FvH4_7g27140

quinone oxidoreductase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
20339462 .. 20342152
2691 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g27140.t1

Sequence Viewer

Length: 1131 bp
ATGGGTTCACTTCGAATGTCAAGTTTCCAGTTGGTTCCACAAGTTTACACTCATTCGATTCTCAGCAAAACCAGGGTCATCTGTTCACTCAGAACCCAGAAATCACTAGTTAGAGCTCTTGCAACTCAAGCATCATCTTCATCATCATCAGCTAAGATGGTCAAAGGCATTAGAGTCTATGAACATGGTGGACCTGAGGTCTTGAAATGGGAAGATGTGGAAGTTGGAGAGCCTAAGGAGGGTGAAGTTCGTGTGAAGAACAAGGCCATTGGGCTTAATTTCATTGATGTCTACTTCCGCAAAGGGATTTATAAGACTCCTTCAATTCCTTACATCCCAGGTGTGGAGGCTTGTGGAGTTGTGACAGCTGTGGGACCTGGACTAACCGGCAGGCAAGTTGGAGATGTTGTAGCCTTTGCTGGTGGTGCAACGGGCTCCTATGTGGAAGAGCAGATCCTTCCAGCTAACAAAGTTGTTCCTGTTCCTCCTTCCATCGATCCTACTGTTGCCGCATCCCTCTTGCTTAAGGGCATGACAGCTCAGTTTCTACTGCGTCGTTGTTTCAAGGTGGAACCTGGACATACAATCCTTGTTCATGCAGCAGCTGGTGGAGTTGGATCCCTTTTATGCCAGTGGGCTAATGCCCTTGGTGCGACTGTCATTGGAACTGTATCAACTAAAGAGAAGGCAGCTCAAGCCAAGGAAGATGGCTGTCACCATGTCATAATCAACAAGGAAGAGGACTTTGTTGCTCGTGTGACTGAAATAACATCTGGCAATGGGGTTGAAGTTGTCTACGATTCTGTAGGGAAGGATACGTTTGAGGGATCATTAACATGCCTGAAGTCTCGTGGATACATGGTGAGTTTTGGGCAGTCATCAGGTGCACCAGATCCAGTTCCATTATCAGCTCTTTCAGTGAAGTCACTGTTCTTGACCAGGCCTTCCCTCTTCCATTACACAGCTACTCGAGACGAATTGTTAGAGACCGCAGGAGAGGTATTTGCTAGTGTTGATGCAGGTATATTGCGGGTTCGAGTAAATCACACCTACTCATTGTCTGAAGCAGCACTTGCACATTCGGACCTGGAGAACAGGAAAACATCTGGATCTGTTGTGCTTATCCCCTAA

Protein Analysis

377

Amino Acids

39.96

Weight (kDa)

8.43

Isoelectric Point (pI)

33.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 80 - 162 1.7e-14 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 204 - 323 1.7e-25 Zinc-binding dehydrogenase
ADH_zinc_N_2 PF13602 237 - 374 5.7e-19 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 312
Acc36I ACCTGC 1 cut(s) 1010
AccI GTMKAC 2 cut(s) 291, 795
AciI CCGC 4 cut(s) 298, 510, 990, 1030
AclWI GGATC 7 cut(s) 448, 491, 612, 625, 835, 887, 1117
AcuI CTGAAG 2 cut(s) 863, 1083
AfiI CCNNNNNNNGG 2 cut(s) 239, 343
AflII CTTAAG 1 cut(s) 524
AgsI TTSAA 4 cut(s) 205, 324, 565, 788
AhdI GACNNNNNGTC 1 cut(s) 197
AhlI ACTAGT 1 cut(s) 106
AjnI CCWGG 6 cut(s) 71, 337, 376, 574, 938, 1086
AluBI AGCT 9 cut(s) 116, 152, 368, 464, 539, 605, 692, 911, 965
AluI AGCT 9 cut(s) 116, 152, 368, 464, 539, 605, 692, 911, 965
Alw21I GWGCWC 2 cut(s) 118, 889
Alw26I GTCTC 3 cut(s) 852, 966, 980
Alw44I GTGCAC 1 cut(s) 885
AlwI GGATC 7 cut(s) 448, 491, 612, 625, 835, 887, 1117
AlwNI CAGNNNCTG 1 cut(s) 605
Ama87I CYCGRG 1 cut(s) 969
AoxI GGCC 2 cut(s) 264, 941
ApaLI GTGCAC 1 cut(s) 885
ApeKI GCWGC 4 cut(s) 599, 602, 689, 1067
ArsI GACNNNNNNTTYG 2 cut(s) 60, 92
AspS9I GGNCC 3 cut(s) 191, 374, 1084
AsuHPI GGTGA 3 cut(s) 254, 707, 874
AsuII TTCGAA 1 cut(s) 13
AvaI CYCGRG 1 cut(s) 969
AvaII GGWCC 3 cut(s) 191, 374, 1084
AxyI CCTNAGG 2 cut(s) 195, 234
BaeGI GKGCMC 1 cut(s) 889
BamHI GGATCC 1 cut(s) 617
BanII GRGCYC 2 cut(s) 118, 437
BauI CACGAG 2 cut(s) 753, 849
Bbv12I GWGCWC 2 cut(s) 118, 889
BbvI GCAGC 4 cut(s) 611, 614, 701, 1079
BccI CCATC 3 cut(s) 151, 500, 701
BciT130I CCWGG 6 cut(s) 73, 339, 378, 576, 940, 1088
BciVI GTATCC 2 cut(s) 808, 848
BcoDI GTCTC 3 cut(s) 852, 966, 980
BcuI ACTAGT 1 cut(s) 106
BfaI CTAG 2 cut(s) 107, 1008
BfmI CTRYAG 1 cut(s) 804
BfrI CTTAAG 1 cut(s) 524
BfuAI ACCTGC 1 cut(s) 1010
BfuI GTATCC 2 cut(s) 808, 848
BisI GCNGC 5 cut(s) 510, 600, 603, 690, 1068
BlsI GCNGC 5 cut(s) 511, 601, 604, 691, 1069
Bme1390I CCNGG 6 cut(s) 73, 339, 378, 576, 940, 1088
Bme18I GGWCC 3 cut(s) 191, 374, 1084
BmeRI GACNNNNNGTC 1 cut(s) 197
BmeT110I CYCGRG 1 cut(s) 969
BmgT120I GGNCC 3 cut(s) 191, 374, 1084
BmiI GGNNCC 5 cut(s) 36, 375, 436, 573, 619
BmrFI CCNGG 6 cut(s) 73, 339, 378, 576, 940, 1088
BmsI GCATC 3 cut(s) 140, 521, 1006
BpmI CTGGAG 1 cut(s) 1109
Bpu14I TTCGAA 1 cut(s) 13
BpuEI CTTGAG 2 cut(s) 111, 678
Bsa29I ATCGAT 1 cut(s) 495
BsaI GGTCTC 1 cut(s) 980
BsaJI CCNNGG 4 cut(s) 72, 337, 646, 699
BsaXI ACNNNNNCTCC 2 cut(s) 393, 423
Bsc4I CCNNNNNNNGG 2 cut(s) 239, 343
Bse118I RCCGGY 1 cut(s) 386
Bse1I ACTGG 3 cut(s) 28, 631, 896
Bse21I CCTNAGG 2 cut(s) 195, 234
Bse3DI GCAATG 1 cut(s) 784
BseBI CCWGG 6 cut(s) 73, 339, 378, 576, 940, 1088
BseCI ATCGAT 1 cut(s) 495
BseDI CCNNGG 4 cut(s) 72, 337, 646, 699
BseGI GGATG 2 cut(s) 333, 512
BseLI CCNNNNNNNGG 2 cut(s) 239, 343
BseMI GCAATG 1 cut(s) 784
BseMII CTCAG 4 cut(s) 76, 103, 186, 554
BseNI ACTGG 3 cut(s) 28, 631, 896
BseSI GKGCMC 1 cut(s) 889
BseXI GCAGC 4 cut(s) 611, 614, 701, 1079
BshFI GGCC 2 cut(s) 266, 943
BshVI ATCGAT 1 cut(s) 495
BsiHKAI GWGCWC 2 cut(s) 118, 889
BsiHKCI CYCGRG 1 cut(s) 969
BsiSI CCGG 1 cut(s) 387
BslFI GGGAC 1 cut(s) 387
BslI CCNNNNNNNGG 2 cut(s) 239, 343
BsmAI GTCTC 3 cut(s) 852, 966, 980
BsmBI CGTCTC 1 cut(s) 966
BsmFI GGGAC 1 cut(s) 387
BsnI GGCC 2 cut(s) 266, 943
Bso31I GGTCTC 1 cut(s) 980
BsoBI CYCGRG 1 cut(s) 969
Bsp119I TTCGAA 1 cut(s) 13
Bsp1286I GDGCHC 3 cut(s) 118, 437, 889
Bsp143I GATC 6 cut(s) 453, 496, 617, 827, 892, 1109
BspACI CCGC 4 cut(s) 298, 510, 990, 1030
BspANI GGCC 2 cut(s) 266, 943
BspCNI CTCAG 4 cut(s) 75, 102, 187, 553
BspDI ATCGAT 1 cut(s) 495
BspLI GGNNCC 5 cut(s) 36, 375, 436, 573, 619
BspMI ACCTGC 1 cut(s) 1010
BspPI GGATC 7 cut(s) 448, 491, 612, 625, 835, 887, 1117
BspQI GCTCTTC 1 cut(s) 441
BspT104I TTCGAA 1 cut(s) 13
BspTI CTTAAG 1 cut(s) 524
BspTNI GGTCTC 1 cut(s) 980
BsrDI GCAATG 1 cut(s) 784
BsrFI RCCGGY 1 cut(s) 386
BsrI ACTGG 3 cut(s) 28, 631, 896
BssAI RCCGGY 1 cut(s) 386
BssECI CCNNGG 4 cut(s) 72, 337, 646, 699
BssMI GATC 6 cut(s) 453, 496, 617, 827, 892, 1109
BssSI CACGAG 2 cut(s) 753, 849
BssT1I CCWWGG 2 cut(s) 646, 699
Bst2BI CACGAG 2 cut(s) 753, 849
Bst2UI CCWGG 6 cut(s) 73, 339, 378, 576, 940, 1088
Bst4CI ACNGT 4 cut(s) 505, 658, 670, 930
Bst6I CTCTTC 3 cut(s) 441, 732, 956
BstAFI CTTAAG 1 cut(s) 524
BstAPI GCANNNNNTGC 1 cut(s) 1073
BstBI TTCGAA 1 cut(s) 13
BstC8I GCNNGC 1 cut(s) 392
BstDEI CTNAG 6 cut(s) 62, 89, 153, 195, 234, 540
BstF5I GGATG 2 cut(s) 333, 512
BstKTI GATC 6 cut(s) 456, 499, 620, 830, 895, 1112
BstMAI GTCTC 3 cut(s) 852, 966, 980
BstMBI GATC 6 cut(s) 453, 496, 617, 827, 892, 1109
BstMWI GCNNNNNNNGC 5 cut(s) 128, 425, 650, 695, 1073
BstNI CCWGG 6 cut(s) 73, 339, 378, 576, 940, 1088
BstNSI RCATGY 1 cut(s) 840
BstSCI CCNGG 6 cut(s) 71, 337, 376, 574, 938, 1086
BstSFI CTRYAG 1 cut(s) 804
BstSLI GKGCMC 1 cut(s) 889
BstV1I GCAGC 4 cut(s) 611, 614, 701, 1079
BstX2I RGATCY 4 cut(s) 453, 617, 892, 1109
BstYI RGATCY 4 cut(s) 453, 617, 892, 1109
Bsu15I ATCGAT 1 cut(s) 495
Bsu36I CCTNAGG 2 cut(s) 195, 234
BsuI GTATCC 2 cut(s) 808, 848
BsuRI GGCC 2 cut(s) 266, 943
BsuTUI ATCGAT 1 cut(s) 495
BtsCI GGATG 2 cut(s) 333, 512
BtsIMutI CAGTG 3 cut(s) 638, 924, 926
BveI ACCTGC 1 cut(s) 1010
Cac8I GCNNGC 1 cut(s) 392
CaiI CAGNNNCTG 1 cut(s) 605
Cfr10I RCCGGY 1 cut(s) 386
Cfr13I GGNCC 3 cut(s) 191, 374, 1084
ClaI ATCGAT 1 cut(s) 495
CseI GACGC 1 cut(s) 542
CviAII CATG 6 cut(s) 185, 532, 596, 719, 837, 859
DdeI CTNAG 6 cut(s) 62, 89, 153, 195, 234, 540
DpnI GATC 6 cut(s) 455, 498, 619, 829, 894, 1111
DpnII GATC 6 cut(s) 453, 496, 617, 827, 892, 1109
DriI GACNNNNNGTC 1 cut(s) 197
Eam1104I CTCTTC 3 cut(s) 441, 732, 956
Eam1105I GACNNNNNGTC 1 cut(s) 197
EarI CTCTTC 3 cut(s) 441, 732, 956
Ecl136II GAGCTC 1 cut(s) 116
Eco130I CCWWGG 2 cut(s) 646, 699
Eco147I AGGCCT 1 cut(s) 943
Eco24I GRGCYC 2 cut(s) 118, 437
Eco31I GGTCTC 1 cut(s) 980
Eco47I GGWCC 3 cut(s) 191, 374, 1084
Eco53kI GAGCTC 1 cut(s) 116
Eco57I CTGAAG 2 cut(s) 863, 1083
Eco81I CCTNAGG 2 cut(s) 195, 234
Eco88I CYCGRG 1 cut(s) 969
EcoICRI GAGCTC 1 cut(s) 116
EcoO109I RGGNCCY 1 cut(s) 374
EcoRII CCWGG 6 cut(s) 71, 337, 376, 574, 938, 1086
EcoT14I CCWWGG 2 cut(s) 646, 699
EcoT38I GRGCYC 2 cut(s) 118, 437
ErhI CCWWGG 2 cut(s) 646, 699
Esp3I CGTCTC 1 cut(s) 966
FaeI CATG 6 cut(s) 188, 535, 599, 722, 840, 862
FalI AAGNNNNNCTT 2 cut(s) 1056, 1088
FaqI GGGAC 1 cut(s) 387
FatI CATG 6 cut(s) 184, 531, 595, 718, 836, 858
FauI CCCGC 1 cut(s) 1023
FblI GTMKAC 2 cut(s) 291, 795
Fnu4HI GCNGC 5 cut(s) 510, 600, 603, 690, 1068
FokI GGATG 2 cut(s) 320, 499
FriOI GRGCYC 2 cut(s) 118, 437
Fsp4HI GCNGC 5 cut(s) 510, 600, 603, 690, 1068
FspBI CTAG 2 cut(s) 107, 1008
GluI GCNGC 5 cut(s) 510, 600, 603, 690, 1068
GsuI CTGGAG 1 cut(s) 1109
HaeIII GGCC 2 cut(s) 266, 943
HapII CCGG 1 cut(s) 387
HgaI GACGC 1 cut(s) 542
Hin1II CATG 6 cut(s) 188, 535, 599, 722, 840, 862
HinfI GANTC 4 cut(s) 58, 174, 316, 800
HpaII CCGG 1 cut(s) 387
HphI GGTGA 3 cut(s) 254, 707, 874
Hpy166II GTNNAC 7 cut(s) 8, 46, 86, 191, 292, 796, 887
Hpy188I TCNGA 3 cut(s) 92, 1063, 1084
Hpy188III TCNNGA 4 cut(s) 202, 934, 971, 1107
Hpy8I GTNNAC 7 cut(s) 8, 46, 86, 191, 292, 796, 887
Hpy99I CGWCG 1 cut(s) 558
HpyAV CCTTC 6 cut(s) 330, 467, 498, 679, 805, 954
HpyCH4III ACNGT 4 cut(s) 505, 658, 670, 930
HpyCH4IV ACGT 1 cut(s) 818
HpyCH4V TGCA 6 cut(s) 122, 428, 599, 887, 1019, 1076
HpyF10VI GCNNNNNNNGC 5 cut(s) 128, 425, 650, 695, 1073
HpyF3I CTNAG 6 cut(s) 62, 89, 153, 195, 234, 540
HpySE526I ACGT 1 cut(s) 818
Hsp92II CATG 6 cut(s) 188, 535, 599, 722, 840, 862
Kzo9I GATC 6 cut(s) 453, 496, 617, 827, 892, 1109
LguI GCTCTTC 1 cut(s) 441
LmnI GCTCC 1 cut(s) 440
Lsp1109I GCAGC 4 cut(s) 611, 614, 701, 1079
LweI GCATC 3 cut(s) 140, 521, 1006
MaeI CTAG 2 cut(s) 107, 1008
MaeII ACGT 1 cut(s) 818
MaeIII GTNAC 4 cut(s) 361, 713, 757, 924
MalI GATC 6 cut(s) 455, 498, 619, 829, 894, 1111
MboI GATC 6 cut(s) 453, 496, 617, 827, 892, 1109
MboII GAAGA 7 cut(s) 129, 224, 268, 458, 716, 749, 943
MflI RGATCY 4 cut(s) 453, 617, 892, 1109
MhlI GDGCHC 3 cut(s) 118, 437, 889
MluCI AATT 3 cut(s) 277, 324, 977
MlyI GAGTC 2 cut(s) 183, 310
MmeI TCCRAC 3 cut(s) 205, 379, 595
MnlI CCTC 9 cut(s) 190, 232, 340, 495, 527, 733, 817, 959, 991
MseI TTAA 3 cut(s) 276, 525, 833
MslI CAYNNNNRTG 1 cut(s) 835
MspA1I CMGCKG 2 cut(s) 368, 605
MspCI CTTAAG 1 cut(s) 524
MspI CCGG 1 cut(s) 387
MspR9I CCNGG 6 cut(s) 73, 339, 378, 576, 940, 1088
MvaI CCWGG 6 cut(s) 73, 339, 378, 576, 940, 1088
MwoI GCNNNNNNNGC 5 cut(s) 128, 425, 650, 695, 1073
NdeII GATC 6 cut(s) 453, 496, 617, 827, 892, 1109
NlaIII CATG 6 cut(s) 188, 535, 599, 722, 840, 862
NlaIV GGNNCC 5 cut(s) 36, 375, 436, 573, 619
NmuCI GTSAC 4 cut(s) 361, 713, 757, 924
NspI RCATGY 1 cut(s) 840
NspV TTCGAA 1 cut(s) 13
PaeR7I CTCGAG 1 cut(s) 969
PceI AGGCCT 1 cut(s) 943
PciSI GCTCTTC 1 cut(s) 441
PfeI GAWTC 2 cut(s) 58, 800
PkrI GCNGC 5 cut(s) 511, 601, 604, 691, 1069
PleI GAGTC 2 cut(s) 182, 310
PpsI GAGTC 2 cut(s) 182, 310
PpuMI RGGWCCY 1 cut(s) 374
PsiI TTATAA 1 cut(s) 312
Psp124BI GAGCTC 1 cut(s) 118
Psp5II RGGWCCY 1 cut(s) 374
Psp6I CCWGG 6 cut(s) 71, 337, 376, 574, 938, 1086
PspGI CCWGG 6 cut(s) 71, 337, 376, 574, 938, 1086
PspN4I GGNNCC 5 cut(s) 36, 375, 436, 573, 619
PspPI GGNCC 3 cut(s) 191, 374, 1084
PspPPI RGGWCCY 1 cut(s) 374
PstNI CAGNNNCTG 1 cut(s) 605
PsuI RGATCY 4 cut(s) 453, 617, 892, 1109
PvuII CAGCTG 2 cut(s) 368, 605
RseI CAYNNNNRTG 1 cut(s) 835
SacI GAGCTC 1 cut(s) 118
SapI GCTCTTC 1 cut(s) 441
SaqAI TTAA 3 cut(s) 276, 525, 833
SatI GCNGC 5 cut(s) 510, 600, 603, 690, 1068
Sau3AI GATC 6 cut(s) 453, 496, 617, 827, 892, 1109
Sau96I GGNCC 3 cut(s) 191, 374, 1084
SchI GAGTC 2 cut(s) 183, 310
ScrFI CCNGG 6 cut(s) 73, 339, 378, 576, 940, 1088
SduI GDGCHC 3 cut(s) 118, 437, 889
SfaNI GCATC 3 cut(s) 140, 521, 1006
SfcI CTRYAG 1 cut(s) 804
Sfr274I CTCGAG 1 cut(s) 969
SfuI TTCGAA 1 cut(s) 13
SinI GGWCC 3 cut(s) 191, 374, 1084
SlaI CTCGAG 1 cut(s) 969
SmiMI CAYNNNNRTG 1 cut(s) 835
SmlI CTYRAG 4 cut(s) 126, 524, 693, 969
SmoI CTYRAG 4 cut(s) 126, 524, 693, 969
SpeI ACTAGT 1 cut(s) 106
Sse9I AATT 3 cut(s) 277, 324, 977
SseBI AGGCCT 1 cut(s) 943
SsiI CCGC 4 cut(s) 298, 510, 990, 1030
SspMI CTAG 2 cut(s) 107, 1008
SstI GAGCTC 1 cut(s) 118
StuI AGGCCT 1 cut(s) 943
StyD4I CCNGG 6 cut(s) 71, 337, 376, 574, 938, 1086
StyI CCWWGG 2 cut(s) 646, 699
TaaI ACNGT 4 cut(s) 505, 658, 670, 930
TaiI ACGT 1 cut(s) 821
TaqI TCGA 5 cut(s) 13, 56, 495, 970, 1036
TasI AATT 3 cut(s) 277, 324, 977
TauI GCSGC 1 cut(s) 512
TfiI GAWTC 2 cut(s) 58, 800
Tru1I TTAA 3 cut(s) 276, 525, 833
Tru9I TTAA 3 cut(s) 276, 525, 833
TscAI CASTG 3 cut(s) 638, 924, 933
TseFI GTSAC 4 cut(s) 361, 713, 757, 924
TseI GCWGC 4 cut(s) 599, 602, 689, 1067
Tsp45I GTSAC 4 cut(s) 361, 713, 757, 924
TspDTI ATGAA 4 cut(s) 129, 195, 271, 584
TspRI CASTG 3 cut(s) 638, 924, 933
Vha464I CTTAAG 1 cut(s) 524
VneI GTGCAC 1 cut(s) 885
VpaK11BI GGWCC 3 cut(s) 191, 374, 1084
XceI RCATGY 1 cut(s) 840
XhoI CTCGAG 1 cut(s) 969
XmiI GTMKAC 2 cut(s) 291, 795
XspI CTAG 2 cut(s) 107, 1008
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.