Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51200 AT5G51200 AT5G51200 |
| fragaria_vesca | FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 |
| malus_domestica | MD02G1032900.v1.1 |
| prunus_persica | Prupe.7G242500_v2.0.a1 |
| pyrus_communis | pycom02g02700 |
| rosa_chinensis | RchiOBHm_Chr2g0088511 RchiOBHm_Chr5g0006961 RchiOBHm_Chr5g0007071 RchiOBHm_Chr5g0007211 RchiOBHm_Chr5g0007281 RchiOBHm_Chr5g0007291 RchiOBHm_Chr5g0007331 |
| rosa_laevigata | RLG00000015961 RLG00000031440 RLG00000031448 RLG00000031451 |
| rosa_multiflora | Rmu_sc0002566.1_g000004 Rmu_sc0004733.1_g000009 Rmu_sc0026502.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00152620 |
| rosa_rugosa | Rorug01G0484700 Rorug01G0484800 Rorug01G0484900 Rorug04G0425700 |
| rosa_samantha | Rh2AG039700 Rh2BG038600 Rh2CG039800 Rh2DG039100 Rh5AG053000 Rh5AG053400 Rh5AG054100 Rh5AG054500 Rh5CG060600 Rh5CG061000 |
| rosa_wichuraiana | Rw2G003100 Rw5G005170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 521, 720, 2985 |
| AarI | CACCTGC | 1 cut(s) | 1187 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 224 |
| AatII | GACGTC | 1 cut(s) | 228 |
| Acc16I | TGCGCA | 1 cut(s) | 3234 |
| Acc36I | ACCTGC | 2 cut(s) | 1187, 5071 |
| Acc65I | GGTACC | 1 cut(s) | 938 |
| AccB1I | GGYRCC | 4 cut(s) | 938, 1625, 1799, 5489 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2515 |
| AccBSI | CCGCTC | 1 cut(s) | 395 |
| AccI | GTMKAC | 1 cut(s) | 4852 |
| AccII | CGCG | 1 cut(s) | 3123 |
| AccIII | TCCGGA | 1 cut(s) | 2340 |
| AciI | CCGC | 7 cut(s) | 50, 137, 200, 393, 679, 3971, 5529 |
| AclI | AACGTT | 2 cut(s) | 1074, 3669 |
| AcoI | YGGCCR | 2 cut(s) | 2804, 4868 |
| AcuI | CTGAAG | 4 cut(s) | 1514, 2061, 2162, 5011 |
| AcyI | GRCGYC | 3 cut(s) | 5, 225, 2497 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 633, 859, 2464, 2515, 3305, 4366, 5434 |
| AflIII | ACRYGT | 4 cut(s) | 705, 3008, 3121, 5404 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 5081 |
| AhlI | ACTAGT | 2 cut(s) | 2750, 5395 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2144, 2176, 3165, 3197 |
| Alw44I | GTGCAC | 1 cut(s) | 1920 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 836, 2515 |
| Ama87I | CYCGRG | 3 cut(s) | 627, 4431, 5558 |
| Aor13HI | TCCGGA | 1 cut(s) | 2340 |
| ApaLI | GTGCAC | 1 cut(s) | 1920 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1940, 1972, 5125, 5157 |
| AseI | ATTAAT | 1 cut(s) | 3518 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1076, 3369, 5417 |
| Asp718I | GGTACC | 1 cut(s) | 938 |
| AspLEI | GCGC | 4 cut(s) | 199, 348, 2070, 3235 |
| AspS9I | GGNCC | 7 cut(s) | 47, 154, 560, 1435, 3115, 4351, 5501 |
| AsuC2I | CCSGG | 3 cut(s) | 628, 629, 3386 |
| AsuII | TTCGAA | 2 cut(s) | 97, 3258 |
| AvaI | CYCGRG | 3 cut(s) | 627, 4431, 5558 |
| AvaII | GGWCC | 2 cut(s) | 154, 1435 |
| BaeGI | GKGCMC | 1 cut(s) | 1924 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 3063, 3096, 3761, 3794 |
| BalI | TGGCCA | 1 cut(s) | 4870 |
| BamHI | GGATCC | 1 cut(s) | 2998 |
| BanI | GGYRCC | 4 cut(s) | 938, 1625, 1799, 5489 |
| BanII | GRGCYC | 7 cut(s) | 84, 163, 363, 1965, 3328, 4453, 4519 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1285, 1317, 1474, 1506 |
| BauI | CACGAG | 2 cut(s) | 797, 4200 |
| BbsI | GAAGAC | 5 cut(s) | 776, 2168, 3285, 5003, 5410 |
| BbvCI | CCTCAGC | 2 cut(s) | 5033, 5193 |
| BceAI | ACGGC | 2 cut(s) | 4061, 5099 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 77, 111 |
| BciVI | GTATCC | 2 cut(s) | 2366, 3382 |
| BclI | TGATCA | 5 cut(s) | 427, 1173, 2101, 3271, 4780 |
| BcnI | CCSGG | 3 cut(s) | 628, 629, 3386 |
| BcuI | ACTAGT | 2 cut(s) | 2750, 5395 |
| BfmI | CTRYAG | 2 cut(s) | 1040, 5078 |
| BfuAI | ACCTGC | 2 cut(s) | 1187, 5071 |
| BfuI | GTATCC | 2 cut(s) | 2366, 3382 |
| BglII | AGATCT | 6 cut(s) | 382, 2916, 3523, 3726, 4156, 4379 |
| BlpI | GCTNAGC | 1 cut(s) | 4467 |
| BmcAI | AGTACT | 1 cut(s) | 730 |
| Bme18I | GGWCC | 2 cut(s) | 154, 1435 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 5081 |
| BmeT110I | CYCGRG | 3 cut(s) | 627, 4431, 5558 |
| BmgT120I | GGNCC | 7 cut(s) | 47, 154, 560, 1435, 3115, 4351, 5501 |
| BmiI | GGNNCC | 6 cut(s) | 940, 1377, 1627, 1801, 3000, 5491 |
| BpiI | GAAGAC | 5 cut(s) | 776, 2168, 3285, 5003, 5410 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 66, 98, 4948, 4980, 4994, 5026 |
| Bpu10I | CCTNAGC | 5 cut(s) | 4064, 4518, 5033, 5193, 5423 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 4467 |
| Bpu14I | TTCGAA | 2 cut(s) | 97, 3258 |
| BpuEI | CTTGAG | 8 cut(s) | 147, 1892, 2074, 2517, 2933, 3285, 3601, 5609 |
| BpuMI | CCSGG | 3 cut(s) | 628, 629, 3386 |
| Bsa29I | ATCGAT | 1 cut(s) | 3514 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2453, 2541, 4161 |
| BsaHI | GRCGYC | 3 cut(s) | 5, 225, 2497 |
| BsaI | GGTCTC | 1 cut(s) | 5089 |
| BsaJI | CCNNGG | 8 cut(s) | 553, 627, 858, 1485, 1929, 3021, 3384, 4348 |
| BsaWI | WCCGGW | 2 cut(s) | 992, 2340 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1626, 1656, 4506, 4536 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 633, 859, 2464, 2515, 3305, 4366, 5434 |
| Bse1I | ACTGG | 3 cut(s) | 118, 1081, 2448 |
| Bse3DI | GCAATG | 3 cut(s) | 649, 1402, 4323 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2453, 2541, 4161 |
| BseAI | TCCGGA | 1 cut(s) | 2340 |
| BseCI | ATCGAT | 1 cut(s) | 3514 |
| BseDI | CCNNGG | 8 cut(s) | 553, 627, 858, 1485, 1929, 3021, 3384, 4348 |
| BseJI | GATNNNNATC | 3 cut(s) | 2453, 2541, 4161 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 633, 859, 2464, 2515, 3305, 4366, 5434 |
| BseMI | GCAATG | 3 cut(s) | 649, 1402, 4323 |
| BseNI | ACTGG | 3 cut(s) | 118, 1081, 2448 |
| BseRI | GAGGAG | 4 cut(s) | 8, 116, 3288, 3689 |
| BseSI | GKGCMC | 1 cut(s) | 1924 |
| BseYI | CCCAGC | 1 cut(s) | 5503 |
| BsgI | GTGCAG | 3 cut(s) | 849, 1131, 1920 |
| Bsh1236I | CGCG | 1 cut(s) | 3123 |
| BshNI | GGYRCC | 4 cut(s) | 938, 1625, 1799, 5489 |
| BshVI | ATCGAT | 1 cut(s) | 3514 |
| BsiHKCI | CYCGRG | 3 cut(s) | 627, 4431, 5558 |
| BsiSI | CCGG | 6 cut(s) | 628, 906, 993, 2341, 3386, 5499 |
| BslFI | GGGAC | 3 cut(s) | 841, 1594, 4776 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 633, 859, 2464, 2515, 3305, 4366, 5434 |
| BsmBI | CGTCTC | 2 cut(s) | 298, 4036 |
| BsmFI | GGGAC | 3 cut(s) | 841, 1594, 4776 |
| BsmI | GAATGC | 3 cut(s) | 199, 2863, 4426 |
| Bso31I | GGTCTC | 1 cut(s) | 5089 |
| BsoBI | CYCGRG | 3 cut(s) | 627, 4431, 5558 |
| Bsp119I | TTCGAA | 2 cut(s) | 97, 3258 |
| Bsp13I | TCCGGA | 1 cut(s) | 2340 |
| Bsp1407I | TGTACA | 2 cut(s) | 961, 1149 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 4467 |
| Bsp19I | CCATGG | 2 cut(s) | 1929, 3021 |
| BspACI | CCGC | 7 cut(s) | 50, 137, 200, 393, 679, 3971, 5529 |
| BspDI | ATCGAT | 1 cut(s) | 3514 |
| BspEI | TCCGGA | 1 cut(s) | 2340 |
| BspFNI | CGCG | 1 cut(s) | 3123 |
| BspHI | TCATGA | 5 cut(s) | 886, 2319, 2616, 2959, 4333 |
| BspLI | GGNNCC | 6 cut(s) | 940, 1377, 1627, 1801, 3000, 5491 |
| BspMAI | CTGCAG | 1 cut(s) | 5082 |
| BspMI | ACCTGC | 2 cut(s) | 1187, 5071 |
| BspT104I | TTCGAA | 2 cut(s) | 97, 3258 |
| BspT107I | GGYRCC | 4 cut(s) | 938, 1625, 1799, 5489 |
| BspTNI | GGTCTC | 1 cut(s) | 5089 |
| BsrBI | CCGCTC | 1 cut(s) | 395 |
| BsrDI | GCAATG | 3 cut(s) | 649, 1402, 4323 |
| BsrGI | TGTACA | 2 cut(s) | 961, 1149 |
| BsrI | ACTGG | 3 cut(s) | 118, 1081, 2448 |
| BssECI | CCNNGG | 8 cut(s) | 553, 627, 858, 1485, 1929, 3021, 3384, 4348 |
| BssNAI | GTATAC | 1 cut(s) | 4853 |
| BssNI | GRCGYC | 3 cut(s) | 5, 225, 2497 |
| BssSI | CACGAG | 2 cut(s) | 797, 4200 |
| BssT1I | CCWWGG | 4 cut(s) | 553, 1485, 1929, 3021 |
| Bst1107I | GTATAC | 1 cut(s) | 4853 |
| Bst2BI | CACGAG | 2 cut(s) | 797, 4200 |
| Bst6I | CTCTTC | 6 cut(s) | 319, 373, 1910, 2214, 3335, 4872 |
| BstACI | GRCGYC | 3 cut(s) | 5, 225, 2497 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2869 |
| BstAUI | TGTACA | 2 cut(s) | 961, 1149 |
| BstBI | TTCGAA | 2 cut(s) | 97, 3258 |
| BstDSI | CCRYGG | 2 cut(s) | 1929, 3021 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 857 |
| BstFNI | CGCG | 1 cut(s) | 3123 |
| BstHHI | GCGC | 4 cut(s) | 199, 348, 2070, 3235 |
| BstSFI | CTRYAG | 2 cut(s) | 1040, 5078 |
| BstSLI | GKGCMC | 1 cut(s) | 1924 |
| BstUI | CGCG | 1 cut(s) | 3123 |
| BstV2I | GAAGAC | 5 cut(s) | 776, 2168, 3285, 5003, 5410 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 4502 |
| BstZ17I | GTATAC | 1 cut(s) | 4853 |
| Bsu15I | ATCGAT | 1 cut(s) | 3514 |
| BsuI | GTATCC | 2 cut(s) | 2366, 3382 |
| BsuTUI | ATCGAT | 1 cut(s) | 3514 |
| BtgI | CCRYGG | 2 cut(s) | 1929, 3021 |
| BtgZI | GCGATG | 2 cut(s) | 4606, 5348 |
| BtsI | GCAGTG | 3 cut(s) | 2606, 3601, 4055 |
| BtsIMutI | CAGTG | 7 cut(s) | 369, 2221, 2441, 2606, 3601, 3860, 4055 |
| BveI | ACCTGC | 2 cut(s) | 1187, 5071 |
| CaiI | CAGNNNCTG | 2 cut(s) | 836, 2515 |
| CciI | TCATGA | 5 cut(s) | 886, 2319, 2616, 2959, 4333 |
| CfoI | GCGC | 4 cut(s) | 199, 348, 2070, 3235 |
| Cfr13I | GGNCC | 7 cut(s) | 47, 154, 560, 1435, 3115, 4351, 5501 |
| Cfr9I | CCCGGG | 1 cut(s) | 627 |
| ClaI | ATCGAT | 1 cut(s) | 3514 |
| CpoI | CGGWCCG | 1 cut(s) | 154 |
| CseI | GACGC | 5 cut(s) | 13, 827, 992, 2486, 3112 |
| CspI | CGGWCCG | 1 cut(s) | 154 |
| DraI | TTTAAA | 1 cut(s) | 1603 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 224 |
| DriI | GACNNNNNGTC | 1 cut(s) | 5081 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 224 |
| EaeI | YGGCCR | 2 cut(s) | 2804, 4868 |
| Eam1104I | CTCTTC | 6 cut(s) | 319, 373, 1910, 2214, 3335, 4872 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 5081 |
| EarI | CTCTTC | 6 cut(s) | 319, 373, 1910, 2214, 3335, 4872 |
| EciI | GGCGGA | 1 cut(s) | 126 |
| Ecl136II | GAGCTC | 6 cut(s) | 82, 161, 1963, 3326, 4451, 4517 |
| Eco130I | CCWWGG | 4 cut(s) | 553, 1485, 1929, 3021 |
| Eco24I | GRGCYC | 7 cut(s) | 84, 163, 363, 1965, 3328, 4453, 4519 |
| Eco31I | GGTCTC | 1 cut(s) | 5089 |
| Eco32I | GATATC | 2 cut(s) | 4105, 4633 |
| Eco47I | GGWCC | 2 cut(s) | 154, 1435 |
| Eco53kI | GAGCTC | 6 cut(s) | 82, 161, 1963, 3326, 4451, 4517 |
| Eco57I | CTGAAG | 4 cut(s) | 1514, 2061, 2162, 5011 |
| Eco88I | CYCGRG | 3 cut(s) | 627, 4431, 5558 |
| EcoICRI | GAGCTC | 6 cut(s) | 82, 161, 1963, 3326, 4451, 4517 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 857 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3115 |
| EcoRV | GATATC | 2 cut(s) | 4105, 4633 |
| EcoT14I | CCWWGG | 4 cut(s) | 553, 1485, 1929, 3021 |
| EcoT22I | ATGCAT | 2 cut(s) | 3872, 4926 |
| EcoT38I | GRGCYC | 7 cut(s) | 84, 163, 363, 1965, 3328, 4453, 4519 |
| ErhI | CCWWGG | 4 cut(s) | 553, 1485, 1929, 3021 |
| Esp3I | CGTCTC | 2 cut(s) | 298, 4036 |
| FaqI | GGGAC | 3 cut(s) | 841, 1594, 4776 |
| FauI | CCCGC | 1 cut(s) | 57 |
| FauNDI | CATATG | 5 cut(s) | 1117, 2190, 3696, 4089, 4873 |
| FbaI | TGATCA | 5 cut(s) | 427, 1173, 2101, 3271, 4780 |
| FblI | GTMKAC | 1 cut(s) | 4852 |
| FriOI | GRGCYC | 7 cut(s) | 84, 163, 363, 1965, 3328, 4453, 4519 |
| FspI | TGCGCA | 1 cut(s) | 3234 |
| GlaI | GCGC | 4 cut(s) | 198, 347, 2069, 3234 |
| GsaI | CCCAGC | 1 cut(s) | 5507 |
| HapII | CCGG | 6 cut(s) | 628, 906, 993, 2341, 3386, 5499 |
| HgaI | GACGC | 5 cut(s) | 13, 827, 992, 2486, 3112 |
| HhaI | GCGC | 4 cut(s) | 199, 348, 2070, 3235 |
| Hin1I | GRCGYC | 3 cut(s) | 5, 225, 2497 |
| Hin6I | GCGC | 4 cut(s) | 197, 346, 2068, 3233 |
| HinP1I | GCGC | 4 cut(s) | 197, 346, 2068, 3233 |
| HincII | GTYRAC | 4 cut(s) | 3702, 4085, 4573, 4600 |
| HindII | GTYRAC | 4 cut(s) | 3702, 4085, 4573, 4600 |
| HindIII | AAGCTT | 4 cut(s) | 1760, 2927, 3401, 4032 |
| HpaI | GTTAAC | 1 cut(s) | 3702 |
| HpaII | CCGG | 6 cut(s) | 628, 906, 993, 2341, 3386, 5499 |
| Hpy99I | CGWCG | 2 cut(s) | 115, 154 |
| HpyAV | CCTTC | 9 cut(s) | 990, 1366, 1622, 2007, 2020, 2419, 2464, 2896, 3143 |
| HpyCH4IV | ACGT | 6 cut(s) | 225, 283, 447, 1074, 3669, 5352 |
| HpySE526I | ACGT | 6 cut(s) | 225, 283, 447, 1074, 3669, 5352 |
| Hsp92I | GRCGYC | 3 cut(s) | 5, 225, 2497 |
| HspAI | GCGC | 4 cut(s) | 197, 346, 2068, 3233 |
| Kpn2I | TCCGGA | 1 cut(s) | 2340 |
| KpnI | GGTACC | 1 cut(s) | 942 |
| Ksp22I | TGATCA | 5 cut(s) | 427, 1173, 2101, 3271, 4780 |
| KspAI | GTTAAC | 1 cut(s) | 3702 |
| MaeII | ACGT | 6 cut(s) | 225, 283, 447, 1074, 3669, 5352 |
| MbiI | CCGCTC | 1 cut(s) | 395 |
| MfeI | CAATTG | 1 cut(s) | 3168 |
| MlsI | TGGCCA | 1 cut(s) | 4870 |
| MluI | ACGCGT | 1 cut(s) | 3121 |
| MluNI | TGGCCA | 1 cut(s) | 4870 |
| MlyI | GAGTC | 5 cut(s) | 581, 2209, 4430, 4945, 5550 |
| MmeI | TCCRAC | 5 cut(s) | 132, 941, 1246, 1879, 3333 |
| Mox20I | TGGCCA | 1 cut(s) | 4870 |
| Mph1103I | ATGCAT | 2 cut(s) | 3872, 4926 |
| MroI | TCCGGA | 1 cut(s) | 2340 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1076, 3369, 5417 |
| MscI | TGGCCA | 1 cut(s) | 4870 |
| MslI | CAYNNNNRTG | 6 cut(s) | 264, 3007, 3183, 3865, 4275, 4500 |
| Msp20I | TGGCCA | 1 cut(s) | 4870 |
| MspA1I | CMGCKG | 2 cut(s) | 52, 548 |
| MspI | CCGG | 6 cut(s) | 628, 906, 993, 2341, 3386, 5499 |
| MssI | GTTTAAAC | 1 cut(s) | 1603 |
| MunI | CAATTG | 1 cut(s) | 3168 |
| Mva1269I | GAATGC | 3 cut(s) | 199, 2863, 4426 |
| MvnI | CGCG | 1 cut(s) | 3123 |
| NciI | CCSGG | 3 cut(s) | 628, 629, 3386 |
| NcoI | CCATGG | 2 cut(s) | 1929, 3021 |
| NdeI | CATATG | 5 cut(s) | 1117, 2190, 3696, 4089, 4873 |
| NlaIV | GGNNCC | 6 cut(s) | 940, 1377, 1627, 1801, 3000, 5491 |
| NmeAIII | GCCGAG | 2 cut(s) | 24, 5260 |
| NmuCI | GTSAC | 5 cut(s) | 120, 752, 4883, 4940, 5056 |
| NsbI | TGCGCA | 1 cut(s) | 3234 |
| NsiI | ATGCAT | 2 cut(s) | 3872, 4926 |
| NspV | TTCGAA | 2 cut(s) | 97, 3258 |
| PaeI | GCATGC | 3 cut(s) | 1246, 3320, 4928 |
| PaeR7I | CTCGAG | 2 cut(s) | 4431, 5558 |
| PagI | TCATGA | 5 cut(s) | 886, 2319, 2616, 2959, 4333 |
| PaqCI | CACCTGC | 1 cut(s) | 1187 |
| PciI | ACATGT | 3 cut(s) | 705, 3008, 5404 |
| PctI | GAATGC | 3 cut(s) | 199, 2863, 4426 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1076, 3369, 5417 |
| PflFI | GACNNNGTC | 1 cut(s) | 1211 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2515 |
| PleI | GAGTC | 5 cut(s) | 581, 2208, 4430, 4945, 5550 |
| PmeI | GTTTAAAC | 1 cut(s) | 1603 |
| PpsI | GAGTC | 5 cut(s) | 581, 2208, 4430, 4945, 5550 |
| PscI | ACATGT | 3 cut(s) | 705, 3008, 5404 |
| PshBI | ATTAAT | 1 cut(s) | 3518 |
| PsiI | TTATAA | 3 cut(s) | 521, 720, 2985 |
| Psp124BI | GAGCTC | 6 cut(s) | 84, 163, 1965, 3328, 4453, 4519 |
| Psp1406I | AACGTT | 2 cut(s) | 1074, 3669 |
| PspFI | CCCAGC | 1 cut(s) | 5503 |
| PspN4I | GGNNCC | 6 cut(s) | 940, 1377, 1627, 1801, 3000, 5491 |
| PspPI | GGNCC | 7 cut(s) | 47, 154, 560, 1435, 3115, 4351, 5501 |
| PspXI | VCTCGAGB | 1 cut(s) | 5558 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2614, 2646 |
| PstI | CTGCAG | 1 cut(s) | 5082 |
| PstNI | CAGNNNCTG | 2 cut(s) | 836, 2515 |
| PsyI | GACNNNGTC | 1 cut(s) | 1211 |
| PvuII | CAGCTG | 1 cut(s) | 548 |
| RseI | CAYNNNNRTG | 6 cut(s) | 264, 3007, 3183, 3865, 4275, 4500 |
| Rsr2I | CGGWCCG | 1 cut(s) | 154 |
| RsrII | CGGWCCG | 1 cut(s) | 154 |
| SacI | GAGCTC | 6 cut(s) | 84, 163, 1965, 3328, 4453, 4519 |
| Sau96I | GGNCC | 7 cut(s) | 47, 154, 560, 1435, 3115, 4351, 5501 |
| ScaI | AGTACT | 1 cut(s) | 730 |
| SchI | GAGTC | 5 cut(s) | 581, 2209, 4430, 4945, 5550 |
| SfcI | CTRYAG | 2 cut(s) | 1040, 5078 |
| Sfr274I | CTCGAG | 2 cut(s) | 4431, 5558 |
| SfuI | TTCGAA | 2 cut(s) | 97, 3258 |
| SinI | GGWCC | 2 cut(s) | 154, 1435 |
| SlaI | CTCGAG | 2 cut(s) | 4431, 5558 |
| SmaI | CCCGGG | 1 cut(s) | 629 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 264, 3007, 3183, 3865, 4275, 4500 |
| SpeI | ACTAGT | 2 cut(s) | 2750, 5395 |
| SphI | GCATGC | 3 cut(s) | 1246, 3320, 4928 |
| SsiI | CCGC | 7 cut(s) | 50, 137, 200, 393, 679, 3971, 5529 |
| SspI | AATATT | 1 cut(s) | 5536 |
| SstI | GAGCTC | 6 cut(s) | 84, 163, 1965, 3328, 4453, 4519 |
| StyI | CCWWGG | 4 cut(s) | 553, 1485, 1929, 3021 |
| TaiI | ACGT | 6 cut(s) | 228, 286, 450, 1077, 3672, 5355 |
| TaqII | GACCGA | 2 cut(s) | 171, 2596 |
| TatI | WGTACW | 5 cut(s) | 728, 961, 1149, 2621, 2767 |
| TauI | GCSGC | 2 cut(s) | 202, 3974 |
| TscAI | CASTG | 7 cut(s) | 376, 2221, 2448, 2606, 3601, 3867, 4062 |
| TseFI | GTSAC | 5 cut(s) | 120, 752, 4883, 4940, 5056 |
| Tsp45I | GTSAC | 5 cut(s) | 120, 752, 4883, 4940, 5056 |
| TspGWI | ACGGA | 1 cut(s) | 3527 |
| TspMI | CCCGGG | 1 cut(s) | 627 |
| TspRI | CASTG | 7 cut(s) | 376, 2221, 2448, 2606, 3601, 3867, 4062 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1211 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2515 |
| VneI | GTGCAC | 1 cut(s) | 1920 |
| VpaK11BI | GGWCC | 2 cut(s) | 154, 1435 |
| VspI | ATTAAT | 1 cut(s) | 3518 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 857 |
| XbaI | TCTAGA | 2 cut(s) | 590, 2299 |
| XhoI | CTCGAG | 2 cut(s) | 4431, 5558 |
| XmaI | CCCGGG | 1 cut(s) | 627 |
| XmiI | GTMKAC | 1 cut(s) | 4852 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1076, 3369, 5417 |
| ZraI | GACGTC | 1 cut(s) | 226 |
| ZrmI | AGTACT | 1 cut(s) | 730 |
| Zsp2I | ATGCAT | 2 cut(s) | 3872, 4926 |