RchiOBHm_Chr2g0088511

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0001803
Physical Location & Seq
Reverse (-)
3024008 .. 3041463
17456 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46383

Sequence Viewer

Length: 5646 bp
ATGACGCCGAAGCAGCTCCTCGCGGTAATCGAATCGGCGCTACTAGGCCCGCTGCCTAGCCCATCTCAGAGAGTGGAGCTCATGCACGCTATTCGAAGCTCTCTCCCGTCGCTCCAGTCCCTCCTCTCATATCCGCCTCCGAAGCCGTCGGACCGAGCTCAAGTTCAGTCCAAAGAAGTTAGGCTTCCGAATGGGCCACCGATTTTGCTTGATGACCAGGACGTCCAGATTGCTTTGAAGTTAAGTGATGACCTCCATCTCAACGAGATTGATTGTGTCCGTTTGATTGTCTCTGCAAATCAAGAGTGGGGCTTAATGGGAAGAGAGCCACTAGAAATTTTGCGCCTTGCAACAGGGCTCTGGTACACTGAGAGAAGAGATCTATTAACAGCTGTCTATACACTTTTAAGGGCTGTTGTGCTTGATCAGGGACTTGAAGCTGAAGTTGTATCTGACATTCAAAAATATCTGGAAAATCTTATCAATAATGGGCTTAGACAGAGGTTAATATCTCTTATAAAGGAACTTAATCGAGAAGAACCAGCTGGCCTGGGCGGGCCTCATTCTGAACGTTATGTTCTCGATTCTAGAGGTGCTCTTGTTGTACGACAAGCTGTGGTTTCCCGGGAAAGGCTCATACTTGGACACTGCCTCGTTCTTTCTATTCTGGTTGTGCGGACAAGTCCAAAGGATGTAAAGGATATATTTCTCGTGTATAAAGATAGTGCTTCTGAACTTAGTGGGACTAATGACACTATAAAACGCCAGATTACATTCAGTCTTCTTTTTTCTCTTGTGATCGCTTTCGTATCAGACGCTCTGAGTGCAGCACCTGATAAAGCATCTGTCCTGTCCCAGGATGCATCTTTTAGACATGAATTTCATGAAATCGTAATGGCAGCCGGAAATGATCCAAATGTTGAGGGCTTTGTCGGTACCATAAGGCTTGCTTGGGCTGTACACTTGATGTTAATACAAGATGCTCTTCCCGGAAGGGATGCTATTTCAAGTGCTTCATCGAGTGATTTGGGTTATCTCCAGTTGTGCTTGGAAGTGGTTTTTTCAAAGAACGTTTTCCAGTTTATATTAGATGAAGTTCTTAAAACTGCAGCTTATGAGAATGATGACGAGGATATAAGCTATATGTACAATGCTTATCTTCACAAGTTGATCACCTGCTTCTTATCTCACCCACTTGCTAGAGACAAGGTCAAAGAATCAAAGGAGAGGGCAATGAGCATGCTTAGTCCATACCGCCTGGTTGGATCACATGATTTTTTGCATGATAGTAACCAAACTTCACAAGCCTCTGAAAATGGTCCACTACCATTCGTCTCTCTTTTGGAGTTTGTGAGTGGAATTTATCAGAAGGAACCAGAGCTGTTGTCTGGCAATGATGTCTTGTGGACCTTTGTGAACTTTGCTGGAGAGGACCATACAAATTTTCAAACCCTTGTGGCGTTCTTGAATATGCTGAGTACCTTGGCTTCTAGTCAAGAAGGTGCTGCAAAGGTTTTTGAGTTACTTCAGGGAAAAGTGTTTCGTTCTGTTGGTTGGAGCACTTTGTTTGATAGCTTATCAATTTATGACGAGAAGTTTAAACAGTCCCTTCAAACTGCTGGTGCCATGTTACCGGAACTCCCAGAGGGTGATGCAAAAGCACTCGTTGCTTATTTGAATGTCCTTCAAAAGGTTGTGGAAAATGGAAATCCCCTTGAACGAAAGAACTGGTTTCCTGATATTGAGCCTTTGTTTAAGCTTCTTTGTTATGAAAATGTGCCTCCTTATCTAAAGGGTGCCTTGCGTAATGCAATAACAACTTTTGTATATGTTTCTCCTGTCCTAAAAGATACAGTCTGGAGTTATCTTGAGCAGTATGATCTCCCCGTGGTTGTTGGATCTCATGTTGGGAAGAGTGCACAGCCCATGGCTGCACAGGTGTATGATATGCAATTTGAGCTCAATGAAATAGAAGCAAGGAGAGAGCAATATCCTTCAACAATATCCTTCCTTAACCTGTTAAATGCTCTTATATCTGAAGAAAGAGACTTAAGTGATAGAGGGCGCAGATTCATTGGAATTTTCAGGTTCATTTATGATCATGTTTTTAGGCCATTCCCTCAAAGAGCCTATGCCGATCCTTGTGAGAAATGGCAATTAGTTGTTGCATGTCTTCAGCACTTTCATATGATGTTGAGTCTGTATGACATCAGTGAAGAGGATATTGATGGTGTCATTGATCAATCTCAGCTTTCAACAGTAACACAATCTTCACTCCAGATGCAGCTACCAATTCTAGAATTGCTAAAAGACTTTATGAGTGGAAAATCTGTTTTCCGGAACATCATGGGCATCCTTCTGCCAGGTGTCAATACCATTATAACTGAACGAACAAATCAAGTGTACGGGAAACTCTTAGAGAAGGCTGTGCAACTCTCATTGGAGATTATAATCCTTGTCTTGGAGAAGGATTTGCTTCTTTCTGATTTCTGGCGTCCTCTGTACCAGCCTCTGGATGTTATACTCTCTCAAGATCATAATCAAATTGTAGCTTTATTGGAATATGTCAGATATGATTTTCGACCACAAATTCAGCAGTGCTCTGTCAAAATCATGATTTGTTCTCGCATGGTCGGGCTTGTACAATTACTGCTAAAGTCAAATGCTGCAAGCTGTTTGATTGAGGATTATGCAGCCTGCCTAGAATTACGATCAGAGGATTCTCAGGTGATAGAGAACGCTAGTGATGATCCAGGTGTACTAATATTGCAGCTTCTAACTGACAATATCAGTCGGCCAGCTCCCAATATCACCCATTTGCTACTCAAATTTGATCTTGACAGTCCCATTGAGCGTACTGTGCTACAACCAAAATTTCATTACAGTTGCTTGAAGGTTATCCTTGAGATCTTGGAGAAGCTTTCAAAGCCTGATGTGAATATGTTACTTCATGAATTTGGTTTTCAGCTCCTTTATAAATTGTGTGTGGATCCACTAACATGTGATCCTGCGATGGATCTGTTGAGTAGTAAGAAGTATCAGTTTTTTGTAAAGCACCTAGATACGATTGGGGTTGCCCCACTTCCTAAAAGGAGGAACAACCAGGCCCTACGCGTCAGTTCCCTTCATCAGAGAGCTTGGCTGTTGAAACTACTAGCTATTGAACTTCATGTTGGTGATGTCAATAAATCCACTCACCTAGAAACATCTCGTAGCATCCTTGCGCATCTTTTTGGGCAGGAAACTTTCGAAACTGGAATTGATCACCTCGTGTCTCATTCGTTTTCTCCTCAAGATGGTGTTGAACATTCTGGAACCCAAACTGTCGGGAAGAGTAAGGTGTTGGAGTTGCTTGAAGTGGTTCAGTTTAGATCCCCCGATACAAACACGAAGCTTTCTGAGATTGTTTCCAATACGAAATATGATTTGTTGGCAGAGGATGTAGTTTGTAATCCTACTTCTGGAAAAAGTGGTGTCCATTACTATTCGGAGCGTGGTGATCGATTGATAGACCTTGCGTCATTCCGTGATAAACTTTGGCAGAAATTCAATGCTGTTTATCCCCACTTGAGTAACATTGGAAGTGAAGCAGAGCTGAACGATGCAAAAGAAACAATTCAACAGTTGTTGAGATGGGGATGGAAGAACAATAAGAACGTTGAAGAGCAAGCTGCCCAACTTCATATGTTAACCGCCTGGTCGCAAGTTGTTGAGATCTCTGCTTCCCGAAGAATATCATCACTTGGACATCAATCTGAACTTCTATATCAGATTCTTGTAGCTGCTTTGACTGCTTCTGCTTCTCAAGATTGTTCATTAAAGATGGCATTTTTGTTGTGTCAGGTTGCATTGACATGCATGGCAAAGTTACGAGATGAAAGATTTTTATTCCCTGGTGGCTTTAGTTCTGATAATCAGGCATGTCTTGATATTATCATGGCAAAGCAATTACCAAATGCAGCTTGTCATTCAATCCTGTTTAGGCTCATATTGGCAATTCTCAGACTTGAATCATCAGAAGCCTTAAGGAGACGGCAATATGCATTGCTCCTCAGCTATTTTCAGTATTGTCAGCATATGCTTGATCCAGATATCCCATCAACAGTTCTGCAATTTTTGTTGCTTGATGAGCAAGAGGGTGAAGATCTGGATCTCCAGAAGATCAATCGAGAACAAGCAGAACTTGCCCGTGCCAATTTCAATATTTTAAGAAAAGAAGCTCAATCTATTTTGGATTTGGTAATAAAAGATGCTACTCAAGGAAGTGAACTTGGGAAGACTATGGCACTCTATGTTTTGGATGCAATCATCTGTGTAGATCATGATAGATATTTCCTGGGCCAACTTCAAAGCAGGGGTTTCCTAAGATCTTGTCTTACGAACATCAGCAGCTTATCTTATCAGGATGGTGCACATTCTCGAGAATCAATGCAGCGAGCGCAAACTCTGGAGGCTGAACTTGCTTTGCTTTTGAGAATAAGCCATAAGTATGGGAAATCTGGAGCTCAGGTTATCTTTACAATGGGGGCTTTGGAGCATATTGCTTCATGCAGGGCGGTCAACGTTTTCGGAAGTTTGCGATGGATTGACACTAAGAATCAAAGAAATGTTTCTGTGGATATCAACAAGCAAAGGATGATTGTAACCCCTATTCTGAGATTGGTGTTTTCTCTGTTGTCTCTAGTTGATACATCCGAATTTTATGAGGTGAAGAATAAAGTTGTTCGGGAAGTCATAGAATTTGTCAAGGGACATAGATCACTTTTTGATCATGTTCTTCGGGAAGACATTTCCCAAGCTGATGAGTTGGTGATGGAGCAGATAAACCTCGTTGTTGGTATACTAAGCAAGGTTTGGCCATATGAAGAGAGTGACGAATCTGGCTTTGTTCAAGGTCTTTTTTGTTTGATACATGCTCTTTTCTCTCGTGACTGTGAGACTCTAAGTTCTGCTCAATCAGTTCGATCTGTTGAGAATCACAGGAAAACAGAGCTTAACTCATTTCGAATATGCTTCAGCCTCAGCTCATATCTATATTTTCTAGTCACAAAGAAGTCCTTTAGACTGCAGGTCTCAGACATGCCTCCTGATTACAATGCTGCCGTTTCCTTTCAACAGCCAACATTGAGTTTGCTTGGATCTTTTCTCACTTCTTTAACAAGTGCTCTTGAAAGAGCTGCTGAGGAAAAATCCTTGCTTCTTAATAGGATTCGAGACATAAATGAATTATCAAGACAGGAGGTGGATGAAATTATCAATATGTATGCTCGGCAAGTGTATGTTTCATCATCTGACAATATACAGAAAAGGAGGTATATTGCGATGGTGGAAATGTGCCATGTTGTCGGGAATAGAGATCAGTTAATAACTATATTACTTCCACTAGTGGAACATGTGCTGAATGTCTTCCTAAGCCATTTTCAGGACAGCTCTTTGGCATCTGATCCCGCTCGCTCTTTGAAGACAATTACATACGGTGCCAACTCTGGCCCAGAACAAGACATATCTTTGTTGTGCGGAAATCTTATTTTGACTTTAGAAAGACTCGAGTTACTTAGTGAGGACAAAATAGGCCACAATCTTAAAGTGTTTCGAAGATTAGTGACTTCGCTCAAGGAAATGACGATCCAAAAGTTGTCTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
Nup192

Protein Analysis

1881

Amino Acids

212.36

Weight (kDa)

5.59

Isoelectric Point (pI)

48.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nup192 PF11894 24 - 1602 7.9e-100 Nuclear pore complex scaffold, nucleoporins 186/192/205
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 518, 2381, 2450, 2976
AarI CACCTGC 1 cut(s) 1184
AasI GACNNNNNNGTC 1 cut(s) 221
AatII GACGTC 1 cut(s) 225
Acc16I TGCGCA 1 cut(s) 3225
Acc36I ACCTGC 2 cut(s) 1184, 5059
Acc65I GGTACC 1 cut(s) 935
AccB1I GGYRCC 4 cut(s) 935, 1622, 1796, 5477
AccB7I CCANNNNNTGG 1 cut(s) 2512
AccBSI CCGCTC 1 cut(s) 5450
AccI GTMKAC 1 cut(s) 4840
AccII CGCG 2 cut(s) 23, 3114
AccIII TCCGGA 1 cut(s) 2337
AclI AACGTT 4 cut(s) 571, 1071, 3657, 4563
AcoI YGGCCR 2 cut(s) 2795, 4856
AcuI CTGAAG 5 cut(s) 462, 1511, 2058, 2159, 4999
AcyI GRCGYC 3 cut(s) 5, 222, 2494
AdeI CACNNNGTG 1 cut(s) 3271
AfiI CCNNNNNNNGG 8 cut(s) 630, 856, 1690, 2461, 2512, 3296, 3461, 5422
AflII CTTAAG 2 cut(s) 2050, 4024
AflIII ACRYGT 3 cut(s) 2999, 3112, 5392
AhdI GACNNNNNGTC 2 cut(s) 3517, 5069
AhlI ACTAGT 1 cut(s) 5383
AjuI GAANNNNNNNTTGG 2 cut(s) 3156, 3188
Alw44I GTGCAC 2 cut(s) 1917, 4410
AlwNI CAGNNNCTG 2 cut(s) 833, 2512
Ama87I CYCGRG 3 cut(s) 624, 4419, 5546
Aor13HI TCCGGA 1 cut(s) 2337
ApaLI GTGCAC 2 cut(s) 1917, 4410
Asp700I GAANNNNTTC 5 cut(s) 1073, 3360, 3615, 4609, 5405
Asp718I GGTACC 1 cut(s) 935
AspLEI GCGC 5 cut(s) 40, 345, 2067, 3226, 4441
AsuC2I CCSGG 3 cut(s) 625, 626, 990
AsuII TTCGAA 4 cut(s) 94, 3249, 5005, 5593
AvaI CYCGRG 3 cut(s) 624, 4419, 5546
AvaII GGWCC 4 cut(s) 151, 1319, 1407, 1432
BaeGI GKGCMC 2 cut(s) 1921, 4414
BalI TGGCCA 1 cut(s) 4858
BamHI GGATCC 1 cut(s) 2989
BanI GGYRCC 4 cut(s) 935, 1622, 1796, 5477
BanII GRGCYC 5 cut(s) 81, 160, 360, 1962, 4507
BarI GAAGNNNNNNTAC 6 cut(s) 1282, 1314, 1471, 1503, 3442, 3474
BauI CACGAG 3 cut(s) 710, 3269, 4926
BbsI GAAGAC 7 cut(s) 773, 2165, 4283, 4791, 5398, 5468, 5631
BbvCI CCTCAGC 3 cut(s) 4052, 5021, 5181
BceAI ACGGC 3 cut(s) 130, 4049, 5087
BcgI CGANNNNNNTGC 2 cut(s) 74, 108
BclI TGATCA 6 cut(s) 424, 1170, 2098, 2239, 3262, 4768
BcnI CCSGG 3 cut(s) 625, 626, 990
BcuI ACTAGT 1 cut(s) 5383
BfmI CTRYAG 2 cut(s) 1107, 5066
BfoI RGCGCY 1 cut(s) 41
BfrI CTTAAG 2 cut(s) 2050, 4024
BfuAI ACCTGC 2 cut(s) 1184, 5059
BglII AGATCT 5 cut(s) 379, 2907, 3714, 4144, 4367
Bme18I GGWCC 4 cut(s) 151, 1319, 1407, 1432
BmeRI GACNNNNNGTC 2 cut(s) 3517, 5069
BmeT110I CYCGRG 3 cut(s) 624, 4419, 5546
BmiI GGNNCC 7 cut(s) 937, 1374, 1624, 1798, 2991, 3316, 5479
BpiI GAAGAC 7 cut(s) 773, 2165, 4283, 4791, 5398, 5468, 5631
BplI GAGNNNNNCTC 4 cut(s) 63, 95, 4982, 5014
BpmI CTGGAG 8 cut(s) 98, 1022, 1446, 1879, 2261, 4139, 4469, 4521
Bpu10I CCTNAGC 5 cut(s) 4052, 4506, 5021, 5181, 5411
Bpu14I TTCGAA 4 cut(s) 94, 3249, 5005, 5593
BpuEI CTTGAG 9 cut(s) 144, 1889, 2514, 2924, 3276, 3589, 3789, 4242, 5597
BpuMI CCSGG 3 cut(s) 625, 626, 990
Bsa29I ATCGAT 1 cut(s) 3502
BsaBI GATNNNNATC 3 cut(s) 2450, 2538, 4149
BsaHI GRCGYC 3 cut(s) 5, 222, 2494
BsaI GGTCTC 1 cut(s) 5077
BsaJI CCNNGG 8 cut(s) 550, 624, 855, 1482, 1887, 1926, 3892, 4336
BsaWI WCCGGW 2 cut(s) 1633, 2337
BsaXI ACNNNNNCTCC 4 cut(s) 1623, 1653, 4494, 4524
Bsc4I CCNNNNNNNGG 8 cut(s) 630, 856, 1690, 2461, 2512, 3296, 3461, 5422
Bse1I ACTGG 5 cut(s) 115, 1039, 1078, 1733, 3259
Bse3DI GCAATG 3 cut(s) 1239, 1399, 4043
Bse8I GATNNNNATC 3 cut(s) 2450, 2538, 4149
BseAI TCCGGA 1 cut(s) 2337
BseCI ATCGAT 1 cut(s) 3502
BseDI CCNNGG 8 cut(s) 550, 624, 855, 1482, 1887, 1926, 3892, 4336
BseJI GATNNNNATC 3 cut(s) 2450, 2538, 4149
BseLI CCNNNNNNNGG 8 cut(s) 630, 856, 1690, 2461, 2512, 3296, 3461, 5422
BseMI GCAATG 3 cut(s) 1239, 1399, 4043
BseNI ACTGG 5 cut(s) 115, 1039, 1078, 1733, 3259
BseRI GAGGAG 4 cut(s) 8, 113, 3279, 4040
BseSI GKGCMC 2 cut(s) 1921, 4414
BsgI GTGCAG 2 cut(s) 846, 1917
Bsh1236I CGCG 2 cut(s) 23, 3114
BshNI GGYRCC 4 cut(s) 935, 1622, 1796, 5477
BshVI ATCGAT 1 cut(s) 3502
BsiHKCI CYCGRG 3 cut(s) 624, 4419, 5546
BsiSI CCGG 5 cut(s) 625, 903, 990, 1634, 2338
BslFI GGGAC 7 cut(s) 103, 444, 757, 838, 1591, 2829, 4764
BslI CCNNNNNNNGG 8 cut(s) 630, 856, 1690, 2461, 2512, 3296, 3461, 5422
BsmBI CGTCTC 2 cut(s) 1339, 4024
BsmFI GGGAC 7 cut(s) 103, 444, 757, 838, 1591, 2829, 4764
Bso31I GGTCTC 1 cut(s) 5077
BsoBI CYCGRG 3 cut(s) 624, 4419, 5546
Bsp119I TTCGAA 4 cut(s) 94, 3249, 5005, 5593
Bsp13I TCCGGA 1 cut(s) 2337
Bsp1407I TGTACA 3 cut(s) 958, 1146, 2641
Bsp19I CCATGG 1 cut(s) 1926
BspDI ATCGAT 1 cut(s) 3502
BspEI TCCGGA 1 cut(s) 2337
BspFNI CGCG 2 cut(s) 23, 3114
BspHI TCATGA 5 cut(s) 883, 2613, 2950, 4321, 5642
BspLI GGNNCC 7 cut(s) 937, 1374, 1624, 1798, 2991, 3316, 5479
BspMAI CTGCAG 2 cut(s) 1111, 5070
BspMI ACCTGC 2 cut(s) 1184, 5059
BspQI GCTCTTC 2 cut(s) 990, 3657
BspT104I TTCGAA 4 cut(s) 94, 3249, 5005, 5593
BspT107I GGYRCC 4 cut(s) 935, 1622, 1796, 5477
BspTI CTTAAG 2 cut(s) 2050, 4024
BspTNI GGTCTC 1 cut(s) 5077
BsrBI CCGCTC 1 cut(s) 5450
BsrDI GCAATG 3 cut(s) 1239, 1399, 4043
BsrGI TGTACA 3 cut(s) 958, 1146, 2641
BsrI ACTGG 5 cut(s) 115, 1039, 1078, 1733, 3259
BssECI CCNNGG 8 cut(s) 550, 624, 855, 1482, 1887, 1926, 3892, 4336
BssNAI GTATAC 1 cut(s) 4841
BssNI GRCGYC 3 cut(s) 5, 222, 2494
BssSI CACGAG 3 cut(s) 710, 3269, 4926
BssT1I CCWWGG 2 cut(s) 1482, 1926
Bst1107I GTATAC 1 cut(s) 4841
Bst2BI CACGAG 3 cut(s) 710, 3269, 4926
Bst6I CTCTTC 8 cut(s) 316, 370, 990, 1907, 2211, 3326, 3657, 4860
BstACI GRCGYC 3 cut(s) 5, 222, 2494
BstAFI CTTAAG 2 cut(s) 2050, 4024
BstAPI GCANNNNNTGC 2 cut(s) 1667, 4184
BstAUI TGTACA 3 cut(s) 958, 1146, 2641
BstBI TTCGAA 4 cut(s) 94, 3249, 5005, 5593
BstDSI CCRYGG 2 cut(s) 1887, 1926
BstENI CCTNNNNNAGG 2 cut(s) 854, 1688
BstFNI CGCG 2 cut(s) 23, 3114
BstH2I RGCGCY 1 cut(s) 41
BstHHI GCGC 5 cut(s) 40, 345, 2067, 3226, 4441
BstNSI RCATGY 8 cut(s) 1243, 2172, 3003, 3858, 3924, 4916, 5083, 5396
BstSFI CTRYAG 2 cut(s) 1107, 5066
BstSLI GKGCMC 2 cut(s) 1921, 4414
BstUI CGCG 2 cut(s) 23, 3114
BstV2I GAAGAC 7 cut(s) 773, 2165, 4283, 4791, 5398, 5468, 5631
BstXI CCANNNNNNTGG 1 cut(s) 4490
BstZ17I GTATAC 1 cut(s) 4841
Bsu15I ATCGAT 1 cut(s) 3502
BsuTUI ATCGAT 1 cut(s) 3502
BtgI CCRYGG 2 cut(s) 1887, 1926
BtgZI GCGATG 3 cut(s) 3026, 4594, 5336
BtsI GCAGTG 2 cut(s) 646, 2603
BtsIMutI CAGTG 4 cut(s) 366, 646, 2218, 2603
BveI ACCTGC 2 cut(s) 1184, 5059
CaiI CAGNNNCTG 2 cut(s) 833, 2512
CciI TCATGA 5 cut(s) 883, 2613, 2950, 4321, 5642
CfoI GCGC 5 cut(s) 40, 345, 2067, 3226, 4441
Cfr9I CCCGGG 1 cut(s) 624
ClaI ATCGAT 1 cut(s) 3502
CpoI CGGWCCG 1 cut(s) 151
CseI GACGC 5 cut(s) 13, 824, 2483, 3103, 3507
CspCI CAANNNNNGTGG 2 cut(s) 186, 221
CspI CGGWCCG 1 cut(s) 151
DraI TTTAAA 1 cut(s) 1600
DraIII CACNNNGTG 1 cut(s) 3271
DrdI GACNNNNNNGTC 1 cut(s) 221
DriI GACNNNNNGTC 2 cut(s) 3517, 5069
DseDI GACNNNNNNGTC 1 cut(s) 221
EaeI YGGCCR 2 cut(s) 2795, 4856
Eam1104I CTCTTC 8 cut(s) 316, 370, 990, 1907, 2211, 3326, 3657, 4860
Eam1105I GACNNNNNGTC 2 cut(s) 3517, 5069
EarI CTCTTC 8 cut(s) 316, 370, 990, 1907, 2211, 3326, 3657, 4860
EciI GGCGGA 1 cut(s) 123
Ecl136II GAGCTC 4 cut(s) 79, 158, 1960, 4505
Eco130I CCWWGG 2 cut(s) 1482, 1926
Eco24I GRGCYC 5 cut(s) 81, 160, 360, 1962, 4507
Eco31I GGTCTC 1 cut(s) 5077
Eco32I GATATC 2 cut(s) 4093, 4621
Eco47I GGWCC 4 cut(s) 151, 1319, 1407, 1432
Eco53kI GAGCTC 4 cut(s) 79, 158, 1960, 4505
Eco57I CTGAAG 5 cut(s) 462, 1511, 2058, 2159, 4999
Eco88I CYCGRG 3 cut(s) 624, 4419, 5546
EcoICRI GAGCTC 4 cut(s) 79, 158, 1960, 4505
EcoNI CCTNNNNNAGG 2 cut(s) 854, 1688
EcoO109I RGGNCCY 1 cut(s) 3106
EcoRV GATATC 2 cut(s) 4093, 4621
EcoT14I CCWWGG 2 cut(s) 1482, 1926
EcoT22I ATGCAT 3 cut(s) 865, 3860, 4045
EcoT38I GRGCYC 5 cut(s) 81, 160, 360, 1962, 4507
ErhI CCWWGG 2 cut(s) 1482, 1926
Esp3I CGTCTC 2 cut(s) 1339, 4024
FaqI GGGAC 7 cut(s) 103, 444, 757, 838, 1591, 2829, 4764
FauI CCCGC 3 cut(s) 57, 548, 5455
FauNDI CATATG 4 cut(s) 2187, 3684, 4077, 4861
FbaI TGATCA 6 cut(s) 424, 1170, 2098, 2239, 3262, 4768
FblI GTMKAC 1 cut(s) 4840
FriOI GRGCYC 5 cut(s) 81, 160, 360, 1962, 4507
FspI TGCGCA 1 cut(s) 3225
GlaI GCGC 5 cut(s) 39, 344, 2066, 3225, 4440
GsuI CTGGAG 8 cut(s) 98, 1022, 1446, 1879, 2261, 4139, 4469, 4521
HaeII RGCGCY 1 cut(s) 41
HapII CCGG 5 cut(s) 625, 903, 990, 1634, 2338
HgaI GACGC 5 cut(s) 13, 824, 2483, 3103, 3507
HhaI GCGC 5 cut(s) 40, 345, 2067, 3226, 4441
Hin1I GRCGYC 3 cut(s) 5, 222, 2494
Hin6I GCGC 5 cut(s) 38, 343, 2065, 3224, 4439
HinP1I GCGC 5 cut(s) 38, 343, 2065, 3224, 4439
HincII GTYRAC 2 cut(s) 3690, 4561
HindII GTYRAC 2 cut(s) 3690, 4561
HindIII AAGCTT 3 cut(s) 1757, 2918, 3392
HpaI GTTAAC 1 cut(s) 3690
HpaII CCGG 5 cut(s) 625, 903, 990, 1634, 2338
Hpy99I CGWCG 2 cut(s) 112, 151
HpyCH4IV ACGT 5 cut(s) 222, 571, 1071, 3657, 4563
HpySE526I ACGT 5 cut(s) 222, 571, 1071, 3657, 4563
Hsp92I GRCGYC 3 cut(s) 5, 222, 2494
HspAI GCGC 5 cut(s) 38, 343, 2065, 3224, 4439
Kpn2I TCCGGA 1 cut(s) 2337
KpnI GGTACC 1 cut(s) 939
Ksp22I TGATCA 6 cut(s) 424, 1170, 2098, 2239, 3262, 4768
KspAI GTTAAC 1 cut(s) 3690
LguI GCTCTTC 2 cut(s) 990, 3657
MaeII ACGT 5 cut(s) 222, 571, 1071, 3657, 4563
MbiI CCGCTC 1 cut(s) 5450
MlsI TGGCCA 1 cut(s) 4858
MluI ACGCGT 1 cut(s) 3112
MluNI TGGCCA 1 cut(s) 4858
MlyI GAGTC 3 cut(s) 2206, 4933, 5538
MmeI TCCRAC 5 cut(s) 129, 1243, 1535, 1876, 3324
Mox20I TGGCCA 1 cut(s) 4858
Mph1103I ATGCAT 3 cut(s) 865, 3860, 4045
MroI TCCGGA 1 cut(s) 2337
MroXI GAANNNNTTC 5 cut(s) 1073, 3360, 3615, 4609, 5405
MscI TGGCCA 1 cut(s) 4858
MslI CAYNNNNRTG 4 cut(s) 2998, 3174, 3853, 4488
Msp20I TGGCCA 1 cut(s) 4858
MspA1I CMGCKG 3 cut(s) 52, 392, 545
MspCI CTTAAG 2 cut(s) 2050, 4024
MspI CCGG 5 cut(s) 625, 903, 990, 1634, 2338
MssI GTTTAAAC 1 cut(s) 1600
MvnI CGCG 2 cut(s) 23, 3114
NciI CCSGG 3 cut(s) 625, 626, 990
NcoI CCATGG 1 cut(s) 1926
NdeI CATATG 4 cut(s) 2187, 3684, 4077, 4861
NlaIV GGNNCC 7 cut(s) 937, 1374, 1624, 1798, 2991, 3316, 5479
NmeAIII GCCGAG 1 cut(s) 5248
NmuCI GTSAC 4 cut(s) 4871, 4928, 5044, 5602
NsbI TGCGCA 1 cut(s) 3225
NsiI ATGCAT 3 cut(s) 865, 3860, 4045
NspI RCATGY 8 cut(s) 1243, 2172, 3003, 3858, 3924, 4916, 5083, 5396
NspV TTCGAA 4 cut(s) 94, 3249, 5005, 5593
PaeI GCATGC 1 cut(s) 1243
PaeR7I CTCGAG 2 cut(s) 4419, 5546
PagI TCATGA 5 cut(s) 883, 2613, 2950, 4321, 5642
PaqCI CACCTGC 1 cut(s) 1184
PciI ACATGT 2 cut(s) 2999, 5392
PciSI GCTCTTC 2 cut(s) 990, 3657
PcsI WCGNNNNNNNCGW 1 cut(s) 27
PdmI GAANNNNTTC 5 cut(s) 1073, 3360, 3615, 4609, 5405
PflFI GACNNNGTC 1 cut(s) 1208
PflMI CCANNNNNTGG 1 cut(s) 2512
PfoI TCCNGGA 1 cut(s) 988
PleI GAGTC 3 cut(s) 2205, 4933, 5538
PmeI GTTTAAAC 1 cut(s) 1600
PpsI GAGTC 3 cut(s) 2205, 4933, 5538
PscI ACATGT 2 cut(s) 2999, 5392
PsiI TTATAA 4 cut(s) 518, 2381, 2450, 2976
Psp124BI GAGCTC 4 cut(s) 81, 160, 1962, 4507
Psp1406I AACGTT 4 cut(s) 571, 1071, 3657, 4563
PspN4I GGNNCC 7 cut(s) 937, 1374, 1624, 1798, 2991, 3316, 5479
PspXI VCTCGAGB 1 cut(s) 5546
PstI CTGCAG 2 cut(s) 1111, 5070
PstNI CAGNNNCTG 2 cut(s) 833, 2512
PsyI GACNNNGTC 1 cut(s) 1208
PvuII CAGCTG 2 cut(s) 392, 545
RseI CAYNNNNRTG 4 cut(s) 2998, 3174, 3853, 4488
Rsr2I CGGWCCG 1 cut(s) 151
RsrII CGGWCCG 1 cut(s) 151
SacI GAGCTC 4 cut(s) 81, 160, 1962, 4507
SapI GCTCTTC 2 cut(s) 990, 3657
SchI GAGTC 3 cut(s) 2206, 4933, 5538
SfcI CTRYAG 2 cut(s) 1107, 5066
Sfr274I CTCGAG 2 cut(s) 4419, 5546
SfuI TTCGAA 4 cut(s) 94, 3249, 5005, 5593
SinI GGWCC 4 cut(s) 151, 1319, 1407, 1432
SlaI CTCGAG 2 cut(s) 4419, 5546
SmaI CCCGGG 1 cut(s) 626
SmiMI CAYNNNNRTG 4 cut(s) 2998, 3174, 3853, 4488
SpeI ACTAGT 1 cut(s) 5383
SphI GCATGC 1 cut(s) 1243
SspI AATATT 2 cut(s) 2766, 4204
SstI GAGCTC 4 cut(s) 81, 160, 1962, 4507
StyI CCWWGG 2 cut(s) 1482, 1926
TaiI ACGT 5 cut(s) 225, 574, 1074, 3660, 4566
TaqII GACCGA 1 cut(s) 168
TatI WGTACW 4 cut(s) 958, 1146, 2641, 2758
TscAI CASTG 4 cut(s) 373, 653, 2218, 2603
TseFI GTSAC 4 cut(s) 4871, 4928, 5044, 5602
Tsp45I GTSAC 4 cut(s) 4871, 4928, 5044, 5602
TspGWI ACGGA 2 cut(s) 269, 3515
TspMI CCCGGG 1 cut(s) 624
TspRI CASTG 4 cut(s) 373, 653, 2218, 2603
Tth111I GACNNNGTC 1 cut(s) 1208
Van91I CCANNNNNTGG 1 cut(s) 2512
Vha464I CTTAAG 2 cut(s) 2050, 4024
VneI GTGCAC 2 cut(s) 1917, 4410
VpaK11BI GGWCC 4 cut(s) 151, 1319, 1407, 1432
XagI CCTNNNNNAGG 2 cut(s) 854, 1688
XbaI TCTAGA 2 cut(s) 587, 2296
XceI RCATGY 8 cut(s) 1243, 2172, 3003, 3858, 3924, 4916, 5083, 5396
XhoI CTCGAG 2 cut(s) 4419, 5546
XmaI CCCGGG 1 cut(s) 624
XmiI GTMKAC 1 cut(s) 4840
XmnI GAANNNNTTC 5 cut(s) 1073, 3360, 3615, 4609, 5405
ZraI GACGTC 1 cut(s) 223
Zsp2I ATGCAT 3 cut(s) 865, 3860, 4045
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.