pycom01g18920

quinone oxidoreductase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
17710723 .. 17713380
2658 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g18920.4

Sequence Viewer

Length: 978 bp
ATGGTGAAAGCCATTCGAGTTCATGAACTTGGTGGTCCTCAGGTCTTGAAATGGGAAGATGTGGAAATAGGAGAGCCGAAGGAGGGGGAGGTTCGTGTGAAGAACAAGGCGATAGGGGTTAATTTCATCGATGTCTACTTCCGCAAAGGACTTTATTATAAAGCTGATACAATGCCCTTCTCCCCAGGTATGGAAGCTTGTGGAGTTGTGACAGCCGTAGGACCTGGAGTAACAGGCAGGCGAGTTGGAGATCTGGTGGCCTATGTTGGCACTCCGATGGGGTCATATGCGGAAGAGCAGATTCTTCCTGAAAACAAAGTGGTGCCCGTTCCTCCTTCAATCGATCCTATTGTTGCAGCATCCATATTGCTTGGGGGTATGACAGCTCAGGTTCTACTACGCCAGTCTTTCAAGGTCGAACCAGGACACACACTCCTTGTTCACGCAGCAGCTGGTGGAGTTGGATCCCTTTTATGCCAGTGGGCTAATGCGCTTGGTGCAATTGTCATTGGAACTGTATCAACTAAAGAGAAGACAGCTCAGGCCAAGGATGATGGATGTCGCCATGTCATAGTGTACACGGAAGAGGATTTTGTTGCTCGAGTGACAGAAATAACATCTGACAATGGCGTTGATGTTGTCTATGATTCTGTAGGGAAGGATACCTTTCAGGGATCATTGGCATGCTTGAAGACTCGTGGATACATGGTGAGTTTCGGACAAGCATCAGGTGCAATTGATCCGGTCCCACTATCAGCTCTTGCAGCAAAGTCACTCTTCCTGACCAGGCCGGCCCTGTTCCAGTACACTGCAGCTCGAGACAAATTGTTAGAGGTTGCGGGAGAGGTCTTTGCTAATGTTGCATCAGGCGTATTGCGCGTTCGAGTAAATCACAAATACGCATTGTCTCACGCAGCACAAGCTCATGCAGACCTCGAGAACAGGAAAACATCCGGCTCGGCTGTGCTTATACCCTAA

Protein Analysis

326

Amino Acids

34.49

Weight (kDa)

6.66

Isoelectric Point (pI)

31.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 159
AccB1I GGYRCC 1 cut(s) 322
AccI GTMKAC 1 cut(s) 135
AccII CGCG 1 cut(s) 879
AciI CCGC 3 cut(s) 142, 290, 839
AclWI GGATC 5 cut(s) 338, 459, 472, 682, 734
AfaI GTAC 2 cut(s) 578, 806
AfiI CCNNNNNNNGG 2 cut(s) 83, 190
AgsI TTSAA 4 cut(s) 49, 339, 412, 691
AjnI CCWGG 4 cut(s) 184, 223, 421, 785
AluBI AGCT 8 cut(s) 164, 197, 386, 452, 539, 758, 815, 923
AluI AGCT 8 cut(s) 164, 197, 386, 452, 539, 758, 815, 923
Alw26I GTCTC 2 cut(s) 813, 912
AlwI GGATC 5 cut(s) 338, 459, 472, 682, 734
AlwNI CAGNNNCTG 1 cut(s) 452
Ama87I CYCGRG 3 cut(s) 600, 816, 935
AoxI GGCC 4 cut(s) 258, 543, 788, 792
ApeKI GCWGC 6 cut(s) 356, 446, 449, 764, 812, 914
AspLEI GCGC 2 cut(s) 493, 879
AspS9I GGNCC 4 cut(s) 35, 221, 745, 793
AsuHPI GGTGA 2 cut(s) 16, 721
AvaI CYCGRG 3 cut(s) 600, 816, 935
AvaII GGWCC 3 cut(s) 35, 221, 745
AxyI CCTNAGG 1 cut(s) 39
BaeGI GKGCMC 1 cut(s) 327
BamHI GGATCC 1 cut(s) 464
BanI GGYRCC 1 cut(s) 322
BauI CACGAG 1 cut(s) 696
BbsI GAAGAC 2 cut(s) 539, 698
BbvI GCAGC 6 cut(s) 368, 458, 461, 776, 824, 926
BccI CCATC 2 cut(s) 271, 548
BceAI ACGGC 1 cut(s) 200
BciT130I CCWGG 4 cut(s) 186, 225, 423, 787
BciVI GTATCC 2 cut(s) 655, 695
BcoDI GTCTC 2 cut(s) 813, 912
BfmI CTRYAG 2 cut(s) 651, 810
BfuI GTATCC 2 cut(s) 655, 695
BglII AGATCT 1 cut(s) 250
BisI GCNGC 6 cut(s) 357, 447, 450, 765, 813, 915
BlsI GCNGC 6 cut(s) 358, 448, 451, 766, 814, 916
Bme1390I CCNGG 4 cut(s) 186, 225, 423, 787
Bme18I GGWCC 3 cut(s) 35, 221, 745
BmeT110I CYCGRG 3 cut(s) 600, 816, 935
BmgT120I GGNCC 4 cut(s) 35, 221, 745, 793
BmiI GGNNCC 3 cut(s) 324, 466, 747
BmrFI CCNGG 4 cut(s) 186, 225, 423, 787
BmsI GCATC 3 cut(s) 368, 734, 872
BpiI GAAGAC 2 cut(s) 539, 698
BpmI CTGGAG 1 cut(s) 246
Bpu10I CCTNAGC 2 cut(s) 387, 540
Bsa29I ATCGAT 2 cut(s) 129, 342
BsaJI CCNNGG 2 cut(s) 184, 546
BsaWI WCCGGW 1 cut(s) 742
BsaXI ACNNNNNCTCC 4 cut(s) 240, 270, 417, 447
Bsc4I CCNNNNNNNGG 2 cut(s) 83, 190
Bse118I RCCGGY 1 cut(s) 790
Bse1I ACTGG 3 cut(s) 403, 478, 802
Bse21I CCTNAGG 1 cut(s) 39
BseBI CCWGG 4 cut(s) 186, 225, 423, 787
BseCI ATCGAT 2 cut(s) 129, 342
BseDI CCNNGG 2 cut(s) 184, 546
BseGI GGATG 4 cut(s) 359, 556, 563, 950
BseLI CCNNNNNNNGG 2 cut(s) 83, 190
BseMII CTCAG 3 cut(s) 53, 401, 554
BseNI ACTGG 3 cut(s) 403, 478, 802
BseSI GKGCMC 1 cut(s) 327
BseXI GCAGC 6 cut(s) 368, 458, 461, 776, 824, 926
Bsh1236I CGCG 1 cut(s) 879
BshFI GGCC 4 cut(s) 260, 545, 790, 794
BshNI GGYRCC 1 cut(s) 322
BshVI ATCGAT 2 cut(s) 129, 342
BsiHKCI CYCGRG 3 cut(s) 600, 816, 935
BsiSI CCGG 3 cut(s) 743, 791, 954
BslFI GGGAC 1 cut(s) 731
BslI CCNNNNNNNGG 2 cut(s) 83, 190
BsmAI GTCTC 2 cut(s) 813, 912
BsmFI GGGAC 1 cut(s) 731
BsnI GGCC 4 cut(s) 260, 545, 790, 794
BsoBI CYCGRG 3 cut(s) 600, 816, 935
Bsp1286I GDGCHC 1 cut(s) 327
Bsp1407I TGTACA 1 cut(s) 576
Bsp143I GATC 5 cut(s) 250, 343, 464, 674, 739
BspACI CCGC 3 cut(s) 142, 290, 839
BspANI GGCC 4 cut(s) 260, 545, 790, 794
BspCNI CTCAG 3 cut(s) 52, 400, 553
BspDI ATCGAT 2 cut(s) 129, 342
BspFNI CGCG 1 cut(s) 879
BspHI TCATGA 1 cut(s) 22
BspLI GGNNCC 3 cut(s) 324, 466, 747
BspMAI CTGCAG 1 cut(s) 814
BspPI GGATC 5 cut(s) 338, 459, 472, 682, 734
BspQI GCTCTTC 1 cut(s) 288
BspT107I GGYRCC 1 cut(s) 322
BsrFI RCCGGY 1 cut(s) 790
BsrGI TGTACA 1 cut(s) 576
BsrI ACTGG 3 cut(s) 403, 478, 802
BssAI RCCGGY 1 cut(s) 790
BssECI CCNNGG 2 cut(s) 184, 546
BssMI GATC 5 cut(s) 250, 343, 464, 674, 739
BssSI CACGAG 1 cut(s) 696
BssT1I CCWWGG 1 cut(s) 546
Bst2BI CACGAG 1 cut(s) 696
Bst2UI CCWGG 4 cut(s) 186, 225, 423, 787
Bst4CI ACNGT 1 cut(s) 517
Bst6I CTCTTC 3 cut(s) 288, 579, 782
BstAPI GCANNNNNTGC 1 cut(s) 731
BstAUI TGTACA 1 cut(s) 576
BstC8I GCNNGC 3 cut(s) 239, 685, 792
BstDEI CTNAG 3 cut(s) 39, 387, 540
BstF5I GGATG 4 cut(s) 359, 556, 563, 950
BstFNI CGCG 1 cut(s) 879
BstHHI GCGC 2 cut(s) 493, 879
BstKTI GATC 5 cut(s) 253, 346, 467, 677, 742
BstMAI GTCTC 2 cut(s) 813, 912
BstMBI GATC 5 cut(s) 250, 343, 464, 674, 739
BstMWI GCNNNNNNNGC 6 cut(s) 497, 731, 764, 860, 876, 920
BstNI CCWGG 4 cut(s) 186, 225, 423, 787
BstNSI RCATGY 1 cut(s) 687
BstSCI CCNGG 4 cut(s) 184, 223, 421, 785
BstSFI CTRYAG 2 cut(s) 651, 810
BstSLI GKGCMC 1 cut(s) 327
BstUI CGCG 1 cut(s) 879
BstV1I GCAGC 6 cut(s) 368, 458, 461, 776, 824, 926
BstV2I GAAGAC 2 cut(s) 539, 698
BstX2I RGATCY 2 cut(s) 250, 464
BstYI RGATCY 2 cut(s) 250, 464
Bsu15I ATCGAT 2 cut(s) 129, 342
Bsu36I CCTNAGG 1 cut(s) 39
BsuI GTATCC 2 cut(s) 655, 695
BsuRI GGCC 4 cut(s) 260, 545, 790, 794
BsuTUI ATCGAT 2 cut(s) 129, 342
BtsCI GGATG 4 cut(s) 359, 556, 563, 950
BtsI GCAGTG 1 cut(s) 807
BtsIMutI CAGTG 2 cut(s) 485, 807
Cac8I GCNNGC 3 cut(s) 239, 685, 792
CaiI CAGNNNCTG 1 cut(s) 452
CciI TCATGA 1 cut(s) 22
CfoI GCGC 2 cut(s) 493, 879
Cfr10I RCCGGY 1 cut(s) 790
Cfr13I GGNCC 4 cut(s) 35, 221, 745, 793
ClaI ATCGAT 2 cut(s) 129, 342
Csp6I GTAC 2 cut(s) 577, 805
CviAII CATG 5 cut(s) 23, 566, 684, 706, 926
CviQI GTAC 2 cut(s) 577, 805
DdeI CTNAG 3 cut(s) 39, 387, 540
DpnI GATC 5 cut(s) 252, 345, 466, 676, 741
DpnII GATC 5 cut(s) 250, 343, 464, 674, 739
Eam1104I CTCTTC 3 cut(s) 288, 579, 782
EarI CTCTTC 3 cut(s) 288, 579, 782
Eco130I CCWWGG 1 cut(s) 546
Eco47I GGWCC 3 cut(s) 35, 221, 745
Eco81I CCTNAGG 1 cut(s) 39
Eco88I CYCGRG 3 cut(s) 600, 816, 935
EcoO109I RGGNCCY 1 cut(s) 221
EcoRII CCWGG 4 cut(s) 184, 223, 421, 785
EcoT14I CCWWGG 1 cut(s) 546
ErhI CCWWGG 1 cut(s) 546
FaeI CATG 5 cut(s) 26, 569, 687, 709, 929
FalI AAGNNNNNCTT 4 cut(s) 650, 682, 761, 793
FaqI GGGAC 1 cut(s) 731
FatI CATG 5 cut(s) 22, 565, 683, 705, 925
FauI CCCGC 1 cut(s) 832
FauNDI CATATG 1 cut(s) 286
FblI GTMKAC 1 cut(s) 135
Fnu4HI GCNGC 6 cut(s) 357, 447, 450, 765, 813, 915
FokI GGATG 4 cut(s) 346, 563, 570, 937
FseI GGCCGGCC 1 cut(s) 794
Fsp4HI GCNGC 6 cut(s) 357, 447, 450, 765, 813, 915
GlaI GCGC 2 cut(s) 492, 878
GluI GCNGC 6 cut(s) 357, 447, 450, 765, 813, 915
GsuI CTGGAG 1 cut(s) 246
HaeIII GGCC 4 cut(s) 260, 545, 790, 794
HapII CCGG 3 cut(s) 743, 791, 954
HhaI GCGC 2 cut(s) 493, 879
Hin1II CATG 5 cut(s) 26, 569, 687, 709, 929
Hin6I GCGC 2 cut(s) 491, 877
HinP1I GCGC 2 cut(s) 491, 877
HindIII AAGCTT 1 cut(s) 195
HinfI GANTC 3 cut(s) 301, 647, 694
HpaII CCGG 3 cut(s) 743, 791, 954
HphI GGTGA 2 cut(s) 16, 721
Hpy166II GTNNAC 5 cut(s) 136, 442, 577, 579, 807
Hpy188I TCNGA 3 cut(s) 276, 622, 719
Hpy188III TCNNGA 6 cut(s) 23, 46, 308, 781, 818, 937
Hpy8I GTNNAC 5 cut(s) 136, 442, 577, 579, 807
HpyAV CCTTC 4 cut(s) 73, 187, 345, 652
HpyCH4III ACNGT 1 cut(s) 517
HpyCH4V TGCA 7 cut(s) 356, 500, 734, 764, 812, 863, 929
HpyF10VI GCNNNNNNNGC 6 cut(s) 497, 731, 764, 860, 876, 920
HpyF3I CTNAG 3 cut(s) 39, 387, 540
Hsp92II CATG 5 cut(s) 26, 569, 687, 709, 929
HspAI GCGC 2 cut(s) 491, 877
KroI GCCGGC 1 cut(s) 790
KroNI GCCGGC 1 cut(s) 792
Kzo9I GATC 5 cut(s) 250, 343, 464, 674, 739
LguI GCTCTTC 1 cut(s) 288
Lsp1109I GCAGC 6 cut(s) 368, 458, 461, 776, 824, 926
LweI GCATC 3 cut(s) 368, 734, 872
MaeIII GTNAC 4 cut(s) 208, 229, 604, 771
MalI GATC 5 cut(s) 252, 345, 466, 676, 741
MboI GATC 5 cut(s) 250, 343, 464, 674, 739
MboII GAAGA 8 cut(s) 68, 112, 296, 305, 544, 596, 703, 769
MfeI CAATTG 2 cut(s) 501, 735
MflI RGATCY 2 cut(s) 250, 464
MhlI GDGCHC 1 cut(s) 327
MluCI AATT 4 cut(s) 121, 501, 735, 824
MlyI GAGTC 1 cut(s) 688
MmeI TCCRAC 2 cut(s) 226, 442
MnlI CCTC 8 cut(s) 48, 76, 82, 342, 580, 826, 838, 944
MroNI GCCGGC 1 cut(s) 790
MseI TTAA 1 cut(s) 120
MslI CAYNNNNRTG 2 cut(s) 275, 682
MspA1I CMGCKG 1 cut(s) 452
MspI CCGG 3 cut(s) 743, 791, 954
MspR9I CCNGG 4 cut(s) 186, 225, 423, 787
MunI CAATTG 2 cut(s) 501, 735
MvaI CCWGG 4 cut(s) 186, 225, 423, 787
MvnI CGCG 1 cut(s) 879
MwoI GCNNNNNNNGC 6 cut(s) 497, 731, 764, 860, 876, 920
NaeI GCCGGC 1 cut(s) 792
NdeI CATATG 1 cut(s) 286
NdeII GATC 5 cut(s) 250, 343, 464, 674, 739
NgoMIV GCCGGC 1 cut(s) 790
NlaIII CATG 5 cut(s) 26, 569, 687, 709, 929
NlaIV GGNNCC 3 cut(s) 324, 466, 747
NmeAIII GCCGAG 1 cut(s) 938
NmuCI GTSAC 3 cut(s) 208, 604, 771
NspI RCATGY 1 cut(s) 687
PaeI GCATGC 1 cut(s) 687
PaeR7I CTCGAG 3 cut(s) 600, 816, 935
PagI TCATGA 1 cut(s) 22
PciSI GCTCTTC 1 cut(s) 288
PdiI GCCGGC 1 cut(s) 792
PfeI GAWTC 2 cut(s) 301, 647
PkrI GCNGC 6 cut(s) 358, 448, 451, 766, 814, 916
PleI GAGTC 1 cut(s) 688
PpsI GAGTC 1 cut(s) 688
PpuMI RGGWCCY 1 cut(s) 221
PsiI TTATAA 1 cut(s) 159
Psp5II RGGWCCY 1 cut(s) 221
Psp6I CCWGG 4 cut(s) 184, 223, 421, 785
PspGI CCWGG 4 cut(s) 184, 223, 421, 785
PspN4I GGNNCC 3 cut(s) 324, 466, 747
PspPI GGNCC 4 cut(s) 35, 221, 745, 793
PspPPI RGGWCCY 1 cut(s) 221
PspXI VCTCGAGB 1 cut(s) 600
PsrI GAACNNNNNNTAC 2 cut(s) 864, 896
PstI CTGCAG 1 cut(s) 814
PstNI CAGNNNCTG 1 cut(s) 452
PsuI RGATCY 2 cut(s) 250, 464
PvuII CAGCTG 1 cut(s) 452
RigI GGCCGGCC 1 cut(s) 794
RsaI GTAC 2 cut(s) 578, 806
RsaNI GTAC 2 cut(s) 577, 805
RseI CAYNNNNRTG 2 cut(s) 275, 682
SapI GCTCTTC 1 cut(s) 288
SaqAI TTAA 1 cut(s) 120
SatI GCNGC 6 cut(s) 357, 447, 450, 765, 813, 915
Sau3AI GATC 5 cut(s) 250, 343, 464, 674, 739
Sau96I GGNCC 4 cut(s) 35, 221, 745, 793
SchI GAGTC 1 cut(s) 688
ScrFI CCNGG 4 cut(s) 186, 225, 423, 787
SduI GDGCHC 1 cut(s) 327
SfaNI GCATC 3 cut(s) 368, 734, 872
SfcI CTRYAG 2 cut(s) 651, 810
Sfr274I CTCGAG 3 cut(s) 600, 816, 935
SinI GGWCC 3 cut(s) 35, 221, 745
SlaI CTCGAG 3 cut(s) 600, 816, 935
SmiMI CAYNNNNRTG 2 cut(s) 275, 682
SmlI CTYRAG 3 cut(s) 600, 816, 935
SmoI CTYRAG 3 cut(s) 600, 816, 935
SphI GCATGC 1 cut(s) 687
Sse9I AATT 4 cut(s) 121, 501, 735, 824
SsiI CCGC 3 cut(s) 142, 290, 839
StyD4I CCNGG 4 cut(s) 184, 223, 421, 785
StyI CCWWGG 1 cut(s) 546
TaaI ACNGT 1 cut(s) 517
TaqI TCGA 8 cut(s) 16, 129, 342, 417, 601, 817, 883, 936
TasI AATT 4 cut(s) 121, 501, 735, 824
TatI WGTACW 2 cut(s) 576, 804
TfiI GAWTC 2 cut(s) 301, 647
Tru1I TTAA 1 cut(s) 120
Tru9I TTAA 1 cut(s) 120
TscAI CASTG 2 cut(s) 485, 814
TseFI GTSAC 3 cut(s) 208, 604, 771
TseI GCWGC 6 cut(s) 356, 446, 449, 764, 812, 914
Tsp45I GTSAC 3 cut(s) 208, 604, 771
TspDTI ATGAA 3 cut(s) 11, 39, 115
TspGWI ACGGA 1 cut(s) 596
TspRI CASTG 2 cut(s) 485, 814
VpaK11BI GGWCC 3 cut(s) 35, 221, 745
XceI RCATGY 1 cut(s) 687
XhoI CTCGAG 3 cut(s) 600, 816, 935
XmiI GTMKAC 1 cut(s) 135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.