC | 1 cut(s) | 509 |
| BauI | CACGAG | 1 cut(s) | 825 |
| BccI | CCATC | 4 cut(s) | 223, 248, 347, 773 |
| BciT130I | CCWGG | 4 cut(s) | 157, 411, 450, 648 |
| BciVI | GTATCC | 1 cut(s) | 880 |
| BfaI | CTAG | 2 cut(s) | 1017, 1201 |
| BfmI | CTRYAG | 1 cut(s) | 876 |
| BfrI | CTTAAG | 1 cut(s) | 596 |
| BfuI | GTATCC | 1 cut(s) | 880 |
| BglII | AGATCT | 1 cut(s) | 475 |
| Bme1390I | CCNGG | 4 cut(s) | 157, 411, 450, 648 |
| Bme18I | GGWCC | 2 cut(s) | 159, 446 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 656 |
| BmeT110I | CYCGRG | 1 cut(s) | 1041 |
| BmgBI | CACGTC | 1 cut(s) | 793 |
| BmgT120I | GGNCC | 4 cut(s) | 159, 263, 376, 446 |
| BmiI | GGNNCC | 6 cut(s) | 96, 161, 303, 447, 691, 972 |
| BmrFI | CCNGG | 4 cut(s) | 157, 411, 450, 648 |
| BmsI | GCATC | 4 cut(s) | 30, 218, 773, 1097 |
| BpuEI | CTTGAG | 1 cut(s) | 1181 |
| BsaJI | CCNNGG | 4 cut(s) | 31, 409, 718, 771 |
| BsaWI | WCCGGW | 1 cut(s) | 967 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 465, 495 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 311, 385, 852 |
| Bse1I | ACTGG | 3 cut(s) | 82, 703, 909 |
| Bse21I | CCTNAGG | 1 cut(s) | 267 |
| BseBI | CCWGG | 4 cut(s) | 157, 411, 450, 648 |
| BseDI | CCNNGG | 4 cut(s) | 31, 409, 718, 771 |
| BseGI | GGATG | 5 cut(s) | 21, 240, 784, 788, 842 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 311, 385, 852 |
| BseMII | CTCAG | 2 cut(s) | 258, 626 |
| BseNI | ACTGG | 3 cut(s) | 82, 703, 909 |
| Bsh1236I | CGCG | 2 cut(s) | 33, 324 |
| BshFI | GGCC | 6 cut(s) | 264, 338, 378, 770, 1015, 1061 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1041 |
| BsiSI | CCGG | 2 cut(s) | 126, 968 |
| BslFI | GGGAC | 2 cut(s) | 459, 751 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 311, 385, 852 |
| BsmFI | GGGAC | 2 cut(s) | 459, 751 |
| BsnI | GGCC | 6 cut(s) | 264, 338, 378, 770, 1015, 1061 |
| BsoBI | CYCGRG | 1 cut(s) | 1041 |
| Bsp1286I | GDGCHC | 1 cut(s) | 509 |
| Bsp143I | GATC | 9 cut(s) | 167, 185, 475, 525, 568, 689, 899, 964, 1181 |
| BspACI | CCGC | 7 cut(s) | 31, 33, 71, 370, 628, 1062, 1102 |
| BspANI | GGCC | 6 cut(s) | 264, 338, 378, 770, 1015, 1061 |
| BspCNI | CTCAG | 2 cut(s) | 259, 625 |
| BspFNI | CGCG | 2 cut(s) | 33, 324 |
| BspLI | GGNNCC | 6 cut(s) | 96, 161, 303, 447, 691, 972 |
| BspPI | GGATC | 7 cut(s) | 520, 563, 684, 697, 907, 959, 1189 |
| BspTI | CTTAAG | 1 cut(s) | 596 |
| BsrI | ACTGG | 3 cut(s) | 82, 703, 909 |
| BssECI | CCNNGG | 4 cut(s) | 31, 409, 718, 771 |
| BssMI | GATC | 9 cut(s) | 167, 185, 475, 525, 568, 689, 899, 964, 1181 |
| BssSI | CACGAG | 1 cut(s) | 825 |
| BssT1I | CCWWGG | 2 cut(s) | 718, 771 |
| Bst2BI | CACGAG | 1 cut(s) | 825 |
| Bst2UI | CCWGG | 4 cut(s) | 157, 411, 450, 648 |
| Bst4CI | ACNGT | 3 cut(s) | 658, 730, 742 |
| Bst6I | CTCTTC | 1 cut(s) | 1007 |
| BstAFI | CTTAAG | 1 cut(s) | 596 |
| BstC8I | GCNNGC | 1 cut(s) | 464 |
| BstDEI | CTNAG | 2 cut(s) | 267, 612 |
| BstDSI | CCRYGG | 1 cut(s) | 31 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 383 |
| BstF5I | GGATG | 5 cut(s) | 21, 240, 784, 788, 842 |
| BstFNI | CGCG | 2 cut(s) | 33, 324 |
| BstHHI | GCGC | 2 cut(s) | 517, 961 |
| BstKTI | GATC | 9 cut(s) | 170, 188, 478, 528, 571, 692, 902, 967, 1184 |
| BstMBI | GATC | 9 cut(s) | 167, 185, 475, 525, 568, 689, 899, 964, 1181 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 200, 321, 542, 722, 767, 989, 1085, 1145 |
| BstNI | CCWGG | 4 cut(s) | 157, 411, 450, 648 |
| BstSCI | CCNGG | 4 cut(s) | 155, 409, 448, 646 |
| BstSFI | CTRYAG | 1 cut(s) | 876 |
| BstUI | CGCG | 2 cut(s) | 33, 324 |
| BstX2I | RGATCY | 4 cut(s) | 475, 525, 689, 1181 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 257 |
| BstYI | RGATCY | 4 cut(s) | 475, 525, 689, 1181 |
| Bsu36I | CCTNAGG | 1 cut(s) | 267 |
| BsuI | GTATCC | 1 cut(s) | 880 |
| BsuRI | GGCC | 6 cut(s) | 264, 338, 378, 770, 1015, 1061 |
| BtgI | CCRYGG | 1 cut(s) | 31 |
| BtrI | CACGTC | 1 cut(s) | 793 |
| BtsCI | GGATG | 5 cut(s) | 21, 240, 784, 788, 842 |
| BtsIMutI | CAGTG | 3 cut(s) | 195, 710, 902 |
| Cac8I | GCNNGC | 1 cut(s) | 464 |
| CaiI | CAGNNNCTG | 2 cut(s) | 88, 677 |
| CfoI | GCGC | 2 cut(s) | 517, 961 |
| Cfr13I | GGNCC | 4 cut(s) | 159, 263, 376, 446 |
| Cfr42I | CCGCGG | 1 cut(s) | 34 |
| CseI | GACGC | 1 cut(s) | 313 |
| CsiI | ACCWGGT | 1 cut(s) | 448 |
| Csp6I | GTAC | 2 cut(s) | 364, 603 |
| CviAII | CATG | 4 cut(s) | 251, 257, 592, 668 |
| CviQI | GTAC | 2 cut(s) | 364, 603 |
| DdeI | CTNAG | 2 cut(s) | 267, 612 |
| DpnI | GATC | 9 cut(s) | 169, 187, 477, 527, 570, 691, 901, 966, 1183 |
| DpnII | GATC | 9 cut(s) | 167, 185, 475, 525, 568, 689, 899, 964, 1181 |
| DriI | GACNNNNNGTC | 1 cut(s) | 656 |
| Eam1104I | CTCTTC | 1 cut(s) | 1007 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 656 |
| EarI | CTCTTC | 1 cut(s) | 1007 |
| Eco130I | CCWWGG | 2 cut(s) | 718, 771 |
| Eco24I | GRGCYC | 1 cut(s) | 509 |
| Eco47I | GGWCC | 2 cut(s) | 159, 446 |
| Eco57I | CTGAAG | 2 cut(s) | 219, 1155 |
| Eco81I | CCTNAGG | 1 cut(s) | 267 |
| Eco88I | CYCGRG | 1 cut(s) | 1041 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 383 |
| EcoO109I | RGGNCCY | 2 cut(s) | 159, 376 |
| EcoRII | CCWGG | 4 cut(s) | 155, 409, 448, 646 |
| EcoT14I | CCWWGG | 2 cut(s) | 718, 771 |
| EcoT38I | GRGCYC | 1 cut(s) | 509 |
| ErhI | CCWWGG | 2 cut(s) | 718, 771 |
| FaeI | CATG | 4 cut(s) | 254, 260, 595, 671 |
| FaqI | GGGAC | 2 cut(s) | 459, 751 |
| FatI | CATG | 4 cut(s) | 250, 256, 591, 667 |
| FauI | CCCGC | 1 cut(s) | 1095 |
| FauNDI | CATATG | 1 cut(s) | 511 |
| FblI | GTMKAC | 1 cut(s) | 867 |
| FokI | GGATG | 5 cut(s) | 8, 227, 791, 795, 829 |
| FriOI | GRGCYC | 1 cut(s) | 509 |
| FspBI | CTAG | 2 cut(s) | 1017, 1201 |
| FspI | TGCGCA | 1 cut(s) | 516 |
| GlaI | GCGC | 2 cut(s) | 516, 960 |
| HaeIII | GGCC | 6 cut(s) | 264, 338, 378, 770, 1015, 1061 |
| HapII | CCGG | 2 cut(s) | 126, 968 |
| HgaI | GACGC | 1 cut(s) | 313 |
| HhaI | GCGC | 2 cut(s) | 517, 961 |
| Hin1II | CATG | 4 cut(s) | 254, 260, 595, 671 |
| Hin6I | GCGC | 2 cut(s) | 515, 959 |
| HinP1I | GCGC | 2 cut(s) | 515, 959 |
| HinfI | GANTC | 6 cut(s) | 246, 319, 429, 872, 1009, 1114 |
| HpaII | CCGG | 2 cut(s) | 126, 968 |
| HphI | GGTGA | 2 cut(s) | 204, 946 |
| Hpy166II | GTNNAC | 5 cut(s) | 8, 68, 149, 364, 868 |
| Hpy188I | TCNGA | 2 cut(s) | 245, 1135 |
| Hpy188III | TCNNGA | 7 cut(s) | 25, 328, 343, 433, 1006, 1043, 1179 |
| Hpy8I | GTNNAC | 5 cut(s) | 8, 68, 149, 364, 868 |
| HpyAV | CCTTC | 4 cut(s) | 162, 539, 570, 877 |
| HpyCH4III | ACNGT | 3 cut(s) | 658, 730, 742 |
| HpyCH4IV | ACGT | 2 cut(s) | 792, 890 |
| HpyCH4V | TGCA | 6 cut(s) | 536, 581, 671, 989, 1037, 1088 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 200, 321, 542, 722, 767, 989, 1085, 1145 |
| HpyF3I | CTNAG | 2 cut(s) | 267, 612 |
| HpySE526I | ACGT | 2 cut(s) | 792, 890 |
| Hsp92II | CATG | 4 cut(s) | 254, 260, 595, 671 |
| HspAI | GCGC | 2 cut(s) | 515, 959 |
| KspI | CCGCGG | 1 cut(s) | 34 |
| Kzo9I | GATC | 9 cut(s) | 167, 185, 475, 525, 568, 689, 899, 964, 1181 |
| LmnI | GCTCC | 2 cut(s) | 100, 301 |
| LweI | GCATC | 4 cut(s) | 30, 218, 773, 1097 |
| MabI | ACCWGGT | 1 cut(s) | 448 |
| MaeI | CTAG | 2 cut(s) | 1017, 1201 |
| MaeII | ACGT | 2 cut(s) | 792, 890 |
| MaeIII | GTNAC | 1 cut(s) | 433 |
| MalI | GATC | 9 cut(s) | 169, 187, 477, 527, 570, 691, 901, 966, 1183 |
| MboI | GATC | 9 cut(s) | 167, 185, 475, 525, 568, 689, 899, 964, 1181 |
| MboII | GAAGA | 2 cut(s) | 296, 994 |
| MfeI | CAATTG | 1 cut(s) | 142 |
| MflI | RGATCY | 4 cut(s) | 475, 525, 689, 1181 |
| MhlI | GDGCHC | 1 cut(s) | 509 |
| MluCI | AATT | 7 cut(s) | 15, 101, 133, 142, 349, 937, 1049 |
| MlyI | GAGTC | 2 cut(s) | 438, 1003 |
| MmeI | TCCRAC | 3 cut(s) | 451, 667, 870 |
| MseI | TTAA | 6 cut(s) | 38, 44, 56, 348, 597, 914 |
| MslI | CAYNNNNRTG | 2 cut(s) | 255, 359 |
| MspA1I | CMGCKG | 4 cut(s) | 33, 440, 630, 677 |
| MspCI | CTTAAG | 1 cut(s) | 596 |
| MspI | CCGG | 2 cut(s) | 126, 968 |
| MspR9I | CCNGG | 4 cut(s) | 157, 411, 450, 648 |
| MunI | CAATTG | 1 cut(s) | 142 |
| MvaI | CCWGG | 4 cut(s) | 157, 411, 450, 648 |
| MvnI | CGCG | 2 cut(s) | 33, 324 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 200, 321, 542, 722, 767, 989, 1085, 1145 |
| NdeI | CATATG | 1 cut(s) | 511 |
| NdeII | GATC | 9 cut(s) | 167, 185, 475, 525, 568, 689, 899, 964, 1181 |
| NlaIII | CATG | 4 cut(s) | 254, 260, 595, 671 |
| NlaIV | GGNNCC | 6 cut(s) | 96, 161, 303, 447, 691, 972 |
| NmeAIII | GCCGAG | 1 cut(s) | 991 |
| NmuCI | GTSAC | 1 cut(s) | 433 |
| NsbI | TGCGCA | 1 cut(s) | 516 |
| PaeR7I | CTCGAG | 1 cut(s) | 1041 |
| PfeI | GAWTC | 4 cut(s) | 246, 319, 872, 1114 |
| PflFI | GACNNNGTC | 2 cut(s) | 450, 818 |
| PfoI | TCCNGGA | 1 cut(s) | 155 |
| PleI | GAGTC | 2 cut(s) | 437, 1003 |
| PpsI | GAGTC | 2 cut(s) | 437, 1003 |
| PpuMI | RGGWCCY | 1 cut(s) | 159 |
| PshBI | ATTAAT | 1 cut(s) | 348 |
| PsiI | TTATAA | 1 cut(s) | 384 |
| Psp5II | RGGWCCY | 1 cut(s) | 159 |
| Psp6I | CCWGG | 4 cut(s) | 155, 409, 448, 646 |
| PspGI | CCWGG | 4 cut(s) | 155, 409, 448, 646 |
| PspN4I | GGNNCC | 6 cut(s) | 96, 161, 303, 447, 691, 972 |
| PspPI | GGNCC | 4 cut(s) | 159, 263, 376, 446 |
| PspPPI | RGGWCCY | 1 cut(s) | 159 |
| PstNI | CAGNNNCTG | 2 cut(s) | 88, 677 |
| PsuI | RGATCY | 4 cut(s) | 475, 525, 689, 1181 |
| PsyI | GACNNNGTC | 2 cut(s) | 450, 818 |
| PvuII | CAGCTG | 2 cut(s) | 440, 677 |
| RsaI | GTAC | 2 cut(s) | 365, 604 |
| RsaNI | GTAC | 2 cut(s) | 364, 603 |
| RseI | CAYNNNNRTG | 2 cut(s) | 255, 359 |
| SacII | CCGCGG | 1 cut(s) | 34 |
| SaqAI | TTAA | 6 cut(s) | 38, 44, 56, 348, 597, 914 |
| Sau3AI | GATC | 9 cut(s) | 167, 185, 475, 525, 568, 689, 899, 964, 1181 |
| Sau96I | GGNCC | 4 cut(s) | 159, 263, 376, 446 |
| SchI | GAGTC | 2 cut(s) | 438, 1003 |
| ScrFI | CCNGG | 4 cut(s) | 157, 411, 450, 648 |
| SduI | GDGCHC | 1 cut(s) | 509 |
| SexAI | ACCWGGT | 1 cut(s) | 448 |
| SfaNI | GCATC | 4 cut(s) | 30, 218, 773, 1097 |
| SfcI | CTRYAG | 1 cut(s) | 876 |
| Sfr274I | CTCGAG | 1 cut(s) | 1041 |
| Sfr303I | CCGCGG | 1 cut(s) | 34 |
| SgrBI | CCGCGG | 1 cut(s) | 34 |
| SinI | GGWCC | 2 cut(s) | 159, 446 |
| SlaI | CTCGAG | 1 cut(s) | 1041 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 255, 359 |
| SmlI | CTYRAG | 3 cut(s) | 596, 1041, 1160 |
| SmoI | CTYRAG | 3 cut(s) | 596, 1041, 1160 |
| Sse9I | AATT | 7 cut(s) | 15, 101, 133, 142, 349, 937, 1049 |
| SsiI | CCGC | 7 cut(s) | 31, 33, 71, 370, 628, 1062, 1102 |
| SspMI | CTAG | 2 cut(s) | 1017, 1201 |
| StyD4I | CCNGG | 4 cut(s) | 155, 409, 448, 646 |
| StyI | CCWWGG | 2 cut(s) | 718, 771 |
| TaaI | ACNGT | 3 cut(s) | 658, 730, 742 |
| TaiI | ACGT | 2 cut(s) | 795, 893 |
| TaqI | TCGA | 4 cut(s) | 417, 642, 1042, 1108 |
| TasI | AATT | 7 cut(s) | 15, 101, 133, 142, 349, 937, 1049 |
| TatI | WGTACW | 1 cut(s) | 363 |
| TauI | GCSGC | 2 cut(s) | 630, 1064 |
| TfiI | GAWTC | 4 cut(s) | 246, 319, 872, 1114 |
| Tru1I | TTAA | 6 cut(s) | 38, 44, 56, 348, 597, 914 |
| Tru9I | TTAA | 6 cut(s) | 38, 44, 56, 348, 597, 914 |
| TscAI | CASTG | 3 cut(s) | 202, 710, 909 |
| TseFI | GTSAC | 1 cut(s) | 433 |
| Tsp45I | GTSAC | 1 cut(s) | 433 |
| TspDTI | ATGAA | 5 cut(s) | 127, 267, 343, 656, 1016 |
| TspRI | CASTG | 3 cut(s) | 202, 710, 909 |
| Tth111I | GACNNNGTC | 2 cut(s) | 450, 818 |
| Vha464I | CTTAAG | 1 cut(s) | 596 |
| VpaK11BI | GGWCC | 2 cut(s) | 159, 446 |
| VspI | ATTAAT | 1 cut(s) | 348 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 383 |
| XapI | RAATTY | 2 cut(s) | 101, 937 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 257 |
| XhoI | CTCGAG | 1 cut(s) | 1041 |
| XmiI | GTMKAC | 1 cut(s) | 867 |
| XspI | CTAG | 2 cut(s) | 1017, 1201 |