Prupe.2G133300_v2.0.a1

quinone oxidoreductase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
19116432 .. 19121059
4628 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G133300.1

Sequence Viewer

Length: 975 bp
ATGGTCAAAGCCATTCGAGTCCATGAGCTTGGTGGACCTGAGGTCTTGAAATGGGAAGATGTGGAAATAGGAGAGCCAAAGGAGGGAGAGGTTCGTGTGAAGAACAAGGCCATTGGGCTTAATTTCATTGATGTATACTTCCGCAAAGGCGTTTATAAGGCTGCTACGTTTCCCTACACCCCAGGTGGTGAGGCTTGTGGAGTTGTGACAGCTGTGGGACCAGGACTAACAGGCAGGCAAGTTGGAGATCTTGTAGCCTATGCTGGTCAGCCAATGGGCTCATATGCGGAAGAGCAGATCCTTCCTGCAGACAGAGTTGTGCCTGTTCCTCCTTCCATTGATCCTACTGTTGCTGCATCCCTCTTGTCCAAGGGTATGACAGCTCAGTTCCTACTACGCAGTTGTTTCAAGGTTGAACCTGGACACGCAGTCCTTGTCCATGCAGCAGCTGGTGGAGTTGGATCCCTTTTATGCCAGTGGGCTAATGCCCTTGGTGCCACTGTCATTGGAACTGTATCTACTAAAGAGAAGGCAGCTCAAGCCGAGGAGGATGGATGTCACCATGTCATAATCAATAAGGAAGAGGACTTTGTTGCTCGAGTGAAAGAAATAACATCTGACAATGGCGTCGAGGTTGTTTATGATTCTGTAGGGAAGGATACTTTTGAGGGATCACTGGCATGCTTGAAGACTCGTGGATACATGGTGAGTTTTGGGCAGTCATCAGGTGCGCCAGATCCGGTTCCATTGTCAGACATTGCAGTGAAGTCACTGTTCTTGACTAGGCCTAGTCTCTTTAATTACGCTGCAACTCGAGACGAATTACTAGGGATGGCAGGTGAGGTATTTGGTAATGTTCAATCAGGTGTGTTGCGGGTTCGAGTAAATCACACCTACCCATTGTCTCAAGCAGCACAGGCACACGAAGACCTTGAGAATAGGAAAACATCTGGATCTGTTGTGCTTATCCCTTAA

Protein Analysis

325

Amino Acids

34.37

Weight (kDa)

5.58

Isoelectric Point (pI)

37.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 156
AarI CACCTGC 1 cut(s) 827
AasI GACNNNNNNGTC 1 cut(s) 626
Acc36I ACCTGC 1 cut(s) 827
AccB1I GGYRCC 1 cut(s) 494
AccI GTMKAC 1 cut(s) 135
AciI CCGC 3 cut(s) 142, 287, 874
AclWI GGATC 7 cut(s) 292, 335, 456, 469, 679, 731, 961
AcyI GRCGYC 1 cut(s) 627
AfiI CCNNNNNNNGG 1 cut(s) 83
AgsI TTSAA 5 cut(s) 49, 409, 416, 688, 860
AhdI GACNNNNNGTC 2 cut(s) 41, 428
AjnI CCWGG 3 cut(s) 181, 220, 418
AluBI AGCT 5 cut(s) 28, 212, 383, 449, 536
AluI AGCT 5 cut(s) 28, 212, 383, 449, 536
Alw26I GTCTC 3 cut(s) 797, 810, 909
AlwI GGATC 7 cut(s) 292, 335, 456, 469, 679, 731, 961
AlwNI CAGNNNCTG 1 cut(s) 449
Ama87I CYCGRG 2 cut(s) 597, 813
AoxI GGCC 2 cut(s) 108, 785
ApeKI GCWGC 7 cut(s) 161, 353, 443, 446, 533, 806, 911
AspLEI GCGC 1 cut(s) 733
AspS9I GGNCC 2 cut(s) 35, 218
AsuHPI GGTGA 4 cut(s) 200, 551, 718, 851
AvaI CYCGRG 2 cut(s) 597, 813
AvaII GGWCC 2 cut(s) 35, 218
AxyI CCTNAGG 1 cut(s) 39
BamHI GGATCC 1 cut(s) 461
BanI GGYRCC 1 cut(s) 494
BanII GRGCYC 1 cut(s) 281
BauI CACGAG 1 cut(s) 693
BbsI GAAGAC 2 cut(s) 695, 933
BbvI GCAGC 7 cut(s) 148, 340, 455, 458, 545, 793, 923
BccI CCATC 2 cut(s) 545, 826
BciT130I CCWGG 3 cut(s) 183, 222, 420
BciVI GTATCC 2 cut(s) 652, 692
BcoDI GTCTC 3 cut(s) 797, 810, 909
BfaI CTAG 3 cut(s) 783, 789, 827
BfmI CTRYAG 2 cut(s) 306, 648
BfuAI ACCTGC 1 cut(s) 827
BfuI GTATCC 2 cut(s) 652, 692
BglII AGATCT 1 cut(s) 247
BisI GCNGC 7 cut(s) 162, 354, 444, 447, 534, 807, 912
BlsI GCNGC 7 cut(s) 163, 355, 445, 448, 535, 808, 913
Bme1390I CCNGG 3 cut(s) 183, 222, 420
Bme18I GGWCC 2 cut(s) 35, 218
BmeRI GACNNNNNGTC 2 cut(s) 41, 428
BmeT110I CYCGRG 2 cut(s) 597, 813
BmgT120I GGNCC 2 cut(s) 35, 218
BmiI GGNNCC 4 cut(s) 219, 463, 496, 744
BmrFI CCNGG 3 cut(s) 183, 222, 420
BmsI GCATC 1 cut(s) 365
BpiI GAAGAC 2 cut(s) 695, 933
BpuEI CTTGAG 3 cut(s) 522, 891, 953
BsaHI GRCGYC 1 cut(s) 627
BsaJI CCNNGG 4 cut(s) 181, 369, 490, 543
BsaWI WCCGGW 1 cut(s) 739
BsaXI ACNNNNNCTCC 2 cut(s) 237, 267
Bsc4I CCNNNNNNNGG 1 cut(s) 83
Bse1I ACTGG 2 cut(s) 475, 681
Bse21I CCTNAGG 1 cut(s) 39
Bse3DI GCAATG 1 cut(s) 756
BseBI CCWGG 3 cut(s) 183, 222, 420
BseDI CCNNGG 4 cut(s) 181, 369, 490, 543
BseGI GGATG 4 cut(s) 356, 556, 560, 837
BseLI CCNNNNNNNGG 1 cut(s) 83
BseMI GCAATG 1 cut(s) 756
BseMII CTCAG 2 cut(s) 30, 398
BseNI ACTGG 2 cut(s) 475, 681
BseRI GAGGAG 1 cut(s) 560
BseXI GCAGC 7 cut(s) 148, 340, 455, 458, 545, 793, 923
BshFI GGCC 2 cut(s) 110, 787
BshNI GGYRCC 1 cut(s) 494
BsiHKCI CYCGRG 2 cut(s) 597, 813
BsiSI CCGG 1 cut(s) 740
BslFI GGGAC 1 cut(s) 231
BslI CCNNNNNNNGG 1 cut(s) 83
BsmAI GTCTC 3 cut(s) 797, 810, 909
BsmBI CGTCTC 1 cut(s) 810
BsmFI GGGAC 1 cut(s) 231
BsnI GGCC 2 cut(s) 110, 787
BsoBI CYCGRG 2 cut(s) 597, 813
Bsp1286I GDGCHC 1 cut(s) 281
Bsp143I GATC 7 cut(s) 247, 297, 340, 461, 671, 736, 953
BspACI CCGC 3 cut(s) 142, 287, 874
BspANI GGCC 2 cut(s) 110, 787
BspCNI CTCAG 2 cut(s) 31, 397
BspLI GGNNCC 4 cut(s) 219, 463, 496, 744
BspMAI CTGCAG 1 cut(s) 310
BspMI ACCTGC 1 cut(s) 827
BspPI GGATC 7 cut(s) 292, 335, 456, 469, 679, 731, 961
BspQI GCTCTTC 1 cut(s) 285
BspT107I GGYRCC 1 cut(s) 494
BsrDI GCAATG 1 cut(s) 756
BsrI ACTGG 2 cut(s) 475, 681
BssECI CCNNGG 4 cut(s) 181, 369, 490, 543
BssMI GATC 7 cut(s) 247, 297, 340, 461, 671, 736, 953
BssNAI GTATAC 1 cut(s) 136
BssNI GRCGYC 1 cut(s) 627
BssSI CACGAG 1 cut(s) 693
BssT1I CCWWGG 2 cut(s) 369, 490
Bst1107I GTATAC 1 cut(s) 136
Bst2BI CACGAG 1 cut(s) 693
Bst2UI CCWGG 3 cut(s) 183, 222, 420
Bst4CI ACNGT 4 cut(s) 349, 502, 514, 774
Bst6I CTCTTC 2 cut(s) 285, 576
BstACI GRCGYC 1 cut(s) 627
BstC8I GCNNGC 2 cut(s) 236, 682
BstDEI CTNAG 2 cut(s) 39, 384
BstF5I GGATG 4 cut(s) 356, 556, 560, 837
BstHHI GCGC 1 cut(s) 733
BstKTI GATC 7 cut(s) 250, 300, 343, 464, 674, 739, 956
BstMAI GTCTC 3 cut(s) 797, 810, 909
BstMBI GATC 7 cut(s) 247, 297, 340, 461, 671, 736, 953
BstMWI GCNNNNNNNGC 3 cut(s) 494, 539, 917
BstNI CCWGG 3 cut(s) 183, 222, 420
BstNSI RCATGY 1 cut(s) 684
BstSCI CCNGG 3 cut(s) 181, 220, 418
BstSFI CTRYAG 2 cut(s) 306, 648
BstV1I GCAGC 7 cut(s) 148, 340, 455, 458, 545, 793, 923
BstV2I GAAGAC 2 cut(s) 695, 933
BstX2I RGATCY 5 cut(s) 247, 297, 461, 736, 953
BstXI CCANNNNNNTGG 1 cut(s) 29
BstYI RGATCY 5 cut(s) 247, 297, 461, 736, 953
BstZ17I GTATAC 1 cut(s) 136
Bsu36I CCTNAGG 1 cut(s) 39
BsuI GTATCC 2 cut(s) 652, 692
BsuRI GGCC 2 cut(s) 110, 787
BtsCI GGATG 4 cut(s) 356, 556, 560, 837
BtsI GCAGTG 1 cut(s) 768
BtsIMutI CAGTG 5 cut(s) 482, 498, 674, 768, 770
BveI ACCTGC 1 cut(s) 827
Cac8I GCNNGC 2 cut(s) 236, 682
CaiI CAGNNNCTG 1 cut(s) 449
CfoI GCGC 1 cut(s) 733
Cfr13I GGNCC 2 cut(s) 35, 218
CseI GACGC 1 cut(s) 616
CspCI CAANNNNNGTGG 2 cut(s) 487, 522
CviAII CATG 5 cut(s) 23, 440, 563, 681, 703
DdeI CTNAG 2 cut(s) 39, 384
DpnI GATC 7 cut(s) 249, 299, 342, 463, 673, 738, 955
DpnII GATC 7 cut(s) 247, 297, 340, 461, 671, 736, 953
DrdI GACNNNNNNGTC 1 cut(s) 626
DriI GACNNNNNGTC 2 cut(s) 41, 428
DseDI GACNNNNNNGTC 1 cut(s) 626
Eam1104I CTCTTC 2 cut(s) 285, 576
Eam1105I GACNNNNNGTC 2 cut(s) 41, 428
EarI CTCTTC 2 cut(s) 285, 576
Eco130I CCWWGG 2 cut(s) 369, 490
Eco147I AGGCCT 1 cut(s) 787
Eco24I GRGCYC 1 cut(s) 281
Eco47I GGWCC 2 cut(s) 35, 218
Eco81I CCTNAGG 1 cut(s) 39
Eco88I CYCGRG 2 cut(s) 597, 813
EcoRII CCWGG 3 cut(s) 181, 220, 418
EcoT14I CCWWGG 2 cut(s) 369, 490
EcoT38I GRGCYC 1 cut(s) 281
ErhI CCWWGG 2 cut(s) 369, 490
Esp3I CGTCTC 1 cut(s) 810
FaeI CATG 5 cut(s) 26, 443, 566, 684, 706
FaqI GGGAC 1 cut(s) 231
FatI CATG 5 cut(s) 22, 439, 562, 680, 702
FauI CCCGC 1 cut(s) 867
FauNDI CATATG 1 cut(s) 283
FblI GTMKAC 1 cut(s) 135
Fnu4HI GCNGC 7 cut(s) 162, 354, 444, 447, 534, 807, 912
FokI GGATG 4 cut(s) 343, 563, 567, 844
FriOI GRGCYC 1 cut(s) 281
Fsp4HI GCNGC 7 cut(s) 162, 354, 444, 447, 534, 807, 912
FspBI CTAG 3 cut(s) 783, 789, 827
GlaI GCGC 1 cut(s) 732
GluI GCNGC 7 cut(s) 162, 354, 444, 447, 534, 807, 912
HaeIII GGCC 2 cut(s) 110, 787
HapII CCGG 1 cut(s) 740
HgaI GACGC 1 cut(s) 616
HhaI GCGC 1 cut(s) 733
Hin1I GRCGYC 1 cut(s) 627
Hin1II CATG 5 cut(s) 26, 443, 566, 684, 706
Hin6I GCGC 1 cut(s) 731
HinP1I GCGC 1 cut(s) 731
HinfI GANTC 3 cut(s) 18, 644, 691
HpaII CCGG 1 cut(s) 740
HphI GGTGA 4 cut(s) 200, 551, 718, 851
Hpy166II GTNNAC 2 cut(s) 35, 136
Hpy188I TCNGA 2 cut(s) 619, 754
Hpy188III TCNNGA 4 cut(s) 46, 778, 815, 951
Hpy8I GTNNAC 2 cut(s) 35, 136
Hpy99I CGWCG 1 cut(s) 632
HpyAV CCTTC 4 cut(s) 311, 342, 523, 649
HpyCH4III ACNGT 4 cut(s) 349, 502, 514, 774
HpyCH4IV ACGT 1 cut(s) 167
HpyCH4V TGCA 5 cut(s) 308, 356, 443, 761, 809
HpyF10VI GCNNNNNNNGC 3 cut(s) 494, 539, 917
HpyF3I CTNAG 2 cut(s) 39, 384
HpySE526I ACGT 1 cut(s) 167
Hsp92I GRCGYC 1 cut(s) 627
Hsp92II CATG 5 cut(s) 26, 443, 566, 684, 706
HspAI GCGC 1 cut(s) 731
Kzo9I GATC 7 cut(s) 247, 297, 340, 461, 671, 736, 953
LguI GCTCTTC 1 cut(s) 285
Lsp1109I GCAGC 7 cut(s) 148, 340, 455, 458, 545, 793, 923
LweI GCATC 1 cut(s) 365
MaeI CTAG 3 cut(s) 783, 789, 827
MaeII ACGT 1 cut(s) 167
MaeIII GTNAC 3 cut(s) 205, 557, 768
MalI GATC 7 cut(s) 249, 299, 342, 463, 673, 738, 955
MboI GATC 7 cut(s) 247, 297, 340, 461, 671, 736, 953
MboII GAAGA 6 cut(s) 68, 112, 302, 593, 700, 938
MflI RGATCY 5 cut(s) 247, 297, 461, 736, 953
MhlI GDGCHC 1 cut(s) 281
MluCI AATT 3 cut(s) 121, 799, 821
MlyI GAGTC 2 cut(s) 27, 685
MmeI TCCRAC 2 cut(s) 223, 439
MseI TTAA 3 cut(s) 120, 798, 973
MslI CAYNNNNRTG 2 cut(s) 679, 761
MspA1I CMGCKG 2 cut(s) 212, 449
MspI CCGG 1 cut(s) 740
MspR9I CCNGG 3 cut(s) 183, 222, 420
MvaI CCWGG 3 cut(s) 183, 222, 420
MwoI GCNNNNNNNGC 3 cut(s) 494, 539, 917
NdeI CATATG 1 cut(s) 283
NdeII GATC 7 cut(s) 247, 297, 340, 461, 671, 736, 953
NlaIII CATG 5 cut(s) 26, 443, 566, 684, 706
NlaIV GGNNCC 4 cut(s) 219, 463, 496, 744
NmeAIII GCCGAG 1 cut(s) 568
NmuCI GTSAC 3 cut(s) 205, 557, 768
NspI RCATGY 1 cut(s) 684
PaeI GCATGC 1 cut(s) 684
PaeR7I CTCGAG 2 cut(s) 597, 813
PaqCI CACCTGC 1 cut(s) 827
PceI AGGCCT 1 cut(s) 787
PciSI GCTCTTC 1 cut(s) 285
PfeI GAWTC 1 cut(s) 644
PkrI GCNGC 7 cut(s) 163, 355, 445, 448, 535, 808, 913
PleI GAGTC 2 cut(s) 26, 685
PpsI GAGTC 2 cut(s) 26, 685
PsiI TTATAA 1 cut(s) 156
Psp6I CCWGG 3 cut(s) 181, 220, 418
PspGI CCWGG 3 cut(s) 181, 220, 418
PspN4I GGNNCC 4 cut(s) 219, 463, 496, 744
PspPI GGNCC 2 cut(s) 35, 218
PspXI VCTCGAGB 1 cut(s) 597
PsrI GAACNNNNNNTAC 2 cut(s) 502, 534
PstI CTGCAG 1 cut(s) 310
PstNI CAGNNNCTG 1 cut(s) 449
PsuI RGATCY 5 cut(s) 247, 297, 461, 736, 953
PvuII CAGCTG 2 cut(s) 212, 449
RseI CAYNNNNRTG 2 cut(s) 679, 761
SapI GCTCTTC 1 cut(s) 285
SaqAI TTAA 3 cut(s) 120, 798, 973
SatI GCNGC 7 cut(s) 162, 354, 444, 447, 534, 807, 912
Sau3AI GATC 7 cut(s) 247, 297, 340, 461, 671, 736, 953
Sau96I GGNCC 2 cut(s) 35, 218
SchI GAGTC 2 cut(s) 27, 685
ScrFI CCNGG 3 cut(s) 183, 222, 420
SduI GDGCHC 1 cut(s) 281
SfaNI GCATC 1 cut(s) 365
SfcI CTRYAG 2 cut(s) 306, 648
Sfr274I CTCGAG 2 cut(s) 597, 813
SinI GGWCC 2 cut(s) 35, 218
SlaI CTCGAG 2 cut(s) 597, 813
SmiMI CAYNNNNRTG 2 cut(s) 679, 761
SmlI CTYRAG 5 cut(s) 537, 597, 813, 906, 932
SmoI CTYRAG 5 cut(s) 537, 597, 813, 906, 932
SphI GCATGC 1 cut(s) 684
Sse9I AATT 3 cut(s) 121, 799, 821
SseBI AGGCCT 1 cut(s) 787
SsiI CCGC 3 cut(s) 142, 287, 874
SspMI CTAG 3 cut(s) 783, 789, 827
StuI AGGCCT 1 cut(s) 787
StyD4I CCNGG 3 cut(s) 181, 220, 418
StyI CCWWGG 2 cut(s) 369, 490
TaaI ACNGT 4 cut(s) 349, 502, 514, 774
TaiI ACGT 1 cut(s) 170
TaqI TCGA 5 cut(s) 16, 598, 630, 814, 880
TasI AATT 3 cut(s) 121, 799, 821
TfiI GAWTC 1 cut(s) 644
Tru1I TTAA 3 cut(s) 120, 798, 973
Tru9I TTAA 3 cut(s) 120, 798, 973
TscAI CASTG 5 cut(s) 482, 505, 681, 768, 777
TseFI GTSAC 3 cut(s) 205, 557, 768
TseI GCWGC 7 cut(s) 161, 353, 443, 446, 533, 806, 911
Tsp45I GTSAC 3 cut(s) 205, 557, 768
TspDTI ATGAA 1 cut(s) 115
TspRI CASTG 5 cut(s) 482, 505, 681, 768, 777
VpaK11BI GGWCC 2 cut(s) 35, 218
XceI RCATGY 1 cut(s) 684
XcmI CCANNNNNNNNNTGG 2 cut(s) 29, 446
XhoI CTCGAG 2 cut(s) 597, 813
XmiI GTMKAC 1 cut(s) 135
XspI CTAG 3 cut(s) 783, 789, 827
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.