quinone oxidoreductase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G61510 AT5G61510 |
| fragaria_vesca | FvH4_7g27132 FvH4_7g27132 FvH4_7g27132 FvH4_7g27132 FvH4_7g27140 |
| malus_domestica | MD01G1178400.v1.1 MD01G1179500.v1.1 MD01G1180600.v1.1 MD07G1250800.v1.1 MD07G1251000.v1.1 |
| prunus_persica | Prupe.2G133300_v2.0.a1 Prupe.2G133300_v2.0.a1 Prupe.2G274500_v2.0.a1 Prupe.2G274600_v2.0.a1 |
| pyrus_communis | pycom01g18920 pycom01g19010 pycom01g19080 pycom07g22370 |
| rosa_chinensis | RchiOBHm_Chr1g0363511 RchiOBHm_Chr1g0373931 RchiOBHm_Chr1g0373941 |
| rosa_laevigata | RLG00000026793 RLG00000026794 RLG00000027560 |
| rosa_multiflora | Rmu_sc0002022.1_g000001 Rmu_sc0002740.1_g000012 Rmu_sc0008820.1_g000007 |
| rosa_roxburghii | Rroxscaffold_4G00283890 Rroxscaffold_4G00293100 |
| rosa_rugosa | Rorug01G0308000 Rorug01G0379800 Rorug01G0379900 |
| rosa_samantha | Rh1AG316700 Rh1AG390100 Rh1AG390200 Rh1BG280100 Rh1BG354400 Rh1BG354500 Rh1CG296200 Rh1CG367500 Rh1CG367600 Rh1DG311300 Rh1DG385100 Rh1DG385200 |
| rosa_wichuraiana | Rw1G028070 Rw1G034500 Rw1G034510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 156 |
| AarI | CACCTGC | 1 cut(s) | 854 |
| Acc36I | ACCTGC | 1 cut(s) | 854 |
| AccB1I | GGYRCC | 1 cut(s) | 494 |
| AciI | CCGC | 4 cut(s) | 142, 198, 354, 874 |
| AclWI | GGATC | 6 cut(s) | 292, 456, 469, 679, 731, 961 |
| AcoI | YGGCCR | 1 cut(s) | 232 |
| AcuI | CTGAAG | 1 cut(s) | 927 |
| AfaI | GTAC | 3 cut(s) | 137, 427, 963 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 83, 148, 805 |
| AflII | CTTAAG | 1 cut(s) | 368 |
| AgsI | TTSAA | 5 cut(s) | 49, 168, 409, 632, 688 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 41, 428 |
| AjnI | CCWGG | 4 cut(s) | 181, 220, 418, 782 |
| AluBI | AGCT | 5 cut(s) | 212, 383, 449, 536, 755 |
| AluI | AGCT | 5 cut(s) | 212, 383, 449, 536, 755 |
| Alw21I | GWGCWC | 1 cut(s) | 733 |
| Alw26I | GTCTC | 2 cut(s) | 696, 824 |
| Alw44I | GTGCAC | 1 cut(s) | 729 |
| AlwI | GGATC | 6 cut(s) | 292, 456, 469, 679, 731, 961 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 449 |
| Ama87I | CYCGRG | 2 cut(s) | 597, 813 |
| AoxI | GGCC | 3 cut(s) | 108, 232, 785 |
| ApaLI | GTGCAC | 1 cut(s) | 729 |
| ApeKI | GCWGC | 4 cut(s) | 443, 446, 533, 911 |
| AspS9I | GGNCC | 2 cut(s) | 35, 218 |
| AsuHPI | GGTGA | 2 cut(s) | 551, 718 |
| AvaI | CYCGRG | 2 cut(s) | 597, 813 |
| AvaII | GGWCC | 2 cut(s) | 35, 218 |
| AxyI | CCTNAGG | 1 cut(s) | 39 |
| BaeGI | GKGCMC | 1 cut(s) | 733 |
| BamHI | GGATCC | 1 cut(s) | 461 |
| BanI | GGYRCC | 1 cut(s) | 494 |
| BanII | GRGCYC | 2 cut(s) | 78, 281 |
| BauI | CACGAG | 1 cut(s) | 693 |
| Bbv12I | GWGCWC | 1 cut(s) | 733 |
| BbvI | GCAGC | 4 cut(s) | 455, 458, 545, 923 |
| BccI | CCATC | 1 cut(s) | 545 |
| BceAI | ACGGC | 1 cut(s) | 822 |
| BciT130I | CCWGG | 4 cut(s) | 183, 222, 420, 784 |
| BciVI | GTATCC | 2 cut(s) | 652, 692 |
| BcoDI | GTCTC | 2 cut(s) | 696, 824 |
| BfmI | CTRYAG | 1 cut(s) | 834 |
| BfrI | CTTAAG | 1 cut(s) | 368 |
| BfuAI | ACCTGC | 1 cut(s) | 854 |
| BfuI | GTATCC | 2 cut(s) | 652, 692 |
| BisI | GCNGC | 5 cut(s) | 354, 444, 447, 534, 912 |
| BlsI | GCNGC | 5 cut(s) | 355, 445, 448, 535, 913 |
| Bme1390I | CCNGG | 4 cut(s) | 183, 222, 420, 784 |
| Bme18I | GGWCC | 2 cut(s) | 35, 218 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 41, 428 |
| BmeT110I | CYCGRG | 2 cut(s) | 597, 813 |
| BmgT120I | GGNCC | 2 cut(s) | 35, 218 |
| BmiI | GGNNCC | 6 cut(s) | 219, 280, 417, 463, 496, 744 |
| BmrFI | CCNGG | 4 cut(s) | 183, 222, 420, 784 |
| BmsI | GCATC | 2 cut(s) | 365, 850 |
| BpuEI | CTTGAG | 2 cut(s) | 522, 953 |
| Bsa29I | ATCGAT | 1 cut(s) | 129 |
| BsaJI | CCNNGG | 4 cut(s) | 78, 181, 490, 543 |
| BsaWI | WCCGGW | 1 cut(s) | 739 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 237, 267 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 83, 148, 805 |
| Bse118I | RCCGGY | 2 cut(s) | 230, 234 |
| Bse1I | ACTGG | 1 cut(s) | 475 |
| Bse21I | CCTNAGG | 1 cut(s) | 39 |
| Bse3DI | GCAATG | 2 cut(s) | 279, 628 |
| BseBI | CCWGG | 4 cut(s) | 183, 222, 420, 784 |
| BseCI | ATCGAT | 1 cut(s) | 129 |
| BseDI | CCNNGG | 4 cut(s) | 78, 181, 490, 543 |
| BseGI | GGATG | 2 cut(s) | 177, 356 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 83, 148, 805 |
| BseMI | GCAATG | 2 cut(s) | 279, 628 |
| BseMII | CTCAG | 2 cut(s) | 30, 398 |
| BseNI | ACTGG | 1 cut(s) | 475 |
| BseSI | GKGCMC | 1 cut(s) | 733 |
| BseX3I | CGGCCG | 1 cut(s) | 232 |
| BseXI | GCAGC | 4 cut(s) | 455, 458, 545, 923 |
| Bsh1285I | CGRYCG | 1 cut(s) | 235 |
| BshFI | GGCC | 3 cut(s) | 110, 234, 787 |
| BshNI | GGYRCC | 1 cut(s) | 494 |
| BshVI | ATCGAT | 1 cut(s) | 129 |
| BsiEI | CGRYCG | 1 cut(s) | 235 |
| BsiHKAI | GWGCWC | 1 cut(s) | 733 |
| BsiHKCI | CYCGRG | 2 cut(s) | 597, 813 |
| BsiSI | CCGG | 3 cut(s) | 231, 235, 740 |
| BslFI | GGGAC | 1 cut(s) | 231 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 83, 148, 805 |
| BsmAI | GTCTC | 2 cut(s) | 696, 824 |
| BsmFI | GGGAC | 1 cut(s) | 231 |
| BsnI | GGCC | 3 cut(s) | 110, 234, 787 |
| BsoBI | CYCGRG | 2 cut(s) | 597, 813 |
| Bsp1286I | GDGCHC | 3 cut(s) | 78, 281, 733 |
| Bsp143I | GATC | 5 cut(s) | 297, 461, 671, 736, 953 |
| BspACI | CCGC | 4 cut(s) | 142, 198, 354, 874 |
| BspANI | GGCC | 3 cut(s) | 110, 234, 787 |
| BspCNI | CTCAG | 2 cut(s) | 31, 397 |
| BspDI | ATCGAT | 1 cut(s) | 129 |
| BspLI | GGNNCC | 6 cut(s) | 219, 280, 417, 463, 496, 744 |
| BspMAI | CTGCAG | 1 cut(s) | 838 |
| BspMI | ACCTGC | 1 cut(s) | 854 |
| BspPI | GGATC | 6 cut(s) | 292, 456, 469, 679, 731, 961 |
| BspQI | GCTCTTC | 1 cut(s) | 285 |
| BspT107I | GGYRCC | 1 cut(s) | 494 |
| BspTI | CTTAAG | 1 cut(s) | 368 |
| BsrDI | GCAATG | 2 cut(s) | 279, 628 |
| BsrFI | RCCGGY | 2 cut(s) | 230, 234 |
| BsrI | ACTGG | 1 cut(s) | 475 |
| BssAI | RCCGGY | 2 cut(s) | 230, 234 |
| BssECI | CCNNGG | 4 cut(s) | 78, 181, 490, 543 |
| BssMI | GATC | 5 cut(s) | 297, 461, 671, 736, 953 |
| BssSI | CACGAG | 1 cut(s) | 693 |
| BssT1I | CCWWGG | 3 cut(s) | 78, 490, 543 |
| Bst2BI | CACGAG | 1 cut(s) | 693 |
| Bst2UI | CCWGG | 4 cut(s) | 183, 222, 420, 784 |
| Bst4CI | ACNGT | 5 cut(s) | 349, 430, 502, 514, 774 |
| Bst6I | CTCTTC | 2 cut(s) | 285, 576 |
| BstAFI | CTTAAG | 1 cut(s) | 368 |
| BstC8I | GCNNGC | 2 cut(s) | 196, 236 |
| BstDEI | CTNAG | 2 cut(s) | 39, 384 |
| BstF5I | GGATG | 2 cut(s) | 177, 356 |
| BstKTI | GATC | 5 cut(s) | 300, 464, 674, 739, 956 |
| BstMAI | GTCTC | 2 cut(s) | 696, 824 |
| BstMBI | GATC | 5 cut(s) | 297, 461, 671, 736, 953 |
| BstMCI | CGRYCG | 1 cut(s) | 235 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 269, 494, 539, 917 |
| BstNI | CCWGG | 4 cut(s) | 183, 222, 420, 784 |
| BstSCI | CCNGG | 4 cut(s) | 181, 220, 418, 782 |
| BstSFI | CTRYAG | 1 cut(s) | 834 |
| BstSLI | GKGCMC | 1 cut(s) | 733 |
| BstV1I | GCAGC | 4 cut(s) | 455, 458, 545, 923 |
| BstX2I | RGATCY | 4 cut(s) | 297, 461, 736, 953 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 29 |
| BstYI | RGATCY | 4 cut(s) | 297, 461, 736, 953 |
| BstZI | CGGCCG | 1 cut(s) | 232 |
| Bsu15I | ATCGAT | 1 cut(s) | 129 |
| Bsu36I | CCTNAGG | 1 cut(s) | 39 |
| BsuI | GTATCC | 2 cut(s) | 652, 692 |
| BsuRI | GGCC | 3 cut(s) | 110, 234, 787 |
| BsuTUI | ATCGAT | 1 cut(s) | 129 |
| BtsCI | GGATG | 2 cut(s) | 177, 356 |
| BtsIMutI | CAGTG | 4 cut(s) | 482, 498, 768, 770 |
| BveI | ACCTGC | 1 cut(s) | 854 |
| Cac8I | GCNNGC | 2 cut(s) | 196, 236 |
| CaiI | CAGNNNCTG | 1 cut(s) | 449 |
| Cfr10I | RCCGGY | 2 cut(s) | 230, 234 |
| Cfr13I | GGNCC | 2 cut(s) | 35, 218 |
| ClaI | ATCGAT | 1 cut(s) | 129 |
| CseI | GACGC | 1 cut(s) | 386 |
| Csp6I | GTAC | 3 cut(s) | 136, 426, 962 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 487, 522 |
| CviAII | CATG | 6 cut(s) | 23, 29, 376, 440, 563, 703 |
| CviQI | GTAC | 3 cut(s) | 136, 426, 962 |
| DdeI | CTNAG | 2 cut(s) | 39, 384 |
| DpnI | GATC | 5 cut(s) | 299, 463, 673, 738, 955 |
| DpnII | GATC | 5 cut(s) | 297, 461, 671, 736, 953 |
| DriI | GACNNNNNGTC | 2 cut(s) | 41, 428 |
| EaeI | YGGCCR | 1 cut(s) | 232 |
| EagI | CGGCCG | 1 cut(s) | 232 |
| Eam1104I | CTCTTC | 2 cut(s) | 285, 576 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 41, 428 |
| EarI | CTCTTC | 2 cut(s) | 285, 576 |
| EclXI | CGGCCG | 1 cut(s) | 232 |
| Eco130I | CCWWGG | 3 cut(s) | 78, 490, 543 |
| Eco147I | AGGCCT | 1 cut(s) | 787 |
| Eco24I | GRGCYC | 2 cut(s) | 78, 281 |
| Eco47I | GGWCC | 2 cut(s) | 35, 218 |
| Eco52I | CGGCCG | 1 cut(s) | 232 |
| Eco57I | CTGAAG | 1 cut(s) | 927 |
| Eco81I | CCTNAGG | 1 cut(s) | 39 |
| Eco88I | CYCGRG | 2 cut(s) | 597, 813 |
| EcoO109I | RGGNCCY | 1 cut(s) | 218 |
| EcoRII | CCWGG | 4 cut(s) | 181, 220, 418, 782 |
| EcoT14I | CCWWGG | 3 cut(s) | 78, 490, 543 |
| EcoT38I | GRGCYC | 2 cut(s) | 78, 281 |
| ErhI | CCWWGG | 3 cut(s) | 78, 490, 543 |
| FaeI | CATG | 6 cut(s) | 26, 32, 379, 443, 566, 706 |
| FaqI | GGGAC | 1 cut(s) | 231 |
| FatI | CATG | 6 cut(s) | 22, 28, 375, 439, 562, 702 |
| FauI | CCCGC | 1 cut(s) | 867 |
| Fnu4HI | GCNGC | 5 cut(s) | 354, 444, 447, 534, 912 |
| FokI | GGATG | 2 cut(s) | 164, 343 |
| FriOI | GRGCYC | 2 cut(s) | 78, 281 |
| Fsp4HI | GCNGC | 5 cut(s) | 354, 444, 447, 534, 912 |
| GluI | GCNGC | 5 cut(s) | 354, 444, 447, 534, 912 |
| HaeIII | GGCC | 3 cut(s) | 110, 234, 787 |
| HapII | CCGG | 3 cut(s) | 231, 235, 740 |
| HgaI | GACGC | 1 cut(s) | 386 |
| Hin1II | CATG | 6 cut(s) | 26, 32, 379, 443, 566, 706 |
| HinfI | GANTC | 4 cut(s) | 18, 160, 456, 644 |
| HpaII | CCGG | 3 cut(s) | 231, 235, 740 |
| HphI | GGTGA | 2 cut(s) | 551, 718 |
| Hpy166II | GTNNAC | 3 cut(s) | 35, 136, 731 |
| Hpy188I | TCNGA | 3 cut(s) | 461, 907, 928 |
| Hpy188III | TCNNGA | 4 cut(s) | 46, 778, 815, 951 |
| Hpy8I | GTNNAC | 3 cut(s) | 35, 136, 731 |
| Hpy99I | CGWCG | 1 cut(s) | 402 |
| HpyAV | CCTTC | 7 cut(s) | 174, 268, 311, 342, 523, 649, 798 |
| HpyCH4III | ACNGT | 5 cut(s) | 349, 430, 502, 514, 774 |
| HpyCH4IV | ACGT | 2 cut(s) | 424, 662 |
| HpyCH4V | TGCA | 5 cut(s) | 272, 443, 731, 836, 863 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 269, 494, 539, 917 |
| HpyF3I | CTNAG | 2 cut(s) | 39, 384 |
| HpySE526I | ACGT | 2 cut(s) | 424, 662 |
| Hsp92II | CATG | 6 cut(s) | 26, 32, 379, 443, 566, 706 |
| KroI | GCCGGC | 1 cut(s) | 234 |
| KroNI | GCCGGC | 1 cut(s) | 236 |
| Kzo9I | GATC | 5 cut(s) | 297, 461, 671, 736, 953 |
| LguI | GCTCTTC | 1 cut(s) | 285 |
| LmnI | GCTCC | 1 cut(s) | 284 |
| Lsp1109I | GCAGC | 4 cut(s) | 455, 458, 545, 923 |
| LweI | GCATC | 2 cut(s) | 365, 850 |
| MaeII | ACGT | 2 cut(s) | 424, 662 |
| MaeIII | GTNAC | 4 cut(s) | 205, 557, 601, 768 |
| MalI | GATC | 5 cut(s) | 299, 463, 673, 738, 955 |
| MboI | GATC | 5 cut(s) | 297, 461, 671, 736, 953 |
| MboII | GAAGA | 5 cut(s) | 68, 112, 302, 560, 593 |
| MflI | RGATCY | 4 cut(s) | 297, 461, 736, 953 |
| MhlI | GDGCHC | 3 cut(s) | 78, 281, 733 |
| MluCI | AATT | 3 cut(s) | 121, 168, 821 |
| MlyI | GAGTC | 3 cut(s) | 27, 154, 465 |
| MmeI | TCCRAC | 2 cut(s) | 223, 439 |
| MnlI | CCTC | 9 cut(s) | 34, 76, 82, 184, 339, 371, 577, 661, 835 |
| MroNI | GCCGGC | 1 cut(s) | 234 |
| MseI | TTAA | 2 cut(s) | 120, 369 |
| MslI | CAYNNNNRTG | 3 cut(s) | 27, 131, 679 |
| MspA1I | CMGCKG | 2 cut(s) | 212, 449 |
| MspCI | CTTAAG | 1 cut(s) | 368 |
| MspI | CCGG | 3 cut(s) | 231, 235, 740 |
| MspR9I | CCNGG | 4 cut(s) | 183, 222, 420, 784 |
| MvaI | CCWGG | 4 cut(s) | 183, 222, 420, 784 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 269, 494, 539, 917 |
| NaeI | GCCGGC | 1 cut(s) | 236 |
| NdeII | GATC | 5 cut(s) | 297, 461, 671, 736, 953 |
| NgoMIV | GCCGGC | 1 cut(s) | 234 |
| NlaIII | CATG | 6 cut(s) | 26, 32, 379, 443, 566, 706 |
| NlaIV | GGNNCC | 6 cut(s) | 219, 280, 417, 463, 496, 744 |
| NmuCI | GTSAC | 4 cut(s) | 205, 557, 601, 768 |
| PaeR7I | CTCGAG | 2 cut(s) | 597, 813 |
| PaqCI | CACCTGC | 1 cut(s) | 854 |
| PceI | AGGCCT | 1 cut(s) | 787 |
| PciSI | GCTCTTC | 1 cut(s) | 285 |
| PdiI | GCCGGC | 1 cut(s) | 236 |
| PfeI | GAWTC | 1 cut(s) | 644 |
| PkrI | GCNGC | 5 cut(s) | 355, 445, 448, 535, 913 |
| PleI | GAGTC | 3 cut(s) | 26, 154, 464 |
| PpsI | GAGTC | 3 cut(s) | 26, 154, 464 |
| PpuMI | RGGWCCY | 1 cut(s) | 218 |
| PsiI | TTATAA | 1 cut(s) | 156 |
| Psp5II | RGGWCCY | 1 cut(s) | 218 |
| Psp6I | CCWGG | 4 cut(s) | 181, 220, 418, 782 |
| PspGI | CCWGG | 4 cut(s) | 181, 220, 418, 782 |
| PspN4I | GGNNCC | 6 cut(s) | 219, 280, 417, 463, 496, 744 |
| PspPI | GGNCC | 2 cut(s) | 35, 218 |
| PspPPI | RGGWCCY | 1 cut(s) | 218 |
| PspXI | VCTCGAGB | 1 cut(s) | 597 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 861, 893 |
| PstI | CTGCAG | 1 cut(s) | 838 |
| PstNI | CAGNNNCTG | 1 cut(s) | 449 |
| PsuI | RGATCY | 4 cut(s) | 297, 461, 736, 953 |
| PvuII | CAGCTG | 2 cut(s) | 212, 449 |
| RsaI | GTAC | 3 cut(s) | 137, 427, 963 |
| RsaNI | GTAC | 3 cut(s) | 136, 426, 962 |
| RseI | CAYNNNNRTG | 3 cut(s) | 27, 131, 679 |
| SapI | GCTCTTC | 1 cut(s) | 285 |
| SaqAI | TTAA | 2 cut(s) | 120, 369 |
| SatI | GCNGC | 5 cut(s) | 354, 444, 447, 534, 912 |
| Sau3AI | GATC | 5 cut(s) | 297, 461, 671, 736, 953 |
| Sau96I | GGNCC | 2 cut(s) | 35, 218 |
| SchI | GAGTC | 3 cut(s) | 27, 154, 465 |
| ScrFI | CCNGG | 4 cut(s) | 183, 222, 420, 784 |
| SduI | GDGCHC | 3 cut(s) | 78, 281, 733 |
| SfaNI | GCATC | 2 cut(s) | 365, 850 |
| SfcI | CTRYAG | 1 cut(s) | 834 |
| Sfr274I | CTCGAG | 2 cut(s) | 597, 813 |
| SinI | GGWCC | 2 cut(s) | 35, 218 |
| SlaI | CTCGAG | 2 cut(s) | 597, 813 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 27, 131, 679 |
| SmlI | CTYRAG | 5 cut(s) | 368, 537, 597, 813, 932 |
| SmoI | CTYRAG | 5 cut(s) | 368, 537, 597, 813, 932 |
| Sse9I | AATT | 3 cut(s) | 121, 168, 821 |
| SseBI | AGGCCT | 1 cut(s) | 787 |
| SsiI | CCGC | 4 cut(s) | 142, 198, 354, 874 |
| StuI | AGGCCT | 1 cut(s) | 787 |
| StyD4I | CCNGG | 4 cut(s) | 181, 220, 418, 782 |
| StyI | CCWWGG | 3 cut(s) | 78, 490, 543 |
| TaaI | ACNGT | 5 cut(s) | 349, 430, 502, 514, 774 |
| TaiI | ACGT | 2 cut(s) | 427, 665 |
| TaqI | TCGA | 5 cut(s) | 129, 189, 598, 814, 880 |
| TasI | AATT | 3 cut(s) | 121, 168, 821 |
| TatI | WGTACW | 2 cut(s) | 135, 961 |
| TauI | GCSGC | 1 cut(s) | 356 |
| TfiI | GAWTC | 1 cut(s) | 644 |
| Tru1I | TTAA | 2 cut(s) | 120, 369 |
| Tru9I | TTAA | 2 cut(s) | 120, 369 |
| TscAI | CASTG | 4 cut(s) | 482, 505, 768, 777 |
| TseFI | GTSAC | 4 cut(s) | 205, 557, 601, 768 |
| TseI | GCWGC | 4 cut(s) | 443, 446, 533, 911 |
| Tsp45I | GTSAC | 4 cut(s) | 205, 557, 601, 768 |
| TspDTI | ATGAA | 4 cut(s) | 39, 115, 428, 834 |
| TspRI | CASTG | 4 cut(s) | 482, 505, 768, 777 |
| Vha464I | CTTAAG | 1 cut(s) | 368 |
| VneI | GTGCAC | 1 cut(s) | 729 |
| VpaK11BI | GGWCC | 2 cut(s) | 35, 218 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 29 |
| XhoI | CTCGAG | 2 cut(s) | 597, 813 |