Prupe.2G274500_v2.0.a1

quinone oxidoreductase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
27669972 .. 27673755
3784 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G274500.1

Sequence Viewer

Length: 1164 bp
ATGGGTCTACTTCCAATCAGACTAAGATTCCAGAACCATCGTTCAGCACAATTGCTGTGTGCTTCATACCATTTCATTCCAAATTCGAGACATTTTTCACAGATTAAGTGTTTACCCTTTACACTTAGGACCCGTAAATCAGTAGTTAGAGCACTTGCCACTGAATCAGCATCACCACCAGCAGCAAAGATGGTCAAAGCCATTCGAGTCCATGAGCTTGGTGGACCTGAGGTCTTGAAATGGGAAGATGTGGAAGTAGGAGAGCCAAAGGAGGGAGAGGTCCGTGTGAAGAACAAGGCCATTGGGATTAATTTCATTGATGTATACTTCCGCAAAGGCGTTTATAAGGCTGCTACGGTTCCCTACACCCCAGGTGTTGAGGCTTGTGGAGTTGTGACAGCTGTCGGACCAGGACTAACAGGCAGGCAAGTTGGAGATCTTGTAGCCTATGCTGGTCAGCCAATGGGCTCATATGCTGAAGAGCAGATCCTTCCTGCAAACAGAGTTGTGCCTGTTCCTCCTTCCATTGATCCTACTGTTGCTGCATCCCTCTTGCTCAAGGGTATGACAGCTCAGTTTCTACTACGCAGCTGTTTCAAGGTTGAACCTGGACACACAGTCCTCGTCCATGCAGCAGCTGGTGGAGTTGGATCCCTTTTATGCCAGTGGGCTAATTCCCTTGGTGCCACTGTCATTGGAACTGTATCTACTAAAGAGAAGGCAGCTCAAGCCAAGGAGGATGGATGTCACCATGTCATAATCTATAAGGAAGAGGACTTTGTTGCTCGAGTGAAAGAAATAACATCTGACAATGGGGTTGAGGTTGTTTATGATTCTGTAGGGAAGGATACTTTTGAGGGATCACTGGCATGCTTGAAGACTCGTGGATACATGGTGAGTTTTGGGCAGTCATCAGGTGCGCCAGATCCGGTTCCATTGTCAGCCATTGCAGTGAAGTCACTGTTCTTGACTAGGCCTAGCCTCTTTCATTACGCTGTAACTCGAGACGAATTGCTAGGGATGGCGGGAGAGGTATTTGGTAATGTTCAATCAGGTGTATTGCGGGTTCGAGTAAATCACACCTACCCATTGTCTCAAGCAGTACAGGCACACGAAGACCTTGAGAATAGGAAAACATCTGGATCTGTTGTGCTTATCCCCTAA

Protein Analysis

388

Amino Acids

41.62

Weight (kDa)

8.85

Isoelectric Point (pI)

40.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 345
AccB1I GGYRCC 1 cut(s) 683
AccI GTMKAC 2 cut(s) 7, 324
AciI CCGC 3 cut(s) 331, 1025, 1063
AclWI GGATC 7 cut(s) 481, 524, 645, 658, 868, 920, 1150
AcsI RAATTY 1 cut(s) 82
AcuI CTGAAG 1 cut(s) 498
AfaI GTAC 1 cut(s) 1104
AfiI CCNNNNNNNGG 1 cut(s) 272
AgsI TTSAA 5 cut(s) 238, 598, 605, 877, 1049
AhdI GACNNNNNGTC 2 cut(s) 230, 617
AjnI CCWGG 3 cut(s) 370, 409, 607
AluBI AGCT 6 cut(s) 217, 401, 572, 591, 638, 725
AluI AGCT 6 cut(s) 217, 401, 572, 591, 638, 725
Alw21I GWGCWC 1 cut(s) 154
Alw26I GTCTC 3 cut(s) 82, 999, 1098
AlwI GGATC 7 cut(s) 481, 524, 645, 658, 868, 920, 1150
AlwNI CAGNNNCTG 1 cut(s) 638
Ama87I CYCGRG 2 cut(s) 786, 1002
AoxI GGCC 2 cut(s) 297, 974
ApeKI GCWGC 7 cut(s) 182, 350, 542, 588, 632, 635, 722
ApoI RAATTY 1 cut(s) 82
AseI ATTAAT 1 cut(s) 309
AspLEI GCGC 1 cut(s) 922
AspS9I GGNCC 4 cut(s) 129, 224, 280, 407
AsuHPI GGTGA 3 cut(s) 165, 740, 907
AvaI CYCGRG 2 cut(s) 786, 1002
AvaII GGWCC 4 cut(s) 129, 224, 280, 407
AxyI CCTNAGG 1 cut(s) 228
BamHI GGATCC 1 cut(s) 650
BanI GGYRCC 1 cut(s) 683
BanII GRGCYC 1 cut(s) 470
BauI CACGAG 1 cut(s) 882
BbsI GAAGAC 2 cut(s) 884, 1122
Bbv12I GWGCWC 1 cut(s) 154
BbvI GCAGC 7 cut(s) 194, 337, 529, 600, 644, 647, 734
BccI CCATC 4 cut(s) 45, 184, 734, 1015
BciT130I CCWGG 3 cut(s) 372, 411, 609
BciVI GTATCC 2 cut(s) 841, 881
BcoDI GTCTC 3 cut(s) 82, 999, 1098
BfaI CTAG 3 cut(s) 972, 978, 1016
BfmI CTRYAG 1 cut(s) 837
BfuI GTATCC 2 cut(s) 841, 881
BglII AGATCT 1 cut(s) 436
BisI GCNGC 7 cut(s) 183, 351, 543, 589, 633, 636, 723
BlsI GCNGC 7 cut(s) 184, 352, 544, 590, 634, 637, 724
Bme1390I CCNGG 3 cut(s) 372, 411, 609
Bme18I GGWCC 4 cut(s) 129, 224, 280, 407
BmeRI GACNNNNNGTC 2 cut(s) 230, 617
BmeT110I CYCGRG 2 cut(s) 786, 1002
BmgT120I GGNCC 4 cut(s) 129, 224, 280, 407
BmiI GGNNCC 5 cut(s) 131, 360, 652, 685, 933
BmrFI CCNGG 3 cut(s) 372, 411, 609
BmsI GCATC 2 cut(s) 179, 554
BoxI GACNNNNGTC 1 cut(s) 401
BpiI GAAGAC 2 cut(s) 884, 1122
BpuEI CTTGAG 4 cut(s) 542, 711, 1080, 1142
BsaJI CCNNGG 3 cut(s) 370, 679, 732
BsaWI WCCGGW 1 cut(s) 928
BsaXI ACNNNNNCTCC 2 cut(s) 426, 456
Bsc4I CCNNNNNNNGG 1 cut(s) 272
Bse1I ACTGG 2 cut(s) 664, 870
Bse21I CCTNAGG 1 cut(s) 228
Bse3DI GCAATG 1 cut(s) 945
BseBI CCWGG 3 cut(s) 372, 411, 609
BseDI CCNNGG 3 cut(s) 370, 679, 732
BseGI GGATG 4 cut(s) 545, 745, 749, 1026
BseLI CCNNNNNNNGG 1 cut(s) 272
BseMI GCAATG 1 cut(s) 945
BseMII CTCAG 2 cut(s) 219, 587
BseNI ACTGG 2 cut(s) 664, 870
BseXI GCAGC 7 cut(s) 194, 337, 529, 600, 644, 647, 734
BshFI GGCC 2 cut(s) 299, 976
BshNI GGYRCC 1 cut(s) 683
BsiHKAI GWGCWC 1 cut(s) 154
BsiHKCI CYCGRG 2 cut(s) 786, 1002
BsiSI CCGG 1 cut(s) 929
BslI CCNNNNNNNGG 1 cut(s) 272
BsmAI GTCTC 3 cut(s) 82, 999, 1098
BsmBI CGTCTC 1 cut(s) 999
BsnI GGCC 2 cut(s) 299, 976
BsoBI CYCGRG 2 cut(s) 786, 1002
Bsp1286I GDGCHC 2 cut(s) 154, 470
Bsp143I GATC 7 cut(s) 436, 486, 529, 650, 860, 925, 1142
BspACI CCGC 3 cut(s) 331, 1025, 1063
BspANI GGCC 2 cut(s) 299, 976
BspCNI CTCAG 2 cut(s) 220, 586
BspLI GGNNCC 5 cut(s) 131, 360, 652, 685, 933
BspPI GGATC 7 cut(s) 481, 524, 645, 658, 868, 920, 1150
BspQI GCTCTTC 1 cut(s) 474
BspT107I GGYRCC 1 cut(s) 683
BsrDI GCAATG 1 cut(s) 945
BsrI ACTGG 2 cut(s) 664, 870
BssECI CCNNGG 3 cut(s) 370, 679, 732
BssMI GATC 7 cut(s) 436, 486, 529, 650, 860, 925, 1142
BssNAI GTATAC 1 cut(s) 325
BssSI CACGAG 1 cut(s) 882
BssT1I CCWWGG 2 cut(s) 679, 732
Bst1107I GTATAC 1 cut(s) 325
Bst2BI CACGAG 1 cut(s) 882
Bst2UI CCWGG 3 cut(s) 372, 411, 609
Bst4CI ACNGT 6 cut(s) 358, 538, 619, 691, 703, 963
Bst6I CTCTTC 2 cut(s) 474, 765
BstC8I GCNNGC 2 cut(s) 425, 871
BstDEI CTNAG 4 cut(s) 23, 125, 228, 573
BstF5I GGATG 4 cut(s) 545, 745, 749, 1026
BstHHI GCGC 1 cut(s) 922
BstKTI GATC 7 cut(s) 439, 489, 532, 653, 863, 928, 1145
BstMAI GTCTC 3 cut(s) 82, 999, 1098
BstMBI GATC 7 cut(s) 436, 486, 529, 650, 860, 925, 1142
BstMWI GCNNNNNNNGC 2 cut(s) 728, 1106
BstNI CCWGG 3 cut(s) 372, 411, 609
BstNSI RCATGY 1 cut(s) 873
BstPAI GACNNNNGTC 1 cut(s) 401
BstSCI CCNGG 3 cut(s) 370, 409, 607
BstSFI CTRYAG 1 cut(s) 837
BstV1I GCAGC 7 cut(s) 194, 337, 529, 600, 644, 647, 734
BstV2I GAAGAC 2 cut(s) 884, 1122
BstX2I RGATCY 5 cut(s) 436, 486, 650, 925, 1142
BstXI CCANNNNNNTGG 1 cut(s) 218
BstYI RGATCY 5 cut(s) 436, 486, 650, 925, 1142
BstZ17I GTATAC 1 cut(s) 325
Bsu36I CCTNAGG 1 cut(s) 228
BsuI GTATCC 2 cut(s) 841, 881
BsuRI GGCC 2 cut(s) 299, 976
BtsCI GGATG 4 cut(s) 545, 745, 749, 1026
BtsI GCAGTG 1 cut(s) 957
BtsIMutI CAGTG 6 cut(s) 159, 671, 687, 863, 957, 959
Cac8I GCNNGC 2 cut(s) 425, 871
CaiI CAGNNNCTG 1 cut(s) 638
CfoI GCGC 1 cut(s) 922
Cfr13I GGNCC 4 cut(s) 129, 224, 280, 407
Csp6I GTAC 1 cut(s) 1103
CspCI CAANNNNNGTGG 2 cut(s) 676, 711
CviAII CATG 5 cut(s) 212, 629, 752, 870, 892
CviQI GTAC 1 cut(s) 1103
DdeI CTNAG 4 cut(s) 23, 125, 228, 573
DpnI GATC 7 cut(s) 438, 488, 531, 652, 862, 927, 1144
DpnII GATC 7 cut(s) 436, 486, 529, 650, 860, 925, 1142
DriI GACNNNNNGTC 2 cut(s) 230, 617
Eam1104I CTCTTC 2 cut(s) 474, 765
Eam1105I GACNNNNNGTC 2 cut(s) 230, 617
EarI CTCTTC 2 cut(s) 474, 765
Eco130I CCWWGG 2 cut(s) 679, 732
Eco147I AGGCCT 1 cut(s) 976
Eco24I GRGCYC 1 cut(s) 470
Eco47I GGWCC 4 cut(s) 129, 224, 280, 407
Eco57I CTGAAG 1 cut(s) 498
Eco81I CCTNAGG 1 cut(s) 228
Eco88I CYCGRG 2 cut(s) 786, 1002
EcoO109I RGGNCCY 1 cut(s) 129
EcoRII CCWGG 3 cut(s) 370, 409, 607
EcoT14I CCWWGG 2 cut(s) 679, 732
EcoT38I GRGCYC 1 cut(s) 470
ErhI CCWWGG 2 cut(s) 679, 732
Esp3I CGTCTC 1 cut(s) 999
FaeI CATG 5 cut(s) 215, 632, 755, 873, 895
FatI CATG 5 cut(s) 211, 628, 751, 869, 891
FauI CCCGC 2 cut(s) 1018, 1056
FauNDI CATATG 1 cut(s) 472
FblI GTMKAC 2 cut(s) 7, 324
Fnu4HI GCNGC 7 cut(s) 183, 351, 543, 589, 633, 636, 723
FokI GGATG 4 cut(s) 532, 752, 756, 1033
FriOI GRGCYC 1 cut(s) 470
Fsp4HI GCNGC 7 cut(s) 183, 351, 543, 589, 633, 636, 723
FspBI CTAG 3 cut(s) 972, 978, 1016
GlaI GCGC 1 cut(s) 921
GluI GCNGC 7 cut(s) 183, 351, 543, 589, 633, 636, 723
HaeIII GGCC 2 cut(s) 299, 976
HapII CCGG 1 cut(s) 929
HhaI GCGC 1 cut(s) 922
Hin1II CATG 5 cut(s) 215, 632, 755, 873, 895
Hin6I GCGC 1 cut(s) 920
HinP1I GCGC 1 cut(s) 920
HinfI GANTC 5 cut(s) 27, 164, 207, 833, 880
HpaII CCGG 1 cut(s) 929
HphI GGTGA 3 cut(s) 165, 740, 907
Hpy166II GTNNAC 4 cut(s) 8, 113, 224, 325
Hpy188I TCNGA 3 cut(s) 20, 407, 808
Hpy188III TCNNGA 6 cut(s) 31, 87, 235, 967, 1004, 1140
Hpy8I GTNNAC 4 cut(s) 8, 113, 224, 325
HpyAV CCTTC 4 cut(s) 500, 531, 712, 838
HpyCH4III ACNGT 6 cut(s) 358, 538, 619, 691, 703, 963
HpyCH4V TGCA 4 cut(s) 497, 545, 632, 950
HpyF10VI GCNNNNNNNGC 2 cut(s) 728, 1106
HpyF3I CTNAG 4 cut(s) 23, 125, 228, 573
Hsp92II CATG 5 cut(s) 215, 632, 755, 873, 895
HspAI GCGC 1 cut(s) 920
Kzo9I GATC 7 cut(s) 436, 486, 529, 650, 860, 925, 1142
LguI GCTCTTC 1 cut(s) 474
Lsp1109I GCAGC 7 cut(s) 194, 337, 529, 600, 644, 647, 734
LweI GCATC 2 cut(s) 179, 554
MaeI CTAG 3 cut(s) 972, 978, 1016
MaeIII GTNAC 4 cut(s) 394, 746, 957, 997
MalI GATC 7 cut(s) 438, 488, 531, 652, 862, 927, 1144
MboI GATC 7 cut(s) 436, 486, 529, 650, 860, 925, 1142
MboII GAAGA 6 cut(s) 257, 301, 491, 782, 889, 1127
MfeI CAATTG 1 cut(s) 50
MflI RGATCY 5 cut(s) 436, 486, 650, 925, 1142
MhlI GDGCHC 2 cut(s) 154, 470
MluCI AATT 5 cut(s) 50, 82, 310, 673, 1010
MlyI GAGTC 2 cut(s) 216, 874
MmeI TCCRAC 3 cut(s) 385, 412, 628
MseI TTAA 2 cut(s) 105, 309
MslI CAYNNNNRTG 2 cut(s) 868, 950
MspA1I CMGCKG 3 cut(s) 401, 591, 638
MspI CCGG 1 cut(s) 929
MspR9I CCNGG 3 cut(s) 372, 411, 609
MunI CAATTG 1 cut(s) 50
MvaI CCWGG 3 cut(s) 372, 411, 609
MwoI GCNNNNNNNGC 2 cut(s) 728, 1106
NdeI CATATG 1 cut(s) 472
NdeII GATC 7 cut(s) 436, 486, 529, 650, 860, 925, 1142
NlaIII CATG 5 cut(s) 215, 632, 755, 873, 895
NlaIV GGNNCC 5 cut(s) 131, 360, 652, 685, 933
NmuCI GTSAC 3 cut(s) 394, 746, 957
NspI RCATGY 1 cut(s) 873
PaeI GCATGC 1 cut(s) 873
PaeR7I CTCGAG 2 cut(s) 786, 1002
PceI AGGCCT 1 cut(s) 976
PciSI GCTCTTC 1 cut(s) 474
PfeI GAWTC 3 cut(s) 27, 164, 833
PkrI GCNGC 7 cut(s) 184, 352, 544, 590, 634, 637, 724
PleI GAGTC 2 cut(s) 215, 874
PpsI GAGTC 2 cut(s) 215, 874
PpuMI RGGWCCY 1 cut(s) 129
PshAI GACNNNNGTC 1 cut(s) 401
PshBI ATTAAT 1 cut(s) 309
PsiI TTATAA 1 cut(s) 345
Psp5II RGGWCCY 1 cut(s) 129
Psp6I CCWGG 3 cut(s) 370, 409, 607
PspGI CCWGG 3 cut(s) 370, 409, 607
PspN4I GGNNCC 5 cut(s) 131, 360, 652, 685, 933
PspPI GGNCC 4 cut(s) 129, 224, 280, 407
PspPPI RGGWCCY 1 cut(s) 129
PspXI VCTCGAGB 1 cut(s) 786
PsrI GAACNNNNNNTAC 4 cut(s) 691, 723, 1050, 1082
PstNI CAGNNNCTG 1 cut(s) 638
PsuI RGATCY 5 cut(s) 436, 486, 650, 925, 1142
PvuII CAGCTG 3 cut(s) 401, 591, 638
RsaI GTAC 1 cut(s) 1104
RsaNI GTAC 1 cut(s) 1103
RseI CAYNNNNRTG 2 cut(s) 868, 950
SapI GCTCTTC 1 cut(s) 474
SaqAI TTAA 2 cut(s) 105, 309
SatI GCNGC 7 cut(s) 183, 351, 543, 589, 633, 636, 723
Sau3AI GATC 7 cut(s) 436, 486, 529, 650, 860, 925, 1142
Sau96I GGNCC 4 cut(s) 129, 224, 280, 407
SchI GAGTC 2 cut(s) 216, 874
ScrFI CCNGG 3 cut(s) 372, 411, 609
SduI GDGCHC 2 cut(s) 154, 470
SfaNI GCATC 2 cut(s) 179, 554
SfcI CTRYAG 1 cut(s) 837
Sfr274I CTCGAG 2 cut(s) 786, 1002
SinI GGWCC 4 cut(s) 129, 224, 280, 407
SlaI CTCGAG 2 cut(s) 786, 1002
SmiMI CAYNNNNRTG 2 cut(s) 868, 950
SmlI CTYRAG 6 cut(s) 557, 726, 786, 1002, 1095, 1121
SmoI CTYRAG 6 cut(s) 557, 726, 786, 1002, 1095, 1121
SphI GCATGC 1 cut(s) 873
Sse9I AATT 5 cut(s) 50, 82, 310, 673, 1010
SseBI AGGCCT 1 cut(s) 976
SsiI CCGC 3 cut(s) 331, 1025, 1063
SspMI CTAG 3 cut(s) 972, 978, 1016
StuI AGGCCT 1 cut(s) 976
StyD4I CCNGG 3 cut(s) 370, 409, 607
StyI CCWWGG 2 cut(s) 679, 732
TaaI ACNGT 6 cut(s) 358, 538, 619, 691, 703, 963
TaqI TCGA 5 cut(s) 86, 205, 787, 1003, 1069
TasI AATT 5 cut(s) 50, 82, 310, 673, 1010
TatI WGTACW 1 cut(s) 1102
TfiI GAWTC 3 cut(s) 27, 164, 833
Tru1I TTAA 2 cut(s) 105, 309
Tru9I TTAA 2 cut(s) 105, 309
TscAI CASTG 6 cut(s) 166, 671, 694, 870, 957, 966
TseFI GTSAC 3 cut(s) 394, 746, 957
TseI GCWGC 7 cut(s) 182, 350, 542, 588, 632, 635, 722
Tsp45I GTSAC 3 cut(s) 394, 746, 957
TspDTI ATGAA 4 cut(s) 54, 64, 304, 977
TspGWI ACGGA 1 cut(s) 272
TspRI CASTG 6 cut(s) 166, 671, 694, 870, 957, 966
VpaK11BI GGWCC 4 cut(s) 129, 224, 280, 407
VspI ATTAAT 1 cut(s) 309
XapI RAATTY 1 cut(s) 82
XceI RCATGY 1 cut(s) 873
XcmI CCANNNNNNNNNTGG 2 cut(s) 218, 635
XhoI CTCGAG 2 cut(s) 786, 1002
XmiI GTMKAC 2 cut(s) 7, 324
XspI CTAG 3 cut(s) 972, 978, 1016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.