Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51200 AT5G51200 AT5G51200 |
| fragaria_vesca | FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 |
| malus_domestica | MD02G1032900.v1.1 |
| prunus_persica | Prupe.7G242500_v2.0.a1 |
| pyrus_communis | pycom02g02700 |
| rosa_chinensis | RchiOBHm_Chr2g0088511 RchiOBHm_Chr5g0006961 RchiOBHm_Chr5g0007071 RchiOBHm_Chr5g0007211 RchiOBHm_Chr5g0007281 RchiOBHm_Chr5g0007291 RchiOBHm_Chr5g0007331 |
| rosa_laevigata | RLG00000015961 RLG00000031440 RLG00000031448 RLG00000031451 |
| rosa_multiflora | Rmu_sc0002566.1_g000004 Rmu_sc0004733.1_g000009 Rmu_sc0026502.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00152620 |
| rosa_rugosa | Rorug01G0484700 Rorug01G0484800 Rorug01G0484900 Rorug04G0425700 |
| rosa_samantha | Rh2AG039700 Rh2BG038600 Rh2CG039800 Rh2DG039100 Rh5AG053000 Rh5AG053400 Rh5AG054100 Rh5AG054500 Rh5CG060600 Rh5CG061000 |
| rosa_wichuraiana | Rw2G003100 Rw5G005170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 524, 2462 |
| Acc36I | ACCTGC | 1 cut(s) | 1050 |
| AccB1I | GGYRCC | 1 cut(s) | 1631 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2524 |
| AccBSI | CCGCTC | 1 cut(s) | 1554 |
| AccIII | TCCGGA | 1 cut(s) | 2349 |
| AciI | CCGC | 8 cut(s) | 59, 140, 203, 359, 682, 1261, 1552, 1628 |
| AclI | AACGTT | 1 cut(s) | 924 |
| AclWI | GGATC | 4 cut(s) | 911, 1279, 1449, 2141 |
| AcsI | RAATTY | 9 cut(s) | 342, 884, 1368, 1426, 1450, 1604, 1646, 2556, 2601 |
| AcuI | CTGAAG | 2 cut(s) | 2067, 2168 |
| AcyI | GRCGYC | 1 cut(s) | 2506 |
| AfaI | GTAC | 8 cut(s) | 371, 426, 837, 966, 1154, 1259, 1489, 2661 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 159, 358, 1563, 1657, 1699, 2473, 2524 |
| AflII | CTTAAG | 1 cut(s) | 2021 |
| AjnI | CCWGG | 2 cut(s) | 555, 2374 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2150, 2182 |
| Alw21I | GWGCWC | 6 cut(s) | 87, 579, 604, 1571, 1930, 2615 |
| Alw26I | GTCTC | 7 cut(s) | 75, 496, 1203, 1321, 1348, 1846, 1914 |
| Alw44I | GTGCAC | 1 cut(s) | 1926 |
| AlwI | GGATC | 4 cut(s) | 911, 1279, 1449, 2141 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 839, 2524, 2668 |
| Ama87I | CYCGRG | 1 cut(s) | 1846 |
| Aor13HI | TCCGGA | 1 cut(s) | 2349 |
| AoxI | GGCC | 4 cut(s) | 49, 553, 1327, 2120 |
| ApaI | GGGCCC | 1 cut(s) | 53 |
| ApaLI | GTGCAC | 1 cut(s) | 1926 |
| ApoI | RAATTY | 9 cut(s) | 342, 884, 1368, 1426, 1450, 1604, 1646, 2556, 2601 |
| AspLEI | GCGC | 2 cut(s) | 351, 1514 |
| AspS9I | GGNCC | 6 cut(s) | 49, 50, 157, 200, 563, 1328 |
| AsuC2I | CCSGG | 1 cut(s) | 161 |
| AsuHPI | GGTGA | 2 cut(s) | 814, 1187 |
| AvaI | CYCGRG | 1 cut(s) | 1846 |
| AvaII | GGWCC | 3 cut(s) | 157, 200, 563 |
| BaeGI | GKGCMC | 3 cut(s) | 53, 166, 1930 |
| BanI | GGYRCC | 1 cut(s) | 1631 |
| BanII | GRGCYC | 4 cut(s) | 53, 68, 87, 366 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1288, 1320, 1480, 1512 |
| BauI | CACGAG | 1 cut(s) | 452 |
| BbsI | GAAGAC | 3 cut(s) | 779, 2174, 2338 |
| Bbv12I | GWGCWC | 6 cut(s) | 87, 579, 604, 1571, 1930, 2615 |
| BccI | CCATC | 6 cut(s) | 38, 191, 270, 2231, 2287, 2396 |
| BceAI | ACGGC | 3 cut(s) | 629, 918, 2107 |
| BcgI | CGANNNNNNTGC | 3 cut(s) | 35, 80, 114 |
| BciT130I | CCWGG | 2 cut(s) | 557, 2376 |
| BciVI | GTATCC | 1 cut(s) | 997 |
| BclI | TGATCA | 2 cut(s) | 430, 1176 |
| BcnI | CCSGG | 1 cut(s) | 161 |
| BcoDI | GTCTC | 7 cut(s) | 75, 496, 1203, 1321, 1348, 1846, 1914 |
| BfaI | CTAG | 6 cut(s) | 587, 594, 630, 1500, 2657, 2720 |
| BfmI | CTRYAG | 3 cut(s) | 1043, 1113, 1535 |
| BfoI | RGCGCY | 1 cut(s) | 1515 |
| BfrI | CTTAAG | 1 cut(s) | 2021 |
| BfuAI | ACCTGC | 1 cut(s) | 1050 |
| BfuI | GTATCC | 1 cut(s) | 997 |
| BglII | AGATCT | 2 cut(s) | 385, 2056 |
| Bme1390I | CCNGG | 3 cut(s) | 161, 557, 2376 |
| Bme18I | GGWCC | 3 cut(s) | 157, 200, 563 |
| BmeT110I | CYCGRG | 1 cut(s) | 1846 |
| BmgT120I | GGNCC | 6 cut(s) | 49, 50, 157, 200, 563, 1328 |
| BmiI | GGNNCC | 3 cut(s) | 51, 1383, 1633 |
| BmrFI | CCNGG | 3 cut(s) | 161, 557, 2376 |
| BmsI | GCATC | 6 cut(s) | 811, 856, 857, 976, 1651, 2283 |
| BpiI | GAAGAC | 3 cut(s) | 779, 2174, 2338 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 55, 87, 69, 101 |
| BpmI | CTGGAG | 2 cut(s) | 1455, 2273 |
| BpuEI | CTTGAG | 2 cut(s) | 1898, 2526 |
| BpuMI | CCSGG | 1 cut(s) | 161 |
| Bsa29I | ATCGAT | 1 cut(s) | 2748 |
| BsaAI | YACGTR | 1 cut(s) | 1814 |
| BsaBI | GATNNNNATC | 2 cut(s) | 514, 2550 |
| BsaHI | GRCGYC | 1 cut(s) | 2506 |
| BsaI | GGTCTC | 1 cut(s) | 1914 |
| BsaJI | CCNNGG | 4 cut(s) | 153, 556, 1491, 1935 |
| BsaWI | WCCGGW | 2 cut(s) | 1642, 2349 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 159, 358, 1563, 1657, 1699, 2473, 2524 |
| Bse1I | ACTGG | 4 cut(s) | 121, 342, 1084, 1330 |
| Bse3DI | GCAATG | 2 cut(s) | 652, 1408 |
| Bse8I | GATNNNNATC | 2 cut(s) | 514, 2550 |
| BseAI | TCCGGA | 1 cut(s) | 2349 |
| BseBI | CCWGG | 2 cut(s) | 557, 2376 |
| BseCI | ATCGAT | 1 cut(s) | 2748 |
| BseDI | CCNNGG | 4 cut(s) | 153, 556, 1491, 1935 |
| BseGI | GGATG | 2 cut(s) | 1666, 2533 |
| BseJI | GATNNNNATC | 2 cut(s) | 514, 2550 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 159, 358, 1563, 1657, 1699, 2473, 2524 |
| BseMI | GCAATG | 2 cut(s) | 652, 1408 |
| BseMII | CTCAG | 5 cut(s) | 86, 491, 564, 1475, 2270 |
| BseNI | ACTGG | 4 cut(s) | 121, 342, 1084, 1330 |
| BseRI | GAGGAG | 2 cut(s) | 119, 2240 |
| BseSI | GKGCMC | 3 cut(s) | 53, 166, 1930 |
| BseYI | CCCAGC | 1 cut(s) | 46 |
| BshFI | GGCC | 4 cut(s) | 51, 555, 1329, 2122 |
| BshNI | GGYRCC | 1 cut(s) | 1631 |
| BshVI | ATCGAT | 1 cut(s) | 2748 |
| BsiHKAI | GWGCWC | 6 cut(s) | 87, 579, 604, 1571, 1930, 2615 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1846 |
| BsiSI | CCGG | 3 cut(s) | 160, 1643, 2350 |
| BslFI | GGGAC | 4 cut(s) | 109, 624, 844, 2228 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 159, 358, 1563, 1657, 1699, 2473, 2524 |
| BsmAI | GTCTC | 7 cut(s) | 75, 496, 1203, 1321, 1348, 1846, 1914 |
| BsmBI | CGTCTC | 2 cut(s) | 75, 1348 |
| BsmFI | GGGAC | 4 cut(s) | 109, 624, 844, 2228 |
| BsmI | GAATGC | 2 cut(s) | 835, 2364 |
| BsnI | GGCC | 4 cut(s) | 51, 555, 1329, 2122 |
| Bso31I | GGTCTC | 1 cut(s) | 1914 |
| BsoBI | CYCGRG | 1 cut(s) | 1846 |
| Bsp120I | GGGCCC | 1 cut(s) | 49 |
| Bsp13I | TCCGGA | 1 cut(s) | 2349 |
| Bsp1407I | TGTACA | 2 cut(s) | 964, 1152 |
| Bsp19I | CCATGG | 1 cut(s) | 1935 |
| BspACI | CCGC | 8 cut(s) | 59, 140, 203, 359, 682, 1261, 1552, 1628 |
| BspANI | GGCC | 4 cut(s) | 51, 555, 1329, 2122 |
| BspCNI | CTCAG | 5 cut(s) | 85, 492, 565, 1476, 2269 |
| BspDI | ATCGAT | 1 cut(s) | 2748 |
| BspEI | TCCGGA | 1 cut(s) | 2349 |
| BspHI | TCATGA | 3 cut(s) | 889, 2328, 2625 |
| BspLI | GGNNCC | 3 cut(s) | 51, 1383, 1633 |
| BspMAI | CTGCAG | 3 cut(s) | 1047, 1117, 1539 |
| BspMI | ACCTGC | 1 cut(s) | 1050 |
| BspPI | GGATC | 4 cut(s) | 911, 1279, 1449, 2141 |
| BspT107I | GGYRCC | 1 cut(s) | 1631 |
| BspTI | CTTAAG | 1 cut(s) | 2021 |
| BspTNI | GGTCTC | 1 cut(s) | 1914 |
| BsrBI | CCGCTC | 1 cut(s) | 1554 |
| BsrDI | GCAATG | 2 cut(s) | 652, 1408 |
| BsrGI | TGTACA | 2 cut(s) | 964, 1152 |
| BsrI | ACTGG | 4 cut(s) | 121, 342, 1084, 1330 |
| BssECI | CCNNGG | 4 cut(s) | 153, 556, 1491, 1935 |
| BssNI | GRCGYC | 1 cut(s) | 2506 |
| BssSI | CACGAG | 1 cut(s) | 452 |
| BssT1I | CCWWGG | 2 cut(s) | 1491, 1935 |
| Bst2BI | CACGAG | 1 cut(s) | 452 |
| Bst2UI | CCWGG | 2 cut(s) | 557, 2376 |
| Bst4CI | ACNGT | 6 cut(s) | 731, 1864, 2269, 2344, 2664, 2730 |
| Bst6I | CTCTTC | 4 cut(s) | 322, 376, 1623, 1916 |
| BstACI | GRCGYC | 1 cut(s) | 2506 |
| BstAFI | CTTAAG | 1 cut(s) | 2021 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1676 |
| BstAUI | TGTACA | 2 cut(s) | 964, 1152 |
| BstBAI | YACGTR | 1 cut(s) | 1814 |
| BstC8I | GCNNGC | 8 cut(s) | 24, 93, 553, 618, 954, 1247, 2689, 2716 |
| BstDEI | CTNAG | 8 cut(s) | 72, 500, 573, 743, 1250, 1484, 2060, 2256 |
| BstDSI | CCRYGG | 1 cut(s) | 1935 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1697 |
| BstF5I | GGATG | 2 cut(s) | 1666, 2533 |
| BstH2I | RGCGCY | 1 cut(s) | 1515 |
| BstHHI | GCGC | 2 cut(s) | 351, 1514 |
| BstMAI | GTCTC | 7 cut(s) | 75, 496, 1203, 1321, 1348, 1846, 1914 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 13, 211, 830, 995, 1676 |
| BstNI | CCWGG | 2 cut(s) | 557, 2376 |
| BstNSI | RCATGY | 3 cut(s) | 620, 1249, 2742 |
| BstSCI | CCNGG | 3 cut(s) | 159, 555, 2374 |
| BstSFI | CTRYAG | 3 cut(s) | 1043, 1113, 1535 |
| BstSLI | GKGCMC | 3 cut(s) | 53, 166, 1930 |
| BstSNI | TACGTA | 1 cut(s) | 1814 |
| BstV2I | GAAGAC | 3 cut(s) | 779, 2174, 2338 |
| BstX2I | RGATCY | 3 cut(s) | 385, 2056, 2146 |
| BstYI | RGATCY | 3 cut(s) | 385, 2056, 2146 |
| Bsu15I | ATCGAT | 1 cut(s) | 2748 |
| BsuI | GTATCC | 1 cut(s) | 997 |
| BsuRI | GGCC | 4 cut(s) | 51, 555, 1329, 2122 |
| BsuTUI | ATCGAT | 1 cut(s) | 2748 |
| BtgI | CCRYGG | 1 cut(s) | 1935 |
| BtsCI | GGATG | 2 cut(s) | 1666, 2533 |
| BtsI | GCAGTG | 1 cut(s) | 2615 |
| BtsIMutI | CAGTG | 4 cut(s) | 335, 372, 736, 2615 |
| BveI | ACCTGC | 1 cut(s) | 1050 |
| Cac8I | GCNNGC | 8 cut(s) | 24, 93, 553, 618, 954, 1247, 2689, 2716 |
| CaiI | CAGNNNCTG | 3 cut(s) | 839, 2524, 2668 |
| CciI | TCATGA | 3 cut(s) | 889, 2328, 2625 |
| CfoI | GCGC | 2 cut(s) | 351, 1514 |
| Cfr13I | GGNCC | 6 cut(s) | 49, 50, 157, 200, 563, 1328 |
| ClaI | ATCGAT | 1 cut(s) | 2748 |
| CpoI | CGGWCCG | 1 cut(s) | 157 |
| CseI | GACGC | 2 cut(s) | 271, 2495 |
| Csp6I | GTAC | 8 cut(s) | 370, 425, 836, 965, 1153, 1258, 1488, 2660 |
| CspI | CGGWCCG | 1 cut(s) | 157 |
| CviQI | GTAC | 8 cut(s) | 370, 425, 836, 965, 1153, 1258, 1488, 2660 |
| DdeI | CTNAG | 8 cut(s) | 72, 500, 573, 743, 1250, 1484, 2060, 2256 |
| DraI | TTTAAA | 2 cut(s) | 723, 1609 |
| Eam1104I | CTCTTC | 4 cut(s) | 322, 376, 1623, 1916 |
| EarI | CTCTTC | 4 cut(s) | 322, 376, 1623, 1916 |
| EciI | GGCGGA | 1 cut(s) | 129 |
| Ecl136II | GAGCTC | 1 cut(s) | 85 |
| Eco105I | TACGTA | 1 cut(s) | 1814 |
| Eco130I | CCWWGG | 2 cut(s) | 1491, 1935 |
| Eco24I | GRGCYC | 4 cut(s) | 53, 68, 87, 366 |
| Eco31I | GGTCTC | 1 cut(s) | 1914 |
| Eco32I | GATATC | 1 cut(s) | 516 |
| Eco47I | GGWCC | 3 cut(s) | 157, 200, 563 |
| Eco53kI | GAGCTC | 1 cut(s) | 85 |
| Eco57I | CTGAAG | 2 cut(s) | 2067, 2168 |
| Eco88I | CYCGRG | 1 cut(s) | 1846 |
| EcoICRI | GAGCTC | 1 cut(s) | 85 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1697 |
| EcoRI | GAATTC | 1 cut(s) | 1646 |
| EcoRII | CCWGG | 2 cut(s) | 555, 2374 |
| EcoRV | GATATC | 1 cut(s) | 516 |
| EcoT14I | CCWWGG | 2 cut(s) | 1491, 1935 |
| EcoT38I | GRGCYC | 4 cut(s) | 53, 68, 87, 366 |
| ErhI | CCWWGG | 2 cut(s) | 1491, 1935 |
| Esp3I | CGTCTC | 2 cut(s) | 75, 1348 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 174, 206, 940, 972 |
| FaqI | GGGAC | 4 cut(s) | 109, 624, 844, 2228 |
| FauI | CCCGC | 2 cut(s) | 352, 1621 |
| FauNDI | CATATG | 1 cut(s) | 2196 |
| FbaI | TGATCA | 2 cut(s) | 430, 1176 |
| FokI | GGATG | 2 cut(s) | 1673, 2540 |
| FriOI | GRGCYC | 4 cut(s) | 53, 68, 87, 366 |
| FspBI | CTAG | 6 cut(s) | 587, 594, 630, 1500, 2657, 2720 |
| GlaI | GCGC | 2 cut(s) | 350, 1513 |
| GsaI | CCCAGC | 1 cut(s) | 50 |
| GsuI | CTGGAG | 2 cut(s) | 1455, 2273 |
| HaeII | RGCGCY | 1 cut(s) | 1515 |
| HaeIII | GGCC | 4 cut(s) | 51, 555, 1329, 2122 |
| HapII | CCGG | 3 cut(s) | 160, 1643, 2350 |
| HgaI | GACGC | 2 cut(s) | 271, 2495 |
| HhaI | GCGC | 2 cut(s) | 351, 1514 |
| Hin1I | GRCGYC | 1 cut(s) | 2506 |
| Hin6I | GCGC | 2 cut(s) | 349, 1512 |
| HinP1I | GCGC | 2 cut(s) | 349, 1512 |
| HinfI | GANTC | 5 cut(s) | 35, 590, 1223, 2079, 2206 |
| HpaII | CCGG | 3 cut(s) | 160, 1643, 2350 |
| HphI | GGTGA | 2 cut(s) | 814, 1187 |
| Hpy166II | GTNNAC | 4 cut(s) | 372, 967, 1416, 1928 |
| Hpy8I | GTNNAC | 4 cut(s) | 372, 967, 1416, 1928 |
| Hpy99I | CGWCG | 1 cut(s) | 58 |
| HpyAV | CCTTC | 7 cut(s) | 127, 1348, 1372, 1703, 1795, 2013, 2473 |
| HpyCH4III | ACNGT | 6 cut(s) | 731, 1864, 2269, 2344, 2664, 2730 |
| HpyCH4IV | ACGT | 3 cut(s) | 769, 924, 1813 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 13, 211, 830, 995, 1676 |
| HpyF3I | CTNAG | 8 cut(s) | 72, 500, 573, 743, 1250, 1484, 2060, 2256 |
| HpySE526I | ACGT | 3 cut(s) | 769, 924, 1813 |
| Hsp92I | GRCGYC | 1 cut(s) | 2506 |
| HspAI | GCGC | 2 cut(s) | 349, 1512 |
| Kpn2I | TCCGGA | 1 cut(s) | 2349 |
| Ksp22I | TGATCA | 2 cut(s) | 430, 1176 |
| LmnI | GCTCC | 3 cut(s) | 82, 1559, 1566 |
| LweI | GCATC | 6 cut(s) | 811, 856, 857, 976, 1651, 2283 |
| MaeI | CTAG | 6 cut(s) | 587, 594, 630, 1500, 2657, 2720 |
| MaeII | ACGT | 3 cut(s) | 769, 924, 1813 |
| MaeIII | GTNAC | 8 cut(s) | 251, 746, 898, 1037, 1295, 1530, 2269, 2664 |
| MbiI | CCGCTC | 1 cut(s) | 1554 |
| MfeI | CAATTG | 1 cut(s) | 1735 |
| MflI | RGATCY | 3 cut(s) | 385, 2056, 2146 |
| MlyI | GAGTC | 1 cut(s) | 2215 |
| MroI | TCCGGA | 1 cut(s) | 2349 |
| MseI | TTAA | 8 cut(s) | 392, 534, 722, 977, 1301, 1608, 2022, 2636 |
| MslI | CAYNNNNRTG | 1 cut(s) | 267 |
| MspA1I | CMGCKG | 3 cut(s) | 19, 359, 551 |
| MspCI | CTTAAG | 1 cut(s) | 2021 |
| MspI | CCGG | 3 cut(s) | 160, 1643, 2350 |
| MspR9I | CCNGG | 3 cut(s) | 161, 557, 2376 |
| MunI | CAATTG | 1 cut(s) | 1735 |
| Mva1269I | GAATGC | 2 cut(s) | 835, 2364 |
| MvaI | CCWGG | 2 cut(s) | 557, 2376 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 13, 211, 830, 995, 1676 |
| NciI | CCSGG | 1 cut(s) | 161 |
| NcoI | CCATGG | 1 cut(s) | 1935 |
| NdeI | CATATG | 1 cut(s) | 2196 |
| NlaIV | GGNNCC | 3 cut(s) | 51, 1383, 1633 |
| NmeAIII | GCCGAG | 1 cut(s) | 87 |
| NmuCI | GTSAC | 2 cut(s) | 251, 746 |
| NspI | RCATGY | 3 cut(s) | 620, 1249, 2742 |
| PaeI | GCATGC | 2 cut(s) | 620, 1249 |
| PagI | TCATGA | 3 cut(s) | 889, 2328, 2625 |
| PctI | GAATGC | 2 cut(s) | 835, 2364 |
| PfeI | GAWTC | 4 cut(s) | 35, 590, 1223, 2079 |
| PflFI | GACNNNGTC | 1 cut(s) | 281 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2524 |
| PleI | GAGTC | 1 cut(s) | 2214 |
| PpsI | GAGTC | 1 cut(s) | 2214 |
| Ppu21I | YACGTR | 1 cut(s) | 1814 |
| PsiI | TTATAA | 2 cut(s) | 524, 2462 |
| Psp124BI | GAGCTC | 1 cut(s) | 87 |
| Psp1406I | AACGTT | 1 cut(s) | 924 |
| Psp6I | CCWGG | 2 cut(s) | 555, 2374 |
| PspFI | CCCAGC | 1 cut(s) | 46 |
| PspGI | CCWGG | 2 cut(s) | 555, 2374 |
| PspN4I | GGNNCC | 3 cut(s) | 51, 1383, 1633 |
| PspOMI | GGGCCC | 1 cut(s) | 49 |
| PspPI | GGNCC | 6 cut(s) | 49, 50, 157, 200, 563, 1328 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2623, 2655 |
| PstI | CTGCAG | 3 cut(s) | 1047, 1117, 1539 |
| PstNI | CAGNNNCTG | 3 cut(s) | 839, 2524, 2668 |
| PsuI | RGATCY | 3 cut(s) | 385, 2056, 2146 |
| PsyI | GACNNNGTC | 1 cut(s) | 281 |
| PvuII | CAGCTG | 2 cut(s) | 19, 551 |
| RsaI | GTAC | 8 cut(s) | 371, 426, 837, 966, 1154, 1259, 1489, 2661 |
| RsaNI | GTAC | 8 cut(s) | 370, 425, 836, 965, 1153, 1258, 1488, 2660 |
| RseI | CAYNNNNRTG | 1 cut(s) | 267 |
| Rsr2I | CGGWCCG | 1 cut(s) | 157 |
| RsrII | CGGWCCG | 1 cut(s) | 157 |
| SacI | GAGCTC | 1 cut(s) | 87 |
| SaqAI | TTAA | 8 cut(s) | 392, 534, 722, 977, 1301, 1608, 2022, 2636 |
| Sau96I | GGNCC | 6 cut(s) | 49, 50, 157, 200, 563, 1328 |
| SchI | GAGTC | 1 cut(s) | 2215 |
| ScrFI | CCNGG | 3 cut(s) | 161, 557, 2376 |
| SfaNI | GCATC | 6 cut(s) | 811, 856, 857, 976, 1651, 2283 |
| SfcI | CTRYAG | 3 cut(s) | 1043, 1113, 1535 |
| SinI | GGWCC | 3 cut(s) | 157, 200, 563 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 267 |
| SmlI | CTYRAG | 3 cut(s) | 1877, 2021, 2541 |
| SmoI | CTYRAG | 3 cut(s) | 1877, 2021, 2541 |
| SnaBI | TACGTA | 1 cut(s) | 1814 |
| SphI | GCATGC | 2 cut(s) | 620, 1249 |
| SsiI | CCGC | 8 cut(s) | 59, 140, 203, 359, 682, 1261, 1552, 1628 |
| SspMI | CTAG | 6 cut(s) | 587, 594, 630, 1500, 2657, 2720 |
| SstI | GAGCTC | 1 cut(s) | 87 |
| StyD4I | CCNGG | 3 cut(s) | 159, 555, 2374 |
| StyI | CCWWGG | 2 cut(s) | 1491, 1935 |
| TaaI | ACNGT | 6 cut(s) | 731, 1864, 2269, 2344, 2664, 2730 |
| TaiI | ACGT | 3 cut(s) | 772, 927, 1816 |
| TaqI | TCGA | 4 cut(s) | 33, 538, 877, 2748 |
| TatI | WGTACW | 4 cut(s) | 424, 964, 1152, 2659 |
| TauI | GCSGC | 1 cut(s) | 61 |
| TfiI | GAWTC | 4 cut(s) | 35, 590, 1223, 2079 |
| Tru1I | TTAA | 8 cut(s) | 392, 534, 722, 977, 1301, 1608, 2022, 2636 |
| Tru9I | TTAA | 8 cut(s) | 392, 534, 722, 977, 1301, 1608, 2022, 2636 |
| TscAI | CASTG | 4 cut(s) | 342, 379, 736, 2615 |
| TseFI | GTSAC | 2 cut(s) | 251, 746 |
| Tsp45I | GTSAC | 2 cut(s) | 251, 746 |
| TspGWI | ACGGA | 5 cut(s) | 275, 1245, 1546, 1728, 2416 |
| TspRI | CASTG | 4 cut(s) | 342, 379, 736, 2615 |
| Tth111I | GACNNNGTC | 1 cut(s) | 281 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2524 |
| Vha464I | CTTAAG | 1 cut(s) | 2021 |
| VneI | GTGCAC | 1 cut(s) | 1926 |
| VpaK11BI | GGWCC | 3 cut(s) | 157, 200, 563 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1697 |
| XapI | RAATTY | 9 cut(s) | 342, 884, 1368, 1426, 1450, 1604, 1646, 2556, 2601 |
| XbaI | TCTAGA | 2 cut(s) | 586, 593 |
| XceI | RCATGY | 3 cut(s) | 620, 1249, 2742 |
| XspI | CTAG | 6 cut(s) | 587, 594, 630, 1500, 2657, 2720 |