pycom01g19080

quinone oxidoreductase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
17890857 .. 17893719
2863 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g19080.6

Sequence Viewer

Length: 1179 bp
ATGGCCACCCACGTGTCCATCCTCAAGGGACATTCCCTCCAAAATGATTGGGCCTGCCATTCTTTTGGGCTGAAACAAAACCCTGCAGGTGGCCTTTCTTCATCTGGCCGCTATCTCAGACTGGATACAATTCCGATGACCCAGAGATCATCAGTAGCAGTTAGATCAGTTGCCACTGAAGCAGCAGCATCACCACCAGCAGCAAAGATGGTCAAAGCCATTCGAATCCACGAACATGGTGGCCCTGAGGTGTTGAAATGGGAAGATGTGGAAGTAGGGGAGCCAAAGGAGGGCGAGATTCGTGTGAAGAATGAGGCCATCGGGATTAATTTCATTGATGTGTACTACCGCAAAGGCCTTTATAAGGCTGCTACGCTTCCCTACACCCCAGGTGTCGAGGCTTGTGGAGTCGTGACAGCTGTGGGACCAGGTCTAACGGGCAGGCAAGTTGGAGATCTTGTAGCCTATGCTGGTCAGCAAATGGGCTCATATGCGGAAGAGCAGATCCTTCCTGCAAACAGAGCTGTGCCTGTTCCTCCTACCATCGATCCTAAAGTTGCAGCCTCCCTCATGCTTAAGGGTACGACAGCTCAGTTTCTACGCCGCTGTTTCAAGGTCGAACCTGGACACGCAGTCCTTGTTCATGCAGCAGCTGGTGGAGTTGGATCCCTTTTATGCCAGTGGGCTAATGCCCTTGGTGCGACTGTCATTGGGACTGTATCAACTAAGGAAAAGGCAGCTCAGGCCAAGGAGGATGGATGCCACCACGTCATAATATATAAGGAAGAGGACTTTGTCACTCGTGTGAAAGAAATAACATCCAACAATGGGGTTGAAGTTGTCTACGATTCTGTTGGGAAGGATACGTTTGAGGGATCACTGGAAGTCTTAAAACTTCGGGGATACATGGTGAGTTTTGGGCAGTCATCAGGTGCGCCTGATCCAGTTCCATTATCAGCTATTGCAGCGAAATCACTCTTCTTGACTCGGCCTAGCCTCTTTCATTACGCTTTAACTCGAGAGGAATTGTTAGAGGCTGCAGGAGAGGTATTTGCTAATGTTGCATCGGGTATATTGCGGGTTCGAGTGAATCACACCTACTCATTATCTGAAGCAGCGCAGGCACACGCAGACCTTGAGAACAGGAAAACATCTGGATCTATCGTTCTTGTCCCCTAG

Protein Analysis

393

Amino Acids

41.74

Weight (kDa)

7.2

Isoelectric Point (pI)

37.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 363
AarI CACCTGC 1 cut(s) 77
Acc36I ACCTGC 1 cut(s) 77
AccI GTMKAC 1 cut(s) 843
AciI CCGC 5 cut(s) 109, 349, 494, 604, 1078
AclWI GGATC 7 cut(s) 499, 542, 660, 673, 883, 935, 1165
AcoI YGGCCR 2 cut(s) 3, 106
AcuI CTGAAG 2 cut(s) 198, 1131
AcvI CACGTG 1 cut(s) 13
AfaI GTAC 2 cut(s) 344, 583
AfiI CCNNNNNNNGG 4 cut(s) 89, 290, 364, 828
AflII CTTAAG 1 cut(s) 575
AflIII ACRYGT 1 cut(s) 12
AgsI TTSAA 3 cut(s) 256, 613, 836
AhdI GACNNNNNGTC 1 cut(s) 632
AjiI CACGTC 1 cut(s) 769
AjnI CCWGG 3 cut(s) 388, 427, 622
AleI CACNNNNGTG 2 cut(s) 11, 803
AloI GAACNNNNNNTCC 1 cut(s) 1149
AluBI AGCT 6 cut(s) 419, 524, 590, 653, 740, 959
AluI AGCT 6 cut(s) 419, 524, 590, 653, 740, 959
AlwI GGATC 7 cut(s) 499, 542, 660, 673, 883, 935, 1165
AlwNI CAGNNNCTG 1 cut(s) 653
Ama87I CYCGRG 1 cut(s) 1017
AoxI GGCC 9 cut(s) 3, 51, 91, 106, 241, 315, 355, 744, 989
AseI ATTAAT 1 cut(s) 327
AspLEI GCGC 2 cut(s) 937, 1120
AspS9I GGNCC 3 cut(s) 51, 242, 425
AsuHPI GGTGA 2 cut(s) 183, 922
AsuII TTCGAA 1 cut(s) 223
AvaI CYCGRG 1 cut(s) 1017
AvaII GGWCC 1 cut(s) 425
AxyI CCTNAGG 1 cut(s) 246
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 665
BanII GRGCYC 1 cut(s) 488
BauI CACGAG 1 cut(s) 801
BbrPI CACGTG 1 cut(s) 13
BccI CCATC 5 cut(s) 26, 202, 326, 551, 749
BciT130I CCWGG 3 cut(s) 390, 429, 624
BciVI GTATCC 3 cut(s) 118, 856, 896
BfaI CTAG 2 cut(s) 993, 1177
BfmI CTRYAG 2 cut(s) 84, 1038
BfrI CTTAAG 1 cut(s) 575
BfuAI ACCTGC 1 cut(s) 77
BfuI GTATCC 3 cut(s) 118, 856, 896
BglII AGATCT 1 cut(s) 454
Bme1390I CCNGG 3 cut(s) 390, 429, 624
Bme18I GGWCC 1 cut(s) 425
BmeRI GACNNNNNGTC 1 cut(s) 632
BmeT110I CYCGRG 1 cut(s) 1017
BmgBI CACGTC 1 cut(s) 769
BmgT120I GGNCC 3 cut(s) 51, 242, 425
BmiI GGNNCC 3 cut(s) 282, 426, 667
BmrFI CCNGG 3 cut(s) 390, 429, 624
BmsI GCATC 3 cut(s) 197, 749, 1073
Bpu10I CCTNAGC 1 cut(s) 741
Bpu14I TTCGAA 1 cut(s) 223
BpuEI CTTGAG 2 cut(s) 8, 1157
Bsa29I ATCGAT 1 cut(s) 546
BsaAI YACGTR 1 cut(s) 13
BsaJI CCNNGG 3 cut(s) 388, 694, 747
BsaXI ACNNNNNCTCC 4 cut(s) 21, 51, 444, 474
Bsc4I CCNNNNNNNGG 4 cut(s) 89, 290, 364, 828
Bse1I ACTGG 4 cut(s) 126, 679, 885, 944
Bse21I CCTNAGG 1 cut(s) 246
BseBI CCWGG 3 cut(s) 390, 429, 624
BseCI ATCGAT 1 cut(s) 546
BseDI CCNNGG 3 cut(s) 388, 694, 747
BseGI GGATG 4 cut(s) 18, 760, 764, 818
BseLI CCNNNNNNNGG 4 cut(s) 89, 290, 364, 828
BseMII CTCAG 4 cut(s) 130, 237, 605, 755
BseNI ACTGG 4 cut(s) 126, 679, 885, 944
BshFI GGCC 9 cut(s) 5, 53, 93, 108, 243, 317, 357, 746, 991
BshVI ATCGAT 1 cut(s) 546
BsiHKCI CYCGRG 1 cut(s) 1017
BslFI GGGAC 4 cut(s) 42, 438, 727, 1157
BslI CCNNNNNNNGG 4 cut(s) 89, 290, 364, 828
BsmFI GGGAC 4 cut(s) 42, 438, 727, 1157
BsnI GGCC 9 cut(s) 5, 53, 93, 108, 243, 317, 357, 746, 991
BsoBI CYCGRG 1 cut(s) 1017
Bsp119I TTCGAA 1 cut(s) 223
Bsp1286I GDGCHC 1 cut(s) 488
Bsp143I GATC 9 cut(s) 146, 164, 454, 504, 547, 665, 875, 940, 1157
BspACI CCGC 5 cut(s) 109, 349, 494, 604, 1078
BspANI GGCC 9 cut(s) 5, 53, 93, 108, 243, 317, 357, 746, 991
BspCNI CTCAG 4 cut(s) 129, 238, 604, 754
BspDI ATCGAT 1 cut(s) 546
BspLI GGNNCC 3 cut(s) 282, 426, 667
BspMAI CTGCAG 2 cut(s) 88, 1042
BspMI ACCTGC 1 cut(s) 77
BspPI GGATC 7 cut(s) 499, 542, 660, 673, 883, 935, 1165
BspQI GCTCTTC 1 cut(s) 492
BspT104I TTCGAA 1 cut(s) 223
BspTI CTTAAG 1 cut(s) 575
BsrI ACTGG 4 cut(s) 126, 679, 885, 944
BssECI CCNNGG 3 cut(s) 388, 694, 747
BssMI GATC 9 cut(s) 146, 164, 454, 504, 547, 665, 875, 940, 1157
BssSI CACGAG 1 cut(s) 801
BssT1I CCWWGG 2 cut(s) 694, 747
Bst2BI CACGAG 1 cut(s) 801
Bst2UI CCWGG 3 cut(s) 390, 429, 624
Bst4CI ACNGT 2 cut(s) 706, 718
Bst6I CTCTTC 3 cut(s) 492, 780, 983
BstAFI CTTAAG 1 cut(s) 575
BstBAI YACGTR 1 cut(s) 13
BstBI TTCGAA 1 cut(s) 223
BstC8I GCNNGC 3 cut(s) 55, 443, 1122
BstDEI CTNAG 5 cut(s) 116, 246, 591, 726, 741
BstENI CCTNNNNNAGG 1 cut(s) 362
BstF5I GGATG 4 cut(s) 18, 760, 764, 818
BstHHI GCGC 2 cut(s) 937, 1120
BstKTI GATC 9 cut(s) 149, 167, 457, 507, 550, 668, 878, 943, 1160
BstMBI GATC 9 cut(s) 146, 164, 454, 504, 547, 665, 875, 940, 1157
BstMWI GCNNNNNNNGC 7 cut(s) 179, 521, 698, 743, 965, 1061, 1121
BstNI CCWGG 3 cut(s) 390, 429, 624
BstSCI CCNGG 3 cut(s) 388, 427, 622
BstSFI CTRYAG 2 cut(s) 84, 1038
BstX2I RGATCY 4 cut(s) 454, 504, 665, 1157
BstXI CCANNNNNNTGG 2 cut(s) 65, 236
BstYI RGATCY 4 cut(s) 454, 504, 665, 1157
Bsu15I ATCGAT 1 cut(s) 546
Bsu36I CCTNAGG 1 cut(s) 246
BsuI GTATCC 3 cut(s) 118, 856, 896
BsuRI GGCC 9 cut(s) 5, 53, 93, 108, 243, 317, 357, 746, 991
BsuTUI ATCGAT 1 cut(s) 546
BtrI CACGTC 1 cut(s) 769
BtsCI GGATG 4 cut(s) 18, 760, 764, 818
BtsIMutI CAGTG 3 cut(s) 174, 686, 878
BveI ACCTGC 1 cut(s) 77
Cac8I GCNNGC 3 cut(s) 55, 443, 1122
CaiI CAGNNNCTG 1 cut(s) 653
CfoI GCGC 2 cut(s) 937, 1120
Cfr13I GGNCC 3 cut(s) 51, 242, 425
ClaI ATCGAT 1 cut(s) 546
CsiI ACCWGGT 1 cut(s) 427
Csp6I GTAC 2 cut(s) 343, 582
CviAII CATG 4 cut(s) 236, 571, 644, 907
CviQI GTAC 2 cut(s) 343, 582
DdeI CTNAG 5 cut(s) 116, 246, 591, 726, 741
DpnI GATC 9 cut(s) 148, 166, 456, 506, 549, 667, 877, 942, 1159
DpnII GATC 9 cut(s) 146, 164, 454, 504, 547, 665, 875, 940, 1157
DriI GACNNNNNGTC 1 cut(s) 632
EaeI YGGCCR 2 cut(s) 3, 106
Eam1104I CTCTTC 3 cut(s) 492, 780, 983
Eam1105I GACNNNNNGTC 1 cut(s) 632
EarI CTCTTC 3 cut(s) 492, 780, 983
Eco130I CCWWGG 2 cut(s) 694, 747
Eco147I AGGCCT 1 cut(s) 357
Eco24I GRGCYC 1 cut(s) 488
Eco47I GGWCC 1 cut(s) 425
Eco57I CTGAAG 2 cut(s) 198, 1131
Eco72I CACGTG 1 cut(s) 13
Eco81I CCTNAGG 1 cut(s) 246
Eco88I CYCGRG 1 cut(s) 1017
EcoNI CCTNNNNNAGG 1 cut(s) 362
EcoRII CCWGG 3 cut(s) 388, 427, 622
EcoT14I CCWWGG 2 cut(s) 694, 747
EcoT38I GRGCYC 1 cut(s) 488
ErhI CCWWGG 2 cut(s) 694, 747
FaeI CATG 4 cut(s) 239, 574, 647, 910
FaqI GGGAC 4 cut(s) 42, 438, 727, 1157
FatI CATG 4 cut(s) 235, 570, 643, 906
FauI CCCGC 1 cut(s) 1071
FauNDI CATATG 1 cut(s) 490
FblI GTMKAC 1 cut(s) 843
FokI GGATG 4 cut(s) 5, 767, 771, 805
FriOI GRGCYC 1 cut(s) 488
FspBI CTAG 2 cut(s) 993, 1177
GlaI GCGC 2 cut(s) 936, 1119
HaeIII GGCC 9 cut(s) 5, 53, 93, 108, 243, 317, 357, 746, 991
HhaI GCGC 2 cut(s) 937, 1120
Hin1II CATG 4 cut(s) 239, 574, 647, 910
Hin6I GCGC 2 cut(s) 935, 1118
HinP1I GCGC 2 cut(s) 935, 1118
HinfI GANTC 6 cut(s) 225, 298, 408, 848, 985, 1090
HphI GGTGA 2 cut(s) 183, 922
Hpy166II GTNNAC 2 cut(s) 343, 844
Hpy188I TCNGA 3 cut(s) 119, 135, 1111
Hpy188III TCNNGA 5 cut(s) 322, 412, 982, 1019, 1155
Hpy8I GTNNAC 2 cut(s) 343, 844
HpyAV CCTTC 2 cut(s) 518, 853
HpyCH4III ACNGT 2 cut(s) 706, 718
HpyCH4IV ACGT 3 cut(s) 12, 768, 866
HpyCH4V TGCA 7 cut(s) 86, 515, 560, 647, 965, 1040, 1064
HpyF10VI GCNNNNNNNGC 7 cut(s) 179, 521, 698, 743, 965, 1061, 1121
HpyF3I CTNAG 5 cut(s) 116, 246, 591, 726, 741
HpySE526I ACGT 3 cut(s) 12, 768, 866
Hsp92II CATG 4 cut(s) 239, 574, 647, 910
HspAI GCGC 2 cut(s) 935, 1118
Kzo9I GATC 9 cut(s) 146, 164, 454, 504, 547, 665, 875, 940, 1157
LguI GCTCTTC 1 cut(s) 492
LmnI GCTCC 1 cut(s) 280
LweI GCATC 3 cut(s) 197, 749, 1073
MabI ACCWGGT 1 cut(s) 427
MaeI CTAG 2 cut(s) 993, 1177
MaeII ACGT 3 cut(s) 12, 768, 866
MaeIII GTNAC 2 cut(s) 412, 796
MalI GATC 9 cut(s) 148, 166, 456, 506, 549, 667, 877, 942, 1159
MboI GATC 9 cut(s) 146, 164, 454, 504, 547, 665, 875, 940, 1157
MboII GAAGA 6 cut(s) 90, 275, 319, 509, 797, 970
MflI RGATCY 4 cut(s) 454, 504, 665, 1157
MhlI GDGCHC 1 cut(s) 488
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 3 cut(s) 129, 328, 1025
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 417, 979
MmeI TCCRAC 3 cut(s) 430, 643, 846
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 327, 576, 890, 1013
MslI CAYNNNNRTG 4 cut(s) 11, 234, 338, 803
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 3 cut(s) 419, 606, 653
MspCI CTTAAG 1 cut(s) 575
MspR9I CCNGG 3 cut(s) 390, 429, 624
MvaI CCWGG 3 cut(s) 390, 429, 624
MwoI GCNNNNNNNGC 7 cut(s) 179, 521, 698, 743, 965, 1061, 1121
NdeI CATATG 1 cut(s) 490
NdeII GATC 9 cut(s) 146, 164, 454, 504, 547, 665, 875, 940, 1157
NlaIII CATG 4 cut(s) 239, 574, 647, 910
NlaIV GGNNCC 3 cut(s) 282, 426, 667
NmeAIII GCCGAG 1 cut(s) 967
NmuCI GTSAC 2 cut(s) 412, 796
NspV TTCGAA 1 cut(s) 223
OliI CACNNNNGTG 2 cut(s) 11, 803
PaeR7I CTCGAG 1 cut(s) 1017
PaqCI CACCTGC 1 cut(s) 77
PceI AGGCCT 1 cut(s) 357
PciSI GCTCTTC 1 cut(s) 492
PfeI GAWTC 4 cut(s) 225, 298, 848, 1090
PflFI GACNNNGTC 2 cut(s) 429, 794
PleI GAGTC 2 cut(s) 416, 979
PmaCI CACGTG 1 cut(s) 13
PmlI CACGTG 1 cut(s) 13
PpsI GAGTC 2 cut(s) 416, 979
Ppu21I YACGTR 1 cut(s) 13
PshBI ATTAAT 1 cut(s) 327
PsiI TTATAA 1 cut(s) 363
Psp6I CCWGG 3 cut(s) 388, 427, 622
PspCI CACGTG 1 cut(s) 13
PspGI CCWGG 3 cut(s) 388, 427, 622
PspN4I GGNNCC 3 cut(s) 282, 426, 667
PspPI GGNCC 3 cut(s) 51, 242, 425
PstI CTGCAG 2 cut(s) 88, 1042
PstNI CAGNNNCTG 1 cut(s) 653
PsuI RGATCY 4 cut(s) 454, 504, 665, 1157
PsyI GACNNNGTC 2 cut(s) 429, 794
PvuII CAGCTG 2 cut(s) 419, 653
RsaI GTAC 2 cut(s) 344, 583
RsaNI GTAC 2 cut(s) 343, 582
RseI CAYNNNNRTG 4 cut(s) 11, 234, 338, 803
SapI GCTCTTC 1 cut(s) 492
SaqAI TTAA 4 cut(s) 327, 576, 890, 1013
Sau3AI GATC 9 cut(s) 146, 164, 454, 504, 547, 665, 875, 940, 1157
Sau96I GGNCC 3 cut(s) 51, 242, 425
SbfI CCTGCAGG 1 cut(s) 88
SchI GAGTC 2 cut(s) 417, 979
ScrFI CCNGG 3 cut(s) 390, 429, 624
SdaI CCTGCAGG 1 cut(s) 88
SduI GDGCHC 1 cut(s) 488
SexAI ACCWGGT 1 cut(s) 427
SfaNI GCATC 3 cut(s) 197, 749, 1073
SfcI CTRYAG 2 cut(s) 84, 1038
Sfr274I CTCGAG 1 cut(s) 1017
SfuI TTCGAA 1 cut(s) 223
SinI GGWCC 1 cut(s) 425
SlaI CTCGAG 1 cut(s) 1017
SmiMI CAYNNNNRTG 4 cut(s) 11, 234, 338, 803
SmlI CTYRAG 4 cut(s) 23, 575, 1017, 1136
SmoI CTYRAG 4 cut(s) 23, 575, 1017, 1136
Sse8387I CCTGCAGG 1 cut(s) 88
Sse9I AATT 3 cut(s) 129, 328, 1025
SseBI AGGCCT 1 cut(s) 357
SsiI CCGC 5 cut(s) 109, 349, 494, 604, 1078
SspMI CTAG 2 cut(s) 993, 1177
StuI AGGCCT 1 cut(s) 357
StyD4I CCNGG 3 cut(s) 388, 427, 622
StyI CCWWGG 2 cut(s) 694, 747
TaaI ACNGT 2 cut(s) 706, 718
TaiI ACGT 3 cut(s) 15, 771, 869
TaqI TCGA 6 cut(s) 223, 396, 546, 618, 1018, 1084
TasI AATT 3 cut(s) 129, 328, 1025
TatI WGTACW 1 cut(s) 342
TauI GCSGC 2 cut(s) 111, 606
TfiI GAWTC 4 cut(s) 225, 298, 848, 1090
Tru1I TTAA 4 cut(s) 327, 576, 890, 1013
Tru9I TTAA 4 cut(s) 327, 576, 890, 1013
TscAI CASTG 3 cut(s) 181, 686, 885
TseFI GTSAC 2 cut(s) 412, 796
Tsp45I GTSAC 2 cut(s) 412, 796
TspDTI ATGAA 4 cut(s) 90, 322, 632, 992
TspRI CASTG 3 cut(s) 181, 686, 885
Tth111I GACNNNGTC 2 cut(s) 429, 794
Vha464I CTTAAG 1 cut(s) 575
VpaK11BI GGWCC 1 cut(s) 425
VspI ATTAAT 1 cut(s) 327
XagI CCTNNNNNAGG 1 cut(s) 362
XcmI CCANNNNNNNNNTGG 1 cut(s) 236
XhoI CTCGAG 1 cut(s) 1017
XmiI GTMKAC 1 cut(s) 843
XspI CTAG 2 cut(s) 993, 1177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.